Sed0001759 (gene) Chayote v1

Overview


Name	Sed0001759
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor MYB44-like
Location	LG13: 22145449 .. 22146496 (-)
RNA-Seq Expression	Sed0001759
Synteny	Sed0001759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCAATTCCGTACATTCTTGTCTTCCCAAATGAACATTCAAAACTCCTCTTCAAATTCTCCTTCCACCTCCGAATCCTCCTCGTCGGATTCCTCCCTCTCCGGCAAGACTCCGGCCGGAAACTCCGGCCACATCCCGGACAAGATCAAAGGCCCATGGAGCTCCGAAGAGGACCGGATCCTGACCCGACTCGTCGACCGCTACGGACCCAGAAACTGGTCCCTAATTAGCCGCTACATTAAGGGCCGCTCCGGCAAATCCTGCCGCCTCCGGTGGTGCAACCAGCTCTGCCCCGCCGTCGAGCACCGCCCGTTTTCCCCGGCTGAGGACGACGCCATCATCGCCGCCCACTCCCGCTACGGCAACCGCTGGGCCACCATTGCCCGCCTCCTCCCCGGCCGGACCGATAATGCCGTCAAAAACCACTGGAATTCCACTCTCAAGCGCCGCCACCGTCGCTTTACCGCCGGCGATCACACTCCCGACGCCGCCGCCGCCGTCGATGACGATCCTTTGACAGCGCTGACTCTCGCTACTCCCGGAAGTGACGTGGCGGCGGCGGTGGATCGCCGGAGTGAGAGTCTGCCGCCCGGATTCTGGGAGGCGATGAGGGACGTTGTGGCGAGAGAAGTAAGGGAGTATATGACGACGTCGTTTTCGGAAAATTTGGGATTTCAATAAAAAATTAAATAGAAAGGGTAATTATGTAATTTCGGTGGCGGCTCTTTTTGAAAAGTTGTGTGCGTCACAGGCTGTCACCAACGTAAACGGTCACCGTTGCTTAAAATAGAAAAACAAAATATTCCTTTTTTTTTCTAATTTCGATGATTTGCAACTTGTTAGACAACCAACCGATGAATGCCACGTGGATGTGCACTTTGCAAGTGCGGAAAAGTTATTGTGTAATCTTTTAGTTTTTATTGGCTCATGCAAACCATGCAAAAATTATGTAGAAATAGAATAAATAAAGGCTATTAATTATTATTTATTATTTTATGTATTTCAGGCCTTGTGCTGATGAAATTAATTTCACATCATAGAGAAAGG

mRNA sequence

ATTCCAATTCCGTACATTCTTGTCTTCCCAAATGAACATTCAAAACTCCTCTTCAAATTCTCCTTCCACCTCCGAATCCTCCTCGTCGGATTCCTCCCTCTCCGGCAAGACTCCGGCCGGAAACTCCGGCCACATCCCGGACAAGATCAAAGGCCCATGGAGCTCCGAAGAGGACCGGATCCTGACCCGACTCGTCGACCGCTACGGACCCAGAAACTGGTCCCTAATTAGCCGCTACATTAAGGGCCGCTCCGGCAAATCCTGCCGCCTCCGGTGGTGCAACCAGCTCTGCCCCGCCGTCGAGCACCGCCCGTTTTCCCCGGCTGAGGACGACGCCATCATCGCCGCCCACTCCCGCTACGGCAACCGCTGGGCCACCATTGCCCGCCTCCTCCCCGGCCGGACCGATAATGCCGTCAAAAACCACTGGAATTCCACTCTCAAGCGCCGCCACCGTCGCTTTACCGCCGGCGATCACACTCCCGACGCCGCCGCCGCCGTCGATGACGATCCTTTGACAGCGCTGACTCTCGCTACTCCCGGAAGTGACGTGGCGGCGGCGGTGGATCGCCGGAGTGAGAGTCTGCCGCCCGGATTCTGGGAGGCGATGAGGGACGTTGTGGCGAGAGAAGTAAGGGAGTATATGACGACGTCGTTTTCGGAAAATTTGGGATTTCAATAAAAAATTAAATAGAAAGGGTAATTATGTAATTTCGGTGGCGGCTCTTTTTGAAAAGTTGTGTGCGTCACAGGCTGTCACCAACGTAAACGGTCACCGTTGCTTAAAATAGAAAAACAAAATATTCCTTTTTTTTTCTAATTTCGATGATTTGCAACTTGTTAGACAACCAACCGATGAATGCCACGTGGATGTGCACTTTGCAAGTGCGGAAAAGTTATTGTGTAATCTTTTAGTTTTTATTGGCTCATGCAAACCATGCAAAAATTATGTAGAAATAGAATAAATAAAGGCTATTAATTATTATTTATTATTTTATGTATTTCAGGCCTTGTGCTGATGAAATTAATTTCACATCATAGAGAAAGG

