Sed0002240 (gene) Chayote v1

Overview


Name	Sed0002240
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor TCP5-like
Location	LG12: 31003969 .. 31005963 (+)
RNA-Seq Expression	Sed0002240
Synteny	Sed0002240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCTTCTTTCCTTTACCCATCATATTGTCATTCTTGTGCTAAATTTTTGATTCCTTGCAAAGAAGGAAGTTCTTAGAGAATTATTTGACTCCAAAAAGTCAGCTGTTTCTTGGTTCAACAGTCTTGATCTTCTTCTTCCAACTTTTTTTTTTTTTAAATTTTTGGTGAACAGTTGAGCCAACAACCACCAACAACTGATTTCTGGTTAAGCTTCAACCTTGAGTTTGGGAGTTTTTCAAATGTAAGTTCAACCCACAAATCATTGGATTTTGTTTTAGATTATTGTCTTATATTTCTTGAAATTTTCCAATGGATCTACAAGAGCTATGTTTTTTTTTTTGGAAAAAAAAAACTTCTAAAGAGAGTAAGTAAAATATATATACATATAAACTATGGAGAATTACAATTTAGAAAAATCATGGTGCAAGAATCACAAATCTCTAAACACCTTAGATTTTTAAACATCAAGAAGTTTCATTAGTTACATCTATAAACTTGCATTAGTTATTATTATTATTATTATTTTGGTTTCCTAGTTCTAATCAATTTCTATAATTTTTTTTCTTAGTTGATATCCAGCCCCATCTTATAAAATAATTCAAGCTTATTTTGTCTGATTTTTGAAGATGAAGATGGAGCAAAAACAATGAAGATCATCAATTCATAAAAAAAAAAAATGTTGAAAAATTCAAAAGAAAAGGGAAATTTTGAAGCAAAAGAGGAAGGAATTAGCAGTGATGGAAAATATAATTTCCCCAAAGCTCCAAGTACAAGTAATTCTAGGCAATGGTCAGGCTTTAGAAATCCAAGAATTGTTAGAGTTTCACGTTCATTTGGTGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATCGAAGAATTAGGCTTTCGGTTCCAACCGCTATTCAACTCTACGATCTTCAAGACAAGCTCAAGCTTGGCCAGCCTAGCAAGGTCATCGATTGGCTTCTCGACGTCACGAAACTCGATATCGACAAGCTCCCACCTCTCCCCATCCCGACCGGATTCTCCCCATTTCACCAACATATGCTCTTCCCTCCCTATGATAGTTCTAGTATTGCTTCTTCCTCTTCGCAATTTTGTTCGCTTCCTCCTTCTGCTCCTCCTCCTCGGTTCGCCCTTGATGCGTTGCATATCCGAGATGTTGAGAGTCAAACGGCGATGGAGAAAACGAAGAATTGGGATGTTATGGATTTAGGGAAACAAGAAAAGGCATCTTCAGCAATGAAAGGGAAGTGGATTGTTGATGGAGGTAATAGTAATCAACAAATTGAAAATTACAATTCTAATGGTTACAATTACAATTCTTGTGATCAGCCTTCTTGTTTGTCACTTTCACAATTTGGGAACAATAATAATGGAGTTTTTAATCCATCTCAAGTTGAGGCAGCTCAAACAAGTTCTTCTTCTAGTTCTTCACTTTTTTTCACTCCTTATGCTTCTTACATCACCAACCCATTTGAAAACCATATCCATCTCTTGGGCTCAAATTCTCATGCTTTGTCCAATCCCTTCATGTCTTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCTCCAGATTTCAATCTCAAGCACCACGGTGGCTCTGGTAAAGACGGGGCCATCCGGTGACGCATAGAGTGACCGTGGAGAATAGGGACGAAGCGCCAAAGAAGAAGGGAGGAGACCATATTGTCCCTAGTTCATCCTTAGATGACAAGAATTTATATAAGAAAGTTAAGATTGTTAAGTTTTTTTATCTCTAATTTTTCGAGGGTTTTCTTCGTGATCATAGTAAACGATAATGATAGTTCAATTAGACATGTAATGTGTGTGTTGGGTCCTTTTAGATTCTTAACAATGCAAGTTAGATTACAAACTCTCTCTTGAAGGATGTGCTTTGGAGCTGAACTTCTTCAGAAGAACTTGTAGAAAAGTGAACTTGTTTGGAAAAGTTTGTAAGAACCAT

mRNA sequence

CATCTTCTTTCCTTTACCCATCATATTGTCATTCTTGTGCTAAATTTTTGATTCCTTGCAAAGAAGGAAGTTCTTAGAGAATTATTTGACTCCAAAAAGTCAGCTGTTTCTTGGTTCAACAGTCTTGATCTTCTTCTTCCAACTTTTTTTTTTTTTAAATTTTTGGTGAACAGTTGAGCCAACAACCACCAACAACTGATTTCTGGTTAAGCTTCAACCTTGAGTTTGGGAGTTTTTCAAATATGAAGATGGAGCAAAAACAATGAAGATCATCAATTCATAAAAAAAAAAAATGTTGAAAAATTCAAAAGAAAAGGGAAATTTTGAAGCAAAAGAGGAAGGAATTAGCAGTGATGGAAAATATAATTTCCCCAAAGCTCCAAGTACAAGTAATTCTAGGCAATGGTCAGGCTTTAGAAATCCAAGAATTGTTAGAGTTTCACGTTCATTTGGTGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATCGAAGAATTAGGCTTTCGGTTCCAACCGCTATTCAACTCTACGATCTTCAAGACAAGCTCAAGCTTGGCCAGCCTAGCAAGGTCATCGATTGGCTTCTCGACGTCACGAAACTCGATATCGACAAGCTCCCACCTCTCCCCATCCCGACCGGATTCTCCCCATTTCACCAACATATGCTCTTCCCTCCCTATGATAGTTCTAGTATTGCTTCTTCCTCTTCGCAATTTTGTTCGCTTCCTCCTTCTGCTCCTCCTCCTCGGTTCGCCCTTGATGCGTTGCATATCCGAGATGTTGAGAGTCAAACGGCGATGGAGAAAACGAAGAATTGGGATGTTATGGATTTAGGGAAACAAGAAAAGGCATCTTCAGCAATGAAAGGGAAGTGGATTGTTGATGGAGGTAATAGTAATCAACAAATTGAAAATTACAATTCTAATGGTTACAATTACAATTCTTGTGATCAGCCTTCTTGTTTGTCACTTTCACAATTTGGGAACAATAATAATGGAGTTTTTAATCCATCTCAAGTTGAGGCAGCTCAAACAAGTTCTTCTTCTAGTTCTTCACTTTTTTTCACTCCTTATGCTTCTTACATCACCAACCCATTTGAAAACCATATCCATCTCTTGGGCTCAAATTCTCATGCTTTGTCCAATCCCTTCATGTCTTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCTCCAGATTTCAATCTCAAGCACCACGGTGGCTCTGGTAAAGACGGGGCCATCCGGTGACGCATAGAGTGACCGTGGAGAATAGGGACGAAGCGCCAAAGAAGAAGGGAGGAGACCATATTGTCCCTAGTTCATCCTTAGATGACAAGAATTTATATAAGAAAGTTAAGATTGTTAAGTTTTTTTATCTCTAATTTTTCGAGGGTTTTCTTCGTGATCATAGTAAACGATAATGATAGTTCAATTAGACATGTAATGTGTGTGTTGGGTCCTTTTAGATTCTTAACAATGCAAGTTAGATTACAAACTCTCTCTTGAAGGATGTGCTTTGGAGCTGAACTTCTTCAGAAGAACTTGTAGAAAAGTGAACTTGTTTGGAAAAGTTTGTAAGAACCAT

Coding sequence (CDS)

ATGTTGAAAAATTCAAAAGAAAAGGGAAATTTTGAAGCAAAAGAGGAAGGAATTAGCAGTGATGGAAAATATAATTTCCCCAAAGCTCCAAGTACAAGTAATTCTAGGCAATGGTCAGGCTTTAGAAATCCAAGAATTGTTAGAGTTTCACGTTCATTTGGTGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATCGAAGAATTAGGCTTTCGGTTCCAACCGCTATTCAACTCTACGATCTTCAAGACAAGCTCAAGCTTGGCCAGCCTAGCAAGGTCATCGATTGGCTTCTCGACGTCACGAAACTCGATATCGACAAGCTCCCACCTCTCCCCATCCCGACCGGATTCTCCCCATTTCACCAACATATGCTCTTCCCTCCCTATGATAGTTCTAGTATTGCTTCTTCCTCTTCGCAATTTTGTTCGCTTCCTCCTTCTGCTCCTCCTCCTCGGTTCGCCCTTGATGCGTTGCATATCCGAGATGTTGAGAGTCAAACGGCGATGGAGAAAACGAAGAATTGGGATGTTATGGATTTAGGGAAACAAGAAAAGGCATCTTCAGCAATGAAAGGGAAGTGGATTGTTGATGGAGGTAATAGTAATCAACAAATTGAAAATTACAATTCTAATGGTTACAATTACAATTCTTGTGATCAGCCTTCTTGTTTGTCACTTTCACAATTTGGGAACAATAATAATGGAGTTTTTAATCCATCTCAAGTTGAGGCAGCTCAAACAAGTTCTTCTTCTAGTTCTTCACTTTTTTTCACTCCTTATGCTTCTTACATCACCAACCCATTTGAAAACCATATCCATCTCTTGGGCTCAAATTCTCATGCTTTGTCCAATCCCTTCATGTCTTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCTCCAGATTTCAATCTCAAGCACCACGGTGGCTCTGGTAAAGACGGGGCCATCCGGTGA

Protein sequence

MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHQHMLFPPYDSSSIASSSSQFCSLPPSAPPPRFALDALHIRDVESQTAMEKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYNSNGYNYNSCDQPSCLSLSQFGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFMSSPLQPFGSQNLKPFPPDFNLKHHGGSGKDGAIR

Homology

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BLAST of Sed0002240 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-109
Identity = 248/346 (71.68%), Postives = 268/346 (77.46%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML++SKEKG  EAK+EGI  DGKY+FP+AP  ++SRQWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRDSKEKG-CEAKQEGI-IDGKYSFPRAP--TSSRQWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IP 
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPA 120

Query: 121 GFSPFHQHM-LFP-PYDSSSIASSSSQFCSLPPSAPPPRFALDALHIRDVE-SQTAMEKT 180
           GFS FH  M LFP  YD SS  SSSSQFCSLP       FA+D         +QT MEKT
Sbjct: 121 GFSQFHHPMSLFPAQYDYSS--SSSSQFCSLPHP-----FAVDTKDSTTTHLNQTTMEKT 180

Query: 181 KNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYN--------------SNGYNYNSC 240
           K WD  DL  QEKAS A KGKWI D G+++QQ+E+YN              SN Y+YN+C
Sbjct: 181 KLWDT-DLVPQEKASLATKGKWI-DHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTC 240

Query: 241 DQPSCLSLSQFGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSN 300
           D       SQFGNNNNGVF PSQVE AQTSSSS S+LFFTPYASYITNPFE+HIH L SN
Sbjct: 241 DHQH----SQFGNNNNGVF-PSQVE-AQTSSSSGSALFFTPYASYITNPFESHIHFLSSN 300

Query: 301 SHALSNPFM--SSPLQPFGSQNLKPFPPDFNLK---HHGGSGKDGA 325
           SHAL NPFM  +SPLQPFGSQNLKPFP +FNLK   H GGSGKDGA
Sbjct: 301 SHALPNPFMPPNSPLQPFGSQNLKPFPANFNLKQLLHDGGSGKDGA 327

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BLAST of Sed0002240 vs. NCBI nr
Match: XP_022987421.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 382.9 bits (982), Expect = 2.8e-102
Identity = 234/340 (68.82%), Postives = 254/340 (74.71%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML+NSKEKG FE+KEE     GKY FPKAP++S+  QWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRNSKEKG-FESKEE-----GKYRFPKAPTSSS--QWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IPT
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPT 120

Query: 121 GFSPFHQHMLFPPYDSS-----SIASSSSQFCSLPPSAPPPRFALDALHIRDVESQTAME 180
           GFSPFHQ M FPPYD         +SSSSQFC+   S PPP     A++++   S TA+E
Sbjct: 121 GFSPFHQQMFFPPYDDQHHHHHHSSSSSSQFCN---SLPPP----FAVNVKGDSSSTAVE 180

Query: 181 KTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYNSNGYN-YNSCDQPSCLSLSQF 240
           KTK WD MDL  Q KASS  KGKWI   G+SNQ +E+YN   YN YNS         SQF
Sbjct: 181 KTKIWD-MDLALQGKASSLTKGKWI--DGSSNQHVEDYNFTPYNSYNS---------SQF 240

Query: 241 GNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFMSS 300
           G NNNGVF PSQ+E A TSSSS+S+LFFTPYASYITNPFE+HIH L SNSHALSNPF+ S
Sbjct: 241 G-NNNGVF-PSQIE-APTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPS 300

Query: 301 PLQPFGSQNLKPF-PPDFNLKH--HGGSG-------KDGA 325
            L PF SQNLKPF    FN K   H   G       KDGA
Sbjct: 301 ALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGA 310

[Close]

BLAST of Sed0002240 vs. NCBI nr
Match: KAG6589600.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382.5 bits (981), Expect = 3.7e-102
Identity = 232/322 (72.05%), Postives = 249/322 (77.33%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML+NSKEKG FE+KEE     GKY FPKAP  ++SRQWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRNSKEKG-FESKEE-----GKYRFPKAP--TSSRQWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IPT
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPT 120

Query: 121 GFSPFHQHMLFPPYD------SSSIASSSSQFCSLPPSAPPPRFALDALHIRDVESQTAM 180
           GFSPFHQ MLFPPYD      SSS +SSSSQFC+   S PPP FA+D           ++
Sbjct: 121 GFSPFHQQMLFPPYDHHHHYSSSSSSSSSSQFCN---SLPPP-FAVDM-------KGDSI 180

Query: 181 EKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYNSNGYN-YNSCDQPSCLSLSQ 240
           EKTK WD MDL  Q KASS  KGKWI   G+SNQ +E+YN   YN YNS         SQ
Sbjct: 181 EKTKIWD-MDLALQGKASSLTKGKWI--DGSSNQHVEDYNFTPYNTYNS---------SQ 240

Query: 241 FGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFMS 300
           FG NNNGVF PSQ+E A TSSSS+S+LFFTPYASYITNPFE+HIH L SNSHALSNPF+ 
Sbjct: 241 FG-NNNGVF-PSQIE-APTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP 288

Query: 301 SPLQPFGSQNLKPF-PPDFNLK 315
           S L PF SQNLKPF    FN K
Sbjct: 301 SALHPFASQNLKPFSAASFNFK 288

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BLAST of Sed0002240 vs. NCBI nr
Match: XP_038879592.1 (transcription factor TCP5-like [Benincasa hispida])

HSP 1 Score: 381.7 bits (979), Expect = 6.3e-102
Identity = 247/376 (65.69%), Postives = 264/376 (70.21%), Query Frame = 0


Query: 1   MLKN--SKEKGNFEAKEEGISS-----DGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSF 60
           ML+N  SKEKG  EAKEEGI S     DGKY+F KA STS SRQWSGFRNPRIVRVSRSF
Sbjct: 1   MLRNNSSKEKG-CEAKEEGIRSSNNNDDGKYSFSKAASTS-SRQWSGFRNPRIVRVSRSF 60

Query: 61  GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKL 120
           GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID L
Sbjct: 61  GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNL 120

Query: 121 PPLPIPTGFSPFHQHMLFPPYDSS----SIASSSSQFC-SLPPSAPPPRFALDALHIRDV 180
           PPL IP GFSPFHQ MLFP YD      S +SSSS+ C SLPP  PPP FALD   I   
Sbjct: 121 PPLQIPPGFSPFHQQMLFPQYDPHHHYYSTSSSSSRLCNSLPPPPPPPSFALDVKGIDAY 180

Query: 181 ESQTAMEKTKNWDVMDLGKQEKASSA----MKGKWIVDGGN--SNQQIENYNS------- 240
           ++   +EKTK WDV DLG QEKA++A     KGKWI DG N  ++QQ+E+YN        
Sbjct: 181 QTTMTVEKTKLWDV-DLGLQEKAAAATTATTKGKWI-DGSNTTNSQQVEDYNEQISSQKL 240

Query: 241 -----------NGYNYNSC---DQPSCLSLSQFGNNN---NGVFNPSQVEAA---QTSSS 300
                      N  N NS    +  SCLSLSQFGNNN   NG F    VEAA    TSSS
Sbjct: 241 LSMAICSSNLPNMMNNNSTPYNNYNSCLSLSQFGNNNNDDNGNFPSQLVEAAAQTSTSSS 300

Query: 301 SSSSLFFTPYASYITNPFENHIHLLGSNSHA-LSNPFM-SSPLQPFGSQNLKPF-PPDFN 327
           S+SSLFFTPYASYITNPFE+HIH L SNSH  LSNPFM +S L PF SQNLKPF PP FN
Sbjct: 301 SNSSLFFTPYASYITNPFESHIHFLSSNSHVNLSNPFMPNSSLHPFASQNLKPFPPPSFN 360

[Close]

BLAST of Sed0002240 vs. NCBI nr
Match: XP_023516672.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.9 bits (977), Expect = 1.1e-101
Identity = 237/341 (69.50%), Postives = 254/341 (74.49%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML+NSKEKG FE+KEE     GKY FPKAP  ++SRQWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRNSKEKG-FESKEE-----GKYRFPKAP--TSSRQWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IPT
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPT 120

Query: 121 GFSPFHQHMLFPPYD------SSSIASSSSQFCSLPPSAPPPRFALDALHIRDVESQTAM 180
           GFSPFHQ MLFPPYD      SSS +SSSSQFC+   S P P FA+D          TA+
Sbjct: 121 GFSPFHQQMLFPPYDHHHHYYSSSSSSSSSQFCN---SLPLP-FAVDV-----KGDSTAI 180

Query: 181 EKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYNSNGYN-YNSCDQPSCLSLSQ 240
           EKTK WD MDL  Q KASS  KGKW+   G+SNQ +E+YN   YN YNS         SQ
Sbjct: 181 EKTKIWD-MDLALQGKASSLTKGKWV--DGSSNQHVEDYNFTPYNTYNS---------SQ 240

Query: 241 FGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFMS 300
           FG NNNGVF PSQ+E A TSSSS+S+LFFTPYASYITNPFE+HIH L SN HALSNPF+ 
Sbjct: 241 FG-NNNGVF-PSQIE-APTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFVP 300

Query: 301 SPLQPFGSQNLKPF-PPDFNLKH--HGGSG-------KDGA 325
           S L PF SQNLKPF    FN K   H   G       KDGA
Sbjct: 301 SALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGA 309

[Close]

BLAST of Sed0002240 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.9e-41
Identity = 115/279 (41.22%), Postives = 149/279 (53.41%), Query Frame = 0


Query: 31  STSNSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDK 90
           S S+SRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+
Sbjct: 38  SVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDR 97

Query: 91  LKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHQHMLFPPYDSSSIASSSSQFCSL 150
           L L QPSKVIDWLL+  K D+DKLPPL  P GF+  + +++F           +S F   
Sbjct: 98  LGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF----------GNSGFGES 157

Query: 151 PPSAPPPRFALDALHIRDVESQTAMEKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQ 210
           P S     F    L   +        +T+         Q ++    KGKWI +  NSNQ 
Sbjct: 158 PSSTTSTTFPGTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDENSNQD 217

Query: 211 IENYNSN--------------------GYNYNSCDQPS---CLSLSQFGNNNNGVFNPSQ 270
            + +N+N                    G+   S DQ      +++S    NNN   N   
Sbjct: 218 HQGFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLN--- 277

Query: 271 VEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSH 286
           +    +S+   S LFF P    +++ F  +   LG++ H
Sbjct: 278 LHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHH 303

[Close]

BLAST of Sed0002240 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.4e-33
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 3   KNSKEKGNFEAKEEGISSDGKYNFPKAPS--TSNSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           +  +E    + + E  ++ GK    K P+  +S+S  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPLPI P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSPFHQHMLF 132
             FS F+ H  F
Sbjct: 140 ENFSIFNHHQSF 151

[Close]

BLAST of Sed0002240 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-30
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 41  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 100
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 101 WLLDVTKLDIDKLPPLPIPTGFSPFHQHM 130
           WLL+V K D+D LPPL  P GF   + ++
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNL 107

[Close]

BLAST of Sed0002240 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.8e-18
Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 45  RIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLD 104
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L   QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 105 VTKLDIDKLPPL---PIPTGFSPFHQHMLFPPYDSSSIASSSSQFCSLPPSAPPPRFALD 164
             +  I +LP L     PT     HQ+       ++S++ S+    S   S      +L 
Sbjct: 92  AAEDSISELPSLNNTHFPTD-DENHQNQTLTTVAANSLSKSACSSNS-DTSKNSSGLSLS 151

Query: 165 ALHIRDVESQTAMEKT 178
              +RD   + A E+T
Sbjct: 152 RSELRDKARERARERT 165

[Close]

BLAST of Sed0002240 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17
Identity = 98/292 (33.56%), Postives = 130/292 (44.52%), Query Frame = 0


Query: 31  STSNSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL 90
           +T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L
Sbjct: 27  NTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRL 86

Query: 91  KLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHQHMLFPPYDSSSIASSSSQFCSLP 150
              QPSK ++WL++     I  LP L   T F    Q+       + S  SS +   SL 
Sbjct: 87  GFDQPSKAVEWLINAASDSITDLPLL--NTNFDHLDQNQ----NQTKSACSSGTSESSL- 146

Query: 151 PSAPPPRFALDALHIRDVESQTAMEKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQI 210
                   +L    IR    + A E+T      DL     + + +        G  +QQ 
Sbjct: 147 -------LSLSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLL------TGGFDQQP 206

Query: 211 ENYNSNGYNYNSCDQPSCLSLSQFGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYIT 270
            N N  G   + C  P  L +    +        S V       SSSSS     Y+S  T
Sbjct: 207 SNRNWTG--GSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGT 266

Query: 271 NPFENHIHLLGSNSHALSNPFM---SSPLQPFGSQNLKPF---PPDFNLKHH 317
               +    L +N++      +   SS   P  SQ++  F   PP   L HH
Sbjct: 267 LQSNSQSLFLNNNNNITQRSSISSSSSSSSPMDSQSISFFMATPPP--LDHH 293

[Close]

BLAST of Sed0002240 vs. ExPASy TrEMBL
Match: A0A6J1C023 (transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 5.2e-110
Identity = 248/346 (71.68%), Postives = 268/346 (77.46%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML++SKEKG  EAK+EGI  DGKY+FP+AP  ++SRQWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRDSKEKG-CEAKQEGI-IDGKYSFPRAP--TSSRQWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IP 
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPA 120

Query: 121 GFSPFHQHM-LFP-PYDSSSIASSSSQFCSLPPSAPPPRFALDALHIRDVE-SQTAMEKT 180
           GFS FH  M LFP  YD SS  SSSSQFCSLP       FA+D         +QT MEKT
Sbjct: 121 GFSQFHHPMSLFPAQYDYSS--SSSSQFCSLPHP-----FAVDTKDSTTTHLNQTTMEKT 180

Query: 181 KNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYN--------------SNGYNYNSC 240
           K WD  DL  QEKAS A KGKWI D G+++QQ+E+YN              SN Y+YN+C
Sbjct: 181 KLWDT-DLVPQEKASLATKGKWI-DHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTC 240

Query: 241 DQPSCLSLSQFGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSN 300
           D       SQFGNNNNGVF PSQVE AQTSSSS S+LFFTPYASYITNPFE+HIH L SN
Sbjct: 241 DHQH----SQFGNNNNGVF-PSQVE-AQTSSSSGSALFFTPYASYITNPFESHIHFLSSN 300

Query: 301 SHALSNPFM--SSPLQPFGSQNLKPFPPDFNLK---HHGGSGKDGA 325
           SHAL NPFM  +SPLQPFGSQNLKPFP +FNLK   H GGSGKDGA
Sbjct: 301 SHALPNPFMPPNSPLQPFGSQNLKPFPANFNLKQLLHDGGSGKDGA 327

[Close]

BLAST of Sed0002240 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.4e-102
Identity = 234/340 (68.82%), Postives = 254/340 (74.71%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML+NSKEKG FE+KEE     GKY FPKAP++S+  QWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRNSKEKG-FESKEE-----GKYRFPKAPTSSS--QWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL IPT
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPT 120

Query: 121 GFSPFHQHMLFPPYDSS-----SIASSSSQFCSLPPSAPPPRFALDALHIRDVESQTAME 180
           GFSPFHQ M FPPYD         +SSSSQFC+   S PPP     A++++   S TA+E
Sbjct: 121 GFSPFHQQMFFPPYDDQHHHHHHSSSSSSQFCN---SLPPP----FAVNVKGDSSSTAVE 180

Query: 181 KTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYNSNGYN-YNSCDQPSCLSLSQF 240
           KTK WD MDL  Q KASS  KGKWI   G+SNQ +E+YN   YN YNS         SQF
Sbjct: 181 KTKIWD-MDLALQGKASSLTKGKWI--DGSSNQHVEDYNFTPYNSYNS---------SQF 240

Query: 241 GNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFMSS 300
           G NNNGVF PSQ+E A TSSSS+S+LFFTPYASYITNPFE+HIH L SNSHALSNPF+ S
Sbjct: 241 G-NNNGVF-PSQIE-APTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPS 300

Query: 301 PLQPFGSQNLKPF-PPDFNLKH--HGGSG-------KDGA 325
            L PF SQNLKPF    FN K   H   G       KDGA
Sbjct: 301 ALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGA 310

[Close]

BLAST of Sed0002240 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.0e-101
Identity = 233/331 (70.39%), Postives = 250/331 (75.53%), Query Frame = 0


Query: 1   MLKNSKEKGNFEAKEEGISSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGGKDRHS 60
           ML+NSKEKG FE+KEE     GKY FPKAP  ++SRQWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 1   MLRNSKEKG-FESKEE-----GKYRFPKAP--TSSRQWSGFRNPRIVRVSRSFGGKDRHS 60

Query: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPIPT 120
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPL IPT
Sbjct: 61  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPT 120

Query: 121 GFSPFHQHMLFPPYD-------SSSIASSSSQFCSLPPSAPPPRFALDALHIRDVESQTA 180
           GFSPFHQ MLFPPYD       SSS +SSSSQFC+   S PPP FA+D           +
Sbjct: 121 GFSPFHQQMLFPPYDHHHHYSSSSSSSSSSSQFCN---SLPPP-FAVDM-------KGDS 180

Query: 181 MEKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQIENYNSNGYN-YNSCDQPSCLSLS 240
           +EKTK WD MDL  Q KASS  KGKWI   G+SNQ +E+YN   YN YNS         S
Sbjct: 181 IEKTKIWD-MDLALQGKASSLTKGKWI--DGSSNQHVEDYNFTPYNTYNS---------S 240

Query: 241 QFGNNNNGVFNPSQVEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFM 300
           QFG NNNGVF PSQ+E A TSSSS+S+LFFTPYASYITNPFE+HIH L SNSHALSNPF+
Sbjct: 241 QFG-NNNGVF-PSQIE-APTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFV 297

Query: 301 SSPLQPFGSQNLKPF-PPDFNLKH--HGGSG 321
            S L PF SQNLKPF    FN K   H   G
Sbjct: 301 PSALHPFASQNLKPFSAASFNFKQLLHAADG 297

[Close]

BLAST of Sed0002240 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 8.2e-100
Identity = 245/407 (60.20%), Postives = 263/407 (64.62%), Query Frame = 0


Query: 4   NSKEKGNFEAKEEGI--------SSDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGG 63
           NSK++   EAKEEG+        ++DGKY+FPKAP TS+SRQWSGFRNPRIVRVSRSFGG
Sbjct: 5   NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAP-TSSSRQWSGFRNPRIVRVSRSFGG 64

Query: 64  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPP 123
           KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPP
Sbjct: 65  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP 124

Query: 124 LPIPTGFSPFHQHMLFPPY------------DSSSIASSSSQFCSLPPSAPPPRFALDAL 183
           L IP GFSPFHQ MLFP Y             SSS +SSSS+FC+   S PPP F LD  
Sbjct: 125 LQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCN---SLPPP-FMLDVK 184

Query: 184 HIRDVESQTAMEKTKNWDVMDLG-KQEKASSA------MKGKWIVDG----GNSNQQIEN 243
                ++   +EKTK WD MDL   Q+KA SA       KGKWI DG     NS QQ+E+
Sbjct: 185 STDAYQTTMTVEKTKLWD-MDLAVLQDKAGSATTAATTTKGKWI-DGSNNDSNSTQQVED 244

Query: 244 YNS-----------------------------NGYN----YNSCDQPSCLSLSQFGNNN- 303
           YN                              N YN    +N   QPSCLSLSQFGNNN 
Sbjct: 245 YNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNN 304

Query: 304 -NGVFNPSQVEAA---QTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALSNPFMSS 325
            NGVF    VE A     SSSSSSSLFFTPYASYITNPFE+HIH L SNSHALSNPFMSS
Sbjct: 305 SNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSS 364

[Close]

BLAST of Sed0002240 vs. ExPASy TrEMBL
Match: A0A1S3BX07 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.3e-99
Identity = 246/405 (60.74%), Postives = 265/405 (65.43%), Query Frame = 0


Query: 4   NSKEKGNFEAKEEGIS--------SDGKYNFPKAPSTSNSRQWSGFRNPRIVRVSRSFGG 63
           NSK++   EAKEEGIS        +DGKY+FPKAP TS+SRQWSGFRNPRIVRVSRSFGG
Sbjct: 14  NSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAP-TSSSRQWSGFRNPRIVRVSRSFGG 73

Query: 64  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPP 123
           KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPP
Sbjct: 74  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP 133

Query: 124 LPIPTGFSPFHQHMLFPP-------YDSSSIASSSSQFCSLPPSAPPPRFALDALHIRDV 183
           L IP GFSPFHQ MLFP        Y +SS +SSSS+FC+   S PPP F LD       
Sbjct: 134 LQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCN---SQPPP-FMLDVKSTDAY 193

Query: 184 ESQTAMEKTKNWDVMDL-------GKQEKASSAMKGKWIVDG----GNSNQQIENY---- 243
           ++   +EKTK WD MDL       G    A++  KGKWI DG     NS QQ+E+Y    
Sbjct: 194 QTTMTVEKTKLWD-MDLAVLPEKAGSATTAATTTKGKWI-DGSNNDSNSTQQVEDYNEQI 253

Query: 244 ----------------------NSNGY-NYNSC-------DQPSCLSLSQFGNNN--NGV 303
                                 NS  Y NYNS         QPSCLSLSQFGNNN  NG+
Sbjct: 254 SSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGI 313

Query: 304 FNPSQVEAAQ---TSSSSSSSLFFTPYASYITNPFENHIHLLGSNSHALS-NPFMSSPLQ 325
           F    VEAAQ   +SSSSSSSLFFTPYASYITNPFE+HIH L SNSHALS NPFMSS L 
Sbjct: 314 FPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLH 373

[Close]

BLAST of Sed0002240 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 169.9 bits (429), Expect = 3.5e-42
Identity = 115/279 (41.22%), Postives = 149/279 (53.41%), Query Frame = 0


Query: 31  STSNSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDK 90
           S S+SRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+
Sbjct: 38  SVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDR 97

Query: 91  LKLGQPSKVIDWLLDVTKLDIDKLPPLPIPTGFSPFHQHMLFPPYDSSSIASSSSQFCSL 150
           L L QPSKVIDWLL+  K D+DKLPPL  P GF+  + +++F           +S F   
Sbjct: 98  LGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF----------GNSGFGES 157

Query: 151 PPSAPPPRFALDALHIRDVESQTAMEKTKNWDVMDLGKQEKASSAMKGKWIVDGGNSNQQ 210
           P S     F    L   +        +T+         Q ++    KGKWI +  NSNQ 
Sbjct: 158 PSSTTSTTFPGTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDENSNQD 217

Query: 211 IENYNSN--------------------GYNYNSCDQPS---CLSLSQFGNNNNGVFNPSQ 270
            + +N+N                    G+   S DQ      +++S    NNN   N   
Sbjct: 218 HQGFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLN--- 277

Query: 271 VEAAQTSSSSSSSLFFTPYASYITNPFENHIHLLGSNSH 286
           +    +S+   S LFF P    +++ F  +   LG++ H
Sbjct: 278 LHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHH 303

[Close]

BLAST of Sed0002240 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 142.9 bits (359), Expect = 4.6e-34
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 3   KNSKEKGNFEAKEEGISSDGKYNFPKAPS--TSNSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           +  +E    + + E  ++ GK    K P+  +S+S  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPLPI P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSPFHQHMLF 132
             FS F+ H  F
Sbjct: 140 ENFSIFNHHQSF 151

[Close]

BLAST of Sed0002240 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 142.9 bits (359), Expect = 4.6e-34
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 3   KNSKEKGNFEAKEEGISSDGKYNFPKAPS--TSNSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           +  +E    + + E  ++ GK    K P+  +S+S  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLPI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPLPI P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSPFHQHMLF 132
             FS F+ H  F
Sbjct: 140 ENFSIFNHHQSF 151

[Close]

BLAST of Sed0002240 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 41  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 100
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 101 WLLDVTKLDIDKLPPLPIPTGFSPFHQHM 130
           WLL+V K D+D LPPL  P GF   + ++
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNL 107

[Close]

BLAST of Sed0002240 vs. TAIR 10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 93.2 bits (230), Expect = 4.1e-19
Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 45  RIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLD 104
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L   QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 105 VTKLDIDKLPPL---PIPTGFSPFHQHMLFPPYDSSSIASSSSQFCSLPPSAPPPRFALD 164
             +  I +LP L     PT     HQ+       ++S++ S+    S   S      +L 
Sbjct: 92  AAEDSISELPSLNNTHFPTD-DENHQNQTLTTVAANSLSKSACSSNS-DTSKNSSGLSLS 151

Query: 165 ALHIRDVESQTAMEKT 178
              +RD   + A E+T
Sbjct: 152 RSELRDKARERARERT 165

The following BLAST results are available for this feature:

BLAST of Sed0002240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135226.1	1.1e-109	71.68	transcription factor TCP5-like [Momordica charantia]	[more]
XP_022987421.1	2.8e-102	68.82	transcription factor TCP5-like [Cucurbita maxima]	[more]
KAG6589600.1	3.7e-102	72.05	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038879592.1	6.3e-102	65.69	transcription factor TCP5-like [Benincasa hispida]	[more]
XP_023516672.1	1.1e-101	69.50	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	4.9e-41	41.22	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	6.4e-33	56.82	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	1.7e-30	71.91	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q93V43	5.8e-18	42.65	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]
Q9C758	1.7e-17	33.56	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]

BLAST of Sed0002240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C023	5.2e-110	71.68	transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE...	[more]
A0A6J1JE53	1.4e-102	68.82	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]
A0A6J1E797	2.0e-101	70.39	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0LRU6	8.2e-100	60.20	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A1S3BX07	5.3e-99	60.74	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]

BLAST of Sed0002240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	3.5e-42	41.22	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	4.6e-34	56.82	plastid transcription factor 1	[more]
AT3G02150.2	4.6e-34	56.82	plastid transcription factor 1	[more]
AT5G08070.1	1.2e-31	71.91	TCP domain protein 17	[more]
AT4G18390.1	4.1e-19	42.65	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 55..173 e-value: 1.2E-23 score: 84.4
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 55..113 score: 26.691658
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 3..315
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 3..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002240.1	Sed0002240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity