Sed0002279 (gene) Chayote v1

Overview


Name	Sed0002279
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proteophosphoglycan-like protein
Location	LG05: 33829282 .. 33833180 (-)
RNA-Seq Expression	Sed0002279
Synteny	Sed0002279

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATTAAATTCTAAGAATTCCAGCATTGCCAAGCAATCCATTTTCAATTTAATTATATATATAAATCCTCTCTTCTTTATTCTTCTTCTTCTTGATTCCCCTGTTTCTGAACAAACCCACAAATCCCATAACCTTGAAAGTTCGATTGGTTTTGAATTGGCGGTGGTGGATGGCAAAAACCAACAAATACGCCTCCATCAATTTCAATCACATCCACGAGAAGAATCTCACCGGAAAATCCAAATCTGGCAACAACAACAACAACCCCTCTAAAAACCCTTCTTCTTCCTCGTTCACTTCTGCAACTTATTCTTCCATTTCTTCCCCCAACAAATCCCATGGCCGCATGCTTGTTCTGACCCGTCCTACCCCCAAACCCATCAACCCACCGCCGCCCCTTTCCCAATCTCGACCCCCATCCGCCGATCTCACCCGTTCCCTCTCCGATTCCATCTCTCTTCGCCCTCTCGGTCGAACCGGTTCCGGCGCGGTTGCGCTCCCCGTCGCCCCCTCTCTGACCTTGGACAAGGACAAGGAGATTGCTCCTCCGGCGAAATTCGTGCCGCCTCATCTAAGGGCGGGTTTCGTCGGGAAGGAGGAGAGACATGTGAACGTTGGGATCAGATCTAGAGAGCTGAATCAGAGGCATTTTGGGAATTATGGGTCTCCGAATCGGTTCGGGGAAGACGGGCGGCCGAAGTCCGGCGGTGGGTATGAGGGGATGAGGCGGGCGGGTGAGGCAGATCTGGGGGCGGCGGCGGTGAACCGGCCGAGATCCAGTGGGAATCCGCCGAGTTTTAGTGGATGGTATGTTTCCTTTGAATACTTTGCCCTTTTGATTTGTGTGTTCTTGTCAATTAATTGAGATGATTGAGACATAAACGTGTAGTTAATTGTACTTAAAAGTGAAATTGTTTTCTGGATGCCCTTTTACGGTATTTAATGTATGGAATTGACTTTTGATTTTTATGAGATTCTCTTGATGTTTGAGGGTTGTGTGGGGATGAATCAATCAATTTATGAGTAGATTATAGAGTAGATGGCTCCTTTTGTCTAAATTAATTGTGGTATTCATACACAAACATGAAGTTAACTGTACTTATTAGAAGTTAGGATACCTTTTGGTCCTGGAGTTTAGGTATGTCATTGCTTATTTAAGTCCCGTTTGATAAAAATTTTATTTTTCGTTTTTTGTTTATGAAATTTAAGCCTACAACAACTACCTTACTATACATTTTTTTCTTATTTGGATATCTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGGAAACAAAAAAAAGTAGCTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACTTTCTTAAGGAAATATGATTACATGGTAGAAAAGATGAGCACATAGTAAGAAATTTGATTAGAAATAAGCTTAAATTTCATAAACAAAAAACAAAAAACCAAATGTTTATCAAACGGGACCTTAGATTTTTACTTTACCGTTACATTTAGATTCTGTTGGCTTTAGGTTTTTACTTTTATGGATTCTCTTGATGTTTGAGGGCTCTGTGGAGATGAATGGATCCATTTTAATTTAATGAATGAGTTTCAGAGTAGATGGGTTCAGGGTTCAGAGTAGATGGGTGCAGGTCTGATACCTCGCCTTGTGCCCTAAGCGCCTCGTAATAAAGCTCGTGTCTTCACGTGATTAATTGCAATAAGAAAGTTTTACCAACCTACATGCCAGAATTCTTCCGTTTAGGGTATTCTTATTTGCTAGCTCTTAGAGTGTATATATATATATTTTAATATTCTCACTGATCGTTATCTTTTCTTTATAAAGAATGTTATCATATATAATGTGCACAGTCCACACTTTTTTGTGCCTTGCACTTATCCCCAATAGACTATTGAACCATAGTGCGCTTTGAGCTTTTTTAAATACTGGATGGACTCCTTTTGTCTCGATTAATTAGGATTGTTGAGACATGTACTCAGTAGTTAAAACTCCCTTTGGCCTGGATGTTAAGTATGGAATAATCTTCTTTGGATGCCCTGTTACCGTTTAAGTGAGATTCGGTTGTTTACGGCTTATTTATTTTTACGAGTTTCTCTTGATTTTGAATGGCTCTGTGGAGATGAATCAATCCATTTTATCTCATGAATATATTGTAGAGTAGATGGCTTCCCTTTTTGGTCTGTCTCTGGTTTTAGACGGCTGAGTGCTGGTCTATTTCATGTAAGGTTCTCTTAGGAAAGATGAACTTTGCCTACAGAAGGTGTTTTTCTTTGATTGGAAATCTTTTCTAGAATCAGTGTGAAAAGGGGTTCAGCTTTTGGATTGGCGTTTGATTGTTTCCATTGCCTTGTGGCTTGTCAGCAAGGGAATAGAACATTATACTATTTGGTACCAATTGGCTCACGTGCTATTTACTTGAAGATTGTTTCGTGAATGTGTAGCATTGAATCTGGGAATGAGACCGTGTACGAGTTCTCTTCGTGAGGTTTACATTTTCATGGTTGAAATTTTTTGTCTTTGAGAGATGCTATGGATGCCTCCCTGAGGGGAGGAGTGTCGCAGTTGCTCGAAGGTTTGGGCTTTGAGGGTATATGCCTCCCTCGAGGTTCCAGATTCAATATCTACTTGTAACATTAATTTTGTAGATACTTTCCAATCCTATTTCCTAGGGACGGGCCAATGATGCCTTCGAGTTTAGAGGAGCCTACCTCCAAGTTTTTGGGTTATTAAAAAAAAAGAGAGAGATATGAATGCATCTCCAATTGGTTAAATCTTGATGATTGATGTGCTTGAAAATAATTTTATGATTGACGAGCTTACTTGAACGTTATCTATTTCTACAGGTTGTACAACCGTGTATTTTTTAGTTCTTTATTATTCTCGGTCTACAACCTTCACTAATTGAAATTCATGTCTACAACTTTGTCCTTGAGTTATAAAATTAAATTGTTTGAATAGTTTGTTTTGCTAAATATTTGATAATATTGAAAGTTTACATATCTGTTTAGGCCACACAGTCGATCCAGTTTCGAGTGCCTAGTAATGTAGAGACTTGAAGATTAAGAGGGGATGAGTTCAATCTATTGTGATCACCTACCTAAAATTAATTTCTTATGGATTTCTTTGACAACTAAATGTTTAGGGTCAGATTGTATCTCTCACGAGGATAGTTGAGGTGCATGTAAAACTAGCTCACACACATATAAAATAAAATTGATCTTTCTTTTATTTTTCTTGTTTTGTTCATATGATAAATAATATTATTCATATTTCTTTCATGAACCATCATTTGTGTTCTGTACTGATTTTTATGGTTGACAATAAATGGTGCTCTTCAGAGATTCATTCTGAAGTTGGACATTCTCCAAAGATGAAGATGGATCACCATTTGAACCACAAGCCAGTCAGAAATATAATTTTGTTTTCTTCTTTTTTTAGAATTCTTAGTCATGGAAGATGAACTGATACCACCAAGGTGACAGATCTCAACAATGAAGTGTCATACTTCAAAATTCAGATTGCAGCATCCAACATTTTATTGATTGGTAGTTTGCCTTCACCCTCTTCTGTTTTTATTTCGAAGCGACATATGGTTGTTTCGGAATGTAGAACTGACCAGTGTTATGCGTTGTCTTTTTCGTTATCGTTAACTGACCGGTATGGAGGACGCTCCTCCTGTGTTTTTTTACCAAGTTGTGTAAAATAAAGACTCTTCTTGTGTGAGGATTTTAGGTGTCATCATTCAGTTTGTTAATTATGGTCTATCATTGTAATTCATTGTTGAATTCTTTCGGGAGAATATGAATCAAATGCCCTTTCTAATGCAAACGCAGGTTAGGTATAAATAACTCATTTACTCCAATTTTGTAGTTTGTCAGC

mRNA sequence

CCAAATTAAATTCTAAGAATTCCAGCATTGCCAAGCAATCCATTTTCAATTTAATTATATATATAAATCCTCTCTTCTTTATTCTTCTTCTTCTTGATTCCCCTGTTTCTGAACAAACCCACAAATCCCATAACCTTGAAAGTTCGATTGGTTTTGAATTGGCGGTGGTGGATGGCAAAAACCAACAAATACGCCTCCATCAATTTCAATCACATCCACGAGAAGAATCTCACCGGAAAATCCAAATCTGGCAACAACAACAACAACCCCTCTAAAAACCCTTCTTCTTCCTCGTTCACTTCTGCAACTTATTCTTCCATTTCTTCCCCCAACAAATCCCATGGCCGCATGCTTGTTCTGACCCGTCCTACCCCCAAACCCATCAACCCACCGCCGCCCCTTTCCCAATCTCGACCCCCATCCGCCGATCTCACCCGTTCCCTCTCCGATTCCATCTCTCTTCGCCCTCTCGGTCGAACCGGTTCCGGCGCGGTTGCGCTCCCCGTCGCCCCCTCTCTGACCTTGGACAAGGACAAGGAGATTGCTCCTCCGGCGAAATTCGTGCCGCCTCATCTAAGGGCGGGTTTCGTCGGGAAGGAGGAGAGACATGTGAACGTTGGGATCAGATCTAGAGAGCTGAATCAGAGGCATTTTGGGAATTATGGGTCTCCGAATCGGTTCGGGGAAGACGGGCGGCCGAAGTCCGGCGGTGGGTATGAGGGGATGAGGCGGGCGGGTGAGGCAGATCTGGGGGCGGCGGCGGTGAACCGGCCGAGATCCAGTGGGAATCCGCCGAGTTTTAGTGGATGAGATTCATTCTGAAGTTGGACATTCTCCAAAGATGAAGATGGATCACCATTTGAACCACAAGCCAGTCAGAAATATAATTTTGTTTTCTTCTTTTTTTAGAATTCTTAGTCATGGAAGATGAACTGATACCACCAAGGTGACAGATCTCAACAATGAAGTGTCATACTTCAAAATTCAGATTGCAGCATCCAACATTTTATTGATTGGTAGTTTGCCTTCACCCTCTTCTGTTTTTATTTCGAAGCGACATATGGTTGTTTCGGAATGTAGAACTGACCAGTGTTATGCGTTGTCTTTTTCGTTATCGTTAACTGACCGGTATGGAGGACGCTCCTCCTGTGTTTTTTTACCAAGTTGTGTAAAATAAAGACTCTTCTTGTGTGAGGATTTTAGGTGTCATCATTCAGTTTGTTAATTATGGTCTATCATTGTAATTCATTGTTGAATTCTTTCGGGAGAATATGAATCAAATGCCCTTTCTAATGCAAACGCAGGTTAGGTATAAATAACTCATTTACTCCAATTTTGTAGTTTGTCAGC

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACGCCTCCATCAATTTCAATCACATCCACGAGAAGAATCTCACCGGAAAATCCAAATCTGGCAACAACAACAACAACCCCTCTAAAAACCCTTCTTCTTCCTCGTTCACTTCTGCAACTTATTCTTCCATTTCTTCCCCCAACAAATCCCATGGCCGCATGCTTGTTCTGACCCGTCCTACCCCCAAACCCATCAACCCACCGCCGCCCCTTTCCCAATCTCGACCCCCATCCGCCGATCTCACCCGTTCCCTCTCCGATTCCATCTCTCTTCGCCCTCTCGGTCGAACCGGTTCCGGCGCGGTTGCGCTCCCCGTCGCCCCCTCTCTGACCTTGGACAAGGACAAGGAGATTGCTCCTCCGGCGAAATTCGTGCCGCCTCATCTAAGGGCGGGTTTCGTCGGGAAGGAGGAGAGACATGTGAACGTTGGGATCAGATCTAGAGAGCTGAATCAGAGGCATTTTGGGAATTATGGGTCTCCGAATCGGTTCGGGGAAGACGGGCGGCCGAAGTCCGGCGGTGGGTATGAGGGGATGAGGCGGGCGGGTGAGGCAGATCTGGGGGCGGCGGCGGTGAACCGGCCGAGATCCAGTGGGAATCCGCCGAGTTTTAGTGGATGA