Coding sequence (CDS)

ATGAACATTCAAAACTCCTCTTCAAATTCTCCTTCCACCTCCGAATCCTCCTCGTCGGATTCCTCCCTCTCCGGCAAGACTCCGGCCGGAAACTCCGGCCACATCCCGGACAAGATCAAAGGCCCATGGAGCTCCGAAGAGGACCGGATCCTGACCCGACTCGTCGACCGCTACGGACCCAGAAACTGGTCCCTAATTAGCCGCTACATTAAGGGCCGCTCCGGCAAATCCTGCCGCCTCCGGTGGTGCAACCAGCTCTGCCCCGCCGTCGAGCACCGCCCGTTTTCCCCGGCTGAGGACGACGCCATCATCGCCGCCCACTCCCGCTACGGCAACCGCTGGGCCACCATTGCCCGCCTCCTCCCCGGCCGGACCGATAATGCCGTCAAAAACCACTGGAATTCCACTCTCAAGCGCCGCCACCGTCGCTTTACCGCCGGCGATCACACTCCCGACGCCGCCGCCGCCGTCGATGACGATCCTTTGACAGCGCTGACTCTCGCTACTCCCGGAAGTGACGTGGCGGCGGCGGTGGATCGCCGGAGTGAGAGTCTGCCGCCCGGATTCTGGGAGGCGATGAGGGACGTTGTGGCGAGAGAAGTAAGGGAGTATATGACGACGTCGTTTTCGGAAAATTTGGGATTTCAATAA

Protein sequence

MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRHRRFTAGDHTPDAAAAVDDDPLTALTLATPGSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ

Homology

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BLAST of Sed0001759 vs. NCBI nr
Match: XP_038899055.1 (transcription factor MYB44-like [Benincasa hispida])

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90
Identity = 181/227 (79.74%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGP 60
           MN  ++ S+SPSTSESSSSDSSLSGK P  NS  +PDKIKGPWS+EEDR+LTRLV+RYGP
Sbjct: 1   MNNIHNFSSSPSTSESSSSDSSLSGKPPPPNSS-VPDKIKGPWSAEEDRVLTRLVERYGP 60

Query: 61  RNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120
           RNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAIIAAHSRYGNRWATIARL
Sbjct: 61  RNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120

Query: 121 LPGRTDNAVKNHWNSTLKRRHR--RFTAGDHTPDAAA-----AVDDDPLTALTLATP--- 180
           LPGRTDNAVKNHWNSTLKRR R  R +AG+HT DAAA     AV+DDPLTALTLATP   
Sbjct: 121 LPGRTDNAVKNHWNSTLKRRVRDDRNSAGNHTSDAAAGGSFLAVNDDPLTALTLATPGMV 180

Query: 181 -GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
            G +V    DRRSESLP GFWE M+DVVAREVREYMTT+FSEN GF+
Sbjct: 181 AGGEVVPESDRRSESLPAGFWEVMKDVVAREVREYMTTTFSENPGFR 226

[Close]

