Sed0001679 (gene) Chayote v1

Overview


Name	Sed0001679
Type	gene
Organism	Sechium edule (Chayote v1)
Description	acidic mammalian chitinase-like
Location	LG10: 31213871 .. 31214743 (-)
RNA-Seq Expression	Sed0001679
Synteny	Sed0001679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCCAAACCACAACATTGGTGAATGCTGGTTATTGGCTTGCCAATACGAATGATACACTTCCAGTTGCAAATATCGATGCTAGTCTTTTCACCCATTTGTTTGTTGGTTATGCTGGTGTCACCTCCGAAACTTATCAAGTCACCATAGATCCTTCTCAAGATATCCTAATTGGGCAATTTTCTTCCATTGTGAAACAAAGCAATCCTGAGGTTAAAACTTTATTGTCCATTGCAGCAGGGAGTGATGTATTCGCAAAAATGGCTGGGTAACTTACAAATCGAGACATCTTCATCAAATCTTCCATTGAAATGGCCAGGGCAGGGGAGTTTGATGGGCTTGATCTCCAATGGTTATACCCATCATATGTTAGTGATCCAATCCTAAAAAGCCAACCAAAAATAGATTAGCTTTAACAACAATTCCAACAACCACACAGCCTAGACTGTCCAAGTCTCGTTCAACAACTTCAGCTTAACAACTAGCATTTCTCACCAACGTCTAGTCTAACTAATTCATGCTTAATTACCATTAATCTACATCTCAGTCCAATTTGACCAACATATAAAGCAACTTAATCAAACTTTACATGTATACCTACCTATAATAACAGGAGTTTCTGAAAGAGAAAGAGATCTTTTAAAAATGAGTATATATTCTAGAAACTAAAAATAGTGAACTCTAAGCAACCAAAGGCTATATATAGATGAATTCAAAACCCTAGAAAGGGTGCCAACTCTTGGAGATTATTCTGCCACAACCTAGATGATGATCGAGTGAAGTTCATGACTCTTGATGACAAGGATCCACACTCTTCAAGCATACGCCACTTTTATCCGTTTATTTATTTTTATTTTGTAGTAGTATAG

mRNA sequence

ATGGCGTCCCAAACCACAACATTGGTGAATGCTGGTTATTGGCTTGCCAATACGAATGATACACTTCCAGTTGCAAATATCGATGCTAGTCTTTTCACCCATTTGTTTGTTGGTTATGCTGGTGTCACCTCCGAAACTTATCAAGTCACCATAGATCCTTCTCAAGATATCCTAATTGGGCAATTTTCTTCCATTGTGAAACAAAGCAATCCTGAGGTTAAAACTTTATTGTCCATTGCAGCAGGGAACATCTTCATCAAATCTTCCATTGAAATGGCCAGGGCAGGGGAGTTTGATGGGCTTGATCTCCAATGGTTATACCCATCATATGGTGCCAACTCTTGGAGATTATTCTGCCACAACCTAGATGATGATCGAGTGAAGTTCATGACTCTTGATGACAAGGATCCACACTCTTCAAGCATACGCCACTTTTATCCGTTTATTTATTTTTATTTTGTAGTAGTATAG

Coding sequence (CDS)

ATGGCGTCCCAAACCACAACATTGGTGAATGCTGGTTATTGGCTTGCCAATACGAATGATACACTTCCAGTTGCAAATATCGATGCTAGTCTTTTCACCCATTTGTTTGTTGGTTATGCTGGTGTCACCTCCGAAACTTATCAAGTCACCATAGATCCTTCTCAAGATATCCTAATTGGGCAATTTTCTTCCATTGTGAAACAAAGCAATCCTGAGGTTAAAACTTTATTGTCCATTGCAGCAGGGAACATCTTCATCAAATCTTCCATTGAAATGGCCAGGGCAGGGGAGTTTGATGGGCTTGATCTCCAATGGTTATACCCATCATATGGTGCCAACTCTTGGAGATTATTCTGCCACAACCTAGATGATGATCGAGTGAAGTTCATGACTCTTGATGACAAGGATCCACACTCTTCAAGCATACGCCACTTTTATCCGTTTATTTATTTTTATTTTGTAGTAGTATAG

Protein sequence

MASQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNIFIKSSIEMARAGEFDGLDLQWLYPSYGANSWRLFCHNLDDDRVKFMTLDDKDPHSSSIRHFYPFIYFYFVVV

Homology

[Close]

BLAST of Sed0001679 vs. NCBI nr
Match: KAG6599362.1 (Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599364.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 81/121 (66.94%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPSQ ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSDTYQVTIDPSQLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNPEVKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPEVKTLLSIAADAALFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. NCBI nr
Match: KAG7030350.1 (Chitotriosidase-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-32
Identity = 80/121 (66.12%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPS  ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSDTYQVTIDPSHLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNPEVKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPEVKTLLSIAADAALFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. NCBI nr
Match: XP_022946077.1 (acidic mammalian chitinase-like [Cucurbita moschata] >XP_022946671.1 acidic mammalian chitinase-like [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-32
Identity = 80/121 (66.12%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S TYQVT+DPSQ ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSGTYQVTVDPSQLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNPEVKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPEVKTLLSIAADAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. NCBI nr
Match: KAG6599434.1 (Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-32
Identity = 80/121 (66.12%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPS  ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSDTYQVTIDPSHLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNPEVKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPEVKTLLSIAADAALFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. NCBI nr
Match: KAG6599437.1 (Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-32
Identity = 80/121 (66.12%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPS  ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSDTYQVTIDPSHLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNPEVKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPEVKTLLSIAADAALFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. ExPASy Swiss-Prot
Match: O81862 (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 51/124 (41.13%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           S   T+V A YW   +    PV +ID+SLFTHLF  +A + S+T QVT+  +       F
Sbjct: 22  SMAQTVVKASYWFPASE--FPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTF 81

Query: 63  SSIVKQSNPEVKTLLSIAAG-----------------NIFIKSSIEMARAGEFDGLDLQW 110
           +  V++ NP VKTLLSI  G                   FI SSI +AR+  F GLDL W
Sbjct: 82  TQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDW 141

[Close]

BLAST of Sed0001679 vs. ExPASy Swiss-Prot
Match: A0A072UR65 (Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 2   ASQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQ 61
           +S + T V   YWL   N   P   +D SLFTH+F  +    + TY++ I  SQ + +  
Sbjct: 28  SSSSITRVKGIYWL--ENPFFPPTTVDTSLFTHIFYSFLTPNNITYKLEISSSQILSLNT 87

Query: 62  FSSIVKQSNPEVKTLLSI-AAGN----------------IFIKSSIEMARAGEFDGLDLQ 109
           F+   K  +P   TL SI  AG+                 FI S+I++AR   FDG+DL 
Sbjct: 88  FTKTFKTKSPPAATLFSIGGAGSNSSLLAFIASDPPACAAFINSTIDVARTFGFDGIDLD 147

[Close]

BLAST of Sed0001679 vs. ExPASy Swiss-Prot
Match: U5N4E3 (Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 38/126 (30.16%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 5   TTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIG---- 64
           +TT V   YW+   N   P ++ID SLFTH+F  +      TY++  +      +     
Sbjct: 33  STTRVKGIYWI--ENPLFPPSSIDTSLFTHIFYAFVSPNKFTYKLEEEEEDSTTVATSLT 92

Query: 65  QFSSIVKQSNPEVKTLLSI-----------------AAGNIFIKSSIEMARAGEFDGLDL 110
            F++  K   P + TLLSI                  A   FI S+I++AR   FDG+D 
Sbjct: 93  TFTNTFKTKTPPIPTLLSIGGATSNSTLFAFIASDPTARATFINSTIQVARTFGFDGIDF 152

[Close]

BLAST of Sed0001679 vs. ExPASy Swiss-Prot
Match: A0A072VEP0 (Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-07
Identity = 40/118 (33.90%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 9   VNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQ-FSSIVK 68
           V + YW A   D    + ID + FTH+ + +      ++++ I  S  I  GQ F   ++
Sbjct: 40  VRSAYWPA--GDDFSPSLIDTNYFTHILLAFIQPEPISFKLEITKS-GIKWGQNFIKALR 99

Query: 69  QSNPEVKTLLSIAAG-----------------NIFIKSSIEMARAGEFDGLDLQWLYP 109
             +P VKTLLSI  G                  IFI S+IE+AR   FDG+DL W +P
Sbjct: 100 HRSPPVKTLLSIGGGGSNSTLFSEIASTKQNREIFINSTIEVARKYRFDGVDLDWEFP 154

[Close]

BLAST of Sed0001679 vs. ExPASy Swiss-Prot
Match: Q15782 (Chitinase-3-like protein 2 OS=Homo sapiens OX=9606 GN=CHI3L2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-06
Identity = 38/129 (29.46%), Postives = 57/129 (44.19%), Query Frame = 0