Protein sequence

MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLSQSRPPSADLTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPAKFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

Homology

[Close]

BLAST of Sed0002279 vs. NCBI nr
Match: XP_038888443.1 (translation initiation factor IF-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 5.4e-70
Identity = 169/241 (70.12%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP---------SSSSFTSATYSSIS 60
           MAKTNKY SINFNHI++KNL+  SK+G   NNPSKNP         SSSSF SATYSSIS
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTG---NNPSKNPSSSSSSSSSSSSSFASATYSSIS 60

Query: 61  SPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD---------LTRSLSDSISLRP 120
           SPNKSHGRMLVLTRPTPKPI  PPPLS   Q RPPSAD           +S SDSISLRP
Sbjct: 61  SPNKSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRP 120

Query: 121 LGRTGSGAVALPVAPSLTLDKDKEIAPPA--------KFVPPHLRAGFVGKEERHVNVGI 180
           LGRTG+G +A    PS  L+KDKEI PPA        KFVPPHLRAGFVGKEER VNVGI
Sbjct: 121 LGRTGTGGIAPSPIPS--LEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGI 180

Query: 181 RSRELNQRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFS 213
           RSRE NQR +GNYGSP+R+GEDGRPKSGGGYE M+ AGEA+LG A VNRPRSSGN PS S
Sbjct: 181 RSREANQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLG-AMVNRPRSSGNRPSSS 235

[Close]

BLAST of Sed0002279 vs. NCBI nr
Match: XP_038888444.1 (putative protein TPRXL isoform X2 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 5.4e-70
Identity = 169/241 (70.12%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP---------SSSSFTSATYSSIS 60
           MAKTNKY SINFNHI++KNL+  SK+G   NNPSKNP         SSSSF SATYSSIS
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTG---NNPSKNPSSSSSSSSSSSSSFASATYSSIS 60

Query: 61  SPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD---------LTRSLSDSISLRP 120
           SPNKSHGRMLVLTRPTPKPI  PPPLS   Q RPPSAD           +S SDSISLRP
Sbjct: 61  SPNKSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRP 120

Query: 121 LGRTGSGAVALPVAPSLTLDKDKEIAPPA--------KFVPPHLRAGFVGKEERHVNVGI 180
           LGRTG+G +A    PS  L+KDKEI PPA        KFVPPHLRAGFVGKEER VNVGI
Sbjct: 121 LGRTGTGGIAPSPIPS--LEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGI 180

Query: 181 RSRELNQRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFS 213
           RSRE NQR +GNYGSP+R+GEDGRPKSGGGYE M+ AGEA+LG A VNRPRSSGN PS S
Sbjct: 181 RSREANQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLG-AMVNRPRSSGNRPSSS 235

[Close]

BLAST of Sed0002279 vs. NCBI nr
Match: XP_004144518.1 (uncharacterized protein LOC101206223 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 7.2e-67
Identity = 162/233 (69.53%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSH 60
           MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSH
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSS-SSSSFATATYSSISSPNKSH 60

Query: 61  GRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTGSG 120
           GRMLVLTRPTP+PI  P PLS   QSRP SAD          +S SDSISLRPLGRTG+G
Sbjct: 61  GRMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTG 120

Query: 121 AVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQR 180
           A+A   +P   L+KD+EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR
Sbjct: 121 AIA--PSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQR 180

Query: 181 HFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
            +GNYGS  R+GEDGRPKSGGGYE M+  GEADLG A VNRPRSSGN PS SG
Sbjct: 181 QYGNYGSSGRYGEDGRPKSGGGYERMKEVGEADLG-AMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Sed0002279 vs. NCBI nr
Match: XP_008455486.1 (PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_008455487.1 PREDICTED: translation initiation factor IF-2 isoform X2 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 1.8e-65
Identity = 161/233 (69.10%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSH 60
           MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSH
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSS-SSSSFATATYSSISSPNKSH 60

Query: 61  GRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTGSG 120
           GRMLVLTRPTPKPI  P  LS   QSRP SAD          +S SDSISLRPLGRTG+G
Sbjct: 61  GRMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTG 120

Query: 121 AVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQR 180
           A+A   +P   L+K++EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR
Sbjct: 121 AIA--PSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQR 180