BLAST of Sed0001759 vs. NCBI nr
Match: XP_008452503.1 (PREDICTED: transcriptional activator Myb-like [Cucumis melo] >KAA0064358.1 transcriptional activator Myb-like [Cucumis melo var. makuwa] >TYK20229.1 transcriptional activator Myb-like [Cucumis melo var. makuwa])

HSP 1 Score: 334.7 bits (857), Expect = 5.8e-88
Identity = 179/228 (78.51%), Postives = 190/228 (83.33%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGP 60
           MNI N SS SPSTSESSSSDSSLSGK P   S  IPDKIKGPWS+EEDR+LTRLV+RYGP
Sbjct: 1   MNIHNFSS-SPSTSESSSSDSSLSGKPPPQTS-PIPDKIKGPWSAEEDRVLTRLVERYGP 60

Query: 61  RNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120
           RNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAIIAAHSRYGNRWATIARL
Sbjct: 61  RNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120

Query: 121 LPGRTDNAVKNHWNSTLKRR---HRRFTAGDHTPDAAA-----AVDDDPLTALTLATP-- 180
           LPGRTDNAVKNHWNSTLKRR    RR ++ +HT D        AVDDDPLTALTLATP  
Sbjct: 121 LPGRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGI 180

Query: 181 --GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
             G +V    DR SESLP GFWE M+DVVAREVREYMTT+FSEN GF+
Sbjct: 181 VGGGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPGFR 226

[Close]

BLAST of Sed0001759 vs. NCBI nr
Match: XP_022982283.1 (transcription factor MYB44-like [Cucurbita maxima])

HSP 1 Score: 334.3 bits (856), Expect = 7.6e-88
Identity = 182/228 (79.82%), Postives = 196/228 (85.96%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGK-TPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYG 60
           M+I +SSS SPSTSESSS DSSLSGK  P+ NSG   DKIKGPWS+EEDR+LTRLV+RYG
Sbjct: 1   MSIHHSSS-SPSTSESSSDDSSLSGKLQPSRNSGD-ADKIKGPWSAEEDRVLTRLVERYG 60

Query: 61  PRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIAR 120
           PRNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAED+AIIAAHSRYGNRWATIAR
Sbjct: 61  PRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDEAIIAAHSRYGNRWATIAR 120

Query: 121 LLPGRTDNAVKNHWNSTLKRRHR--RFTAGDHTPD-----AAAAVDDDPLTALTLATP-- 180
           LLPGRTDNAVKNHWNSTLKRR R    +A DH+ D     +  AVDDDPLTALTLATP  
Sbjct: 121 LLPGRTDNAVKNHWNSTLKRRVRDQGKSAVDHSSDIVGGGSLVAVDDDPLTALTLATPGI 180

Query: 181 --GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
             G DVAAA +RRSESLP GFWEAMRDVVAREVREYMTT+FSEN GF+
Sbjct: 181 VAGGDVAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSENRGFE 226

[Close]

BLAST of Sed0001759 vs. NCBI nr
Match: XP_004141241.1 (transcription factor MYB73 [Cucumis sativus] >KGN55161.1 hypothetical protein Csa_012429 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 1.7e-87
Identity = 178/230 (77.39%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGP 60
           MNI N SS S STSESSSSDSSLSGK P  +S  IPDKIKGPWS+EEDRILTRLV+RYGP
Sbjct: 1   MNIHNFSS-STSTSESSSSDSSLSGKPPP-SSSPIPDKIKGPWSAEEDRILTRLVERYGP 60

Query: 61  RNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120
           RNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAI+AAHSRYGNRWATIARL
Sbjct: 61  RNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIVAAHSRYGNRWATIARL 120

Query: 121 LPGRTDNAVKNHWNSTLKRR---HRRFTAGDHTPDAAA------AVDDDPLTALTLATPG 180
           LPGRTDNAVKNHWNSTLKRR    RR ++ +HT D         AVDDDPLTALTLATPG
Sbjct: 121 LPGRTDNAVKNHWNSTLKRRVRDDRRNSSSNHTSDVVGGGGSFLAVDDDPLTALTLATPG 180