Query: 26  NIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNI- 85
           NID  L +HL   +A +  E  +V I    ++++ Q  + +K  NP++K LLSI      
Sbjct: 50  NIDPFLCSHLIYSFASI--ENNKVIIKDKSEVMLYQTINSLKTKNPKLKILLSIGGYLFG 109

Query: 86  ----------------FIKSSIEMARAGEFDGLDLQWLYPSYGANS-WRLFCHNLDDDRV 137
                           FI S I   R   FDGLD+ W+YP    N+ + +  H L +   
Sbjct: 110 SKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQKENTHFTVLIHELAEAFQ 169

[Close]

BLAST of Sed0001679 vs. ExPASy TrEMBL
Match: A0A6J1G2P4 (acidic mammalian chitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111450275 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.1e-32
Identity = 80/121 (66.12%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S TYQVT+DPSQ ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDDRLPAANIDATLFTHLFAGYAQLNSGTYQVTVDPSQLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNPEVKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPEVKTLLSIAADAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. ExPASy TrEMBL
Match: A0A6J1KB82 (chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493904 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 6.0e-32
Identity = 78/121 (64.46%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+ TLP ANIDA+LFTHLF GYA + S+TYQVT+DPSQ ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNP+VKTLLSIA                + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPDVKTLLSIAGDAAVFAAMAADPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. ExPASy TrEMBL
Match: A0A6J1KFT3 (chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493907 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.7e-31
Identity = 78/121 (64.46%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+T+ TLP ANIDA+LFTHLF GYA + S+TYQVT+DPSQ ILI QF
Sbjct: 5   ANVTEFVNAGYWLASTDGTLPAANIDATLFTHLFAGYAQLNSDTYQVTVDPSQLILIDQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 110
           SS VK SNP VKTLLSIA                + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPGVKTLLSIAGDAAVFAAMAVDPTNRDAFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. ExPASy TrEMBL
Match: A0A6J1G4H5 (chitotriosidase-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450666 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.1e-31
Identity = 80/135 (59.26%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           +  T  VNAGYWLA+TND L  ANIDA+LFTHLFVGYA +  +T+QVT+DPSQ ILI QF
Sbjct: 5   ANVTKFVNAGYWLASTNDRLLAANIDATLFTHLFVGYALLDPKTHQVTVDPSQLILINQF 64

Query: 63  SSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYP 122
           SS VK SNP+VKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYP
Sbjct: 65  SSTVKLSNPDVKTLLSIAADAAVFAAMAASPTNRDDFIKSSIAAARGGGFDGLDLQWLYP 124

[Close]

BLAST of Sed0001679 vs. ExPASy TrEMBL
Match: A0A6J1G4J9 (acidic mammalian chitinase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450666 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30
Identity = 79/129 (61.24%), Postives = 91/129 (70.54%), Query Frame = 0


Query: 9   VNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQ 68
           VNAGYWLA T+DTL  ANIDA+LFTHLFVGYA +  +T+QVT+DPSQ ILI QFSS VK 
Sbjct: 5   VNAGYWLAGTDDTLLAANIDATLFTHLFVGYALLDPKTHQVTVDPSQLILINQFSSTVKL 64

Query: 69  SNPEVKTLLSIAAG--------------NIFIKSSIEMARAGEFDGLDLQWLYPS--YGA 122
           SNP+VKTLLSIAA               + FIKSSI  AR G FDGLDLQWLYPS  Y  
Sbjct: 65  SNPDVKTLLSIAADAAVFAAMAASPTNRDDFIKSSIAAARGGGFDGLDLQWLYPSSQYEM 124

[Close]

BLAST of Sed0001679 vs. TAIR 10
Match: AT4G19750.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 88.2 bits (217), Expect = 6.4e-18
Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 4   QTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFS 63
           +T ++V A YW+    +  P  NID++ FTHLF  +A V S T++VTI  +    +  F+
Sbjct: 9   RTNSIVKASYWVVKPENDFPAGNIDSTRFTHLFCAFADVDSSTHEVTISAANSCQVSSFT 68

Query: 64  SIVKQSNPEVKTLLSIA------------AGN-----IFIKSSIEMARAGEFDGLDLQWL 110
             VK  N +V+TLLSI             A N      FI SSI++AR  +F GLDL W 
Sbjct: 69  HTVKDKNTDVQTLLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128

[Close]

BLAST of Sed0001679 vs. TAIR 10
Match: AT4G19810.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 51/124 (41.13%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           S   T+V A YW   +    PV +ID+SLFTHLF  +A + S+T QVT+  +       F
Sbjct: 22  SMAQTVVKASYWFPASE--FPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTF 81

Query: 63  SSIVKQSNPEVKTLLSIAAG-----------------NIFIKSSIEMARAGEFDGLDLQW 110
           +  V++ NP VKTLLSI  G                   FI SSI +AR+  F GLDL W
Sbjct: 82  TQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDW 141

[Close]

BLAST of Sed0001679 vs. TAIR 10
Match: AT4G19820.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 3   SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQF 62
           S   T+V A YW A +    P+A ID+SLFTHLF  +A + + TYQV +          F
Sbjct: 20  SSAQTVVKATYWFAESES--PLAQIDSSLFTHLFCAFADINTLTYQVIVSSRNKPKFSTF 79

Query: 63  SSIVKQSNPEVKTLLSI-----------------AAGNIFIKSSIEMARAGEFDGLDLQW 110
           +  V++ NP VKTLLSI                  +  +FI SSI++AR+  F GLDL W
Sbjct: 80  TQTVRRRNPTVKTLLSIGGDFTYNFAFASMASNPTSRKLFISSSIKLARSCGFHGLDLNW 139

[Close]

BLAST of Sed0001679 vs. TAIR 10
Match: AT4G19800.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 48/118 (40.68%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 8   LVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVK 67
           +V A YW   T+   P  +ID+SLFTHLF  +A + +E+Y++TI          F+  V+
Sbjct: 6   VVKASYWFPATD--FPATDIDSSLFTHLFCTFADLEAESYEITIATWNQAPFHAFTETVQ 65

Query: 68  QSNPEVKTLLSIAAGNI-----------------FIKSSIEMARAGEFDGLDLQWLYP 109
           Q NP VKTLLSI  GN                  FI+S+I +AR+  F GLDL W YP
Sbjct: 66  QRNPHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYP 121

[Close]

BLAST of Sed0001679 vs. TAIR 10
Match: AT4G19760.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-15
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 4   QTTTLVNAGYWLAN--------TNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQ 63
           +T ++V A YW  +         +   P + ID++LFTHLF  +A V S T++VTI  + 
Sbjct: 9   RTNSIVKASYWFPDGKSQSPECLSQGTPSSFIDSTLFTHLFCAFADVDSSTHEVTISAAN 68

Query: 64  DILIGQFSSIVKQSNPEVKTLLSIA------------AGN-----IFIKSSIEMARAGEF 110
                 F+  VK+ N +V+TLLSI             A N      FI SSI++AR  +F
Sbjct: 69  SYQFSSFTETVKEKNTDVQTLLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIARKKDF 128

The following BLAST results are available for this feature:

BLAST of Sed0001679 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599362.1	1.1e-32	66.94	Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599364.1...	[more]
KAG7030350.1	4.3e-32	66.12	Chitotriosidase-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022946077.1	4.3e-32	66.12	acidic mammalian chitinase-like [Cucurbita moschata] >XP_022946671.1 acidic mamm...	[more]
KAG6599434.1	4.3e-32	66.12	Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6599437.1	4.3e-32	66.12	Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0001679 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81862	2.6e-16	41.13	Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1	[more]
A0A072UR65	2.8e-10	33.87	Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1	[more]
U5N4E3	3.4e-08	30.16	Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2	[more]
A0A072VEP0	4.9e-07	33.90	Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1	[more]
Q15782	4.2e-06	29.46	Chitinase-3-like protein 2 OS=Homo sapiens OX=9606 GN=CHI3L2 PE=1 SV=1	[more]

BLAST of Sed0001679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2P4	2.1e-32	66.12	acidic mammalian chitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111450275 PE...	[more]
A0A6J1KB82	6.0e-32	64.46	chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493904 PE=4 SV=1	[more]
A0A6J1KFT3	1.7e-31	64.46	chitotriosidase-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493907 PE=4 SV=1	[more]
A0A6J1G4H5	5.1e-31	59.26	chitotriosidase-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450666 ...	[more]
A0A6J1G4J9	1.5e-30	61.24	acidic mammalian chitinase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Sed0001679 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19750.1	6.4e-18	39.84	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19810.1	1.9e-17	41.13	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19820.1	1.9e-17	40.32	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19800.1	2.0e-16	40.68	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19760.1	6.6e-15	37.40	Glycosyl hydrolase family protein with chitinase insertion domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 11..115 e-value: 2.5E-12 score: 47.2
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 8..156 score: 11.981636
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 7..138 e-value: 1.3E-20 score: 75.8
None	No IPR available	PANTHER	PTHR11177:SF369	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE	coord: 3..113
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 3..113
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 11..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001679.1	Sed0001679.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process