Query: 181 HFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
            +GNYGS +R+GEDGRPKSGGGYE M+  GEADLG A VNRPRSSGN PS SG
Sbjct: 181 QYGNYGSSSRYGEDGRPKSGGGYERMKGVGEADLG-AMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Sed0002279 vs. NCBI nr
Match: XP_023554573.1 (uncharacterized protein LOC111811777 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.5 bits (659), Expect = 5.2e-65
Identity = 160/235 (68.09%), Postives = 176/235 (74.89%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNK 60
           MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP     SSSSF SATYSSISS NK
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTG---NNPSKNPSSSSSSSSSFASATYSSISSANK 60

Query: 61  SHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTG 120
           SHGRMLVLTRPTPKPI+ PP LS   QSR PSAD          +  SDSISLRPLGRTG
Sbjct: 61  SHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTG 120

Query: 121 SGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELN 180
           +GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER VNVGIRSRE N
Sbjct: 121 TGAIA--PSPIPNLEKDKEIPPPTVTLHKTEKFVPPHLRAGFVGKEERPVNVGIRSREAN 180

Query: 181 QRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
           QR +GNYGSP R+GEDGRPKSGG YE +  AGEAD G A VNRPRSSGN P+ SG
Sbjct: 181 QRQYGNYGSPGRYGEDGRPKSGGAYERVNGAGEADQG-AMVNRPRSSGNHPNSSG 229

[Close]

BLAST of Sed0002279 vs. ExPASy TrEMBL
Match: A0A0A0K3D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.5e-67
Identity = 162/233 (69.53%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSH 60
           MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSH
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSS-SSSSFATATYSSISSPNKSH 60

Query: 61  GRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTGSG 120
           GRMLVLTRPTP+PI  P PLS   QSRP SAD          +S SDSISLRPLGRTG+G
Sbjct: 61  GRMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTG 120

Query: 121 AVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQR 180
           A+A   +P   L+KD+EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR
Sbjct: 121 AIA--PSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQR 180

Query: 181 HFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
            +GNYGS  R+GEDGRPKSGGGYE M+  GEADLG A VNRPRSSGN PS SG
Sbjct: 181 QYGNYGSSGRYGEDGRPKSGGGYERMKEVGEADLG-AMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Sed0002279 vs. ExPASy TrEMBL
Match: A0A1S3C160 (translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495638 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.6e-66
Identity = 161/233 (69.10%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSH 60
           MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSH
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSS-SSSSFATATYSSISSPNKSH 60

Query: 61  GRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTGSG 120
           GRMLVLTRPTPKPI  P  LS   QSRP SAD          +S SDSISLRPLGRTG+G
Sbjct: 61  GRMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTG 120

Query: 121 AVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQR 180
           A+A   +P   L+K++EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR
Sbjct: 121 AIA--PSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQR 180

Query: 181 HFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
            +GNYGS +R+GEDGRPKSGGGYE M+  GEADLG A VNRPRSSGN PS SG
Sbjct: 181 QYGNYGSSSRYGEDGRPKSGGGYERMKGVGEADLG-AMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Sed0002279 vs. ExPASy TrEMBL
Match: A0A6J1GJZ3 (uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 160/235 (68.09%), Postives = 176/235 (74.89%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNK 60
           MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP     SSSSF SATYSSISS NK
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTG---NNPSKNPSSSSSSSSSFASATYSSISSANK 60

Query: 61  SHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTG 120
           SHGRMLVLTRPTPKPI+ PP LS   QSR PSAD          +  SDSISLRPLGRTG
Sbjct: 61  SHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTG 120

Query: 121 SGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELN 180
           +GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER V+VGIRSRE N
Sbjct: 121 TGAIA--PSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREAN 180

Query: 181 QRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
           QR +GNYGSP R+GEDGRPKSGG YE M  AGEAD G A VNRPRSSGN P+ SG
Sbjct: 181 QRQYGNYGSPGRYGEDGRPKSGGAYERMNGAGEADQG-AMVNRPRSSGNRPNSSG 229

[Close]

BLAST of Sed0002279 vs. ExPASy TrEMBL
Match: A0A6J1GK55 (uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 160/235 (68.09%), Postives = 176/235 (74.89%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNK 60
           MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP     SSSSF SATYSSISS NK
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTG---NNPSKNPSSSSSSSSSFASATYSSISSANK 60

