Sed0001858 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGCTTTACTTCAATCAAGAAAACCAAATACCATACGCGTTCGAACAGCTTACCGTCTAGACCACACCCCCTCCTTTCAGAGTGTGATGAGCAGTTAACTAAACTACGAGATATTGATTCAACTCCTGCCTCATCATCATCTATAAGCCAACAACTAAACGTCCTCGAGGATTTGCACGAATGCATCGAAAAGTTGCTTTTATTACCCTCCATTCAAGAAGCTTTTATTAAACAATGTGGAGAGAATTGGGTTGATGAGTTGCTGGATGGATCACTTAGGCTGCTTGATATGTGCAGCTCAGTTAAGGATGCTTTGATCCACACTAACGAATGCGCCCGTGAGCTCCAATAGGCCATTCGACGAAGATCCGGGATGGAAATCGAGGTGAAGAAATACTTGGCCTCTAGAAAAGTTATAAAGAGGGCAATCCAAAAGGCCATTGATACTAATAAGAGCATCGAAACAAAAACCAACACGACGGTTAACGGTAGCGACATCCTAACAGCCATGGTTAGCTTGTTGAAGGAAGTGGAAGCAATTAGTCTTAGAATGTTTGTGTCTTTACTTTGCCTTATCTCAGGAAAGAATAGAAAGCCAAAGTCAAGCTGGTCAATTCTTAGTGTTATGCAGAGCAAAAGAGATGTCTCCCCTGAAGTAGAGGCAGATCTCAATGAATTTTCCAATATGGACAATGCATTAAACTCTGTTGCATCCCAAAAGACAAGCAAATGCAAAGACACTCAAATTGTTGAGAATATCCAAAACAAGCTTGAAAAGTTGGAGCTTGGCACTCGAGATTTCGAACAACGAATCGAACTCCTATTTCGACGTTTGATCAAAACTAGAGTCTCCCTCCTCAACATTCTTAGCAACTAGATGAAAACATTTTGATTAATGTACATGTTAACAATTCAGAAAATGTAGATTTTTGAGGAAAAGAATACACATGTGCCTCTTGGCACAATTTTGTACAATTTTGAGTTCATACTGATCTACTTTTCTTTGCAATACCTCCAAATTTCTAAGCAAGAATCTACTATTTTTTCTCTCCAACTTGTCTTGATCCGATCAAATCATGAAAGAAACACAAGGAATCAAACTTGTAATTGGTATTAGAACTCATTATTGTCAAACTGAATCAGTCGAGAAAAAGAAATTGGAATTCGATTCAAGAATGATGAAACTAGCGAAGTATAATCTCAAGAGTCTCCCATTGAAAAACAAGAGCGAATCTCACAACATTTATAAAATACATAGACTATTTCTTTTCAGTATGAAGTGCTGATCAACCTCAATGTACCTAATAAGAGGAACACAAGCAAACTTTCAAATCCAGTGAAACCAAACATCTTCTTGTCTGTGTCCTAAAGCTCATAAAATCATGAAGTAGAGGACTTGATACCAAAGCATACATATCACAAGAATAAAAAATAAAAAAAAAAAAAGAGAAAAACCAGCTGAAATGATGATTTGGGAAACTATACACAAAGACACAATAGTCAAAAGAAAACTCCCAATGAATCCAAATGAAAGTAGGGGTTAAGAGGATCAGATGTGTACGGAGGAAAAGAGGAGAAGAAGGGAATGGAGAGGACACAGAGACAAGAGGAAGAAGATGGGGTTTGTCAGTGGGAGAGAAACCAAATCAAATAAATATGGAAAAAGAAACAATGCATACTTTTTTCTTTTCTTACTTTTATAAAGTGAGAGAGCAATTATGTGCATCATTTTCATCACCATCAACCTTTTGCTACTGTTTCACCATCATATCATCTTTCTCTATTCCCCCCTCCACTTTATTTGTTTGAGTGGTTGGTTCTCTTTTGGGGAGTCATGTCCCCCATGATTCATGAACAAAATGTCTTCTCTCCTTTTCCCCTTTTCTTATGCTTAGTTAGAGATTGTATTACTCCATCTGAAGTATAGTTAACTAAAAATGTTAGATTATGCCAAATGCTTTTGAATTCGTTCTTTAATCTTTTAGGGGATGTTTGGTAATTGTTCATCGACTAAAAAGTTCATGTGCACACAACAACAAATAATTTTCAATCAGTACACATATCACTCCATAAACAATCTTTAATCAGTATACTCATTAGTTAAGATCCGCATATAGTCTTCAATGAGTGCATTACATAGTATGCAATCAAGAAACGGGTAAAAGACGCTCAAAATTTTGCTATGGATGAAATATTTCTAAAAATGTGTTAGACTACCAAAAAGTTGCCAATTTTTTAACTACTTATTTAATTTTCAAAATTAGACTTTAATGATGAAAACATTGATGAAAGATGAAAGCAAAACAAAGAAATTTATTAGTAAAAGTGGTCATTGTATATTCAAAACATGGCAAGGTGTAGTTAGTTGTTGAATTCGTTTGTATTTTCAAAAAATGAACAAAAGTGCTTATTTTGTAGGGGTTTCTCGTTATATCCCCTTGGTGAGCTCGTAGGTCATTTATTACTTTGGGCCACATTTTCCTTCTTCCATGTTTTGAGGCAAAAGAACAAAATGTGTGACATAAACATAAATTTGTGGGCATAAAAAGATAGTACATATGTGTAGATATGAAAAGATCGGTCATATTTGACATGACCTAAACTTTTTTTATGTATCATAAATATAGGTTATGGTTATGTCATAAAATACTATTATGGTTGGTTATAAATAGTTATAAAGAGTTGGTTATAAACAGTTATTAAATGTTTGTTTAGATAGAAGGTTTATAAGTTGTTTTAAGTACTTGTTTAAATAGAGAGATTGAGATAATGGATTGGGCCAACTTTTTTAGATAGAGAGATTGAGATAATGAATTGGGTGAGAGATCTTTTGTTTAAAGGAATACTTGGTACTTCGAGAAGTACTTAGTATATATTGTCTATCATTTGTGGAGATAATAATGTGTCACATCTTTAATATATTATTTCTATCTTATTATAAATTATCATTTTTTAATGTATCTTTTATATAATAGTATTACTTTTTGGCATATTATTATCTTCACAAAAGATGAGAAGTATGCATTAGTACCCAAGTTTTACTTTTTGGTATAAAAGAGAATAATTATTTTATTAATATAAGACATTTAGTAAAACTAAAAGCAAAAAATCACAAAAACTTAAATCTGAAGTAAAAATATTATATTAGGAAAGTTGAATTATTTTTAGCATAGCTTACTTTTGTAAATTTACATAGTACATACAAAAACCTCAACTGATCACAATGATTAATTCTTTTTTTTTCTTTCTCATTCCAAGTGTCCAACTATAGCAAAACTGTACCCACTTTATGGCTCATAATAACACAAGAACTTCCAAAACAATCATAATTACATACTAATTTCCCTCACTATCCCAATAAACAGAGTTAAAACTGTCCCACTATTTACTACCCTACCCTTACTCATGTGGTTGACCCAAATGGAAAAAGAAGAGGCTCCACTGTGTCATGATTGCCATTAAAACTAAACAAGAACATGGAAAGACCAGAAGAGAGACCACTACACCAAACAGCAAGTTGACAATAAGAGACACAAAAAGGGTCCCTAG ATGGCTGGCTTTACTTCAATCAAGAAAACCAAATACCATACGCGTTCGAACAGCTTACCGTCTAGACCACACCCCCTCCTTTCAGAGTGTGATGAGCAGTTAACTAAACTACGAGATATTGATTCAACTCCTGCCTCATCATCATCTATAAGCCAACAACTAAACGTCCTCGAGGATTTGCACGAATGCATCGAAAAGTTGCTTTTATTACCCTCCATTCAAGAAGCTTTTATTAAACAATGTGGAGAGAATTGGGTTGATGAGTTGCTGGATGGATCACTTAGGCTGCTTGATATGTGCAGCTCAGCCATTCGACGAAGATCCGGGATGGAAATCGAGGTGAAGAAATACTTGGCCTCTAGAAAAGTTATAAAGAGGGCAATCCAAAAGGCCATTGATACTAATAAGAGCATCGAAACAAAAACCAACACGACGGTTAACGGTAGCGACATCCTAACAGCCATGGTTAGCTTGTTGAAGGAAGTGGAAGCAATTAGTCTTAGAATGTTTGTGTCTTTACTTTGCCTTATCTCAGGAAAGAATAGAAAGCCAAAGTCAAGCTGGTCAATTCTTAGTGTTATGCAGAGCAAAAGAGATGTCTCCCCTGAAGTAGAGGCAGATCTCAATGAATTTTCCAATATGGACAATGCATTAAACTCTGTTGCATCCCAAAAGACAAGCAAATGCAAAGACACTCAAATTGTTGAGAATATCCAAAACAAGCTTGAAAAGTTGGAGCTTGGCACTCGAGATTTCGAACAACGAATCGAACTCCTATTTCGACGTTTGATCAAAACTAGAGTCTCCCTCCTCAACATTCTTAAGGATCAGATGTGTACGGAGGAAAAGAGGAGAAGAAGGGAATGGAGAGGACACAGAGACAAGAGGAAGAAGATGGGGTTTAGAGACCACTACACCAAACAGCAAGTTGACAATAAGAGACACAAAAAGGGTCCCTAG ATGGCTGGCTTTACTTCAATCAAGAAAACCAAATACCATACGCGTTCGAACAGCTTACCGTCTAGACCACACCCCCTCCTTTCAGAGTGTGATGAGCAGTTAACTAAACTACGAGATATTGATTCAACTCCTGCCTCATCATCATCTATAAGCCAACAACTAAACGTCCTCGAGGATTTGCACGAATGCATCGAAAAGTTGCTTTTATTACCCTCCATTCAAGAAGCTTTTATTAAACAATGTGGAGAGAATTGGGTTGATGAGTTGCTGGATGGATCACTTAGGCTGCTTGATATGTGCAGCTCAGCCATTCGACGAAGATCCGGGATGGAAATCGAGGTGAAGAAATACTTGGCCTCTAGAAAAGTTATAAAGAGGGCAATCCAAAAGGCCATTGATACTAATAAGAGCATCGAAACAAAAACCAACACGACGGTTAACGGTAGCGACATCCTAACAGCCATGGTTAGCTTGTTGAAGGAAGTGGAAGCAATTAGTCTTAGAATGTTTGTGTCTTTACTTTGCCTTATCTCAGGAAAGAATAGAAAGCCAAAGTCAAGCTGGTCAATTCTTAGTGTTATGCAGAGCAAAAGAGATGTCTCCCCTGAAGTAGAGGCAGATCTCAATGAATTTTCCAATATGGACAATGCATTAAACTCTGTTGCATCCCAAAAGACAAGCAAATGCAAAGACACTCAAATTGTTGAGAATATCCAAAACAAGCTTGAAAAGTTGGAGCTTGGCACTCGAGATTTCGAACAACGAATCGAACTCCTATTTCGACGTTTGATCAAAACTAGAGTCTCCCTCCTCAACATTCTTAAGGATCAGATGTGTACGGAGGAAAAGAGGAGAAGAAGGGAATGGAGAGGACACAGAGACAAGAGGAAGAAGATGGGGTTTAGAGACCACTACACCAAACAGCAAGTTGACAATAAGAGACACAAAAAGGGTCCCTAG MAGFTSIKKTKYHTRSNSLPSRPHPLLSECDEQLTKLRDIDSTPASSSSISQQLNVLEDLHECIEKLLLLPSIQEAFIKQCGENWVDELLDGSLRLLDMCSSAIRRRSGMEIEVKKYLASRKVIKRAIQKAIDTNKSIETKTNTTVNGSDILTAMVSLLKEVEAISLRMFVSLLCLISGKNRKPKSSWSILSVMQSKRDVSPEVEADLNEFSNMDNALNSVASQKTSKCKDTQIVENIQNKLEKLELGTRDFEQRIELLFRRLIKTRVSLLNILKDQMCTEEKRRRREWRGHRDKRKKMGFRDHYTKQQVDNKRHKKGP Homology
BLAST of Sed0001858 vs. NCBI nr
Match: XP_031744384.1 (uncharacterized protein LOC101210854 [Cucumis sativus] >KGN43313.1 hypothetical protein Csa_020223 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 1.7e-104 Identity = 217/296 (73.31%), Postives = 243/296 (82.09%), Query Frame = 0
BLAST of Sed0001858 vs. NCBI nr
Match: XP_022135914.1 (uncharacterized protein LOC111007752 [Momordica charantia]) HSP 1 Score: 386.3 bits (991), Expect = 2.5e-103 Identity = 214/295 (72.54%), Postives = 240/295 (81.36%), Query Frame = 0
BLAST of Sed0001858 vs. NCBI nr
Match: XP_008447880.1 (PREDICTED: uncharacterized protein LOC103490233 [Cucumis melo] >XP_008447881.1 PREDICTED: uncharacterized protein LOC103490233 [Cucumis melo] >KAA0046635.1 uncharacterized protein E6C27_scaffold178G00090 [Cucumis melo var. makuwa] >TYK23318.1 uncharacterized protein E5676_scaffold142G003770 [Cucumis melo var. makuwa]) HSP 1 Score: 386.0 bits (990), Expect = 3.2e-103 Identity = 216/296 (72.97%), Postives = 240/296 (81.08%), Query Frame = 0
BLAST of Sed0001858 vs. NCBI nr
Match: XP_038887260.1 (uncharacterized protein LOC120077454 [Benincasa hispida] >XP_038887261.1 uncharacterized protein LOC120077454 [Benincasa hispida] >XP_038887262.1 uncharacterized protein LOC120077454 [Benincasa hispida]) HSP 1 Score: 385.6 bits (989), Expect = 4.2e-103 Identity = 220/296 (74.32%), Postives = 243/296 (82.09%), Query Frame = 0
BLAST of Sed0001858 vs. NCBI nr
Match: KAG6572157.1 (hypothetical protein SDJN03_28885, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 382.1 bits (980), Expect = 4.7e-102 Identity = 212/294 (72.11%), Postives = 239/294 (81.29%), Query Frame = 0
BLAST of Sed0001858 vs. ExPASy TrEMBL
Match: A0A0A0K655 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G021910 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 8.3e-105 Identity = 217/296 (73.31%), Postives = 243/296 (82.09%), Query Frame = 0
BLAST of Sed0001858 vs. ExPASy TrEMBL
Match: A0A6J1C2U0 (uncharacterized protein LOC111007752 OS=Momordica charantia OX=3673 GN=LOC111007752 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 1.2e-103 Identity = 214/295 (72.54%), Postives = 240/295 (81.36%), Query Frame = 0
BLAST of Sed0001858 vs. ExPASy TrEMBL
Match: A0A1S3BIG4 (uncharacterized protein LOC103490233 OS=Cucumis melo OX=3656 GN=LOC103490233 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.6e-103 Identity = 216/296 (72.97%), Postives = 240/296 (81.08%), Query Frame = 0
BLAST of Sed0001858 vs. ExPASy TrEMBL
Match: A0A5A7TZ33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003770 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.6e-103 Identity = 216/296 (72.97%), Postives = 240/296 (81.08%), Query Frame = 0
BLAST of Sed0001858 vs. ExPASy TrEMBL
Match: A0A6J1GKS3 (uncharacterized protein LOC111455262 OS=Cucurbita moschata OX=3662 GN=LOC111455262 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.9e-101 Identity = 213/294 (72.45%), Postives = 239/294 (81.29%), Query Frame = 0
BLAST of Sed0001858 vs. TAIR 10
Match: AT2G17080.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 144.1 bits (362), Expect = 2.0e-34 Identity = 111/282 (39.36%), Postives = 160/282 (56.74%), Query Frame = 0
BLAST of Sed0001858 vs. TAIR 10
Match: AT2G17070.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 142.9 bits (359), Expect = 4.5e-34 Identity = 104/280 (37.14%), Postives = 161/280 (57.50%), Query Frame = 0
BLAST of Sed0001858 vs. TAIR 10
Match: AT4G35200.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 141.4 bits (355), Expect = 1.3e-33 Identity = 108/280 (38.57%), Postives = 158/280 (56.43%), Query Frame = 0
BLAST of Sed0001858 vs. TAIR 10
Match: AT4G35210.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30 Identity = 100/280 (35.71%), Postives = 155/280 (55.36%), Query Frame = 0
BLAST of Sed0001858 vs. TAIR 10
Match: AT4G35690.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24 Identity = 89/292 (30.48%), Postives = 152/292 (52.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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