Sed0001818 (gene) Chayote v1

Overview


Name	Sed0001818
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA ligase 1
Location	LG09: 24270632 .. 24274177 (+)
RNA-Seq Expression	Sed0001818
Synteny	Sed0001818

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTTTTCCCTTTCAAACGAGAACCGGATGAATCTCCCCCAAAACCCACTTCTTCTTCCATTTCTCTCAGATCTCTGAAGAAATTCGAAGCAAATGGAAACTTCCATGAAAACCCACTAACCAAATCTTCTTCTTCCAAGCATTTACTTCCAATTTTTCGCCAAATAGAAATTAGGGTTTCTGAATTGTACAAGTGATGGGCTGCTTTTTCGCCTGCTTTGGTTCATCCAAAGATGCCAAACGCCTCAAGAACCGTCGTGCAGATCAACGATCCACTGTTCAGGTTATTCATCTTCAGTATTCTTGAGAAATTCGTGGGCAAGAATTTTGTTCTTTGATTTTTTTTTATTTTAAGTTTTGAATGTTGTGCTTTGCTGCAGAGGAATGCGATCACTAATTCCATTCAACAATCTTCTTCTGTTCATACATTGCTTCATGATTCTAACAACAAGCCTTCGCATTCGCTTCCGGAAGAAGCTGGGTTAGTAGTTCTAATTTCGATTGCTTTCTCTTTTGTTTCGCGAAAAATCCATTTATACATATAAACTTGTGGATGTACCATTTTCTTTTTCTTTTTTTAGTTTTCCATCTGATTCGAACTTGCAACTTCGTGGTCGAGAATATCTATTGATTACCATTTAACTAAGCTCTTTTGGCCAGATGTGTGCATTAAAACTCGAAACTCTTAGGTCCCTTTTGATAATTTAAGCCTATTTCTATTCAAATTTCCTACCATGTGCTCCATTTTTCCTACAATGTATCTATCTTTTTTTAAGAAAGTAGGAAAATATTAACTAAATTTCAAAAACATAAACAAGTTTTTGGAAGCTACTTTTTTTCGTTTACAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATCTAGATATCCAAATAAGGAAAAGGTAGAATAAGGTAGTTGTTGTAGGCTTAAATTTCATAAACAAAAAATGAAAAATAAAATGGTTATCAAACGGGGCCTTAGTTATATATTTAAACTCCTATTTCATCGTTAAGTGCTTGGGGTCTTTTGCTCACAAAAGTGAACTAGTTTAGACCCCTTTGTGATTTATAGTTATTTTTACATGAAATTGCTCCAAATTTATCTAAATAAAAGTATTCGTTCTCTTAAAATTCCACTAGAGTAGCAAAGAACAATTAGATTTACTGATAAAGTAAAGAAAACAATCGAGAAAAGTGAAAAGTTGGCTCGTTTGATAACCATTTTGTTTTTGAAATTTAAGCCTACAACAGCTAATTTGTCATATGTTTTTTCTTACTTGGATATTTACCTCTCACCTATACTTATAGAAACCAAATCAAAATTTGAAAAGAAAATGTAGCTTCTAAAAGCCTGTTTTTGTTTTTTTTCAAAATCGGGAAATCGGAGCTTCGCAACCCATATACCTGGGGCACTACTGGCCCGTCCCACGGCTGTGAGTTGAGATACTTTGAAGAGTATTCTAGTTTAAGCGCTTTCCAGCGGTCTCGAACTAGGAATCTCTCAAGGAAGCTTGTTTTTATTTTTGAAAGTTGGTTAGCATTCATACTTTCTGTAGAAAAGATGAATATACTGTAGGAAAGGTGGAACACATGGTAGGAAATTTGAGTAAGAATAGACTTAGATTTTAAAAATAAAAAACAAAAACCCAAATGATTATCAAATGAAGCCTAAAATATTGGTACTATCTATTTAATTTCAGCTTTTCTTTCTAATTAATGATAACCTTGTATGTGAAAGTCATGCATCCCCAAGAAGTGACTTCATTGATAAAAATTTGGGGTCTTTTTATCATACTGGTTTAGAAGTCTCAAGTTTATATTATTTGATGGGCTTAAAAATAAAAACCCTTGATGTCTCCTGAATTCATGCCTTCGAGGTACTCTAAGATATTGGAGAGCCAATCCCTGACTTCTTGATCATAAATATCACGCAAAAGATTACTCATAAAAGATTACTTAGGAAAGCTTAATTTTAATTGATGCAATTATTAATTTAGTTTTAAGAGAGATACAATGCTGTAAAAATTATATTTTTCTCTCTTTTTCTTTTTTCTTCCTTATGCAATTTTGGTTTTGGTTAGAAATAAGAATTATGTGGCTTTTGGTCACAGGAATTGGAACTTCAGTACAACAGAGGAAGTGACTTCTGTGAAATCCCATGAGCATGTTGTTTTACCCCAGGAAGATGCTGTTTCAATTCATGAGAAGAAACAAGATCAAAAGGAAGAGGATTTGGAAAAATCAAGCAAACCGGAATCTTCATCTGAAGATTTTTCTGTTCCTTTCAATCCCAACTTCAGATCATCTCACCCTCCAATTGATCGATACAGGAACTGTAAGGATAGTGATGATGAGGATGAAGTTTATAGTGATCATCTAGCTAGTGATGACAATGATGAAAATGAAGTTTCTTCCGTGGCTGATAGTTCGATGTATGATTCCAGGCTAAACAGAAACATTGTGAGGCATAGGAATGCTTATATTTGCCCTGTACTGAATCCAGTTGAAAATCTTTCTCAATGGAATGCTGTGAAATTAAAGGGGGCATTTCCATCAACACCTCAGAAAGAGAATCTGGAGTTAGAACAATCATCAACTAATGAGGATTGTCCACACAGTTCCAAGTCGAGTCGAGAAGTGCGTGTTGATGCCAGCCTTTCCAACTGGCTGGTTTCATCAGAAGTAACACCAGTCAGTAAGATTACTACTACAATGGATTTGGAAGCCACCACTACTCCAGTAAAGAGCAGCATGATGCAAGGATTGTGCTCGATGAGAAGTAGCGGTCACAATGCGATGCCTGTGGCTGGAACGGTTGATACATATTGGAGGCAGGGAGTGAGCGATAAGGATCGTGATTCGGCCTCATCATTTAAAGGAATACCAAATACAACCAGCAAGTATAGAGAGGTAGATTTGAAGTAGTAACTTCGTAAAATGTATTGAAAATTTTGGTGGTGGCAATGGAGGAGGGAGGAACTGAGCTAAGTTGTTCTTTTGTTTGTTGGTGCAGGATAAGACAGTGAAGTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTCTGAACAGTAGAGGAGCTGCTAAAGCTTGATGCATATCGAGCACGGTTAACTGGATTTGGGAAGATCGGATCACCTCCCGATAACCGAAAATTACCCTAGGGTTTTGTACTAACTATTTAATTTTCTTCTATTTGGTCGTGTGTAAAAGCGTGCATATGTTTATTTGTTTGTAAATCATTTGTTCACTGTTTCCTATAACCTACCATGTAATATCTACAACAAACTGTCGGCGAATTATTAACCCTTTTAAGACCTTGTCTCACTTAGTGATGGATTTCATATGAGGGTATATTAGTAAATATACTAGGAGTTTGTTAGGCATTTTGGTTATAAATAGTGTGTTAGACAGGTATCAAATATTGAAGCCATTGTGGTATCGTCTTGAATGAGCTCAAGAATGGAAAGATCCAAGATTTATCTTGTAATTTATGTTATTTCGATATCAATAGAGTTGGGTTCTATCATTATGCTAG

mRNA sequence

GTTTTTTTTCCCTTTCAAACGAGAACCGGATGAATCTCCCCCAAAACCCACTTCTTCTTCCATTTCTCTCAGATCTCTGAAGAAATTCGAAGCAAATGGAAACTTCCATGAAAACCCACTAACCAAATCTTCTTCTTCCAAGCATTTACTTCCAATTTTTCGCCAAATAGAAATTAGGGTTTCTGAATTGTACAAGTGATGGGCTGCTTTTTCGCCTGCTTTGGTTCATCCAAAGATGCCAAACGCCTCAAGAACCGTCGTGCAGATCAACGATCCACTGTTCAGAGGAATGCGATCACTAATTCCATTCAACAATCTTCTTCTGTTCATACATTGCTTCATGATTCTAACAACAAGCCTTCGCATTCGCTTCCGGAAGAAGCTGGGAATTGGAACTTCAGTACAACAGAGGAAGTGACTTCTGTGAAATCCCATGAGCATGTTGTTTTACCCCAGGAAGATGCTGTTTCAATTCATGAGAAGAAACAAGATCAAAAGGAAGAGGATTTGGAAAAATCAAGCAAACCGGAATCTTCATCTGAAGATTTTTCTGTTCCTTTCAATCCCAACTTCAGATCATCTCACCCTCCAATTGATCGATACAGGAACTGTAAGGATAGTGATGATGAGGATGAAGTTTATAGTGATCATCTAGCTAGTGATGACAATGATGAAAATGAAGTTTCTTCCGTGGCTGATAGTTCGATGTATGATTCCAGGCTAAACAGAAACATTGTGAGGCATAGGAATGCTTATATTTGCCCTGTACTGAATCCAGTTGAAAATCTTTCTCAATGGAATGCTGTGAAATTAAAGGGGGCATTTCCATCAACACCTCAGAAAGAGAATCTGGAGTTAGAACAATCATCAACTAATGAGGATTGTCCACACAGTTCCAAGTCGAGTCGAGAAGTGCGTGTTGATGCCAGCCTTTCCAACTGGCTGGTTTCATCAGAAGTAACACCAGTCAGTAAGATTACTACTACAATGGATTTGGAAGCCACCACTACTCCAGTAAAGAGCAGCATGATGCAAGGATTGTGCTCGATGAGAAGTAGCGGTCACAATGCGATGCCTGTGGCTGGAACGGTTGATACATATTGGAGGCAGGGAGTGAGCGATAAGGATCGTGATTCGGCCTCATCATTTAAAGGAATACCAAATACAACCAGCAAGTATAGAGAGGATAAGACAGTGAAGTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTCTGAACAGTAGAGGAGCTGCTAAAGCTTGATGCATATCGAGCACGGTTAACTGGATTTGGGAAGATCGGATCACCTCCCGATAACCGAAAATTACCCTAGGGTTTTGTACTAACTATTTAATTTTCTTCTATTTGGTCGTGTGTAAAAGCGTGCATATGTTTATTTGTTTGTAAATCATTTGTTCACTGTTTCCTATAACCTACCATGTAATATCTACAACAAACTGTCGGCGAATTATTAACCCTTTTAAGACCTTGTCTCACTTAGTGATGGATTTCATATGAGGGTATATTAGTAAATATACTAGGAGTTTGTTAGGCATTTTGGTTATAAATAGTGTGTTAGACAGGTATCAAATATTGAAGCCATTGTGGTATCGTCTTGAATGAGCTCAAGAATGGAAAGATCCAAGATTTATCTTGTAATTTATGTTATTTCGATATCAATAGAGTTGGGTTCTATCATTATGCTAG

Coding sequence (CDS)

ATGGGCTGCTTTTTCGCCTGCTTTGGTTCATCCAAAGATGCCAAACGCCTCAAGAACCGTCGTGCAGATCAACGATCCACTGTTCAGAGGAATGCGATCACTAATTCCATTCAACAATCTTCTTCTGTTCATACATTGCTTCATGATTCTAACAACAAGCCTTCGCATTCGCTTCCGGAAGAAGCTGGGAATTGGAACTTCAGTACAACAGAGGAAGTGACTTCTGTGAAATCCCATGAGCATGTTGTTTTACCCCAGGAAGATGCTGTTTCAATTCATGAGAAGAAACAAGATCAAAAGGAAGAGGATTTGGAAAAATCAAGCAAACCGGAATCTTCATCTGAAGATTTTTCTGTTCCTTTCAATCCCAACTTCAGATCATCTCACCCTCCAATTGATCGATACAGGAACTGTAAGGATAGTGATGATGAGGATGAAGTTTATAGTGATCATCTAGCTAGTGATGACAATGATGAAAATGAAGTTTCTTCCGTGGCTGATAGTTCGATGTATGATTCCAGGCTAAACAGAAACATTGTGAGGCATAGGAATGCTTATATTTGCCCTGTACTGAATCCAGTTGAAAATCTTTCTCAATGGAATGCTGTGAAATTAAAGGGGGCATTTCCATCAACACCTCAGAAAGAGAATCTGGAGTTAGAACAATCATCAACTAATGAGGATTGTCCACACAGTTCCAAGTCGAGTCGAGAAGTGCGTGTTGATGCCAGCCTTTCCAACTGGCTGGTTTCATCAGAAGTAACACCAGTCAGTAAGATTACTACTACAATGGATTTGGAAGCCACCACTACTCCAGTAAAGAGCAGCATGATGCAAGGATTGTGCTCGATGAGAAGTAGCGGTCACAATGCGATGCCTGTGGCTGGAACGGTTGATACATATTGGAGGCAGGGAGTGAGCGATAAGGATCGTGATTCGGCCTCATCATTTAAAGGAATACCAAATACAACCAGCAAGTATAGAGAGGATAAGACAGTGAAGTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTCTGAACAGTAGAGGAGCTGCTAAAGCTTGA

Protein sequence

MGCFFACFGSSKDAKRLKNRRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSHSLPEEAGNWNFSTTEEVTSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESSSEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDENEVSSVADSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTNEDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRSSGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLERALNSRGAAKA

Homology

[Close]

BLAST of Sed0001818 vs. NCBI nr
Match: XP_022992017.1 (uncharacterized protein LOC111488494 [Cucurbita maxima])

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-122
Identity = 259/370 (70.00%), Postives = 284/370 (76.76%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL  +SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNHRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVESNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESS 120
             P EA   G+ N STTEEVTS+K HEHVVLPQED  S+H   QD +E+ +EKSSKPESS
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSMKPHEHVVLPQEDVASVHGMNQDLEEDSVEKSSKPESS 120

Query: 121 SEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------NEVSSVA 180
           SEDF VP NPNFRSS PP+ RYRNCKDSDDED+V+   L  D+NDE        E SSVA
Sbjct: 121 SEDFVVPLNPNFRSSFPPVHRYRNCKDSDDEDDVFDSLLGRDENDEFGMVESMKESSSVA 180

Query: 181 DSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTN 240
           DSSM  SRLN   VRHR A++CPVL PVENLSQWNAVK K A PSTPQKENLELEQ ST 
Sbjct: 181 DSSMSVSRLNPTNVRHRTAFVCPVLKPVENLSQWNAVKSKSALPSTPQKENLELEQESTG 240

Query: 241 EDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRS 300
           E+ P+SSK+S+E+ VDASLSNWL SSE +PVSKIT TM LEAT TPVKSSM+QG  S  S
Sbjct: 241 EEFPYSSKASQELCVDASLSNWLASSEASPVSKITATMALEATVTPVKSSMLQGSSSQNS 300

Query: 301 SGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLER 357
           S H+ +PV  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLER
Sbjct: 301 S-HSELPVVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLER 360

[Close]

BLAST of Sed0001818 vs. NCBI nr
Match: XP_022953628.1 (uncharacterized protein LOC111456104 isoform X1 [Cucurbita moschata])

HSP 1 Score: 439.9 bits (1130), Expect = 2.1e-119
Identity = 257/376 (68.35%), Postives = 281/376 (74.73%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL   SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVYSNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVK------SHEHVVLPQEDAVSIHEKKQDQKEEDLEKS 120
             P EA   G+ N STTEEVTSVK       HEHVVLPQED  SIH   QD +E+ +EKS
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSVKPHEQEHEHEHVVLPQEDVASIHGMNQDLEEDSVEKS 120

Query: 121 SKPESSSEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------N 180
           SKPESSSEDF VP +PNF+SS PP+ RYRNCKDSDDED+V+  HL  D+NDE        
Sbjct: 121 SKPESSSEDFVVPLDPNFKSSFPPVHRYRNCKDSDDEDDVFESHLGRDENDEFGMVESMK 180

Query: 181 EVSSVADSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLEL 240
           E SSVA SSM  +RLN   VRHR AY+CPVL PVEN+SQWNAVK K A PSTPQKENLEL
Sbjct: 181 ESSSVAHSSMNVNRLNPTNVRHRTAYVCPVLKPVENISQWNAVKSKSALPSTPQKENLEL 240

Query: 241 EQSSTNEDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQG 300
           EQ ST E+ P+SSK+S+E+ VDASLSNWL SSE TP SKIT TM LEAT TPVKSS +QG
Sbjct: 241 EQESTGEEFPYSSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVKSSTLQG 300

Query: 301 LCSMRSSGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPF 357
             S +SS H  +PV  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPF
Sbjct: 301 -SSSQSSSHRELPVVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPF 360

[Close]

BLAST of Sed0001818 vs. NCBI nr
Match: XP_023548184.1 (protein JASON-like [Cucurbita pepo subsp. pepo] >XP_023548185.1 protein JASON-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 4.0e-118
Identity = 255/370 (68.92%), Postives = 277/370 (74.86%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  D RST+QRN I    Q  SS+HTL  DSN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNHRKSRHTDHRSTIQRNEIPTPGQ--SSLHTLPVDSNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESS 120
             P EA   G+ N STTEE+TSVK HEH     E  VS+H   QD +E+ +EKSSKPESS
Sbjct: 61  --PVEARRDGSLNISTTEELTSVKPHEH-----EHVVSVHGMNQDLEEDSVEKSSKPESS 120

Query: 121 SEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------NEVSSVA 180
           SEDF VP NPNFRS  PP+ RYRNCKDSDDED+V+  HL  D+NDE        E SSVA
Sbjct: 121 SEDFVVPLNPNFRSPFPPVHRYRNCKDSDDEDDVFDSHLGRDENDEFGTVESMKESSSVA 180

Query: 181 DSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTN 240
           DSSM  SRLN   VRHR AY+CPVL PVENLSQWNAVK K A PSTPQKENLELEQ ST 
Sbjct: 181 DSSMSVSRLNPTNVRHRTAYVCPVLKPVENLSQWNAVKSKSALPSTPQKENLELEQESTG 240

Query: 241 EDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRS 300
           E+ P+SSK+S+E+ VDASLSNWL SSE TPVSKITTTM LEA  TPVKSS +QG  S +S
Sbjct: 241 EEFPYSSKASQELCVDASLSNWLASSEATPVSKITTTMALEAIVTPVKSSTLQG-SSSQS 300

Query: 301 SGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLER 357
           S H+ +PV   V  Y RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLER
Sbjct: 301 SSHSELPVVRNVVIYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLER 360

[Close]

BLAST of Sed0001818 vs. NCBI nr
Match: KAG6576088.1 (Protein JASON, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431.0 bits (1107), Expect = 9.8e-117
Identity = 253/382 (66.23%), Postives = 279/382 (73.04%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL   SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVYSNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVK------------SHEHVVLPQEDAVSIHEKKQDQKE 120
             P EA   G+ N STTEEVTSVK             HEHVVL QED  S+H   QD +E
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSVKPHEQEQEQEHEHEHEHVVLSQEDVASVHGMNQDLEE 120

Query: 121 EDLEKSSKPESSSEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-- 180
           + +EKSSKPESSSEDF VP NPNF+SS PP+ RY+NCKDSDDED+V+  HL   +NDE  
Sbjct: 121 DSVEKSSKPESSSEDFVVPLNPNFKSSFPPVHRYKNCKDSDDEDDVFESHLGRGENDEFG 180

Query: 181 -----NEVSSVADSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQ 240
                 E SSVADSSM  +RLN   VRHR AY+CPVL PVENLSQWNAVK K   PSTPQ
Sbjct: 181 MVESMKENSSVADSSMNVNRLNPTNVRHRTAYVCPVLKPVENLSQWNAVKSKRTLPSTPQ 240

Query: 241 KENLELEQSSTNEDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVK 300
           KEN+ELEQ ST E+ P+SSK+S+E+ VDASLSNWL SSE TP SKIT TM LEAT TPVK
Sbjct: 241 KENMELEQESTGEEFPYSSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVK 300

Query: 301 SSMMQGLCSMRSSGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVK 357
           SS +QG  S +SS H  +P+  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV 
Sbjct: 301 SSTLQG-SSSQSSSHRELPLVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVN 360

[Close]

BLAST of Sed0001818 vs. NCBI nr
Match: XP_022953629.1 (uncharacterized protein LOC111456104 isoform X2 [Cucurbita moschata])

HSP 1 Score: 426.4 bits (1095), Expect = 2.4e-115
Identity = 251/370 (67.84%), Postives = 275/370 (74.32%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL   SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVYSNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESS 120
             P EA   G+ N STTEEVTSVK HE     QE   SIH   QD +E+ +EKSSKPESS
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSVKPHE-----QEHVASIHGMNQDLEEDSVEKSSKPESS 120

Query: 121 SEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------NEVSSVA 180
           SEDF VP +PNF+SS PP+ RYRNCKDSDDED+V+  HL  D+NDE        E SSVA
Sbjct: 121 SEDFVVPLDPNFKSSFPPVHRYRNCKDSDDEDDVFESHLGRDENDEFGMVESMKESSSVA 180

Query: 181 DSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTN 240
            SSM  +RLN   VRHR AY+CPVL PVEN+SQWNAVK K A PSTPQKENLELEQ ST 
Sbjct: 181 HSSMNVNRLNPTNVRHRTAYVCPVLKPVENISQWNAVKSKSALPSTPQKENLELEQESTG 240

Query: 241 EDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRS 300
           E+ P+SSK+S+E+ VDASLSNWL SSE TP SKIT TM LEAT TPVKSS +QG  S +S
Sbjct: 241 EEFPYSSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVKSSTLQG-SSSQS 300

Query: 301 SGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLER 357
           S H  +PV  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLER
Sbjct: 301 SSHRELPVVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLER 360

[Close]

BLAST of Sed0001818 vs. ExPASy TrEMBL
Match: A0A6J1JNJ1 (uncharacterized protein LOC111488494 OS=Cucurbita maxima OX=3661 GN=LOC111488494 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.8e-123
Identity = 259/370 (70.00%), Postives = 284/370 (76.76%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL  +SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNHRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVESNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESS 120
             P EA   G+ N STTEEVTS+K HEHVVLPQED  S+H   QD +E+ +EKSSKPESS
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSMKPHEHVVLPQEDVASVHGMNQDLEEDSVEKSSKPESS 120

Query: 121 SEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------NEVSSVA 180
           SEDF VP NPNFRSS PP+ RYRNCKDSDDED+V+   L  D+NDE        E SSVA
Sbjct: 121 SEDFVVPLNPNFRSSFPPVHRYRNCKDSDDEDDVFDSLLGRDENDEFGMVESMKESSSVA 180

Query: 181 DSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTN 240
           DSSM  SRLN   VRHR A++CPVL PVENLSQWNAVK K A PSTPQKENLELEQ ST 
Sbjct: 181 DSSMSVSRLNPTNVRHRTAFVCPVLKPVENLSQWNAVKSKSALPSTPQKENLELEQESTG 240

Query: 241 EDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRS 300
           E+ P+SSK+S+E+ VDASLSNWL SSE +PVSKIT TM LEAT TPVKSSM+QG  S  S
Sbjct: 241 EEFPYSSKASQELCVDASLSNWLASSEASPVSKITATMALEATVTPVKSSMLQGSSSQNS 300

Query: 301 SGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLER 357
           S H+ +PV  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLER
Sbjct: 301 S-HSELPVVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLER 360

[Close]

BLAST of Sed0001818 vs. ExPASy TrEMBL
Match: A0A6J1GNU2 (uncharacterized protein LOC111456104 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456104 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 1.0e-119
Identity = 257/376 (68.35%), Postives = 281/376 (74.73%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL   SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVYSNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVK------SHEHVVLPQEDAVSIHEKKQDQKEEDLEKS 120
             P EA   G+ N STTEEVTSVK       HEHVVLPQED  SIH   QD +E+ +EKS
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSVKPHEQEHEHEHVVLPQEDVASIHGMNQDLEEDSVEKS 120

Query: 121 SKPESSSEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------N 180
           SKPESSSEDF VP +PNF+SS PP+ RYRNCKDSDDED+V+  HL  D+NDE        
Sbjct: 121 SKPESSSEDFVVPLDPNFKSSFPPVHRYRNCKDSDDEDDVFESHLGRDENDEFGMVESMK 180

Query: 181 EVSSVADSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLEL 240
           E SSVA SSM  +RLN   VRHR AY+CPVL PVEN+SQWNAVK K A PSTPQKENLEL
Sbjct: 181 ESSSVAHSSMNVNRLNPTNVRHRTAYVCPVLKPVENISQWNAVKSKSALPSTPQKENLEL 240

Query: 241 EQSSTNEDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQG 300
           EQ ST E+ P+SSK+S+E+ VDASLSNWL SSE TP SKIT TM LEAT TPVKSS +QG
Sbjct: 241 EQESTGEEFPYSSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVKSSTLQG 300

Query: 301 LCSMRSSGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPF 357
             S +SS H  +PV  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPF
Sbjct: 301 -SSSQSSSHRELPVVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPF 360

[Close]

BLAST of Sed0001818 vs. ExPASy TrEMBL
Match: A0A6J1GQ79 (uncharacterized protein LOC111456104 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456104 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.2e-115
Identity = 251/370 (67.84%), Postives = 275/370 (74.32%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKN----RRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSH 60
           MGCFFACFGSSKD KRLKN    R  + RST+QRN I    Q  SS+HTL   SN K  H
Sbjct: 1   MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQ--SSLHTLPVYSNKKSLH 60

Query: 61  SLPEEA---GNWNFSTTEEVTSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESS 120
             P EA   G+ N STTEEVTSVK HE     QE   SIH   QD +E+ +EKSSKPESS
Sbjct: 61  --PVEAGRDGSLNISTTEEVTSVKPHE-----QEHVASIHGMNQDLEEDSVEKSSKPESS 120

Query: 121 SEDFSVPFNPNFRSSHPPIDRYRNCKDSDDEDEVYSDHLASDDNDE-------NEVSSVA 180
           SEDF VP +PNF+SS PP+ RYRNCKDSDDED+V+  HL  D+NDE        E SSVA
Sbjct: 121 SEDFVVPLDPNFKSSFPPVHRYRNCKDSDDEDDVFESHLGRDENDEFGMVESMKESSSVA 180

Query: 181 DSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTN 240
            SSM  +RLN   VRHR AY+CPVL PVEN+SQWNAVK K A PSTPQKENLELEQ ST 
Sbjct: 181 HSSMNVNRLNPTNVRHRTAYVCPVLKPVENISQWNAVKSKSALPSTPQKENLELEQESTG 240

Query: 241 EDCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRS 300
           E+ P+SSK+S+E+ VDASLSNWL SSE TP SKIT TM LEAT TPVKSS +QG  S +S
Sbjct: 241 EEFPYSSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVKSSTLQG-SSSQS 300

Query: 301 SGHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLER 357
           S H  +PV  TV TY RQG SDKDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLER
Sbjct: 301 SSHRELPVVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLER 360

[Close]

BLAST of Sed0001818 vs. ExPASy TrEMBL
Match: A0A5D3DLV6 (DNA ligase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001640 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.9e-102
Identity = 237/367 (64.58%), Postives = 263/367 (71.66%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKNRRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSHSLPE 60
           MGCFFACFGSSK++KRLKN      + +QRNAI  + Q  SSVHTLL DSNN   H  P 
Sbjct: 1   MGCFFACFGSSKNSKRLKNHH--HSTIIQRNAIAKTHQ--SSVHTLLDDSNNTFFH--PV 60

Query: 61  EAGNWNFSTTEEVTSVKSH--EHVVLPQEDAVSIHEKKQDQKEED--LEKSSKPESSSED 120
           E GN       EV SVK H  EH+VLPQ+D VS+H KKQ QKEE+   EK SK ESSSED
Sbjct: 61  EVGNRIDGL--EVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKSESSSED 120

Query: 121 FSVPFNPNFRSSHPPIDRYRNCKDSD--DEDEVYSDHLASDDNDE-------NEVSSVAD 180
           F VP NPNF+SS P I RYRNCKDSD  DEDEV+  HL SD+NDE        E SS+ +
Sbjct: 121 FVVPLNPNFKSSCPRIHRYRNCKDSDNEDEDEVFDTHLGSDENDELGIVESMKEDSSLDE 180

Query: 181 SSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTNE 240
           SSM   RLN   VRHR AY+  VLNPVENLSQWNAVK K  F    QKEN+ELEQ S+ +
Sbjct: 181 SSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELEQESSVD 240

Query: 241 DCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRSS 300
             P+SS+ SRE  VDASLSNWL SS+ TPVSKIT TM LEAT TP+KS  +QG  S++ S
Sbjct: 241 GFPYSSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGTLQGSSSLKGS 300

Query: 301 GHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLERA 355
           G + M   GT   Y RQGVS KDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLERA
Sbjct: 301 GDSKMSEVGTARMYRRQGVSHKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLERA 359

[Close]

BLAST of Sed0001818 vs. ExPASy TrEMBL
Match: A0A1S3CCL7 (uncharacterized protein LOC103498917 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498917 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 5.6e-102
Identity = 236/367 (64.31%), Postives = 263/367 (71.66%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKNRRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSHSLPE 60
           MGCFFACFGSSK++KRLKN      + +QRNAI  + Q  SSVHTLL DSNN   H  P 
Sbjct: 1   MGCFFACFGSSKNSKRLKNHHPS--TIIQRNAIAKTHQ--SSVHTLLDDSNNTFFH--PV 60

Query: 61  EAGNWNFSTTEEVTSVKSH--EHVVLPQEDAVSIHEKKQDQKEED--LEKSSKPESSSED 120
           + GN       EV SVK H  EH+VLPQ+D VS+H KKQ QKEE+   EK SK ESSSED
Sbjct: 61  KVGNRIDGL--EVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKSESSSED 120

Query: 121 FSVPFNPNFRSSHPPIDRYRNCKDSD--DEDEVYSDHLASDDNDE-------NEVSSVAD 180
           F VP NPNF+SS P I RYRNCKDSD  DEDEV+  HL SD+NDE        E SS+ +
Sbjct: 121 FVVPLNPNFKSSCPRIHRYRNCKDSDDEDEDEVFDTHLGSDENDELGIVESMKEDSSLDE 180

Query: 181 SSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQSSTNE 240
           SSM   RLN   VRHR AY+  VLNPVENLSQWNAVK K  F    QKEN+ELEQ S+ +
Sbjct: 181 SSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELEQESSVD 240

Query: 241 DCPHSSKSSREVRVDASLSNWLVSSEVTPVSKITTTMDLEATTTPVKSSMMQGLCSMRSS 300
             P+SS+ SRE  VDASLSNWL SS+ TPVSKIT TM LEAT TP+KS  +QG  S++ S
Sbjct: 241 GFPYSSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGNLQGSSSLKGS 300

Query: 301 GHNAMPVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLERA 355
           G + M   GT   Y RQGVS KDRDSASSFKGIPNTTSKYREDKTV WHSTPFETRLERA
Sbjct: 301 GDSKMSEVGTARMYRRQGVSHKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLERA 359

[Close]

BLAST of Sed0001818 vs. TAIR 10
Match: AT1G04030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). )

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-31
Identity = 142/450 (31.56%), Postives = 200/450 (44.44%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKNRRADQRSTVQRNAITNSIQQSSSVHTLLHDSNNKPSHSL-- 60
           MGCF  CFG  K+ +R + R +D+    + N ++    +   ++  +H     P  S+  
Sbjct: 1   MGCFSGCFGGRKNRRRQRRRDSDE---ARDNKLSVETAEPHHLNDRVHIVEEIPKASVIP 60

Query: 61  -------PEEAGNWNFSTTEEVT---SVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSS 120
                   EE  + +  + + VT    VK++EHVV   E++V + E+K ++ E   EK S
Sbjct: 61  ITEICDEAEEKCSPSTISRKRVTFDSKVKTYEHVV--SEESVELSEEKNEEVES--EKRS 120

Query: 121 KPESSSEDFSVPFNPNFRSSHPPIDRYRNCKDSDD----------------EDEVYSDHL 180
              S ++D  +    N   S+P   RY+NC++SDD                ++E YSD  
Sbjct: 121 LKSSKTDDQIIEVASNSSGSYPENHRYKNCRESDDDIEEDEFDCSDSDLDEDEEYYSDVG 180

Query: 181 ASDDNDENEVSSVADSSM------YDSRLNRN--IVRHRNAYICP-VLNPVENLSQWNAV 240
            S+D+  N    V    +       DS+L R+   VR  N Y    VLNPVENL+QW + 
Sbjct: 181 FSEDSLHNPTKEVYTQDIGDKTEEIDSKLRRSNETVRDGNHYDGQGVLNPVENLTQWKSA 240

Query: 241 KLKG-------------------------AFPSTPQKENLELEQSSTNEDCPHSSKSSR- 300
           K KG                         +F + PQ +++ L   S    C    K  R 
Sbjct: 241 KSKGRTKQKQSQKENSNFIADQEEKRDSSSFGTDPQIDDITL---SVKPKCRIEPKKLRN 300

Query: 301 -EVRVDASLSNWLVSSE------------VTPVSKITTT--------------------- 351
            E+ VDASLS WL +SE            +TP    +T+                     
Sbjct: 301 QELAVDASLSTWLSTSESGSECNSASMYTLTPEKLKSTSCYSKPLRINHDDRPVLCALTL 360

[Close]

BLAST of Sed0001818 vs. TAIR 10
Match: AT5G44040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-13
Identity = 88/311 (28.30%), Postives = 136/311 (43.73%), Query Frame = 0


Query: 74  TSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKPESSSEDFSVPFNPNFRSSHPPID 133
           T+VK++EH+ +  +++V + E+K+++      KS +   SSE   V  N +   S+P   
Sbjct: 115 TNVKTYEHIAV--DESVELFEEKKEE-----VKSRQARCSSEGSDVTSNSS--GSYPSNH 174

Query: 134 RYRNCKDSDDEDE-------------------VYSDHLASDDNDENEV---------SSV 193
           RY+NC++SDDE+E                   +  D   +DDN E+++           +
Sbjct: 175 RYQNCRESDDEEEDVTDCDDSDLEDTDDDDCGLLDDDYYNDDNYEDKLHNWDKVVYTEEI 234

Query: 194 ADSSMYDSRLNRN---IVRHRNAYICPVLNPVENLSQWNAVKLKG--AFPSTPQKENLEL 253
           AD+ M   R+       VR R+ Y+  VLNP+ENLSQW AVK KG     + P+KEN+ +
Sbjct: 235 ADNVMDIERVEEKGSVSVRDRSGYVNAVLNPIENLSQWKAVKAKGRTTTQTQPRKENVII 294

Query: 254 EQSSTNEDCPHSSKS---------------SREVRVDASLSNWLVSSEVTP--VSKITTT 313
              S        S +               ++E+ VDASLS WL +S+ T    S + TT
Sbjct: 295 ASFSLESQVDDLSSTFSLNRKSRDETEKQRTQEIAVDASLSTWLSTSQTTTSGCSSVETT 354

Query: 314 MD----------------LEATTTPVKSSMMQGLCSMRSSGHNA--MPVAGTVDTYWRQG 317
           M                 +    T  +        S R S   +   P+ GTV  YW   
Sbjct: 355 MSEKKKYSKLVQCHDERPILGALTAEEIKQFSATNSPRKSPSRSPESPIIGTVGGYWNSH 414

[Close]

BLAST of Sed0001818 vs. TAIR 10
Match: AT2G30820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 293 PVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLERALNSRG 352
           P+ G V  +W +    +         GIPN+T+KY+ED+ V WH+TPFE RLE+AL+  G
Sbjct: 330 PIIGMVAAHWNEKEHSQISPKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSEEG 389

[Close]

BLAST of Sed0001818 vs. TAIR 10
Match: AT2G30820.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 293 PVAGTVDTYWRQGVSDKDRDSASSFKGIPNTTSKYREDKTVKWHSTPFETRLERALNSRG 352
           P+ G V  +W +    +         GIPN+T+KY+ED+ V WH+TPFE RLE+AL+  G
Sbjct: 330 PIIGMVAAHWNEKEHSQISPKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSEEG 389

[Close]

BLAST of Sed0001818 vs. TAIR 10
Match: AT2G33400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 3875 Blast hits to 2949 proteins in 323 species: Archae - 6; Bacteria - 281; Metazoa - 960; Fungi - 593; Plants - 281; Viruses - 98; Other Eukaryotes - 1656 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 4.7e-08
Identity = 80/269 (29.74%), Postives = 119/269 (44.24%), Query Frame = 0


Query: 1   MGCFFACFGSSKDAKRLKNRR----ADQRSTVQRNAITNSIQQSSSVH---TLLHDSNNK 60
           MGCF  CFG S + KR  + R     DQR       +++     S+V      + +SN +
Sbjct: 1   MGCFMGCFGLSSNKKRRNSIRKILPRDQRICSYEPLLSSDPTDFSTVSDNPEKISNSNLR 60

Query: 61  PSHSLPEEAGNWNFSTTEEV---TSVKSHEHVVLPQEDAVSIHEKKQDQKEEDLEKSSKP 120
                 EE       T + V    +V+++E +V       S +E      EE   K  + 
Sbjct: 61  SEVGEEEEKKKVTKKTRKRVRFDLNVQTYEPIV------PSRYENACSDDEEG--KGGRS 120

Query: 121 ESSSEDFSVPFNPNFRSSHPPIDRYRNCKDS--DDEDEV-YSDHLASDD----NDENEVS 180
           + SS     P + + RS +P   RY NC DS  D++DE+ Y +    D+    ++EN+  
Sbjct: 121 KGSSAIDKKPEDLSSRSVYPSNYRYHNCVDSFEDEDDEMGYGESDLEDEDYYTDNENDYE 180

Query: 181 SVADSSMYDSRLNRNIVRHRNAYICPVLNPVENLSQWNAVKLKGAFPSTPQKENLELEQS 240
             AD    +              + P+LNPVENL+QW AVK +        KEN+E    
Sbjct: 181 DDADDEDEEEE------EENEQDVAPLLNPVENLAQWKAVKARPVKVKRVMKENVE---- 240

Query: 241 STNEDCPHSSKS-SREVRVDASLSNWLVS 252
              ED    +K   +E+ V+ SLSNWL S
Sbjct: 241 ---EDMDDQAKPLLKEIIVNTSLSNWLAS 248

The following BLAST results are available for this feature:

BLAST of Sed0001818 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992017.1	1.2e-122	70.00	uncharacterized protein LOC111488494 [Cucurbita maxima]	[more]
XP_022953628.1	2.1e-119	68.35	uncharacterized protein LOC111456104 isoform X1 [Cucurbita moschata]	[more]
XP_023548184.1	4.0e-118	68.92	protein JASON-like [Cucurbita pepo subsp. pepo] >XP_023548185.1 protein JASON-li...	[more]
KAG6576088.1	9.8e-117	66.23	Protein JASON, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022953629.1	2.4e-115	67.84	uncharacterized protein LOC111456104 isoform X2 [Cucurbita moschata]	[more]

BLAST of Sed0001818 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0001818 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNJ1	5.8e-123	70.00	uncharacterized protein LOC111488494 OS=Cucurbita maxima OX=3661 GN=LOC111488494...	[more]
A0A6J1GNU2	1.0e-119	68.35	uncharacterized protein LOC111456104 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQ79	1.2e-115	67.84	uncharacterized protein LOC111456104 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3DLV6	1.9e-102	64.58	DNA ligase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001640 ...	[more]
A0A1S3CCL7	5.6e-102	64.31	uncharacterized protein LOC103498917 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0001818 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04030.1	8.8e-31	31.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44040.1	2.8e-13	28.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G30820.1	1.2e-08	43.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G30820.2	1.2e-08	43.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G33400.1	4.7e-08	29.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..112
None	No IPR available	PANTHER	PTHR33318:SF4	RRNA BIOGENESIS PROTEIN RRP36	coord: 1..351
IPR039300	Protein JASON	PANTHER	PTHR33318	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	coord: 1..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001818.1	Sed0001818.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007142	male meiosis II