Sed0002306 (gene) Chayote v1

Overview


Name	Sed0002306
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SKP1-like protein 21
Location	LG05: 3331397 .. 3335092 (-)
RNA-Seq Expression	Sed0002306
Synteny	Sed0002306

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAAAGTTCTATGGCGGTAGTCAAACCTGAGGTACACTGTTTCATTTCATTGATTTATGCTAGGTCCAAGAATCCATCTTTGTTAAGAACAAGGCACAAAGATTCTAAGCAGATTTTTTTCATCTCACAAACTTTTTTGGGATCATGTGTATGACACATTAATGCATTTAGAGCTCCTTGAAAATCTCCTTATGGGTTTTGAAGATCAGTGCACAGTAGGTGATAGTTTATGCAAAAATCCCACTTATTATAAGTTGCTGCATCAGGCACTTCATTATCTGTTGCTTAGTTTTTCTTGTGGAATGTGGTTTTGCTCCAGATGAAGTCTTACATTTGGCTTCAAACTTCCGATGGCTCAATACAACAAGTTGAAGAAGAGGTTGCTATGTTTTGCCCTATGATTTGTCGAGAAATACTCCAAACGGGAATGGGATCCTCCAAAAATTATGCAATATCTCTTCCACAGCGAGTGAATCCTGCTATATTAGGTTTAATTCTTGACTATTGCAGGTTCCATCAAGTACCGGGTCGCTCCAATAAGGTCGGTATATTTCTGAATCTGTTCCGACCTCTAACCAGTAACCACTATCAGTTATGGGGGATGCTGTTACTTATGGACAATTGAGTAGTCATTTTATTAATGAACATGAGTTATTCTTTTCCACAGGAGCGTAAAACATTTGATGAGAAATTTATTCGCATGGACACAAAAAAGCTATGTGAGTTGACGTCTGCTGCTGATAGCCTCCAATTGAAACCCTTGGTTGATCTAACTAGCCGAGCACTTGCTCGAATAATTGAAGGAAAGACTCCAGAGGAGATAAGGGAGACATTTCACCTACCCGATGATCTCACAGAGGTGTGCTCTATATTATACACATGCCCACGCCCCAACACACACTCACATGTTCCAATTTAAGTGTCTCACTCAGATTCCATTATACAGGAGGAGAAGTTGGAGCCCTTGCGAAACATAACAGATGATCCACGCATTCGGCTCTTGAATCGATTATATGCCCGAAAAAGGAAAGAATTAAGAGAGAGAGAGAAATTGAAGGTGCACTACCTTTTTTCATAATGGAAAACATTATTTATATCAATAAAAGTTATATTATCGGAAAAAGAGGATGAGGTATTTTCTAATAAAGAAAATAAAAATCACAAAATCAAAAAATTCTTTTCCAAGGCTCTGAGTAGCATACTTAATCTGACTTTGAGTTATGTCATACAATTTTAATCCCACATTTGCAATTTAGCTTGTTCTTTTTACAACTTTCAGAATGTTGAGATTGAGGAGCGCGTGGATGATAGATCAGTCGATGACCTTTTGTCATTTATAAATGGAGGAGACAGAGGTACTTGAGAATTGTTCACTCGTTCTTTCGCACTCTTTCTCATTTCATGGTCTAAACTTTGAACTTTGCTGTCCTTTTCTATTCATGTTCTAGACTTCGTACTGCACCTTGAATTTTACTGTCCTTGTCAAGTGGTTTTGCAATGTATAAGGATTTGCAACAATTTTCCTGTTAACATGGGGAGAGAAGTTGCAACTTATCCATACTCTTTCAGTCTTTTGAGATTCTCAGTGCTAAATCGCTCTTATTTATTATTTTTAATTCATCCACTACTGTTCCACATGCAGATTCAAAGGCAGTTAAAACGAACAAAAACAAAAAGAAAAATCGGAGGAGAAAAGATCAGCAGAAGGATTCTTCTTCAACCAATGAAAATGGGAACCATGATAAATTAGGGGTTTGCATCTGTGCATGAGTTTTTTTGTATTTGTCTTGTCTAATCATGTGTCCTTTGCTCTAAAAAGTTACTTTCTTTTCCATCAGAAGTAGCTGTGATTATTGAATAAGCTCTCTTACATTGTTCAGGAGTTGGATGCTTTTCCTTCTTGTTGCCAAAATAATGAGTTCAACAAGATTTTGCGGTCATCTCCGAGTAGAACCGTGAAATCACAGGATTCAGCAGCTGCCACATATTCACCTAAGATCGAGTACGATGATGCTGATATTTATGATGATCTAGATCCTGCAATGAAGGAGCAACTTGACAGGTTAAATATGTCAAGCAAATGTTGTATTATATTGTACTCTTTTTCCAGAATATTTCATTCAACTGTCAACTGTTCAATTTGCTTCTTATGCATGCTATTATGCTATAAGGTCATAGATATTTGATTTTAATTTCTGATTTGTGAAATTATGGTTTTCCTATCTATACTGTTGATTAATGAGTGAAATGTTCTAATCTGGCACCGTGGGATACACGTAAAATGGTACTTAGATAGATTAAGGTCTTGAAGATTAATATTGGCTCAATTTTAGTTCTTTTCATGTCCGTGAGGCATGAACCATCATGCTAGTAGGATGAGTCATCACCAAAAGGTTATGAGTTCAAATCTTTAACTGCCAAATGTTGTTGAATTAAAAGAAAATATTGAACAATCATGGGTTGGTCTAATGGTCAAGAGGGCTTTTGGGAATACAAAAACTATGAGTTCAATCCATAGTAGTTACCTACCTAGAAACTAATTTCCTACAAATTTCTTTGGCATCAAAATGTTGTAGGGTCTTACAGTTTGTCCCGTGACTTTGTGAGAATGTTGAGATGCGCGTAAGTGAGTCTGCACACTCACACACACACATATAAAGACTGTTTACGTGTTTAACAGTTGTATTAACCATATTGTCTAAAATAAATGATTTTGCGCCAACAAGAGCAGTTGCTCAACGGTATTAGTGTATACTCAATAACCAAGAGGTCTTGGGGTTTGAATCCACCCACCCCCAATCGTTGTAATCTAAAAAAAAAGATGTTTTTGCTTTTATGAAGAAACTATGTTGTGTACTAGTCTTCTGCCATATTGAAACCCGAATCACACTTTCATGAGTGTGTACTGCTGATAGCCTTTTTGTTCGAAACGCACTTCTTTTTGTCACCATATAAGTTAGTTAATCTCTTGAATGCAGGGAAGTAGAAGACTTTGCAAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTTTATCGCTAGGCCAAGAAAGAAAACTGGTGACAGTATTAAATGGCAATGGTTCATCACAAAGACTCACAAGTTAGTTTTGTGTTAATTATTTCATATCCTTTGAAGAGATTGTCTTGAGCTGTGGTATTATCATATTTTTAAGTACAAAGGCTGGATGCTGATTACTAGTTGAGAATCAAATACTCCACGTTTCTCGATTACCGAGTATTGTATTACCGGGCAGTAGTTTCGAAATGAACCGTCTCAAAAATCTCGGGGTGGAGGCGTGGAGCATTTTGGTTTTAGAAAACTGATAAACTGAGCCACACAATTGAGAATTAGACAAACGTGAAGTTCAAGTTTTTGGGGTAGAGCTACGACTGGTGCATTTATTTGATATGTCTAGAGCAGGTGCTGATAGGAGGTTGTAGGCTTCCTATCAGAGTTCAGAGGTAGTGCCTGTGAGAGACGAATTGCTTTCCGGTACACAAACACAGTAACTCGCAAGAGCCCGATGCTACTGTTGGAAACTTGGAAGGAAGCAAGCAAGAGTTTGCAAGATTTCAGTGTAAATGGTGGATGTGAAGATTTATAGGCAATTATATTACATGAGGAAGATGCAAATTTTTGTTTTGTGGACATTTGTATTGCAGAGAAGTAAAAGAATCATAA

