Sed0001585 (gene) Chayote v1

Overview


Name	Sed0001585
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG07: 3439987 .. 3440509 (-)
RNA-Seq Expression	Sed0001585
Synteny	Sed0001585

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGTAAAAAAGATGAGGAAAGTGAAAAAGTTGTTGCCGAAACTGAGGTAGCTGAAAAAGATGTGGTCCAACCTGAGGTATTAAAAATTAGGTAATGTATTAATATATTAAGGAATGTATTAACTATTTATGTAAAGCAGGAAAAGCAACAAGAGAAAGGTGTTGCGCAAGCTGAGGAGGATGAAGAGGTATTAACAAATACATGAATTTGTTAATTAATTTCAACATGTTGCATTCTAACTATCTGCTTATGTAATGCAGAGTAAAAAAGATGAAGAAAGTGAAAAAGTTGTTGCCGAAACTAAGGTAGCTGAAAAAGATGTGGTCCAACCTGAGGTATTAAAAATTAGGTAATGTATTAATGTATTAAGTAATGTATTAACTATTTATGTAATACAGGAAAAGCAACAAGAGGAAGGTTTTGTGCAAGATGATGAAGGTGAAGAAATTATTGCCCAACCTATGGGAGTTGAAAAGGATATGGGCGAACCAGAGGTATTAAAGTTACACATTTCATGA

mRNA sequence

ATGCAGAGTAAAAAAGATGAGGAAAGTGAAAAAGTTGTTGCCGAAACTGAGGTAGCTGAAAAAGATGTGGTCCAACCTGAGGAAAAGCAACAAGAGAAAGGTGTTGCGCAAGCTGAGGAGGATGAAGAGAGTAAAAAAGATGAAGAAAGTGAAAAAGTTGTTGCCGAAACTAAGGTAGCTGAAAAAGATGTGGTCCAACCTGAGGAAAAGCAACAAGAGGAAGGTTTTGTGCAAGATGATGAAGGTGAAGAAATTATTGCCCAACCTATGGGAGTTGAAAAGGATATGGGCGAACCAGAGGTATTAAAGTTACACATTTCATGA

Coding sequence (CDS)

ATGCAGAGTAAAAAAGATGAGGAAAGTGAAAAAGTTGTTGCCGAAACTGAGGTAGCTGAAAAAGATGTGGTCCAACCTGAGGAAAAGCAACAAGAGAAAGGTGTTGCGCAAGCTGAGGAGGATGAAGAGAGTAAAAAAGATGAAGAAAGTGAAAAAGTTGTTGCCGAAACTAAGGTAGCTGAAAAAGATGTGGTCCAACCTGAGGAAAAGCAACAAGAGGAAGGTTTTGTGCAAGATGATGAAGGTGAAGAAATTATTGCCCAACCTATGGGAGTTGAAAAGGATATGGGCGAACCAGAGGTATTAAAGTTACACATTTCATGA

Protein sequence

MQSKKDEESEKVVAETEVAEKDVVQPEEKQQEKGVAQAEEDEESKKDEESEKVVAETKVAEKDVVQPEEKQQEEGFVQDDEGEEIIAQPMGVEKDMGEPEVLKLHIS

Homology

The following BLAST results are available for this feature:

BLAST of Sed0001585 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0001585 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0001585 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0001585 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001585.1	Sed0001585.1	mRNA