Query: 61  SHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRTG 120
           SHGRMLVLTRPTPKPI+ PP LS   QSR PSAD          +  SDSISLRPLGRTG
Sbjct: 61  SHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTG 120

Query: 121 SGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELN 180
           +GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER V+VGIRSRE N
Sbjct: 121 TGAIA--PSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREAN 180

Query: 181 QRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
           QR +GNYGSP R+GEDGRPKSGG YE M  AGEAD G A VNRPRSSGN P+ SG
Sbjct: 181 QRQYGNYGSPGRYGEDGRPKSGGAYERMNGAGEADQG-AMVNRPRSSGNRPNSSG 229

[Close]

BLAST of Sed0002279 vs. ExPASy TrEMBL
Match: A0A6J1I0F0 (uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468300 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.9e-63
Identity = 158/236 (66.95%), Postives = 173/236 (73.31%), Query Frame = 0


Query: 1   MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP------SSSSFTSATYSSISSPN 60
           MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP      SSSSF SATYSSISS N
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTG---NNPSKNPSSSSSSSSSSFASATYSSISSAN 60

Query: 61  KSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------LTRSLSDSISLRPLGRT 120
           KSHGRMLVLTRPTPKPI+  P LS   QSR PSAD          +  SDSISLRPLGRT
Sbjct: 61  KSHGRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRT 120

Query: 121 GSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSREL 180
           G+GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER VNVGIRSRE 
Sbjct: 121 GTGAIA--PSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
           NQR +GNYGSP R+GEDGRPKSGG  E M  AGEAD G   VNRPRSSGN P+ SG
Sbjct: 181 NQRQYGNYGSPGRYGEDGRPKSGGANERMNGAGEADQG-EMVNRPRSSGNRPNSSG 230

[Close]

BLAST of Sed0002279 vs. TAIR 10
Match: AT3G54680.1 (proteophosphoglycan-related )

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-19
Identity = 93/237 (39.24%), Postives = 124/237 (52.32%), Query Frame = 0


Query: 5   NKYASINFNHIHEKNLTGKSKSGNNNNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLT 64
           NKY SINFNHI  K            + PS   SSSS +SA+YSS++   +S+GRMLVLT
Sbjct: 7   NKYTSINFNHILHK------------DPPS---SSSSSSSASYSSVA---RSNGRMLVLT 66

Query: 65  RPTPKPINPP---PPLSQSRPPSADLTR-----SLSD----SISLRPLGRTG-SGAVALP 124
           + +PKP+  P   P  + + PP +   R     ++SD     ISLRPLG TG S +++ P
Sbjct: 67  KSSPKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLSFP 126

Query: 125 V-------APSLTLDKDKEIAP-PAKFVPPHLRAGFVGKEERHVNVGIRSRE----LNQR 184
           +       AP +       ++P P +FVPPHLR GFV K+E+      R R+    LNQR
Sbjct: 127 IRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLNQR 186

Query: 185 HFGNYGSPNR----FGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG 213
              N   P +    +G+ GRPKS GGYE +R              PR +GN P  SG
Sbjct: 187 -LPNQEQPRQEYFGYGQPGRPKS-GGYERIR------------TDPRITGNRPGTSG 211

The following BLAST results are available for this feature:

BLAST of Sed0002279 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888443.1	5.4e-70	70.12	translation initiation factor IF-2 isoform X1 [Benincasa hispida]	[more]
XP_038888444.1	5.4e-70	70.12	putative protein TPRXL isoform X2 [Benincasa hispida]	[more]
XP_004144518.1	7.2e-67	69.53	uncharacterized protein LOC101206223 [Cucumis sativus]	[more]
XP_008455486.1	1.8e-65	69.10	PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_0084...	[more]
XP_023554573.1	5.2e-65	68.09	uncharacterized protein LOC111811777 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002279 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002279 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3D7	3.5e-67	69.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1	[more]
A0A1S3C160	8.6e-66	69.10	translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1GJZ3	3.3e-65	68.09	uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GK55	3.3e-65	68.09	uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I0F0	8.9e-63	66.95	uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Sed0002279 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54680.1	4.6e-19	39.24	proteophosphoglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002279.1	Sed0002279.1	mRNA
Sed0002279.2	Sed0002279.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process