mRNA sequence

ATGACTGAAAGTTCTATGGCGGTAGTCAAACCTGAGATGAAGTCTTACATTTGGCTTCAAACTTCCGATGGCTCAATACAACAAGTTGAAGAAGAGGTTGCTATGTTTTGCCCTATGATTTGTCGAGAAATACTCCAAACGGGAATGGGATCCTCCAAAAATTATGCAATATCTCTTCCACAGCGAGTGAATCCTGCTATATTAGGTTTAATTCTTGACTATTGCAGGTTCCATCAAGTACCGGGTCGCTCCAATAAGGAGCGTAAAACATTTGATGAGAAATTTATTCGCATGGACACAAAAAAGCTATGTGAGTTGACGTCTGCTGCTGATAGCCTCCAATTGAAACCCTTGGTTGATCTAACTAGCCGAGCACTTGCTCGAATAATTGAAGGAAAGACTCCAGAGGAGATAAGGGAGACATTTCACCTACCCGATGATCTCACAGAGGAGGAGAAGTTGGAGCCCTTGCGAAACATAACAGATGATCCACGCATTCGGCTCTTGAATCGATTATATGCCCGAAAAAGGAAAGAATTAAGAGAGAGAGAGAAATTGAAGAATGTTGAGATTGAGGAGCGCGTGGATGATAGATCAGTCGATGACCTTTTGTCATTTATAAATGGAGGAGACAGAGATTCAAAGGCAGTTAAAACGAACAAAAACAAAAAGAAAAATCGGAGGAGAAAAGATCAGCAGAAGGATTCTTCTTCAACCAATGAAAATGGGAACCATGATAAATTAGGGGAGTTGGATGCTTTTCCTTCTTGTTGCCAAAATAATGAGTTCAACAAGATTTTGCGGTCATCTCCGAGTAGAACCGTGAAATCACAGGATTCAGCAGCTGCCACATATTCACCTAAGATCGAGTACGATGATGCTGATATTTATGATGATCTAGATCCTGCAATGAAGGAGCAACTTGACAGGGAAGTAGAAGACTTTGCAAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTTTATCGCTAGGCCAAGAAAGAAAACTGGTGACAGTATTAAATGGCAATGGTTCATCACAAAGACTCACAAGAAGATGCAAATTTTTGTTTTGTGGACATTTGTATTGCAGAGAAGTAAAAGAATCATAA

Coding sequence (CDS)

ATGACTGAAAGTTCTATGGCGGTAGTCAAACCTGAGATGAAGTCTTACATTTGGCTTCAAACTTCCGATGGCTCAATACAACAAGTTGAAGAAGAGGTTGCTATGTTTTGCCCTATGATTTGTCGAGAAATACTCCAAACGGGAATGGGATCCTCCAAAAATTATGCAATATCTCTTCCACAGCGAGTGAATCCTGCTATATTAGGTTTAATTCTTGACTATTGCAGGTTCCATCAAGTACCGGGTCGCTCCAATAAGGAGCGTAAAACATTTGATGAGAAATTTATTCGCATGGACACAAAAAAGCTATGTGAGTTGACGTCTGCTGCTGATAGCCTCCAATTGAAACCCTTGGTTGATCTAACTAGCCGAGCACTTGCTCGAATAATTGAAGGAAAGACTCCAGAGGAGATAAGGGAGACATTTCACCTACCCGATGATCTCACAGAGGAGGAGAAGTTGGAGCCCTTGCGAAACATAACAGATGATCCACGCATTCGGCTCTTGAATCGATTATATGCCCGAAAAAGGAAAGAATTAAGAGAGAGAGAGAAATTGAAGAATGTTGAGATTGAGGAGCGCGTGGATGATAGATCAGTCGATGACCTTTTGTCATTTATAAATGGAGGAGACAGAGATTCAAAGGCAGTTAAAACGAACAAAAACAAAAAGAAAAATCGGAGGAGAAAAGATCAGCAGAAGGATTCTTCTTCAACCAATGAAAATGGGAACCATGATAAATTAGGGGAGTTGGATGCTTTTCCTTCTTGTTGCCAAAATAATGAGTTCAACAAGATTTTGCGGTCATCTCCGAGTAGAACCGTGAAATCACAGGATTCAGCAGCTGCCACATATTCACCTAAGATCGAGTACGATGATGCTGATATTTATGATGATCTAGATCCTGCAATGAAGGAGCAACTTGACAGGGAAGTAGAAGACTTTGCAAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTTTATCGCTAGGCCAAGAAAGAAAACTGGTGACAGTATTAAATGGCAATGGTTCATCACAAAGACTCACAAGAAGATGCAAATTTTTGTTTTGTGGACATTTGTATTGCAGAGAAGTAAAAGAATCATAA

Protein sequence

MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDLDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRRCKFLFCGHLYCREVKES

Homology

[Close]

BLAST of Sed0002306 vs. NCBI nr
Match: XP_038874848.1 (SKP1-like protein 21 isoform X2 [Benincasa hispida])

HSP 1 Score: 644.8 bits (1662), Expect = 4.5e-181
Identity = 334/355 (94.08%), Postives = 345/355 (97.18%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           M+ES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVA FCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVATFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSS+N
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSSN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+GELDA PSCCQNNEFNKIL +SPSRTVKSQDSAAA Y+ KIE+DDADIYDDL
Sbjct: 241 ENGNHDKIGELDALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYASKIEFDDADIYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRR 356
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQER LVTVL GNGSS R T++
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQ 355

[Close]

BLAST of Sed0002306 vs. NCBI nr
Match: XP_038874849.1 (SKP1-like protein 21 isoform X3 [Benincasa hispida])

HSP 1 Score: 644.0 bits (1660), Expect = 7.7e-181
Identity = 334/353 (94.62%), Postives = 343/353 (97.17%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           M+ES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVA FCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVATFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSS+N
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSSN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+GELDA PSCCQNNEFNKIL +SPSRTVKSQDSAAA Y+ KIE+DDADIYDDL
Sbjct: 241 ENGNHDKIGELDALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYASKIEFDDADIYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLT 354
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQER LVTVL GNGSS R T
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFT 353

[Close]

BLAST of Sed0002306 vs. NCBI nr
Match: XP_038874845.1 (SKP1-like protein 21 isoform X1 [Benincasa hispida] >XP_038874846.1 SKP1-like protein 21 isoform X1 [Benincasa hispida] >XP_038874847.1 SKP1-like protein 21 isoform X1 [Benincasa hispida])

HSP 1 Score: 644.0 bits (1660), Expect = 7.7e-181
Identity = 334/353 (94.62%), Postives = 343/353 (97.17%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           M+ES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVA FCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVATFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSS+N
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSSN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+GELDA PSCCQNNEFNKIL +SPSRTVKSQDSAAA Y+ KIE+DDADIYDDL
Sbjct: 241 ENGNHDKIGELDALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYASKIEFDDADIYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLT 354
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQER LVTVL GNGSS R T
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFT 353

[Close]

BLAST of Sed0002306 vs. NCBI nr
Match: XP_022158934.1 (SKP1-like protein 21 isoform X1 [Momordica charantia])

HSP 1 Score: 642.9 bits (1657), Expect = 1.7e-180
Identity = 337/355 (94.93%), Postives = 345/355 (97.18%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           MTES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MTESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSSTN
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+GELDA PSC Q NE NKIL +SPSRTVKSQDSAAA YSPKIE+DD DIYDDL
Sbjct: 241 ENGNHDKIGELDALPSCRQ-NECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRR 356
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSS R T++
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFTKQ 354

[Close]

BLAST of Sed0002306 vs. NCBI nr
Match: XP_022922231.1 (SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_022922232.1 SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_022922233.1 SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_023549784.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549785.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549786.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549788.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.5 bits (1656), Expect = 2.2e-180
Identity = 333/355 (93.80%), Postives = 344/355 (96.90%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           MTES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MTESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVK NKNKKKNRRRKDQQKDSSSTN
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKANKNKKKNRRRKDQQKDSSSTN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+ ELDA PSCCQNNEF+KI  +SPSRTVKSQDSA + YS KIE+DDAD+YDDL
Sbjct: 241 ENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKSQDSAVSIYSSKIEFDDADMYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRR 356
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSS R T++
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSTRFTKQ 355

[Close]

BLAST of Sed0002306 vs. ExPASy Swiss-Prot
Match: Q8LF97 (SKP1-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=ASK21 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 4.5e-123
Identity = 242/355 (68.17%), Postives = 285/355 (80.28%), Query Frame = 0


Query: 1   MTESSMAVVKPE-MKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISL 60
           M+E  MA++KPE MKSYIWL+T+DGSIQQVE+EVAMFCPMIC+E++Q G+GSSKNYAISL
Sbjct: 1   MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 61  PQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120
           PQRVNPA+L LI DYCRFHQVPGRSNKERK +DEKFIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61  PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKE 180
           DLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKE
Sbjct: 121 DLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKE 180

Query: 181 LREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSST 240
           L+EREKLK+VE+EE VD+RSVDDLLSFING  RD K VKT+K+KKKN++RK+Q+  SS+ 
Sbjct: 181 LKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNG 240

Query: 241 NENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDD 300
                   L  LD+     +  +         S     +D     ++PK E++D  I D+
Sbjct: 241 TCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSNLPSMEDD---IFTPKTEFEDGYIDDE 300

Query: 301 LDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTV-LNGNGSSQRLT 354
           +DPA+KE LDREVEDFARRLNS W      +LS+GQER+ V   +NGNG+S+RLT
Sbjct: 301 IDPALKELLDREVEDFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344

[Close]

BLAST of Sed0002306 vs. ExPASy Swiss-Prot
Match: A8MQG7 (SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.3e-118
Identity = 239/356 (67.13%), Postives = 285/356 (80.06%), Query Frame = 0


Query: 1   MTESSMAVVKPE-MKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISL 60
           M+E  +AV+KPE MKSYIWLQT+DGSIQQVE+EVAMFCPMIC+E++Q G+GSSKN+AISL
Sbjct: 1   MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60

Query: 61  PQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120
           PQRVNPA+  LILDYCRFHQ+PGRSNKERKT+DE+FIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61  PQRVNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKE 180
           DLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKE
Sbjct: 121 DLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKE 180

Query: 181 LREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSST 240
           L+ERE+LKNVE+EE VD+RSVDDLLSFING  RD KAVK +K KKK +++KDQ+  SS  
Sbjct: 181 LKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQKIVSS-- 240

Query: 241 NENGNHDKLG-ELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYD 300
             N  HDK   +L +   C +  E    +R  P+      D +    +P    +D DI D
Sbjct: 241 --NNIHDKESHDLRSKQQCVE--EIGSSMREVPNLLSAEDDIS----TPNAGSEDEDIDD 300

Query: 301 DLDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTV-LNGNGSSQRLT 354
           ++DPAM+E LDREVEDFA+RLNS+W      + SLG+ER+ V   +NGNG+++R T
Sbjct: 301 EIDPAMRELLDREVEDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHT 338

[Close]

BLAST of Sed0002306 vs. ExPASy Swiss-Prot
Match: Q3ZCF3 (S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 17  IWLQTSDGSIQQVEEEVAMFCPMICREILQTGM-GSSKNYAISLPQRVNPAILGLILDYC 76
           I LQ+SDG I +V+ E+A     I   +   GM     +  + LP  VN AIL  ++ +C
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWC 63

Query: 77  RFHQ-----VPGRSNKERKT-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 136
             H+          NKE++T     +D++F+++D   L EL  AA+ L +K L+D+T + 
Sbjct: 64  THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 123

Query: 137 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 156
           +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 124 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of Sed0002306 vs. ExPASy Swiss-Prot
Match: P63209 (S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 17  IWLQTSDGSIQQVEEEVAMFCPMICREILQTGM-GSSKNYAISLPQRVNPAILGLILDYC 76
           I LQ+SDG I +V+ E+A     I   +   GM     +  + LP  VN AIL  ++ +C
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWC 63

Query: 77  RFHQ-----VPGRSNKERKT-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 136
             H+          NKE++T     +D++F+++D   L EL  AA+ L +K L+D+T + 
Sbjct: 64  THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 123

Query: 137 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 156
           +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 124 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of Sed0002306 vs. ExPASy Swiss-Prot
Match: Q5ZKF5 (S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 17  IWLQTSDGSIQQVEEEVAMFCPMICREILQTGM-GSSKNYAISLPQRVNPAILGLILDYC 76
           I LQ+SDG I +V+ E+A     I   +   GM     +  + LP  VN AIL  ++ +C
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWC 63

Query: 77  RFHQ-----VPGRSNKERKT-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 136
             H+          NKE++T     +D++F+++D   L EL  AA+ L +K L+D+T + 
Sbjct: 64  THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 123

Query: 137 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 156
           +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 124 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of Sed0002306 vs. ExPASy TrEMBL
Match: A0A6J1E0W6 (SKP1-like protein 21 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025387 PE=3 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 8.3e-181
Identity = 337/355 (94.93%), Postives = 345/355 (97.18%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           MTES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MTESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSSTN
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+GELDA PSC Q NE NKIL +SPSRTVKSQDSAAA YSPKIE+DD DIYDDL
Sbjct: 241 ENGNHDKIGELDALPSCRQ-NECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRR 356
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSS R T++
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFTKQ 354

[Close]

BLAST of Sed0002306 vs. ExPASy TrEMBL
Match: A0A6J1E2N5 (SKP1-like protein 21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE=3 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 1.1e-180
Identity = 333/355 (93.80%), Postives = 344/355 (96.90%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           MTES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MTESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVK NKNKKKNRRRKDQQKDSSSTN
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKANKNKKKNRRRKDQQKDSSSTN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+ ELDA PSCCQNNEF+KI  +SPSRTVKSQDSA + YS KIE+DDAD+YDDL
Sbjct: 241 ENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKSQDSAVSIYSSKIEFDDADMYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRR 356
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSS R T++
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSTRFTKQ 355

[Close]

BLAST of Sed0002306 vs. ExPASy TrEMBL
Match: A0A1S3AU79 (SKP1-like protein 21 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482906 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 336/356 (94.38%), Postives = 345/356 (96.91%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           M+ES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSS-T 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSS T
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTT 240

Query: 241 NENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDD 300
           NENGNHDK+ ELDA PSCCQNNEFNKIL +SPSRTVKSQDSAAA YS KIE+DDADIYDD
Sbjct: 241 NENGNHDKIEELDALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDD 300

Query: 301 LDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTRR 356
           LDPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQER LVTVL GNGSS R T++
Sbjct: 301 LDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQ 356

[Close]

BLAST of Sed0002306 vs. ExPASy TrEMBL
Match: A0A6J1E2F2 (SKP1-like protein 21 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025387 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 337/353 (95.47%), Postives = 343/353 (97.17%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           MTES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MTESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSSTN
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTN 240

Query: 241 ENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDDL 300
           ENGNHDK+GELDA PSC Q NE NKIL +SPSRTVKSQDSAAA YSPKIE+DD DIYDDL
Sbjct: 241 ENGNHDKIGELDALPSCRQ-NECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDL 300

Query: 301 DPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLT 354
           DPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSS R T
Sbjct: 301 DPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFT 352

[Close]

BLAST of Sed0002306 vs. ExPASy TrEMBL
Match: A0A5A7TKX5 (SKP1-like protein 21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G001020 PE=3 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.9e-180
Identity = 336/355 (94.65%), Postives = 344/355 (96.90%), Query Frame = 0


Query: 1   MTESSMAVVKPEMKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60
           M+ES+MAVVKPEMKSYIWLQT+DGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120
           QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180
           LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL 180

Query: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSS-T 240
           REREKLKNVEIEERVDDRSVDDLLSFINGGD DSKAVKTNKNKKKNRRRKDQQKDSSS T
Sbjct: 181 REREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTT 240

Query: 241 NENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDD 300
           NENGNHDK+ ELDA PSCCQNNEFNKIL +SPSRTVKSQDSAAA YS KIE+DDADIYDD
Sbjct: 241 NENGNHDKIEELDALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDD 300

Query: 301 LDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSQRLTR 355
           LDPAMKE+LDREVEDFARRLNSDWPERVQEILSLGQER LVTVL GNGSS R T+
Sbjct: 301 LDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTK 355

[Close]

BLAST of Sed0002306 vs. TAIR 10
Match: AT3G61415.1 (SKP1-like 21 )

HSP 1 Score: 442.6 bits (1137), Expect = 3.2e-124
Identity = 242/355 (68.17%), Postives = 285/355 (80.28%), Query Frame = 0


Query: 1   MTESSMAVVKPE-MKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISL 60
           M+E  MA++KPE MKSYIWL+T+DGSIQQVE+EVAMFCPMIC+E++Q G+GSSKNYAISL
Sbjct: 1   MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 61  PQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120
           PQRVNPA+L LI DYCRFHQVPGRSNKERK +DEKFIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61  PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKE 180
           DLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKE
Sbjct: 121 DLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKE 180

Query: 181 LREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSST 240
           L+EREKLK+VE+EE VD+RSVDDLLSFING  RD K VKT+K+KKKN++RK+Q+  SS+ 
Sbjct: 181 LKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNG 240

Query: 241 NENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDD 300
                   L  LD+     +  +         S     +D     ++PK E++D  I D+
Sbjct: 241 TCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSNLPSMEDD---IFTPKTEFEDGYIDDE 300

