Sed0002358 (gene) Chayote v1

Overview
NameSed0002358
Typegene
OrganismSechium edule (Chayote v1)
DescriptionLipoxygenase
LocationLG11: 3218320 .. 3224262 (+)
RNA-Seq ExpressionSed0002358
SyntenySed0002358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCCAATTTGATTAAATTTTTTTGGGATCACCGGCATCATTTTAATCGTGTGGTTGAGAGGATTGCTCGCACTTTAGTCGCATGGTATGTGTAGCTTTATTTTCTTTTCTCTTCTTATTGTCTATAAAAAATGTGAATTTTGGTACATTTTTCATCATTTCACATGTGCTTAAAATTTAGGGAAAACTGTACAAACCACCCCTAAGGCCTAAACTATGTGGTTTGTAACAACTACCCTCATAAACTTCTAATTTGATCAATTACCTCTGTAAAGTTTTGTGAGTGTTGCAATTAAACACTTGGTTTATATGTACCATTCATATCTGCCACCCACCAAAGAATTAGTGAACTATGTAAATTTATGTGTGTTCTTATTTCTTCTTCTTTTGCATTTATCGTATTCGTTTCTTTGTTTCTTTATTTTTGTTCTTCTTCGTTTCACGATTGTTGATTGCTGGCAAAAGCTCACTTTATGTAGCTTAGAGTCTTAGAAAAATAGAACAACTTTTTTTTTTTTATGTTCTGCCTAGAATTTTAAAAAATTAAAGCAACCAAAGAAATAGAAATGGTCATATAAAAAAAGACTTGTGGAGCATAACTGAAGGAAATATATTTTTTAATTAGTGGTATGAGTGGGTTAAATCCTGACCGGCCCAATTATCAATCCATCCAACTATACAAGTGAGTTCCAGGTAGAGTTTGATTGTTGTAACAAGTAAATTTATAAAATCATTTTGAACTAAACTTAGGATGGTTGTCTTTTTCAAAGTAGATCACTGAGTTTTCAACACTTGCTCGGGGTTTTGGACTTGATTCCAATCACTCAACTCCGGTCATTGTTTTTAGCCTTTTTTTCCAAATCCAATTGCTCCACATGTTTCCATTATTAAATTTAATTTTTTTGGGGTCTTTGTTCTGCTCATGTCCTAGTTTATGTTGTATGAATTAAGGTTTTTCGATGTCTGATTCCAATCACTCAACCCAAATATAAACACTTGAATGGATTGGACATTTTTTTAACTAAACTTTTCCTAAGATGAACAAAGATGCTTGAGCTTTTTTTTTCACTGCCTTTATTTAGATGTAAATGCATTTTATCGATGAAATGGTTGCATTTTTCTTCTTAGTAATTTATTAATCACATTTTTCTTCTTAGTAATTTATTAAAAGCATGAAGCTACAAGCTAGTATTGTTTTGGAATGTTAGTGTATCTCGATAAACATTTTAAATTTTGAAAATGTAGATTCTAGTTTGTTTGCACTAGCTTTTCTTTGAGAGAGTCTTTAGTTTTTATGTACATGATAAATATTGGTATTTGGAATATTCTTGGGTTTTGGTCGCTTCTTCTAGACCCTATGATTCTCTTATTGGTTATTCTCATGCTTTGTTCGTACTTACTAATAGTTTAAATGAATAGTTTATCTCCATGTGTTTTATGTTAAGAAGTTTTGTCAAATTTTTTAATTCAGTTGGTTTATATGTTCATGGTTGATTGATAAGCTTTACTTGTTTACAGATATCTTTAAATAGGCGCTTTCGACATGTAGGGAAAGGGAAGACGAGATGGATCGAAAGTGGATCGACTTCACCAAAAACTTCAAGTTTGAGAGGTCGTTCATCTTTTTCCTTGAACGTTCAAGTTAACTTAAACCCCAACTCTTTGTTTTTTCCTTTCTTTATCTTTTTTGTTCATTTTTGCAACTACAACTGATTTCTATTTCAATCACGTTTAGATTTGAACTTAGACATTGCTTCTTTTACCAAAAATTTGGATTTATTCAGTTTTAGGATTTAAGAACGTTGCGATAATTCTCGTAAATCTCTTTATAGCTTTAACTTTTCTATATTATATATTTATATTCTCTATTGCAATTTCTAATTTAAAACTTTATTACTATATTGTGCAGGTATGTTGTTCAAGGTGAGGAACATTTGCATCTACAGACCCCGTATATTTCGAGGGATAACAGACCATGCTTCTTTGTTATATTGTAAATTTTCTAGTTTTCAAACTCCTTGTAGATATTTTAAGAATTATAAGTTTATTGATATTGATTTTTTTTATGTCCAAGTGTAATGTACAAATTATTTAGTCATATATGCAATAATATTTGTTGAATAAGATTTCTGGGCTGCACAGTATAAATCTTTTTTGACGATAAATATACACAAACAAAACAGGTTGTAAATAGACATAAAAAAGTATCATGAAACTAATAAATTGACATAAATAAATAGTTATATTACATAAATTGATGACTATAAAAAAGTGTCAATATATAAGCTAAAATGACAATATTAACATGTCGTTAATACTTCTTCAATGATTATATATATGTGTCATTAATGGTTCAACTATGACTAAAATAAGATGTCATAAATGACTCAATCATGACTATGTATATGTGTCATTAATAAATTAACTCTGACTATAATAAAATGTCATAACTGGTAATATGATGACACTTTTAAATTGTCGTAATTACTTCATCAATGACTCAGTATATGTGTCATTAATGGTTCATCTATGACTATAATATAGTGTCATTATTAATTCTACCATGACACTTTTACTATAGTGTCATGGTTGAACCTTCCGTGACAGCGGATACAATGACTCTTGATTTTAGTCATGGAAGGTGTTTATGACTATAAATTATAGTCATGGAATGAGCTTTTTGTAGTAGTGAATTACTTAATCATATTAAATAACGTGCATATGTTGAAGTATTTGAAACTTAAATGAATATTCCATCTAAAAATGTGGATGTGAGTTTAAAAAATAATGAATTCAAAGAGCACAATCTTCAAAAGCATGTTGAAGATTGTACATCGAAAAGATAAGGAGAAACATAACAATTTATATGATATATGAGATACTGTTCTCATAACTAATTAATAATTAATTGAGATATGACGTCATGTTATCTAATAACTTTAAGATTTGAGTGGATGTTGGGGGCTCGAAACCTTAGAACAATACTTTCGAGTGTCGAGGTTGCTAACCTTTGTAGTCACTTTTTTTAGTAGAGAAATATTTACATCATGCCTAGGCATGATGTATACAATAATGCCCACCTATGTGGCCCAATAATGGGCCACAATCTATTTTTCTTTATTTTCTTTCCTTTATCTTTTAAATTTAAAATCAAATAGATTGTGGTTCATATCAAACCACACACGGGTGGACATCAAATTATAGGGCATGATGTAAATATTCCTCTTTTTAGTAGGCAAATCACTATCAAAGCCAAGTAAAGGCTGAATCAATAAAGGGAGTTACTAAAACTTTGAGTGGATGGAGGAGTGTAAGTAAAGGCTTTTAAGCAATTAAAAGTTATCTGAGCTCTTCTCCCCTCCTCTCCAAACTAGTCCTAGGTTTTAAAATGAAGCGCAAAAATTGTAAGGGAAAGAGATATAGAAAGGAATAAAAAAAACACTAAAACAAGCCTACCTCTTTATTAACTAGTGCTAGATAAAGATTGGTAATAGCATTCGTATCTATCTCGTTCCATTTATCATCGATCTGTGATGTCCGTCGGCCTACCACTGATGGCTGGAAGACAATTATCTTTTCTCAAGATAGCTTTCATCTCCATCTTCCACAACGAGAAATTAGTCTCGTTGAACTTTTCGATCTTTGATCCTTGTCATTATCGCTTCTATTATGAATGGTAAATAATCCACTTGTCTTTCAATAAAGGTGAAAATTATCGAACTTATTTTCTTATGTAGATGATTCTTTTCCACCGCAACCCCAGCATATTACTATAATTAGATATTTATGTAAAAAAATAAATTCGAATAATAAAACACAAATAACAATCGCGCAAGGTTTTTCATCCGGATTGGAGAGACAATATACGCAACAATTTTTCCAAGAACACTTTCTTTTATTTCTAAAAAAACTCTCTCTACAGGTTTCACATCCTTTCTCTCTAAAACTCTCTATATTTGATCTCACATTTTCTCCACAATTCATAATGAAGGAACACTCTATTAATAGTCTATTACAAAATTCTTCTCCAAGTTCTTTCCATGAATATCTTTCCCATAATTTCTAAATTAAGGATCTACTAATTCCTTAATTACCTCCTAAATTGACACCGCATTTATTCCTTAATTGTCTACCCACTTATAATTTCCTCAATTAACAATTATTTCAAGTATATTAAAATTTATCCAACAATTTACATCTAAACCCAGGTTCTAATACCATTTCTTGTGATTGTTTGAATCGTATAGAGTAGTGTCACAACTATAAGAGATTGAGAACAATAATAATAATGAAGAAGAGGAAGAAGGACGCACATAATTATGGTAAAAACAATAGGCAATGATAAAAGAACATCGCTATAAAAATAAGAGTTACAAACTTTTTCTCTTATAGAGTAGCAACAAACTCTCTCTATTTTTATCTCACACTCTCACTCACCTACACATGGGATGTCTTGGAAAATTTTGGGATGTTTTACCAAAAATGGACCCTCTCTCTATTTTTATCTCACACTCTCACTCACCTACACATGGGATGTCTTGGAAAATTTTGGGATGTTTTACCAAAAACAGACCCTAACCTATTTATAATCCACATAAACTTAGGCTCTTAGTAAATCTTGTGGTCATAAATTGATCACATCTTACCTTAGTGATCAAGCAAATCATGTGCATTGTTTCAATTTTCAATTTTTCTATAATTTTTCTACTACTTCACTTTAGACAATATACATGATCTAGATCATTCTTTTATCAATTAGACAAAGAGTGTTATAGAATTCTTTTCATCAATCATAGACGAATATATATGATCTAGAATAATCTTCCTCGACTATCTAGGAGAATAGTGCAGGACCTAGAGTTATTATTTAACAATTAGGAAAGAATATATACGCAAACTTTTGTAATACAATAATTACATCAATCACAAAAAATGTTGACAACAAGTTGTAAAATACCTAAACAAATTTAAAACACTTCTATAAACTGGTAAACATAAGTAATAATTATAAAAACTAAATTCAAATAACAAAATAATAAACACAAAGAAACAATCGTTAAACTTTTCGATTTGGGATTGGAGAGACAATGTGCACAAACTTTTTTTATAACACTTTTCTTTATTTCACTGAAATTCTCTCTTCAGATTTTTCGCTTTTTCTCTAACATTTTTTCTTGCTTTTTTCTACAATTTTCTCTAGGATTCACAACGAAGAAACACTCTACTTATAGCCTATTATAAATTTGGCTTCCAAGTTCTTATAAAACATGCTTTCCACTAATTCCTAAATAAGGATTTACTAATCCCTTAATTAGCTCCTAAATTGACAATTCATTAATTCCTTAATTGTATACTCATTAATTTCTTTAATTAACAATTATTTCAACTATATTTAAGTTTATTCCAACAAAACACCACAAGTCCTAATAACCGTATTAAAAAATTATTAATTAATTAATTATCAAATAATAATCTCACGAAGTTACTTACAAAAACAAATATTATACTATTACTAAAGAGTGATTCATACCTATATTTATTCGATCATTCTTGTATACACAAGAATCGGTAAAGCATCTCGTAAATATGTACAATTCCATTCACATTTGAAAATGTTTTCATTCCAATCATAATTAAGTTATTCATTTGAATCGTGATATCTAGTTGTATAATTTTTATAGGCATATCTTCCAAATCAAACACCAGAGCTGCTATGCAAATATAGAGAAGATGAGCTCGAAATTTTGAGAGGAGATGGAACAGGAAAGAGGTCAAAAAAAGAAAGAATATATGATTATGATGTCTACAATGATCTCGGATACGATCGTCCCATTCTTGGAGGCTCCAACGAATATCCTTATCCACGTCGAGGAAGAACGGGACGCAAACCTTTATCACAAGGCAAAAATTACTTCAACTGCTATATAATATGTTCTTAA

mRNA sequence

ATGAGTTCCAATTTGATTAAATTTTTTTGGGATCACCGGCATCATTTTAATCGTGTGGTTGAGAGGATTGCTCGCACTTTAGTCGCATGGCGCTTTCGACATGTAGGGAAAGGGAAGACGAGATGGATCGAAAGTGGATCGACTTCACCAAAAACTTCAAGTTTGAGAGGTCGTTCATCTTTTTCCTTGAACGTTCAAGCATATCTTCCAAATCAAACACCAGAGCTGCTATGCAAATATAGAGAAGATGAGCTCGAAATTTTGAGAGGAGATGGAACAGGAAAGAGGTCAAAAAAAGAAAGAATATATGATTATGATGTCTACAATGATCTCGGATACGATCGTCCCATTCTTGGAGGCTCCAACGAATATCCTTATCCACGTCGAGGAAGAACGGGACGCAAACCTTTATCACAAGGCAAAAATTACTTCAACTGCTATATAATATGTTCTTAA

Coding sequence (CDS)

ATGAGTTCCAATTTGATTAAATTTTTTTGGGATCACCGGCATCATTTTAATCGTGTGGTTGAGAGGATTGCTCGCACTTTAGTCGCATGGCGCTTTCGACATGTAGGGAAAGGGAAGACGAGATGGATCGAAAGTGGATCGACTTCACCAAAAACTTCAAGTTTGAGAGGTCGTTCATCTTTTTCCTTGAACGTTCAAGCATATCTTCCAAATCAAACACCAGAGCTGCTATGCAAATATAGAGAAGATGAGCTCGAAATTTTGAGAGGAGATGGAACAGGAAAGAGGTCAAAAAAAGAAAGAATATATGATTATGATGTCTACAATGATCTCGGATACGATCGTCCCATTCTTGGAGGCTCCAACGAATATCCTTATCCACGTCGAGGAAGAACGGGACGCAAACCTTTATCACAAGGCAAAAATTACTTCAACTGCTATATAATATGTTCTTAA

Protein sequence

MSSNLIKFFWDHRHHFNRVVERIARTLVAWRFRHVGKGKTRWIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYPYPRRGRTGRKPLSQGKNYFNCYIICS
Homology
[Close]
BLAST of Sed0002358 vs. NCBI nr
Match: KAA0047992.1 (putative linoleate 9S-lipoxygenase 5 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-23
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+L
Sbjct: 77  KAYIPNETPEPLRKYREDELKNLRGDGTGERQEWDRIYDYDVYNDLEDPSSDSTYVRPVL 136

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGS +YPYPRRGRTGR P  + KNY
Sbjct: 137 GGSTQYPYPRRGRTGRSPSKKDKNY 161

[Close]
BLAST of Sed0002358 vs. NCBI nr
Match: XP_008454500.1 (PREDICTED: probable linoleate 9S-lipoxygenase 5 [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-23
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+L
Sbjct: 160 KAYIPNETPEPLRKYREDELKNLRGDGTGERQEWDRIYDYDVYNDLEDPSSDSTYVRPVL 219

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGS +YPYPRRGRTGR P  + KNY
Sbjct: 220 GGSTQYPYPRRGRTGRSPSKKDKNY 244

[Close]
BLAST of Sed0002358 vs. NCBI nr
Match: KAE8652023.1 (hypothetical protein Csa_023391 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 8.6e-22
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AY+PN+TPE L KYR+DEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+L
Sbjct: 162 KAYIPNETPEPLRKYRQDELKNLRGDGTGERQEWDRIYDYDVYNDLEDPSSGSTYIRPVL 221

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGS +YPYPRRGRTGR P  + K Y
Sbjct: 222 GGSTQYPYPRRGRTGRSPSKKDKKY 246

[Close]
BLAST of Sed0002358 vs. NCBI nr
Match: XP_004139356.1 (probable linoleate 9S-lipoxygenase 5 [Cucumis sativus] >KAE8651605.1 hypothetical protein Csa_021161 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 8.6e-22
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AY+PN+TPE L KYR+DEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+L
Sbjct: 162 KAYIPNETPEPLRKYRQDELKNLRGDGTGERQEWDRIYDYDVYNDLEDPSSGSTYIRPVL 221

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGS +YPYPRRGRTGR P  + K Y
Sbjct: 222 GGSTQYPYPRRGRTGRSPSKKDKKY 246

[Close]
BLAST of Sed0002358 vs. NCBI nr
Match: XP_022150808.1 (probable linoleate 9S-lipoxygenase 5 [Momordica charantia])

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AYLPN+TPE L KYRE+EL+ LRGD TG+R + +RIYDYDVYNDL        Y RPIL
Sbjct: 161 KAYLPNETPEPLRKYREEELKNLRGDETGERQEWDRIYDYDVYNDLEDPDSDSTYIRPIL 220

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGSN+YPYPRRGRTGR P  + K Y
Sbjct: 221 GGSNQYPYPRRGRTGRAPSKKDKKY 245

[Close]
BLAST of Sed0002358 vs. ExPASy Swiss-Prot
Match: P09918 (Seed linoleate 9S-lipoxygenase-3 OS=Pisum sativum OX=3888 GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPIL 125
           Q YLP++TP  L  YRE+EL  LRGDGTG+R + ERIYDYDVYNDLG       + RP+L
Sbjct: 168 QTYLPSETPAPLVHYREEELNNLRGDGTGERKEWERIYDYDVYNDLGNPDSGENHARPVL 227

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKN 143
           GGS  YPYPRRGRTGRKP  +  N
Sbjct: 228 GGSETYPYPRRGRTGRKPTRKDPN 251

[Close]
BLAST of Sed0002358 vs. ExPASy Swiss-Prot
Match: P09186 (Seed linoleate 9S-lipoxygenase-3 OS=Glycine max OX=3847 GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPIL 125
           Q YLP++TP  L KYRE+EL  LRGDGTG+R + ER+YDYDVYNDLG       + RP+L
Sbjct: 165 QTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERVYDYDVYNDLGDPDKGENHARPVL 224

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKN 143
           GG++ +PYPRRGRTGRKP  +  N
Sbjct: 225 GGNDTFPYPRRGRTGRKPTRKDPN 248

[Close]
BLAST of Sed0002358 vs. ExPASy Swiss-Prot
Match: P38416 (Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum OX=4081 GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.2e-23
Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPIL 125
           QAYLP++TP+ L KYRE+EL  LRGDGTGK  + +R+YDY  YNDLG       Y RPIL
Sbjct: 160 QAYLPSETPQPLRKYRENELVALRGDGTGKLEEWDRVYDYACYNDLGEPDKGEEYARPIL 219

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKN 143
           GGS+EYPYPRRGRTGR+P     N
Sbjct: 220 GGSSEYPYPRRGRTGREPTKADPN 243

[Close]
BLAST of Sed0002358 vs. ExPASy Swiss-Prot
Match: P14856 (Seed linoleate 9S-lipoxygenase-2 OS=Pisum sativum OX=3888 GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPIL 125
           ++YLP++TP  L KYRE+EL+ LRGDGTG+R   ERIYDYDVYNDLG         RPIL
Sbjct: 173 KSYLPSETPSPLVKYREEELQTLRGDGTGERKLHERIYDYDVYNDLGNPDHGEHLARPIL 232

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKN 143
           GGS+ +PYPRRGRTGR P  +  N
Sbjct: 233 GGSSTHPYPRRGRTGRYPTRKDPN 256

[Close]
BLAST of Sed0002358 vs. ExPASy Swiss-Prot
Match: P37831 (Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum OX=4113 GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-22
Identity = 53/78 (67.95%), Postives = 58/78 (74.36%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYD-------RPIL 125
           Q YLP++TPELL KYRE+EL  LRGDGTGKR   +RIYDYD+YNDLG         R  L
Sbjct: 162 QPYLPSETPELLRKYRENELLTLRGDGTGKREAWDRIYDYDIYNDLGNPDQGKENVRTTL 221

Query: 126 GGSNEYPYPRRGRTGRKP 137
           GGS EYPYPRRGRTGR P
Sbjct: 222 GGSAEYPYPRRGRTGRPP 239

[Close]
BLAST of Sed0002358 vs. ExPASy TrEMBL
Match: A0A5A7TWV9 (Putative linoleate 9S-lipoxygenase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00560 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.8e-23
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+L
Sbjct: 77  KAYIPNETPEPLRKYREDELKNLRGDGTGERQEWDRIYDYDVYNDLEDPSSDSTYVRPVL 136

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGS +YPYPRRGRTGR P  + KNY
Sbjct: 137 GGSTQYPYPRRGRTGRSPSKKDKNY 161

[Close]
BLAST of Sed0002358 vs. ExPASy TrEMBL
Match: A0A1S3BYA5 (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103494895 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.8e-23
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+L
Sbjct: 160 KAYIPNETPEPLRKYREDELKNLRGDGTGERQEWDRIYDYDVYNDLEDPSSDSTYVRPVL 219

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGS +YPYPRRGRTGR P  + KNY
Sbjct: 220 GGSTQYPYPRRGRTGRSPSKKDKNY 244

[Close]
BLAST of Sed0002358 vs. ExPASy TrEMBL
Match: A0A6J1DAF3 (Lipoxygenase OS=Momordica charantia OX=3673 GN=LOC111018866 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.5e-22
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPIL 125
           +AYLPN+TPE L KYRE+EL+ LRGD TG+R + +RIYDYDVYNDL        Y RPIL
Sbjct: 161 KAYLPNETPEPLRKYREEELKNLRGDETGERQEWDRIYDYDVYNDLEDPDSDSTYIRPIL 220

Query: 126 GGSNEYPYPRRGRTGRKPLSQGKNY 144
           GGSN+YPYPRRGRTGR P  + K Y
Sbjct: 221 GGSNQYPYPRRGRTGRAPSKKDKKY 245

[Close]
BLAST of Sed0002358 vs. ExPASy TrEMBL
Match: A0A4Y7IIK5 (Lipoxygenase OS=Papaver somniferum OX=3469 GN=C5167_040493 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.1e-22
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYP 125
           Q+YL + TPE L KYREDEL+ LRGDGTG+    +R+YDY VYND+G +RP+LGGS E+P
Sbjct: 160 QSYLTSNTPEPLRKYREDELKNLRGDGTGELQTWDRVYDYAVYNDVGLNRPVLGGSKEFP 219

Query: 126 YPRRGRTGRKPLSQGKNY------FNCYIIC 151
           YPRRGRTGRKP ++   Y      FN  I C
Sbjct: 220 YPRRGRTGRKPSNKDSKYETRLCPFNINIYC 250

[Close]
BLAST of Sed0002358 vs. ExPASy TrEMBL
Match: A0A4Y7KP50 (Lipoxygenase OS=Papaver somniferum OX=3469 GN=C5167_050618 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYP 125
           Q+YL + TPE L KYREDEL+ILRGDG G+    +R+YDY +YNDLG DRPILG S E P
Sbjct: 210 QSYLTSNTPEALLKYREDELKILRGDGAGELQSWDRVYDYALYNDLGTDRPILGNSTELP 269

Query: 126 YPRRGRTGRKPLSQGKNY 144
           YPRRGRTGRKP  +  NY
Sbjct: 270 YPRRGRTGRKPDKKDPNY 287

[Close]
BLAST of Sed0002358 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 )

HSP 1 Score: 98.2 bits (243), Expect = 6.0e-21
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 0 

Query: 36  GKGKTRWIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGK 95
           G G+  +I +    P       R  FS   + YLP++TP  L KYRE+EL  LRG G G+
Sbjct: 135 GHGRVHYICNSWIYPAKHYTTDRVFFS--NKTYLPHETPATLLKYREEELVSLRGTGEGE 194

Query: 96  RSKKERIYDYDVYNDLGY----DRPILGGSNEYPYPRRGRTGRKPLSQ 140
             + +R+YDY  YNDLG      RP+LGG+ EYPYPRRGRTGRKP  +
Sbjct: 195 LKEWDRVYDYAYYNDLGVPPKNPRPVLGGTQEYPYPRRGRTGRKPTKE 240

[Close]
BLAST of Sed0002358 vs. TAIR 10
Match: AT3G22400.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 0 

Query: 66  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKK-ERIYDYDVYNDLGYD-------RPI 125
           +AYLP++TPEL+ + RE+EL+ LRG+  G   K+ +R+YDY  YNDLG         RP+
Sbjct: 182 KAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRPV 241

Query: 126 LGGSNEYPYPRRGRTGRK 136
           LGGS E PYPRRG+TGRK
Sbjct: 242 LGGSPELPYPRRGKTGRK 259

[Close]
BLAST of Sed0002358 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 42  WIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKER 101
           W++S    P    L          Q YLP++TP  L   RE ELE LRG+G G+R   +R
Sbjct: 213 WVQSQKDHPSKRIL-------FTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDR 272

Query: 102 IYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGR 135
           IYDYDVYND+G         RP LGG  E+PYPRR RTGR
Sbjct: 273 IYDYDVYNDIGNPDISRELARPTLGG-REFPYPRRCRTGR 304

[Close]
BLAST of Sed0002358 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 51/108 (47.22%), Postives = 61/108 (56.48%), Query Frame = 0 

Query: 42  WIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKER 101
           W++S    P       +  F  N Q YLPN+TP  L   RE EL+ LRGDG+G R   +R
Sbjct: 207 WVQSQKDHP------DKRIFFTN-QPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDR 266

Query: 102 IYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN 143
           IYD+DVYNDLG         RP LGG  E PYPRR RTGR+     K+
Sbjct: 267 IYDFDVYNDLGNPDKSSELSRPKLGG-KEVPYPRRCRTGRQSTVSDKD 306

[Close]
BLAST of Sed0002358 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 0 

Query: 49  SPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRG---DGTGKRSKKERIYDY 108
           +PK+     R  FS   ++YLP+QTPE L KYR++ELE L+G   +  G+ +K ERIYDY
Sbjct: 186 APKSVDPTKRIFFS--DKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDY 245

Query: 109 DVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKP 137
           DVYND+G         RP++GG   +PYPRR +TGRKP
Sbjct: 246 DVYNDVGDPDNDPELARPVIGGLT-HPYPRRCKTGRKP 280

The following BLAST results are available for this feature:
BLAST of Sed0002358 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047992.17.8e-2365.88putative linoleate 9S-lipoxygenase 5 [Cucumis melo var. makuwa][more]
XP_008454500.17.8e-2365.88PREDICTED: probable linoleate 9S-lipoxygenase 5 [Cucumis melo][more]
KAE8652023.18.6e-2263.53hypothetical protein Csa_023391 [Cucumis sativus][more]
XP_004139356.18.6e-2263.53probable linoleate 9S-lipoxygenase 5 [Cucumis sativus] >KAE8651605.1 hypothetica... [more]
XP_022150808.11.1e-2165.88probable linoleate 9S-lipoxygenase 5 [Momordica charantia][more]
BLAST of Sed0002358 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P099183.6e-2363.10Seed linoleate 9S-lipoxygenase-3 OS=Pisum sativum OX=3888 GN=LOX1.3 PE=2 SV=1[more]
P091864.8e-2360.71Seed linoleate 9S-lipoxygenase-3 OS=Glycine max OX=3847 GN=LOX1.3 PE=1 SV=1[more]
P384166.2e-2363.10Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum OX=4081 GN=LOX1.2 PE=2 SV=1[more]
P148561.8e-2261.90Seed linoleate 9S-lipoxygenase-2 OS=Pisum sativum OX=3888 GN=LOX1.2 PE=2 SV=1[more]
P378313.1e-2267.95Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum OX=4113 GN=LOX1.1 PE=2 SV=1[more]
BLAST of Sed0002358 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TWV93.8e-2365.88Putative linoleate 9S-lipoxygenase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3BYA53.8e-2365.88Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103494895 PE=3 SV=1[more]
A0A6J1DAF35.5e-2265.88Lipoxygenase OS=Momordica charantia OX=3673 GN=LOC111018866 PE=3 SV=1[more]
A0A4Y7IIK57.1e-2259.34Lipoxygenase OS=Papaver somniferum OX=3469 GN=C5167_040493 PE=3 SV=1[more]
A0A4Y7KP501.2e-2166.67Lipoxygenase OS=Papaver somniferum OX=3469 GN=C5167_050618 PE=3 SV=1[more]
BLAST of Sed0002358 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55020.16.0e-2148.15lipoxygenase 1 [more]
AT3G22400.11.2e-1655.13PLAT/LH2 domain-containing lipoxygenase family protein [more]
AT1G72520.12.0e-1648.00PLAT/LH2 domain-containing lipoxygenase family protein [more]
AT1G17420.13.4e-1647.22lipoxygenase 3 [more]
AT3G45140.13.4e-1650.00lipoxygenase 2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001246Lipoxygenase, plantPRINTSPR00468PLTLPOXGNASEcoord: 99..115
score: 66.21
coord: 60..81
score: 42.17
coord: 125..144
score: 55.43
NoneNo IPR availableGENE3D4.10.375.10coord: 69..149
e-value: 2.0E-29
score: 103.9
NoneNo IPR availablePANTHERPTHR11771:SF115SEED LINOLEATE 9S-LIPOXYGENASEcoord: 64..143
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 77..140
e-value: 3.2E-23
score: 82.1
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 67..151
score: 28.963717
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 64..143
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILY48484Lipoxigenasecoord: 69..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002358.1Sed0002358.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046394 carboxylic acid biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0016491 oxidoreductase activity