Query: 181 S------DVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGF 216
           +      +V    DRRSE+LP GFWE M+DVVAREVREYMTT+FSEN GF
Sbjct: 181 NVGGGGGEVVRESDRRSENLPAGFWEVMKDVVAREVREYMTTTFSENRGF 228

[Close]

BLAST of Sed0001759 vs. NCBI nr
Match: KAG6608498.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037824.1 Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.0 bits (850), Expect = 3.8e-87
Identity = 181/226 (80.09%), Postives = 194/226 (85.84%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGK-TPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYG 60
           M+I +SSS SPSTSESSS DSSLSGK  P+ NSG   DKIKGPWS+EEDR+LTRLV+RYG
Sbjct: 1   MSIHHSSS-SPSTSESSSDDSSLSGKLQPSRNSGD-ADKIKGPWSAEEDRVLTRLVERYG 60

Query: 61  PRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIAR 120
           PRNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAIIAAHSRYGNRWATIAR
Sbjct: 61  PRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIAR 120

Query: 121 LLPGRTDNAVKNHWNSTLKRRHR--RFTAGDHTPD-----AAAAVDDDPLTALTLATP-- 180
           LLPGRTDNAVKNHWNSTLKRR R  R +A DH+ D     +  AVDDDPLTALTLATP  
Sbjct: 121 LLPGRTDNAVKNHWNSTLKRRVRDQRKSAVDHSSDVVVGGSLVAVDDDPLTALTLATPGI 180

Query: 181 --GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLG 215
             G DVAAA +RRSESLP GFWEAMRDVVAREV+EYMTT+FSE  G
Sbjct: 181 VAGGDVAAASNRRSESLPSGFWEAMRDVVAREVKEYMTTTFSEKSG 224

[Close]

BLAST of Sed0001759 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.0e-44
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           D++KGPWS EED  L R+V++YGPRNWS IS+ I GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 141
           P ED+ I+ A +++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Sed0001759 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.1e-44
Identity = 89/153 (58.17%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           D+IKGPWS EED  L RLV +YGPRNW++IS+ I GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR-----HRRFTAG-DHT 156
             ED+ I  AH+++GN+WATIARLL GRTDNAVKNHWNSTLKR+     HR +    DH 
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 157 P-DAAAAVDDDPLTALTLATPGSDVAAAVDRRS 183
           P   + +    P+      +PGS   + V   S
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSS 155

[Close]

BLAST of Sed0001759 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.7e-43
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           ++IKGPWS EED +L RLV ++GPRNWSLIS+ I GRSGKSCRLRWCNQL P VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 141
             ED+ II AH+R+GN+WATI+RLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of Sed0001759 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-38
Identity = 75/141 (53.19%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           D++KGPWS EED +L+ LV R G RNWS I+R I GRSGKSCRLRWCNQL P +    F+
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRRHRRFTAGDHTPDAAAA 156
             ED AIIAAH+ +GN+WA IA+LLPGRTDNA+KNHWNS L+RR   F    +    +  
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKAKNIGTGSLV 171

Query: 157 VDDDPLTALTLATPGSDVAAA 178
           VDD      T      +  ++
Sbjct: 172 VDDSGFDRTTTVASSEETLSS 192

[Close]

BLAST of Sed0001759 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.7e-35
Identity = 71/127 (55.91%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 14  SESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGR 73
           +E + SD++  GK+          K+KGPW  E+D  LTRLV   GPRNW+LISR I GR
Sbjct: 34  AELAKSDANGGGKS----------KVKGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGR 93

Query: 74  SGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHW 133
           SGKSCRLRWCNQL P ++ +PFS  E+  I++A +  GN+W+ IA+LLPGRTDNA+KNHW
Sbjct: 94  SGKSCRLRWCNQLDPILKRKPFSDEEEHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHW 150

Query: 134 NSTLKRR 141
           NS L+R+
Sbjct: 154 NSNLRRK 150

[Close]