Query: 301 LDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTV-LNGNGSSQRLT 354
           +DPA+KE LDREVEDFARRLNS W      +LS+GQER+ V   +NGNG+S+RLT
Sbjct: 301 IDPALKELLDREVEDFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344

[Close]

BLAST of Sed0002306 vs. TAIR 10
Match: AT3G61415.2 (SKP1-like 21 )

HSP 1 Score: 442.6 bits (1137), Expect = 3.2e-124
Identity = 242/355 (68.17%), Postives = 285/355 (80.28%), Query Frame = 0


Query: 1   MTESSMAVVKPE-MKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISL 60
           M+E  MA++KPE MKSYIWL+T+DGSIQQVE+EVAMFCPMIC+E++Q G+GSSKNYAISL
Sbjct: 1   MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60

Query: 61  PQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120
           PQRVNPA+L LI DYCRFHQVPGRSNKERK +DEKFIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61  PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKE 180
           DLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKE
Sbjct: 121 DLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKE 180

Query: 181 LREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSST 240
           L+EREKLK+VE+EE VD+RSVDDLLSFING  RD K VKT+K+KKKN++RK+Q+  SS+ 
Sbjct: 181 LKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNG 240

Query: 241 NENGNHDKLGELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYDD 300
                   L  LD+     +  +         S     +D     ++PK E++D  I D+
Sbjct: 241 TCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSNLPSMEDD---IFTPKTEFEDGYIDDE 300

Query: 301 LDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTV-LNGNGSSQRLT 354
           +DPA+KE LDREVEDFARRLNS W      +LS+GQER+ V   +NGNG+S+RLT
Sbjct: 301 IDPALKELLDREVEDFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344

[Close]

BLAST of Sed0002306 vs. TAIR 10
Match: AT2G45950.1 (SKP1-like 20 )

HSP 1 Score: 426.4 bits (1095), Expect = 2.4e-119
Identity = 239/356 (67.13%), Postives = 285/356 (80.06%), Query Frame = 0


Query: 1   MTESSMAVVKPE-MKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISL 60
           M+E  +AV+KPE MKSYIWLQT+DGSIQQVE+EVAMFCPMIC+E++Q G+GSSKN+AISL
Sbjct: 1   MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60

Query: 61  PQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120
           PQRVNPA+  LILDYCRFHQ+PGRSNKERKT+DE+FIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61  PQRVNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKE 180
           DLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKE
Sbjct: 121 DLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKE 180

Query: 181 LREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSST 240
           L+ERE+LKNVE+EE VD+RSVDDLLSFING  RD KAVK +K KKK +++KDQ+  SS  
Sbjct: 181 LKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQKIVSS-- 240

Query: 241 NENGNHDKLG-ELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYD 300
             N  HDK   +L +   C +  E    +R  P+      D +    +P    +D DI D
Sbjct: 241 --NNIHDKESHDLRSKQQCVE--EIGSSMREVPNLLSAEDDIS----TPNAGSEDEDIDD 300

Query: 301 DLDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTV-LNGNGSSQRLT 354
           ++DPAM+E LDREVEDFA+RLNS+W      + SLG+ER+ V   +NGNG+++R T
Sbjct: 301 EIDPAMRELLDREVEDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHT 338

[Close]

BLAST of Sed0002306 vs. TAIR 10
Match: AT2G45950.2 (SKP1-like 20 )

HSP 1 Score: 426.4 bits (1095), Expect = 2.4e-119
Identity = 239/356 (67.13%), Postives = 285/356 (80.06%), Query Frame = 0


Query: 1   MTESSMAVVKPE-MKSYIWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISL 60
           M+E  +AV+KPE MKSYIWLQT+DGSIQQVE+EVAMFCPMIC+E++Q G+GSSKN+AISL
Sbjct: 1   MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60

Query: 61  PQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120
           PQRVNPA+  LILDYCRFHQ+PGRSNKERKT+DE+FIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61  PQRVNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKE 180
           DLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKE
Sbjct: 121 DLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKE 180

Query: 181 LREREKLKNVEIEERVDDRSVDDLLSFINGGDRDSKAVKTNKNKKKNRRRKDQQKDSSST 240
           L+ERE+LKNVE+EE VD+RSVDDLLSFING  RD KAVK +K KKK +++KDQ+  SS  
Sbjct: 181 LKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQKIVSS-- 240

Query: 241 NENGNHDKLG-ELDAFPSCCQNNEFNKILRSSPSRTVKSQDSAAATYSPKIEYDDADIYD 300
             N  HDK   +L +   C +  E    +R  P+      D +    +P    +D DI D
Sbjct: 241 --NNIHDKESHDLRSKQQCVE--EIGSSMREVPNLLSAEDDIS----TPNAGSEDEDIDD 300

Query: 301 DLDPAMKEQLDREVEDFARRLNSDWPERVQEILSLGQERKLVTV-LNGNGSSQRLT 354
           ++DPAM+E LDREVEDFA+RLNS+W      + SLG+ER+ V   +NGNG+++R T
Sbjct: 301 EIDPAMRELLDREVEDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHT 338

[Close]

BLAST of Sed0002306 vs. TAIR 10
Match: AT3G21850.1 (SKP1-like 9 )

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-17
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 17  IWLQTSDGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLILDYCR 76
           I L++SDG   +VEEE A  C +I   I         +  I LP  V   IL ++++YC 
Sbjct: 6   IILKSSDGHSFEVEEEAARQCQII---IAHMSENDCTDNGIPLP-NVTGKILAMVIEYCN 65

Query: 77  FHQVPGR---SNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGK 136
            H V      S+ + K +D++F+  DT  + +L  AA+ L +K L DL  + +A II+G 
Sbjct: 66  KHHVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGN 125

Query: 137 TPEEIRETFHLPDDLTEEEK 154
           TPE+IRE F++ +DLT EE+
Sbjct: 126 TPEQIREFFNIENDLTPEEE 141

The following BLAST results are available for this feature:

BLAST of Sed0002306 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874848.1	4.5e-181	94.08	SKP1-like protein 21 isoform X2 [Benincasa hispida]	[more]
XP_038874849.1	7.7e-181	94.62	SKP1-like protein 21 isoform X3 [Benincasa hispida]	[more]
XP_038874845.1	7.7e-181	94.62	SKP1-like protein 21 isoform X1 [Benincasa hispida] >XP_038874846.1 SKP1-like pr...	[more]
XP_022158934.1	1.7e-180	94.93	SKP1-like protein 21 isoform X1 [Momordica charantia]	[more]
XP_022922231.1	2.2e-180	93.80	SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_022922232.1 SKP1-like p...	[more]

BLAST of Sed0002306 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF97	4.5e-123	68.17	SKP1-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=ASK21 PE=2 SV=1	[more]
A8MQG7	3.3e-118	67.13	SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1	[more]
Q3ZCF3	2.8e-16	37.33	S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=2 SV=1	[more]
P63209	2.8e-16	37.33	S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=...	[more]
Q5ZKF5	2.8e-16	37.33	S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1	[more]

BLAST of Sed0002306 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0W6	8.3e-181	94.93	SKP1-like protein 21 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025387 P...	[more]
A0A6J1E2N5	1.1e-180	93.80	SKP1-like protein 21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE...	[more]
A0A1S3AU79	1.4e-180	94.38	SKP1-like protein 21 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482906 PE=3 SV=...	[more]
A0A6J1E2F2	1.4e-180	95.47	SKP1-like protein 21 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025387 P...	[more]
A0A5A7TKX5	1.9e-180	94.65	SKP1-like protein 21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Sed0002306 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61415.1	3.2e-124	68.17	SKP1-like 21	[more]
AT3G61415.2	3.2e-124	68.17	SKP1-like 21	[more]
AT2G45950.1	2.4e-119	67.13	SKP1-like 20	[more]
AT2G45950.2	2.4e-119	67.13	SKP1-like 20	[more]
AT3G21850.1	2.6e-17	37.86	SKP1-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 169..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..251
None	No IPR available	PANTHER	PTHR11165:SF140	OS03G0107000 PROTEIN	coord: 1..267
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 14..115 e-value: 2.9E-24 score: 96.6
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 17..79 e-value: 2.7E-6 score: 27.5
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 10..160 e-value: 1.6E-33 score: 118.0
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 15..79
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 116..153 e-value: 6.8E-13 score: 48.4
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 1..267
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 90..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002306.1	Sed0002306.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding