Sed0001871 (gene) Chayote v1

Overview


Name	Sed0001871
Type	gene
Organism	Sechium edule (Chayote v1)
Description	[RNA-polymerase]-subunit kinase
Location	LG12: 31713756 .. 31719371 (-)
RNA-Seq Expression	Sed0001871
Synteny	Sed0001871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCGATGATTCTATCTTCTATCAGGTTGAATAAAAAACTTAATGATTTGGCCACTCCTTTATGATTTTTGTGTTAACGACATGATAAAGTTTAAGTGTCAAAATTATTTTCCTACAAATTTTCTTGAAAAATTGAACAATATTGGGTCAAATGATTGTCATACAAGAATAGTGGATGCGCACATAAATTGGATAGAATACACACATTTATTATTTGATAGAATACACACATTTATTATTTGATATTCAAATATCGTAAGGTCAAAGAATATATTTACAAAAATAGTCAATATTAGCATAAACAAGCTCAAATGCTCACGACCACTAAAACTATTTATTAGTGTTAGCACCAATTATAATAATAGTTCATTGACATTAGTGTGTGCTCATCGATTAAAGATGCTCGGTTTTTGTCTTGTCTCTCACCCAAAACTAAAAAATAATAATATAAAATCTACAATAAGTAGAATTCAAAAACGGTGTTGCCATTGGCTGCTTTTCCACGCTCTCTTCTCTCTATCTTCAACGGCTTTCTTTATGCTACGAACTGAACTGCACTTCTCGCCATCGCCGAAACCCTAATTTCGCCGGAATTCCTTGCAGAAATGTTGCCGTAGACTCGACAATTCCTTTATTCCGATCGAATGTGTCGGGCATGAGAAGGATACCGGCCGCAACAAGATATTCTGAAGCAGAATTTTGGAGGCTGCAATGGCTGAGCCCGATCCATCGAAGAAAGTTGCCGATCGATATTTAAAGCGTGAGATTCTCGGAGAAGGTACCTATGGTGTTGTTTATAAGGCCATTGATACTCAGGTAGATCTTTGCCCACCAATTTTTTATACGATTCTGCATCTGGGTTACTTTGTATGAAAATTTAATGGCGCTTTGATTTGTTTGAAAGAAAACATGCGAATAGGGAGAAAAGGGTAATTCGGAAAGTTGTAGCTAAGGTCCGGTTTGATTACCATTTGATTTTGTTTTTCGTTTTTGAAATTTAAGCTTATTTGGACTCGAATTCTCTTTGTAAGTTTACATTCCCTTGAAGAAGTGTGTGTCTTAACCAAATTTCAAAAACCAAACCAACTTTTAGTTTAAAAAAAAAAAAAAAAAATAGGTAAGATGTAGATATCAAAATAAGAAAAATCATATGAAAAAGTAGTTGTTATAGATTTAAATTTCAAAAACAAGAAACGAAAAACAAAATAATTATCAAATAAGCCTAAATTTTCTGTCATTGATTTGTCGACGTTTTGAGTTTGGTCACTTTGGTTGTGTTTCAATGGACATCTTCAGTTCTTTTTTCCCTAGGTTGTGCTCTAAAACGTAAAGACAATTTTGTTCACCTGAAATGCATTTCACGTTAGCTGAATAGATGTCGAGACTAAAGAGCAGTTCTTAGGTTTACTTGCCTTAAATTCTGATTGTTAGATGCTTGAAAATCAAGGCTTAAACTTGTGTTCGTTCTATTACATCATCAAAATAGGGGTTTCAACTTGATTTACCGACTTTTTTTTTCAACTTTTAGACAGGTCAGATTGTTGCAATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGGGTAAATTTTACGGCTCTTCGAGAAATCAAGCTTCTAAAAGAGCTCAAAGATTCAAATATAATTGAGTTAATTGATGCATTCCCTCATAAAGAAAATTTGCATCTTGTTTTTGAATTTATGGAGACGGACCTCGAAGCTGTTATACGCGATCGGAACATATTTCTTTCCCCAGCTGACATAAAATCGTACCTTCAAATGACGTTGAAAGGCCTTGCCTATTGCCACAAGAAATGGGTTTTACATAGGTACCATAATTTTGTATAATAGTTATTTTTAATGCGTAGTTCAAATTATTTAGCAGCTGCATACCTGTGCTTTACGCTATTTATATAAGATGCTTGCTCGTACATTACAGGGATATGAAGCCAAATAATTTGTTGATAGGACCTAATGGTCAACTAAAACTTGCAGATTTTGGTTTGGCTCGTCTATTTGGGAGTCCAGATCGCAGGTTTACTCACCAGGTACTTTCTCTTCTCCCTCTTTTGCATTATTGATCAGGTAAGAGTTTATTGCCCTGAAATCCCTCGACTCTAATTTGGTATTGATCGTAGCTGTAGCCTTTTAAGCTTGGCATATTAAATGACTTGTACAAGCCAAGAACCCATCTTCATGTTATTGTTGCCAGTTATTTCAACAGTATACCTGAATTTCCATTCATCTCAATCTTAACATGTCTGTAATATTTCAAAATAGGTGTTTGCCCGATGGTACAGAGCACCAGAGCTATTGTTTGGCACCAAGCAATATGGTTCTGCAGTGGATGTTTGGGCAGCAGCTTGTATTTTTGCTGAACTACTACTTCGTAGACCTTTTCTTCAGGTTCTTCCATATTTGTAACTATAAATGATTCTTTTACATGATGATGGCAGATGTTTAACCAATGAGAATTGTATTTATTCGTTCTCCCCTTCATCTGCTTGTGATATTTAGACTTCACTATGTGTGTAAATTACTTTAATATAAACTTAGTCTCATGCAAAAAATTGATAACCAAGAGCTGCTCATCTCTCTCTAAAAAAACCCTCACTCCAAAAGCTTCTGCTTAATTTTACATGAACCATGCAATCAGATCCACCTTCTGCTCACCCTCATGATCCTCCAATGATTTTCCCATGTCGTGTAGTCCCCTGTCGCCTTTTCTTCTAGTTCCTCTTCCGACTTCTTGAGTAGTCGAGTTTTCGAGGATGCCAATGTGGCATCATGCTGTCGAATAAAAAATGGTGTTTTCTCCATGGAAGGCCTTCACCGGCGTTCCTCTCCTTGTTGTTAGGCATTTTCTACTGGCGACATCGAGTGGTTTTCTTCACAGGCACTAAAATGGGATCTTTCCTCATTCTCGGCCATAGCATCACACAGTTTATCCATCTTCTTCACCGGCCATCTAATAGAAATTAGAGGAAAATGACTTTCATAATTATCTGGGACACGTATGCTTCATCATAACTCACCTTGTATTTCTTCTTCTATATTAAGAGCTTTCTCTATTTTTTTATTGGTGTATATGCTTGTTTTTATCGGAATTTTTCCTATATATTTGCCCTCTAATTGTCCATTGTACCCTGTAAGGAGGGAATGTTTAGCTCACAAATTTAATAACCCTTAAAATATGTTAAGCTTTATAGTTGAGAAGCCTAGGTTTATATAATAATCAGTATATTGGTTCTGTGAAAAAGGGTGGTAGAAACTTGAGTTTGAAGACCCTAATTGTCAGTGGTCTTCCTTGTTACTCTTAGAAAAATAAATAAAACTTGAGTTTTTGTCTATGCCGCTGTTAGTATGTGGTATAAACGTAAGTTTCTTAGCGTGTAAGTTTAACAAGCCCGTATGTTCTTACCTTCAGTTTACCTCCAGATGTTATTCATTTGCCAATGTTTTGATAACTATACTCTTCCGAGAATCTTAGTGCTTAGTCAGTCACTGGCAATTTTGTTCCATTATATTTTAAACCTGCATTAGCACTCGGAGTTTTTGTATCACTTTGTAAAATAGATTGAATTTTTAGATTCGGGTTCTTGTATTTGTTTCTCTTGTTTCTTAAATCATTTTTATTGTTGACAGGGTTCAAGTGACATTGATCAATTAGGGAAGATCTTTGCAGCTTTTGGAACTCCTACGTCTTCTCAGTGGTCTGATATGTTATACCTTCCTGATTACGTGGAGTTCCAATATGTTCCTGCACCTCCTCTACGATCACTGTTTCCTATGGCTAGTGATGACACACTGGATCTCTTATCGAAGATGTTTGCTTATGATCCAAAATCTAGAATTTCCATTCAGCAAGCATTGGAGCATAGGTTTCTCATTTCTGAAATATAAGAATATAATTTAGAAACCTATGATTGTTTTGGATACATTGCTTACAGTATTTCCATTTTAGGTACTTCACATCTGCACCATTTCCCACTGATCCTTGTAAGCTTCCAAGGCCTGCTGCTAAGCGCGAACCTATGAACTCTAGAGTTATTGATTTAAATTCAAATGAGGGTCCTACTGTCCTCTCACCTCCAAGAAAGTCCAGAAGAGTAATGCCTGACCGTGAGGCTTTTGAAGAAAATGCACAACGAGCTGATAAGCTTGATAACCATGTTAATGAGGTTCAAGACCTAGTTGCTGGAAATACAAGCAGAAATGAAGCAGTGCCCATGTCGTTGGATTTTTCTATATTTGGTGGAAAACCTCCAAACAGACCAACAATTAACAGGTAAAATTTTCTTATTCTGACACAATAGTTTCATTTCAGAAATTGCGAAACCGATTGTCTGCCTTAGCTAGGAAATGCGTATGGGTATGTAGGAGGTTGTTGGATGTAAACTTGTACTCTAGCAACATATCATGGAGAGTGTTGGTTGATAATGTTAAATTCATCCCAACCCTTCAACTTAAGCTTTTGAGTTAATTAGTGATTTAACATAATTTAATATGTTATAAGAGCATGAGGTCCTAAATTGAATTCCACTTCTGTCCCCAAGAGGTGACGCAGTGGTTGAGAACTTGGACTTTGAAGGTGTACTCCCCTCAAAGTCCCAGGTTTGAGACTCACTTGTGACATTAATTTGTAGACATCTCCCGTGTCTCCATTCCTTTGATGTCTCTCGATGCTTGACCTAGAGACGAGTGTGGTTACCCTTGTTTCAAAAAAATAAATTGAATTCTACTTGTGACATTTTTCAAAATTTCAAACTACAAGCAGCGTTGGTTGATATGAAATTGTTTCTTGTCCAAAAAAATTAAATTTACCCCAACACATCAAGTTAAGCTTTTGGGTTGATTAGTGATTTAATATAATTCAACAGATAGTAATCTTACAAGTTCCCATTATCAGAAATATGAACTTGATGTTGTAAGATAGTCTAACCAAGTTACCATTCCAGACCCATGAACAATACCGTTTCTTTTTAGTAAGAAATCAAATATTTCACATAACATTTAAGTAGGACAGTGTACTGCAGTGCTGAACATTTTTGTTTTTCCTCCTGATGCAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAGCAATAAGGAGATTCTGTATCAGTGTACTGCAATACAAATTCGATCTTTCAACTGAATGCTAACCTAGCCTGCATTTATGAGGTAACAACGTCTCAAGAATTTGTTCGAACTACATTATCTTATTTTCCTGTCCTGTAATCTCTCTCTCTCTCTGGATAAAGATCTCTCATCCTGTAACATCTATGTTAAGTTTTACCCCCCTCTTTCCTCTTCTCTTCCCAGCTAGTTAGTTTTTTTAAATGTCCAGTTTTTCTCAATTGAGTGCTGGAGAGTTGGATCAAGAAGTTCGGATCTTTAAGCGAAATTGTAACTCTGTTAATAAATACATTTTAAAAAATATTTAGAACAGTTTGATTCAATCGTTATTAGGTAGATACCTGCCTATGAATTAATTTTCTCCGAGTTCTCTTGACTATCAAATATTATAGGGTCAGACGGGTTGTCTTGTAAGAATGGTCGAGATCTGTGTAAACTGCTGATATAAAATAAAGTTTCTGGTG

mRNA sequence

AAAAATCGATGATTCTATCTTCTATCAGGTTGAATAAAAAACTTAATGATTTGGCCACTCCTTTATGATTTTTGTGTTAACGACATGATAAAGTTTAAGTGTCAAAATTATTTTCCTACAAATTTTCTTGAAAAATTGAACAATATTGGGTCAAATGATTGTCATACAAGAATAGTGGATGCGCACATAAATTGGATAGAATACACACATTTATTATTTGATAGAATACACACATTTATTATTTGATATTCAAATATCGTAAGGTCAAAGAATATATTTACAAAAATAGTCAATATTAGCATAAACAAGCTCAAATGCTCACGACCACTAAAACTATTTATTAGTGTTAGCACCAATTATAATAATAGTTCATTGACATTAGTGTGTGCTCATCGATTAAAGATGCTCGGTTTTTGTCTTGTCTCTCACCCAAAACTAAAAAATAATAATATAAAATCTACAATAAGTAGAATTCAAAAACGGTGTTGCCATTGGCTGCTTTTCCACGCTCTCTTCTCTCTATCTTCAACGGCTTTCTTTATGCTACGAACTGAACTGCACTTCTCGCCATCGCCGAAACCCTAATTTCGCCGGAATTCCTTGCAGAAATGTTGCCGTAGACTCGACAATTCCTTTATTCCGATCGAATGTGTCGGGCATGAGAAGGATACCGGCCGCAACAAGATATTCTGAAGCAGAATTTTGGAGGCTGCAATGGCTGAGCCCGATCCATCGAAGAAAGTTGCCGATCGATATTTAAAGCGTGAGATTCTCGGAGAAGGTACCTATGGTGTTGTTTATAAGGCCATTGATACTCAGACAGGTCAGATTGTTGCAATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGGGTAAATTTTACGGCTCTTCGAGAAATCAAGCTTCTAAAAGAGCTCAAAGATTCAAATATAATTGAGTTAATTGATGCATTCCCTCATAAAGAAAATTTGCATCTTGTTTTTGAATTTATGGAGACGGACCTCGAAGCTGTTATACGCGATCGGAACATATTTCTTTCCCCAGCTGACATAAAATCGTACCTTCAAATGACGTTGAAAGGCCTTGCCTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGACCTAATGGTCAACTAAAACTTGCAGATTTTGGTTTGGCTCGTCTATTTGGGAGTCCAGATCGCAGGTTTACTCACCAGGTGTTTGCCCGATGGTACAGAGCACCAGAGCTATTGTTTGGCACCAAGCAATATGGTTCTGCAGTGGATGTTTGGGCAGCAGCTTGTATTTTTGCTGAACTACTACTTCGTAGACCTTTTCTTCAGGGTTCAAGTGACATTGATCAATTAGGGAAGATCTTTGCAGCTTTTGGAACTCCTACGTCTTCTCAGTGGTCTGATATGTTATACCTTCCTGATTACGTGGAGTTCCAATATGTTCCTGCACCTCCTCTACGATCACTGTTTCCTATGGCTAGTGATGACACACTGGATCTCTTATCGAAGATGTTTGCTTATGATCCAAAATCTAGAATTTCCATTCAGCAAGCATTGGAGCATAGGTACTTCACATCTGCACCATTTCCCACTGATCCTTGTAAGCTTCCAAGGCCTGCTGCTAAGCGCGAACCTATGAACTCTAGAGTTATTGATTTAAATTCAAATGAGGGTCCTACTGTCCTCTCACCTCCAAGAAAGTCCAGAAGAGTAATGCCTGACCGTGAGGCTTTTGAAGAAAATGCACAACGAGCTGATAAGCTTGATAACCATGTTAATGAGGTTCAAGACCTAGTTGCTGGAAATACAAGCAGAAATGAAGCAGTGCCCATGTCGTTGGATTTTTCTATATTTGGTGGAAAACCTCCAAACAGACCAACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAGCAATAAGGAGATTCTGTATCAGTGTACTGCAATACAAATTCGATCTTTCAACTGAATGCTAACCTAGCCTGCATTTATGAGGTAACAACGTCTCAAGAATTTGTTCGAACTACATTATCTTATTTTCCTGTCCTGTAATCTCTCTCTCTCTCTGGATAAAGATCTCTCATCCTGTAACATCTATGTTAAGTTTTACCCCCCTCTTTCCTCTTCTCTTCCCAGCTAGTTAGTTTTTTTAAATGTCCAGTTTTTCTCAATTGAGTGCTGGAGAGTTGGATCAAGAAGTTCGGATCTTTAAGCGAAATTGTAACTCTGTTAATAAATACATTTTAAAAAATATTTAGAACAGTTTGATTCAATCGTTATTAGGTAGATACCTGCCTATGAATTAATTTTCTCCGAGTTCTCTTGACTATCAAATATTATAGGGTCAGACGGGTTGTCTTGTAAGAATGGTCGAGATCTGTGTAAACTGCTGATATAAAATAAAGTTTCTGGTG

Coding sequence (CDS)

ATGGCTGAGCCCGATCCATCGAAGAAAGTTGCCGATCGATATTTAAAGCGTGAGATTCTCGGAGAAGGTACCTATGGTGTTGTTTATAAGGCCATTGATACTCAGACAGGTCAGATTGTTGCAATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGGGTAAATTTTACGGCTCTTCGAGAAATCAAGCTTCTAAAAGAGCTCAAAGATTCAAATATAATTGAGTTAATTGATGCATTCCCTCATAAAGAAAATTTGCATCTTGTTTTTGAATTTATGGAGACGGACCTCGAAGCTGTTATACGCGATCGGAACATATTTCTTTCCCCAGCTGACATAAAATCGTACCTTCAAATGACGTTGAAAGGCCTTGCCTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGACCTAATGGTCAACTAAAACTTGCAGATTTTGGTTTGGCTCGTCTATTTGGGAGTCCAGATCGCAGGTTTACTCACCAGGTGTTTGCCCGATGGTACAGAGCACCAGAGCTATTGTTTGGCACCAAGCAATATGGTTCTGCAGTGGATGTTTGGGCAGCAGCTTGTATTTTTGCTGAACTACTACTTCGTAGACCTTTTCTTCAGGGTTCAAGTGACATTGATCAATTAGGGAAGATCTTTGCAGCTTTTGGAACTCCTACGTCTTCTCAGTGGTCTGATATGTTATACCTTCCTGATTACGTGGAGTTCCAATATGTTCCTGCACCTCCTCTACGATCACTGTTTCCTATGGCTAGTGATGACACACTGGATCTCTTATCGAAGATGTTTGCTTATGATCCAAAATCTAGAATTTCCATTCAGCAAGCATTGGAGCATAGGTACTTCACATCTGCACCATTTCCCACTGATCCTTGTAAGCTTCCAAGGCCTGCTGCTAAGCGCGAACCTATGAACTCTAGAGTTATTGATTTAAATTCAAATGAGGGTCCTACTGTCCTCTCACCTCCAAGAAAGTCCAGAAGAGTAATGCCTGACCGTGAGGCTTTTGAAGAAAATGCACAACGAGCTGATAAGCTTGATAACCATGTTAATGAGGTTCAAGACCTAGTTGCTGGAAATACAAGCAGAAATGAAGCAGTGCCCATGTCGTTGGATTTTTCTATATTTGGTGGAAAACCTCCAAACAGACCAACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAGCAATAA

Protein sequence

MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ

Homology

[Close]

BLAST of Sed0001871 vs. NCBI nr
Match: XP_023531764.1 (cyclin-dependent kinase D-3 [Cucurbita pepo subsp. pepo] >KAG6587670.1 Cyclin-dependent kinase D-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 795.0 bits (2052), Expect = 3.0e-226
Identity = 391/416 (93.99%), Postives = 404/416 (97.12%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MAE DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSPDRR+THQVFARWYRAP
Sbjct: 121 LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRYTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFG+KQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT+SQWSDML
Sbjct: 181 ELLFGSKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTTSQWSDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREPMN RV DLNSNEGPTVLSPPRKSRRVMP+REAFE NA +ADKLD+
Sbjct: 301 TDPSKLPRPTSKREPMNPRVSDLNSNEGPTVLSPPRKSRRVMPEREAFEGNACKADKLDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           H NEV++  AGNTS+NEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HGNEVREAAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. NCBI nr
Match: XP_023005117.1 (cyclin-dependent kinase D-3 [Cucurbita maxima])

HSP 1 Score: 794.7 bits (2051), Expect = 3.9e-226
Identity = 391/416 (93.99%), Postives = 403/416 (96.88%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MAE DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSPDRR+THQVFARWYRAP
Sbjct: 121 LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRYTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFG+KQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT+SQWSDML
Sbjct: 181 ELLFGSKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTTSQWSDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREPMN RV DLNSNEGPTVLSPPRKSRRVMP+REAFE N  RADKLD+
Sbjct: 301 TDPSKLPRPTSKREPMNPRVSDLNSNEGPTVLSPPRKSRRVMPEREAFEGNVCRADKLDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           H NEV++  AGNTS+NEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HGNEVREAAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. NCBI nr
Match: XP_038880307.1 (cyclin-dependent kinase D-3 [Benincasa hispida])

HSP 1 Score: 793.5 bits (2048), Expect = 8.8e-226
Identity = 390/416 (93.75%), Postives = 403/416 (96.88%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MAE DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHK NLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLAYCHKKWVLHRDMKPNNLLIG NGQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT SQW DML
Sbjct: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRI+IQQALEHRYF+SAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFSSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREP NSRV+DLNSNEGPTVLSPPRKSRRVMP+REAFE NA RAD+LD+
Sbjct: 301 TDPSKLPRPTSKREPTNSRVLDLNSNEGPTVLSPPRKSRRVMPEREAFEGNAYRADRLDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           HVNEV+++ AGNTS+NEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HVNEVREVAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. NCBI nr
Match: XP_022929107.1 (cyclin-dependent kinase D-3 [Cucurbita moschata])

HSP 1 Score: 792.7 bits (2046), Expect = 1.5e-225
Identity = 390/416 (93.75%), Postives = 403/416 (96.88%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MAE DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSPDRR+THQVFARWYRAP
Sbjct: 121 LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRYTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFG+KQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT+SQWSDML
Sbjct: 181 ELLFGSKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTTSQWSDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPK RISIQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKFRISIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREPMN RV DLNSNEGPTVLSPPRKSRRVMP+REAFE NA +ADKLD+
Sbjct: 301 TDPSKLPRPTSKREPMNPRVSDLNSNEGPTVLSPPRKSRRVMPEREAFEGNACKADKLDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           H NEV++  AGNTS+NEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HGNEVREAAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. NCBI nr
Match: XP_008453457.1 (PREDICTED: cyclin-dependent kinase D-3-like [Cucumis melo])

HSP 1 Score: 790.0 bits (2039), Expect = 9.7e-225
Identity = 390/418 (93.30%), Postives = 403/418 (96.41%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MA+ DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MADLDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHK NLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLAYCHKKWVLHRDMKPNNLLIG NGQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT SQW DML
Sbjct: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRI+IQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREP--MNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKL 360
           TDP KLPRP +KREP   NSRV+DLNSN+GPTVLSPPRKSRRVMPDREAFE NA RAD+L
Sbjct: 301 TDPSKLPRPTSKREPTNTNSRVLDLNSNDGPTVLSPPRKSRRVMPDREAFEGNAYRADRL 360

Query: 361 DNHVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           D+HVNEV++L AGNTS+NEAVPMSLDFS+FGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 DDHVNEVRELAAGNTSKNEAVPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ 418

[Close]

BLAST of Sed0001871 vs. ExPASy Swiss-Prot
Match: P29620 (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 4.6e-177
Identity = 308/407 (75.68%), Postives = 349/407 (85.75%), Query Frame = 0


Query: 8   KKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K+VADRYLKRE+LGEGTYGVV+KA+DT+TG  VAIKKIRLGK KEGVNFTALREIKLLKE
Sbjct: 13  KRVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKE 72

Query: 68  LKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYC 127
           LKDSNIIELIDAFP+K NLHLVFEFMETDLEAVIRDRNI LSPAD KSY+QM LKGLA+C
Sbjct: 73  LKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFC 132

Query: 128 HKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTK 187
           HKKWVLHRDMKPNNLLIG +GQLKLADFGLAR+FGSP+R FTHQVFARWYRAPELLFGTK
Sbjct: 133 HKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTK 192

Query: 188 QYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVE 247
           QYGSAVD+WAA CIFAELLLRRPFLQGSSDIDQLGKIFAAFGTP SSQW DM+YLPDYVE
Sbjct: 193 QYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVE 252

Query: 248 FQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLP 307
           +Q+V APPLRSLFPMASDD LDLLS+MF YDPK+RI+ QQALEHRYF S P PT P +LP
Sbjct: 253 YQFVSAPPLRSLFPMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPTKPSQLP 312

Query: 308 RPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVNEVQD 367
           RP  K +  N+++ DLN  +GP VLSPPRK RRV    E  E +  RAD+ + H +  + 
Sbjct: 313 RPPPKGDSGNNKIPDLNLQDGPVVLSPPRKLRRVTA-HEGMEVHMHRADRTEEHPSGARH 372

Query: 368 LVAGNTSRNEAVPMSLDF-SIFGGKPPNRPTINSADRSHLKRKLDLE 414
           +    +S++  +PMS+D  +IFG +P  RPT+NSAD+S LKRKLD++
Sbjct: 373 M-DDMSSQSSRIPMSVDVGAIFGTRPAPRPTLNSADKSRLKRKLDMD 417

[Close]

BLAST of Sed0001871 vs. ExPASy Swiss-Prot
Match: A2Y4B6 (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.3e-176
Identity = 308/407 (75.68%), Postives = 348/407 (85.50%), Query Frame = 0


Query: 8   KKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K+VADRYLKRE+LGEGTYGVV+KA DT+TG  VAIKKIRLGK KEGVNFTALREIKLLKE
Sbjct: 13  KRVADRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKE 72

Query: 68  LKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYC 127
           LKDSNIIELIDAFP+K NLHLVFEFMETDLEAVIRDRNI LSPAD KSY+QM LKGLA+C
Sbjct: 73  LKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFC 132

Query: 128 HKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTK 187
           HKKWVLHRDMKPNNLLIG +GQLKLADFGLAR+FGSP+R FTHQVFARWYRAPELLFGTK
Sbjct: 133 HKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTK 192

Query: 188 QYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVE 247
           QYGSAVD+WAA CIFAELLLRRPFLQGSSDIDQLGKIFAAFGTP SSQW DM+YLPDYVE
Sbjct: 193 QYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVE 252

Query: 248 FQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLP 307
           +Q+V APPLRSLFPMASDD LDLLS+MF YDPK+RI+ QQALEHRYF S P PT P +LP
Sbjct: 253 YQFVSAPPLRSLFPMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPTKPSQLP 312

Query: 308 RPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVNEVQD 367
           RP  K +  N+++ DLN  +GP VLSPPRK RRV    E  E +  RAD+ + H +  + 
Sbjct: 313 RPPPKGDSGNNKIPDLNLQDGPVVLSPPRKLRRVTA-HEGMEVHMHRADRTEEHPSGARH 372

Query: 368 LVAGNTSRNEAVPMSLDF-SIFGGKPPNRPTINSADRSHLKRKLDLE 414
           +    +S++  +PMS+D  +IFG +P  RPT+NSAD+S LKRKLD++
Sbjct: 373 M-DDMSSQSSRIPMSVDVGAIFGTRPAPRPTLNSADKSRLKRKLDMD 417

[Close]

BLAST of Sed0001871 vs. ExPASy Swiss-Prot
Match: Q9LMT0 (Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana OX=3702 GN=CDKD-3 PE=1 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 5.3e-173
Identity = 306/412 (74.27%), Postives = 340/412 (82.52%), Query Frame = 0


Query: 4   PDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIK 63
           P+  KKVADRYLK+E+LG+GTYGVV+KA DT+T Q VAIKKIRLGKQ+EGVN TALREIK
Sbjct: 2   PEQPKKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIK 61

Query: 64  LLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKG 123
           +LKELK  +II LIDAFPHKENLHLVFEFMETDLEAVIRD NIFLSPADIKSYL MT KG
Sbjct: 62  MLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMTFKG 121

Query: 124 LAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELL 183
           LAYCH KWVLHRDMKPNNLLIG +GQLKLADFGLAR+FGSP+R+FTHQVFARWYRAPELL
Sbjct: 122 LAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELL 181

Query: 184 FGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLP 243
           FG KQYG+AVDVWA ACIFAELLLRRPFLQG+SDIDQL KIFAAFGTP + QW D+  LP
Sbjct: 182 FGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLP 241

Query: 244 DYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDP 303
           DYVE+Q+VPAP LRSLFP  SDD LDLLSKMF YDPK+RISI+QALEHRYFTSAP PTDP
Sbjct: 242 DYVEYQFVPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAPTDP 301

Query: 304 CKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVN 363
            KLP+P  K++  +S       +E  TV SPPRK RRVMP+R        R D L +HV+
Sbjct: 302 AKLPKPVPKQDGKSS----YGKHEAITVQSPPRKLRRVMPER-------GRVDSLKSHVD 361

Query: 364 EVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQ 416
                      +++  PMSLDF+I   +PPNRPTI SADRSHLKRKLDLEFQ
Sbjct: 362 -----------KDQQAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEFQ 391

[Close]

BLAST of Sed0001871 vs. ExPASy Swiss-Prot
Match: Q9C9U2 (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana OX=3702 GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 2.4e-170
Identity = 302/407 (74.20%), Postives = 331/407 (81.33%), Query Frame = 0


Query: 8   KKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           KKVADRYLKRE+LG+GTYGVV+KA DT+ G+ VAIKKIRLGK+KEGVN TALREIKLLKE
Sbjct: 5   KKVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKE 64

Query: 68  LKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYC 127
           LK  +IIELIDAFPHKENLH+VFEFMETDLEAVIRDRN++LSP D+KSYLQM LKGL YC
Sbjct: 65  LKHPHIIELIDAFPHKENLHIVFEFMETDLEAVIRDRNLYLSPGDVKSYLQMILKGLEYC 124

Query: 128 HKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTK 187
           H KWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSP R+FTHQVFARWYRAPELLFG K
Sbjct: 125 HGKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAPELLFGAK 184

Query: 188 QYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVE 247
           QY  AVDVWAA CIFAELLLRRPFLQG+SDIDQL KIFAAFGTP + QW DM+ LPDYVE
Sbjct: 185 QYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICLPDYVE 244

Query: 248 FQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLP 307
           +Q+VPAP LRSL P  S+D LDLLSKMF YDPKSRISIQQAL+HRYFTSAP PTDP KLP
Sbjct: 245 YQFVPAPSLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLP 304

Query: 308 RPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVNEVQD 367
           RP +K++  +S     +  E   VLSP  K RRVMPDR           K  N   +   
Sbjct: 305 RPVSKQDAKSSD----SKLEAIKVLSPAHKFRRVMPDR----------GKSGNGFKDQSV 364

Query: 368 LVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEF 415
            V    S +   PMSLDF+I   +PPNRPTI SADRSHLKRKLDLEF
Sbjct: 365 DVMRQASHDGQAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEF 397

[Close]

BLAST of Sed0001871 vs. ExPASy Swiss-Prot
Match: Q9C9M7 (Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana OX=3702 GN=CDKD-2 PE=1 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 9.7e-151
Identity = 256/332 (77.11%), Postives = 290/332 (87.35%), Query Frame = 0


Query: 12  DRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKELKDS 71
           DRYL+R+ILGEGTYGVVYKA DT+TG+ VA+KKIRLG QKEGVNFTALREIKLLKEL   
Sbjct: 11  DRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKELNHP 70

Query: 72  NIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKW 131
           +I+ELIDAFPH  +LHLVFE+M+TDLEAVIRDRNIFLSP DIKSY+ MTLKGLAYCHKKW
Sbjct: 71  HIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKKW 130

Query: 132 VLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTKQYGS 191
           VLHRDMKPNNLLIG NG LKLADFGLARLFGSP+RRFTHQVFA WYRAPELLFG++QYG+
Sbjct: 131 VLHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPELLFGSRQYGA 190

Query: 192 AVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVEFQYV 251
            VDVWAA CIFAELLLRRPFL GS++IDQLGKIF AFGTP  SQWSDM+YLPDY+EF Y 
Sbjct: 191 GVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIYLPDYMEFSYT 250

Query: 252 PAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLPRPAA 311
           PAPPLR++FPMASDD LDLL+KMF YDP+ RI+IQQAL+HRYF+S+P PT+P KL  PA+
Sbjct: 251 PAPPLRTIFPMASDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSPTEPGKLQIPAS 310

Query: 312 KREPMNSRVIDLNSN-EGPTVLSPPRKSRRVM 343
           K + +  +  + N +   P VLSPP K RRVM
Sbjct: 311 KGDALEPKASEQNQHGNSPAVLSPPGKMRRVM 342

[Close]

BLAST of Sed0001871 vs. ExPASy TrEMBL
Match: A0A6J1KSA7 ([RNA-polymerase]-subunit kinase OS=Cucurbita maxima OX=3661 GN=LOC111498202 PE=3 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 1.9e-226
Identity = 391/416 (93.99%), Postives = 403/416 (96.88%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MAE DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSPDRR+THQVFARWYRAP
Sbjct: 121 LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRYTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFG+KQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT+SQWSDML
Sbjct: 181 ELLFGSKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTTSQWSDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREPMN RV DLNSNEGPTVLSPPRKSRRVMP+REAFE N  RADKLD+
Sbjct: 301 TDPSKLPRPTSKREPMNPRVSDLNSNEGPTVLSPPRKSRRVMPEREAFEGNVCRADKLDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           H NEV++  AGNTS+NEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HGNEVREAAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. ExPASy TrEMBL
Match: A0A6J1ELU3 ([RNA-polymerase]-subunit kinase OS=Cucurbita moschata OX=3662 GN=LOC111435785 PE=3 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 7.3e-226
Identity = 390/416 (93.75%), Postives = 403/416 (96.88%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MAE DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSPDRR+THQVFARWYRAP
Sbjct: 121 LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRYTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFG+KQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT+SQWSDML
Sbjct: 181 ELLFGSKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTTSQWSDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPK RISIQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKFRISIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREPMN RV DLNSNEGPTVLSPPRKSRRVMP+REAFE NA +ADKLD+
Sbjct: 301 TDPSKLPRPTSKREPMNPRVSDLNSNEGPTVLSPPRKSRRVMPEREAFEGNACKADKLDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           H NEV++  AGNTS+NEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HGNEVREAAAGNTSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. ExPASy TrEMBL
Match: A0A1S3BWA5 ([RNA-polymerase]-subunit kinase OS=Cucumis melo OX=3656 GN=LOC103494161 PE=3 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 4.7e-225
Identity = 390/418 (93.30%), Postives = 403/418 (96.41%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MA+ DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MADLDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHK NLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLAYCHKKWVLHRDMKPNNLLIG NGQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT SQW DML
Sbjct: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRI+IQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREP--MNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKL 360
           TDP KLPRP +KREP   NSRV+DLNSN+GPTVLSPPRKSRRVMPDREAFE NA RAD+L
Sbjct: 301 TDPSKLPRPTSKREPTNTNSRVLDLNSNDGPTVLSPPRKSRRVMPDREAFEGNAYRADRL 360

Query: 361 DNHVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           D+HVNEV++L AGNTS+NEAVPMSLDFS+FGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 DDHVNEVRELAAGNTSKNEAVPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ 418

[Close]

BLAST of Sed0001871 vs. ExPASy TrEMBL
Match: A0A0A0LPN4 ([RNA-polymerase]-subunit kinase OS=Cucumis sativus OX=3659 GN=Csa_1G024870 PE=3 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 1.4e-224
Identity = 389/418 (93.06%), Postives = 402/418 (96.17%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           MA+ DPSKKVADRYLKRE+LGEGTYGVVYKAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MADLDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKDSNIIELIDAFPHK NLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLAYCHKKWVLHRDMKPNNLLIG NGQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT SQW DML
Sbjct: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRI+IQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREP--MNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKL 360
           TDP KLPRP +KREP   NSRV+DLNSN+GPTVLSPPRKSRRVMPDREAFE NA RAD+L
Sbjct: 301 TDPSKLPRPTSKREPTNSNSRVLDLNSNDGPTVLSPPRKSRRVMPDREAFEGNAYRADRL 360

Query: 361 DNHVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           D+HVNEV++L AGNTS+NEA PMSLDFS+FGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 DDHVNEVRELAAGNTSKNEAAPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ 418

[Close]

BLAST of Sed0001871 vs. ExPASy TrEMBL
Match: A0A6J1BZY1 ([RNA-polymerase]-subunit kinase OS=Momordica charantia OX=3673 GN=LOC111007023 PE=3 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 2.0e-220
Identity = 381/416 (91.59%), Postives = 396/416 (95.19%), Query Frame = 0


Query: 1   MAEPDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALR 60
           M+E DPSKKVADRYLKRE+LGEGTYGVV+KAIDTQTGQ VAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MSELDPSKKVADRYLKREVLGEGTYGVVFKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120
           EIKLLKELKD NIIELIDAFPHK NLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
Sbjct: 61  EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIG NGQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDML 240
           ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPT SQW DML
Sbjct: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML 240

Query: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFP 300
           YLPDYVEFQYVPAPPLRSLFP+ASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAP P
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPIASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPLP 300

Query: 301 TDPCKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDN 360
           TDP KLPRP +KREP+NSRV DLNSNEGP VLSPPRKSRRVMP+RE FE NA R DK D+
Sbjct: 301 TDPSKLPRPTSKREPVNSRVSDLNSNEGPIVLSPPRKSRRVMPEREGFEGNAHRIDKHDD 360

Query: 361 HVNEVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 417
           HVNE++++ A NTS+NE VPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
Sbjct: 361 HVNELREVAAENTSKNEPVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ 416

[Close]

BLAST of Sed0001871 vs. TAIR 10
Match: AT1G18040.1 (cyclin-dependent kinase D1;3 )

HSP 1 Score: 608.6 bits (1568), Expect = 3.7e-174
Identity = 306/412 (74.27%), Postives = 340/412 (82.52%), Query Frame = 0


Query: 4   PDPSKKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIK 63
           P+  KKVADRYLK+E+LG+GTYGVV+KA DT+T Q VAIKKIRLGKQ+EGVN TALREIK
Sbjct: 2   PEQPKKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIK 61

Query: 64  LLKELKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKG 123
           +LKELK  +II LIDAFPHKENLHLVFEFMETDLEAVIRD NIFLSPADIKSYL MT KG
Sbjct: 62  MLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMTFKG 121

Query: 124 LAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELL 183
           LAYCH KWVLHRDMKPNNLLIG +GQLKLADFGLAR+FGSP+R+FTHQVFARWYRAPELL
Sbjct: 122 LAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELL 181

Query: 184 FGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLP 243
           FG KQYG+AVDVWA ACIFAELLLRRPFLQG+SDIDQL KIFAAFGTP + QW D+  LP
Sbjct: 182 FGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLP 241

Query: 244 DYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDP 303
           DYVE+Q+VPAP LRSLFP  SDD LDLLSKMF YDPK+RISI+QALEHRYFTSAP PTDP
Sbjct: 242 DYVEYQFVPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAPTDP 301

Query: 304 CKLPRPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVN 363
            KLP+P  K++  +S       +E  TV SPPRK RRVMP+R        R D L +HV+
Sbjct: 302 AKLPKPVPKQDGKSS----YGKHEAITVQSPPRKLRRVMPER-------GRVDSLKSHVD 361

Query: 364 EVQDLVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQ 416
                      +++  PMSLDF+I   +PPNRPTI SADRSHLKRKLDLEFQ
Sbjct: 362 -----------KDQQAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEFQ 391

[Close]

BLAST of Sed0001871 vs. TAIR 10
Match: AT1G73690.1 (cyclin-dependent kinase D1;1 )

HSP 1 Score: 599.7 bits (1545), Expect = 1.7e-171
Identity = 302/407 (74.20%), Postives = 331/407 (81.33%), Query Frame = 0


Query: 8   KKVADRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           KKVADRYLKRE+LG+GTYGVV+KA DT+ G+ VAIKKIRLGK+KEGVN TALREIKLLKE
Sbjct: 5   KKVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKE 64

Query: 68  LKDSNIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYC 127
           LK  +IIELIDAFPHKENLH+VFEFMETDLEAVIRDRN++LSP D+KSYLQM LKGL YC
Sbjct: 65  LKHPHIIELIDAFPHKENLHIVFEFMETDLEAVIRDRNLYLSPGDVKSYLQMILKGLEYC 124

Query: 128 HKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTK 187
           H KWVLHRDMKPNNLLIGPNGQLKLADFGLAR+FGSP R+FTHQVFARWYRAPELLFG K
Sbjct: 125 HGKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAPELLFGAK 184

Query: 188 QYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVE 247
           QY  AVDVWAA CIFAELLLRRPFLQG+SDIDQL KIFAAFGTP + QW DM+ LPDYVE
Sbjct: 185 QYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICLPDYVE 244

Query: 248 FQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLP 307
           +Q+VPAP LRSL P  S+D LDLLSKMF YDPKSRISIQQAL+HRYFTSAP PTDP KLP
Sbjct: 245 YQFVPAPSLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLP 304

Query: 308 RPAAKREPMNSRVIDLNSNEGPTVLSPPRKSRRVMPDREAFEENAQRADKLDNHVNEVQD 367
           RP +K++  +S     +  E   VLSP  K RRVMPDR           K  N   +   
Sbjct: 305 RPVSKQDAKSSD----SKLEAIKVLSPAHKFRRVMPDR----------GKSGNGFKDQSV 364

Query: 368 LVAGNTSRNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEF 415
            V    S +   PMSLDF+I   +PPNRPTI SADRSHLKRKLDLEF
Sbjct: 365 DVMRQASHDGQAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEF 397

[Close]

BLAST of Sed0001871 vs. TAIR 10
Match: AT1G66750.1 (CDK-activating kinase 4 )

HSP 1 Score: 534.6 bits (1376), Expect = 6.9e-152
Identity = 256/332 (77.11%), Postives = 290/332 (87.35%), Query Frame = 0


Query: 12  DRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKELKDS 71
           DRYL+R+ILGEGTYGVVYKA DT+TG+ VA+KKIRLG QKEGVNFTALREIKLLKEL   
Sbjct: 11  DRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKELNHP 70

Query: 72  NIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKW 131
           +I+ELIDAFPH  +LHLVFE+M+TDLEAVIRDRNIFLSP DIKSY+ MTLKGLAYCHKKW
Sbjct: 71  HIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKKW 130

Query: 132 VLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTKQYGS 191
           VLHRDMKPNNLLIG NG LKLADFGLARLFGSP+RRFTHQVFA WYRAPELLFG++QYG+
Sbjct: 131 VLHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPELLFGSRQYGA 190

Query: 192 AVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVEFQYV 251
            VDVWAA CIFAELLLRRPFL GS++IDQLGKIF AFGTP  SQWSDM+YLPDY+EF Y 
Sbjct: 191 GVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIYLPDYMEFSYT 250

Query: 252 PAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPFPTDPCKLPRPAA 311
           PAPPLR++FPMASDD LDLL+KMF YDP+ RI+IQQAL+HRYF+S+P PT+P KL  PA+
Sbjct: 251 PAPPLRTIFPMASDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSPTEPGKLQIPAS 310

Query: 312 KREPMNSRVIDLNSN-EGPTVLSPPRKSRRVM 343
           K + +  +  + N +   P VLSPP K RRVM
Sbjct: 311 KGDALEPKASEQNQHGNSPAVLSPPGKMRRVM 342

[Close]

BLAST of Sed0001871 vs. TAIR 10
Match: AT3G48750.1 (cell division control 2 )

HSP 1 Score: 273.5 bits (698), Expect = 2.9e-73
Identity = 142/286 (49.65%), Postives = 182/286 (63.64%), Query Frame = 0


Query: 12  DRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKELKDS 71
           D+Y K E +GEGTYGVVYKA D  T + +A+KKIRL ++ EGV  TA+REI LLKE++ S
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHS 61

Query: 72  NIIELIDAFPHKENLHLVFEFMETDLEAVIRDRNIFLSPAD-IKSYLQMTLKGLAYCHKK 131
           NI++L D    ++ L+LVFE+++ DL+  +     F      IK+YL   L+G+AYCH  
Sbjct: 62  NIVKLQDVVHSEKRLYLVFEYLDLDLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYCHSH 121

Query: 132 WVLHRDMKPNNLLIG-PNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTKQY 191
            VLHRD+KP NLLI      LKLADFGLAR FG P R FTH+V   WYRAPE+L G+  Y
Sbjct: 122 RVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHY 181

Query: 192 GSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLPDYVE-F 251
            + VD+W+  CIFAE++ ++P   G S+IDQL KIF   GTP    W  +  LPDY   F
Sbjct: 182 STPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGVTSLPDYKSAF 241

Query: 252 QYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYF 295
                  L +  P    D +DLLSKM   DP  RI+ + ALEH YF
Sbjct: 242 PKWKPTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAALEHEYF 287

[Close]

BLAST of Sed0001871 vs. TAIR 10
Match: AT1G67580.1 (Protein kinase superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-67
Identity = 126/308 (40.91%), Postives = 188/308 (61.04%), Query Frame = 0


Query: 12  DRYLKREILGEGTYGVVYKAIDTQTGQIVAIKKIRLGKQKEGVNFTALREIKLLKELKDS 71
           D + +   + EGTYGVVY+A D +TG+IVA+KK+++ K++EG   T+LREI +L      
Sbjct: 404 DEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHP 463

Query: 72  NIIELIDAF--PHKENLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHK 131
           +I+++ +       +++ +V E+ME DL+A++       S +++K  +   L+G+ Y H 
Sbjct: 464 SIVDVKEVVVGSSLDSIFMVMEYMEHDLKALMETMKQRFSQSEVKCLMLQLLEGVKYLHD 523

Query: 132 KWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYRAPELLFGTKQY 191
            WVLHRD+K +NLL+   G+LK+ DFGLAR +GSP + +TH V   WYRAPELL G KQY
Sbjct: 524 NWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQY 583

Query: 192 GSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTSSQWSDMLYLP----DY 251
            +A+D+W+  CI AELL++ P   G ++ DQL KIF   GTP  S W     LP    ++
Sbjct: 584 STAIDMWSLGCIMAELLMKAPLFNGKTEFDQLDKIFRILGTPNESIWPGFSKLPGVKVNF 643

Query: 252 VEFQY------VPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPF 308
           V+ QY       PA       P+ SD   DLL+K+  YDP+ RI++ +AL+H +F   P 
Sbjct: 644 VKHQYNLLRKKFPATSFTGA-PVLSDAGFDLLNKLLTYDPERRITVNEALKHDWFREVPL 703

The following BLAST results are available for this feature:

BLAST of Sed0001871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531764.1	3.0e-226	93.99	cyclin-dependent kinase D-3 [Cucurbita pepo subsp. pepo] >KAG6587670.1 Cyclin-de...	[more]
XP_023005117.1	3.9e-226	93.99	cyclin-dependent kinase D-3 [Cucurbita maxima]	[more]
XP_038880307.1	8.8e-226	93.75	cyclin-dependent kinase D-3 [Benincasa hispida]	[more]
XP_022929107.1	1.5e-225	93.75	cyclin-dependent kinase D-3 [Cucurbita moschata]	[more]
XP_008453457.1	9.7e-225	93.30	PREDICTED: cyclin-dependent kinase D-3-like [Cucumis melo]	[more]

BLAST of Sed0001871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29620	4.6e-177	75.68	Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKD-1 P...	[more]
A2Y4B6	2.3e-176	75.68	Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKD-1 PE=...	[more]
Q9LMT0	5.3e-173	74.27	Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana OX=3702 GN=CDKD-3 PE=1 SV=1	[more]
Q9C9U2	2.4e-170	74.20	Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana OX=3702 GN=CDKD-1 PE=1 SV=1	[more]
Q9C9M7	9.7e-151	77.11	Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana OX=3702 GN=CDKD-2 PE=1 SV=1	[more]

BLAST of Sed0001871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSA7	1.9e-226	93.99	[RNA-polymerase]-subunit kinase OS=Cucurbita maxima OX=3661 GN=LOC111498202 PE=3...	[more]
A0A6J1ELU3	7.3e-226	93.75	[RNA-polymerase]-subunit kinase OS=Cucurbita moschata OX=3662 GN=LOC111435785 PE...	[more]
A0A1S3BWA5	4.7e-225	93.30	[RNA-polymerase]-subunit kinase OS=Cucumis melo OX=3656 GN=LOC103494161 PE=3 SV=...	[more]
A0A0A0LPN4	1.4e-224	93.06	[RNA-polymerase]-subunit kinase OS=Cucumis sativus OX=3659 GN=Csa_1G024870 PE=3 ...	[more]
A0A6J1BZY1	2.0e-220	91.59	[RNA-polymerase]-subunit kinase OS=Momordica charantia OX=3673 GN=LOC111007023 P...	[more]

BLAST of Sed0001871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18040.1	3.7e-174	74.27	cyclin-dependent kinase D1;3	[more]
AT1G73690.1	1.7e-171	74.20	cyclin-dependent kinase D1;1	[more]
AT1G66750.1	6.9e-152	77.11	CDK-activating kinase 4	[more]
AT3G48750.1	2.9e-73	49.65	cell division control 2	[more]
AT1G67580.1	1.4e-67	40.91	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	SMART	SM00220	serkin_6	coord: 1..202 e-value: 1.0E-27 score: 108.1
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 3..202 e-value: 1.4E-46 score: 159.0
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..202 score: 32.018471
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 3..218 e-value: 8.8E-68 score: 230.0
None	No IPR available	PIRSR	PIRSR000606-51	PIRSR000606-51	coord: 16..125 e-value: 2.1E-12 score: 44.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..324
None	No IPR available	PANTHER	PTHR24056:SF470	CYCLIN-DEPENDENT KINASE D-2	coord: 1..268
None	No IPR available	PANTHER	PTHR24056	CELL DIVISION PROTEIN KINASE	coord: 1..268
IPR008271	Serine/threonine-protein kinase, active site	PROSITE	PS00108	PROTEIN_KINASE_ST	coord: 40..52
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 2..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001871.1	Sed0001871.1	mRNA
Sed0001871.2	Sed0001871.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0051726	regulation of cell cycle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0070985	transcription factor TFIIK complex
cellular_component	GO:0005675	transcription factor TFIIH holo complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004693	cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity
molecular_function	GO:0004672	protein kinase activity