BLAST of Sed0001759 vs. ExPASy TrEMBL
Match: A0A5A7V9U0 (Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003670 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.8e-88
Identity = 179/228 (78.51%), Postives = 190/228 (83.33%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGP 60
           MNI N SS SPSTSESSSSDSSLSGK P   S  IPDKIKGPWS+EEDR+LTRLV+RYGP
Sbjct: 1   MNIHNFSS-SPSTSESSSSDSSLSGKPPPQTS-PIPDKIKGPWSAEEDRVLTRLVERYGP 60

Query: 61  RNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120
           RNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAIIAAHSRYGNRWATIARL
Sbjct: 61  RNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120

Query: 121 LPGRTDNAVKNHWNSTLKRR---HRRFTAGDHTPDAAA-----AVDDDPLTALTLATP-- 180
           LPGRTDNAVKNHWNSTLKRR    RR ++ +HT D        AVDDDPLTALTLATP  
Sbjct: 121 LPGRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGI 180

Query: 181 --GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
             G +V    DR SESLP GFWE M+DVVAREVREYMTT+FSEN GF+
Sbjct: 181 VGGGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPGFR 226

[Close]

BLAST of Sed0001759 vs. ExPASy TrEMBL
Match: A0A1S3BV53 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.8e-88
Identity = 179/228 (78.51%), Postives = 190/228 (83.33%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGP 60
           MNI N SS SPSTSESSSSDSSLSGK P   S  IPDKIKGPWS+EEDR+LTRLV+RYGP
Sbjct: 1   MNIHNFSS-SPSTSESSSSDSSLSGKPPPQTS-PIPDKIKGPWSAEEDRVLTRLVERYGP 60

Query: 61  RNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120
           RNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAIIAAHSRYGNRWATIARL
Sbjct: 61  RNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120

Query: 121 LPGRTDNAVKNHWNSTLKRR---HRRFTAGDHTPDAAA-----AVDDDPLTALTLATP-- 180
           LPGRTDNAVKNHWNSTLKRR    RR ++ +HT D        AVDDDPLTALTLATP  
Sbjct: 121 LPGRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGI 180

Query: 181 --GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
             G +V    DR SESLP GFWE M+DVVAREVREYMTT+FSEN GF+
Sbjct: 181 VGGGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPGFR 226

[Close]

BLAST of Sed0001759 vs. ExPASy TrEMBL
Match: A0A6J1J4G1 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481160 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.7e-88
Identity = 182/228 (79.82%), Postives = 196/228 (85.96%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGK-TPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYG 60
           M+I +SSS SPSTSESSS DSSLSGK  P+ NSG   DKIKGPWS+EEDR+LTRLV+RYG
Sbjct: 1   MSIHHSSS-SPSTSESSSDDSSLSGKLQPSRNSGD-ADKIKGPWSAEEDRVLTRLVERYG 60

Query: 61  PRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIAR 120
           PRNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAED+AIIAAHSRYGNRWATIAR
Sbjct: 61  PRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDEAIIAAHSRYGNRWATIAR 120

Query: 121 LLPGRTDNAVKNHWNSTLKRRHR--RFTAGDHTPD-----AAAAVDDDPLTALTLATP-- 180
           LLPGRTDNAVKNHWNSTLKRR R    +A DH+ D     +  AVDDDPLTALTLATP  
Sbjct: 121 LLPGRTDNAVKNHWNSTLKRRVRDQGKSAVDHSSDIVGGGSLVAVDDDPLTALTLATPGI 180

Query: 181 --GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
             G DVAAA +RRSESLP GFWEAMRDVVAREVREYMTT+FSEN GF+
Sbjct: 181 VAGGDVAAASNRRSESLPSGFWEAMRDVVAREVREYMTTTFSENRGFE 226

[Close]

BLAST of Sed0001759 vs. ExPASy TrEMBL
Match: A0A0A0L4S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638510 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 8.2e-88
Identity = 178/230 (77.39%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MNIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGP 60
           MNI N SS S STSESSSSDSSLSGK P  +S  IPDKIKGPWS+EEDRILTRLV+RYGP
Sbjct: 1   MNIHNFSS-STSTSESSSSDSSLSGKPPP-SSSPIPDKIKGPWSAEEDRILTRLVERYGP 60

Query: 61  RNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARL 120
           RNWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAI+AAHSRYGNRWATIARL
Sbjct: 61  RNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIVAAHSRYGNRWATIARL 120

Query: 121 LPGRTDNAVKNHWNSTLKRR---HRRFTAGDHTPDAAA------AVDDDPLTALTLATPG 180
           LPGRTDNAVKNHWNSTLKRR    RR ++ +HT D         AVDDDPLTALTLATPG
Sbjct: 121 LPGRTDNAVKNHWNSTLKRRVRDDRRNSSSNHTSDVVGGGGSFLAVDDDPLTALTLATPG 180

Query: 181 S------DVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGF 216
           +      +V    DRRSE+LP GFWE M+DVVAREVREYMTT+FSEN GF
Sbjct: 181 NVGGGGGEVVRESDRRSENLPAGFWEVMKDVVAREVREYMTTTFSENRGF 228

[Close]

BLAST of Sed0001759 vs. ExPASy TrEMBL
Match: A0A6J1CD16 (transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111010546 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 177/236 (75.00%), Postives = 188/236 (79.66%), Query Frame = 0


Query: 2   NIQNSSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGPR 61
           N  N+SS+SPSTSESSSSDSSLSGK     +   PDKIKGPWS+EEDRILTRLV+RYGPR
Sbjct: 9   NNYNNSSSSPSTSESSSSDSSLSGKPRPRATAGGPDKIKGPWSAEEDRILTRLVERYGPR 68

Query: 62  NWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARLL 121
           NWSLISRY+KGRSGKSCRLRWCNQLCP VEHRPFSPAEDDAIIAAH+RYGNRWATIARLL
Sbjct: 69  NWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLL 128

Query: 122 PGRTDNAVKNHWNSTLKRRHR-------RFTAGDHTPDAA----------AAVDDDPLTA 181
           PGRTDNAVKNHWNSTLKRR R        F  G+   D             AVDDDPLTA
Sbjct: 129 PGRTDNAVKNHWNSTLKRRVREQRRSAGEFAGGNDNADVVGGGSSASAPFGAVDDDPLTA 188

Query: 182 LTLATP----GSDVAAAVDRRSESLPPGFWEAMRDVVAREVREYMTTSFSENLGFQ 217
           LTLATP    GSDVA A D RSE+LP GFWE MRDV+AREVREYMTT+FSEN GFQ
Sbjct: 189 LTLATPGIGSGSDVAPASDHRSETLPAGFWEMMRDVIAREVREYMTTTFSENSGFQ 244

[Close]

BLAST of Sed0001759 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-45
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           D++KGPWS EED  L R+V++YGPRNWS IS+ I GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 141
           P ED+ I+ A +++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Sed0001759 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 178.3 bits (451), Expect = 6.5e-45
Identity = 89/153 (58.17%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           D+IKGPWS EED  L RLV +YGPRNW++IS+ I GRSGKSCRLRWCNQL P VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR-----HRRFTAG-DHT 156
             ED+ I  AH+++GN+WATIARLL GRTDNAVKNHWNSTLKR+     HR +    DH 
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 157 P-DAAAAVDDDPLTALTLATPGSDVAAAVDRRS 183
           P   + +    P+      +PGS   + V   S
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSS 155

[Close]

BLAST of Sed0001759 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-44
Identity = 79/112 (70.54%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 29  AGNSGHIPDKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCP 88
           +G++    D+IKGPWS EED +L  LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQL P
Sbjct: 2   SGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 89  AVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 141
            VEHR F+  EDD II AH+R+GN+WATIARLL GRTDNA+KNHWNSTLKR+
Sbjct: 62  EVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of Sed0001759 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-44
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 37  DKIKGPWSSEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLCPAVEHRPFS 96
           ++IKGPWS EED +L RLV ++GPRNWSLIS+ I GRSGKSCRLRWCNQL P VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 97  PAEDDAIIAAHSRYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 141
             ED+ II AH+R+GN+WATI+RLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of Sed0001759 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 161.4 bits (407), Expect = 8.2e-40
Identity = 80/136 (58.82%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 6   SSSNSPSTSESSSSDSSLSGKTPAGNSGHIPDKIKGPWSSEEDRILTRLVDRYGPRNWSL 65
           S++     +E ++ DSS  G    G  G I  K+KGPWS+EED +LT+LV + GPRNWSL
Sbjct: 23  SAAIEAELAELAAGDSS-GGGGCGGGGGGIRSKVKGPWSTEEDAVLTKLVRKLGPRNWSL 82

Query: 66  ISRYIKGRSGKSCRLRWCNQLCPAVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLPGRT 125
           I+R I GRSGKSCRLRWCNQL P ++ +PFS  ED  II+AH+ +GN+WA IA+LL GRT
Sbjct: 83  IARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEEDRMIISAHAVHGNKWAVIAKLLTGRT 142

Query: 126 DNAVKNHWNSTLKRRH 142
           DNA+KNHWNSTL+R++
Sbjct: 143 DNAIKNHWNSTLRRKY 157

The following BLAST results are available for this feature:

BLAST of Sed0001759 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899055.1	2.1e-90	79.74	transcription factor MYB44-like [Benincasa hispida]	[more]
XP_008452503.1	5.8e-88	78.51	PREDICTED: transcriptional activator Myb-like [Cucumis melo] >KAA0064358.1 trans...	[more]
XP_022982283.1	7.6e-88	79.82	transcription factor MYB44-like [Cucurbita maxima]	[more]
XP_004141241.1	1.7e-87	77.39	transcription factor MYB73 [Cucumis sativus] >KGN55161.1 hypothetical protein Cs...	[more]
KAG6608498.1	3.8e-87	80.09	Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of Sed0001759 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN12	7.0e-44	74.04	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q9FDW1	9.1e-44	58.17	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
O23160	7.7e-43	74.04	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q42575	2.0e-38	53.19	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	7.7e-35	55.91	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of Sed0001759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9U0	2.8e-88	78.51	Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BV53	2.8e-88	78.51	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 ...	[more]
A0A6J1J4G1	3.7e-88	79.82	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481160 PE=4...	[more]
A0A0A0L4S7	8.2e-88	77.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638510 PE=4 SV=1	[more]
A0A6J1CD16	1.8e-87	75.00	transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111010546 P...	[more]

BLAST of Sed0001759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50060.1	5.0e-45	74.04	myb domain protein 77	[more]
AT5G67300.1	6.5e-45	58.17	myb domain protein r1	[more]
AT2G23290.1	5.5e-44	70.54	myb domain protein 70	[more]
AT4G37260.1	5.5e-44	74.04	myb domain protein 73	[more]
AT3G55730.1	8.2e-40	58.82	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 39..88 e-value: 1.2E-13 score: 61.3 coord: 91..139 e-value: 4.0E-15 score: 66.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 35..86 score: 11.811219
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 87..137 score: 8.966181
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 42..84 e-value: 1.38872E-14 score: 63.3634
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 94..137 e-value: 3.64917E-12 score: 57.2002
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 43..101 e-value: 4.5E-16 score: 58.9
None	No IPR available	GENE3D	1.10.10.60		coord: 94..140 e-value: 1.6E-20 score: 74.8
None	No IPR available	GENE3D	1.10.10.60		coord: 39..91 e-value: 3.7E-21 score: 76.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR45614:SF131	SUBFAMILY NOT NAMED	coord: 1..199
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..199
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 92..141 score: 22.742504
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 35..90 score: 25.130915
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 37..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001759.1	Sed0001759.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding