Homology
BLAST of Sed0001580 vs. NCBI nr
Match:
KAG7026300.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1036.9 bits (2680), Expect = 6.6e-299
Identity = 510/605 (84.30%), Postives = 549/605 (90.74%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKR+LPFAL N+R QT ENLS HLR+C DL+SSTS HSIALKLGFLNQT+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
NHLINCYVR VA A QLFDEMP NVVSWTSLMAGY++DG+PSIALSLFGAMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDDGQPSIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLRDGEK HA +E+ GYGGNVVVCSSLIDMYGKCNDVIRAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSMSCKNIVSW+SMIAAYAQNAHGD+A+++FREF S ++E PNHFM ASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+H AAIRLGCDSNDVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTSMI
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYGLGRQSL+LFEEMVRKGLKPNH+TFVGVLHACSHSGL DEGL YLTSMYEKHGI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMP-DDEALLWGALLSASRFHGRVDIAAE 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ MP DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSY 480
AC+RL+D+NRQVAGAYVTLSNAYASAGDM+ A RLRVEMKHSGVYKEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSER 540
VFYAGD+ SCPR D VL LREL+RK KDRGY+R GSKGLVFVD+EEEAEEEKVWLHSER
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSR-GSKGLVFVDIEEEAEEEKVWLHSER 540
Query: 541 LALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCT 600
LALGF LISIP+GLTIRIMKNLRMC DCHEAFKLISEIVERDFVVRDINRFHHFK+G CT
Sbjct: 541 LALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDINRFHHFKTGYCT 596
Query: 601 CNDFW 605
CNDFW
Sbjct: 601 CNDFW 596
BLAST of Sed0001580 vs. NCBI nr
Match:
XP_022138437.1 (pentatricopeptide repeat-containing protein At4g15720 [Momordica charantia])
HSP 1 Score: 1036.6 bits (2679), Expect = 8.7e-299
Identity = 502/604 (83.11%), Postives = 549/604 (90.89%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLK N+ FALT P LSR+N+R FQT N SRHLRNCNDL+S+TSAH IALKLGFL QT+
Sbjct: 1 MLKPNIHFALTRPRLSRENERLSFQTIANFSRHLRNCNDLISATSAHPIALKLGFLTQTL 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
P+NHLINCYVRL V+ A LFDEMP PNVVSWTSLMAGYI+ +PS ALSLFG MSRS
Sbjct: 61 PVNHLINCYVRLRRVSIAHHLFDEMPTPNVVSWTSLMAGYIDACQPSTALSLFGEMSRSP 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLR+G+K HAYVE+ GYGGNVVVCSSLIDMYGKCNDV+RAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLREGKKFHAYVEISGYGGNVVVCSSLIDMYGKCNDVVRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSM+CKNIVSW+SMIA YAQNAHGD+A+++FREFSSLN+EHPNHFM AS ISACASL
Sbjct: 181 RVFDSMACKNIVSWTSMIATYAQNAHGDDALKLFREFSSLNYEHPNHFMLASAISACASL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLVLG+V+HGA IRLG DSNDV++SVLVDMYAKCGSL SDKVF+RI NPSVIPYTSMI
Sbjct: 241 GRLVLGRVVHGAVIRLGHDSNDVISSVLVDMYAKCGSLNCSDKVFSRILNPSVIPYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS AKYGLGRQSLQLFEEMVRKGLKPNH+TFVGVL+ACSHSGL DEGL YLTSMYE+HGI
Sbjct: 301 VSRAKYGLGRQSLQLFEEMVRKGLKPNHVTFVGVLYACSHSGLLDEGLSYLTSMYERHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEA 420
MPE+KHYTCVVDMLAR GQLD+AYQLAKSMEV PDDEALLWGALLSASR+HGRVDIA EA
Sbjct: 361 MPESKHYTCVVDMLARVGQLDRAYQLAKSMEVEPDDEALLWGALLSASRYHGRVDIAVEA 420
Query: 421 CRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYV 480
C+RL++SN+QVAGAYVTLSNAYASAGDM+ AHRLRVEMKH+G+ KEPGCSWLEIK+ +YV
Sbjct: 421 CQRLVNSNQQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGINKEPGCSWLEIKNLTYV 480
Query: 481 FYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERL 540
FYAGD+ SCP S VL LREL+RK KDRGY R GSKGLVFVDVEEEAEEE V LHSERL
Sbjct: 481 FYAGDVESCPHSKEVLCLLRELERKMKDRGYGR-GSKGLVFVDVEEEAEEEAVGLHSERL 540
Query: 541 ALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTC 600
ALGFGLISIPKG+TIRIMKNLRMC DCHEAFKLISEIVERDFVVRD+NRFHHF GCCTC
Sbjct: 541 ALGFGLISIPKGITIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFTGGCCTC 600
Query: 601 NDFW 605
NDFW
Sbjct: 601 NDFW 603
BLAST of Sed0001580 vs. NCBI nr
Match:
XP_004143199.1 (pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus] >KGN47194.1 hypothetical protein Csa_021072 [Cucumis sativus])
HSP 1 Score: 1036.6 bits (2679), Expect = 8.7e-299
Identity = 501/604 (82.95%), Postives = 552/604 (91.39%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKRNL FALT P LSR+N+R F QT ENLSRHLRNCNDL+SS S HSIALKLGFLN TV
Sbjct: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
+NHLINCYVR +A A QLFDEMP+PNVVSWTSLMAGY+++G+PS AL LFG M RS
Sbjct: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLR GE HA+VE+ GYGGN+VVCSSLIDMYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
VF+SMSCKNIVSW+SMIAAYAQNAHGDEA++VFREF+SL+ EHPN +M ASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+HGAAI LGCDS++VVASVLVDMYAKCGSL+YSDKVFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYG GR+SLQLFEEMVRKGLKPNHIT VGVLHACSHSGL +EGL YLTSMYEK+GI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEA 420
MPETKHYTCVVDMLAR G+LDKA+ LAKSM+V PDD+ALLWGALLSASR HGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYV 480
C++L++SNRQVAGAYVTLSN YASAGDM+ AH+LRVEMK +GV+KEPGCSW+EIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERL 540
FYAG+ITSCPR D VL LREL +K KDRGY R G KGLVFVD+EEEAEEEKVWLHSERL
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVR-GRKGLVFVDIEEEAEEEKVWLHSERL 540
Query: 541 ALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTC 600
ALGFGLISIPKGLTIRIMKNLRMC DCHEAFKLISEI+ER+FVVRDINRFHHFK+GCCTC
Sbjct: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTC 600
Query: 601 NDFW 605
N FW
Sbjct: 601 NGFW 603
BLAST of Sed0001580 vs. NCBI nr
Match:
KAG6593959.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1035.0 bits (2675), Expect = 2.5e-298
Identity = 509/605 (84.13%), Postives = 548/605 (90.58%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKR+LPFAL N+R QT ENLS HLR+C DL+SSTS HSIALKLGFLNQT+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
NHLINCYVR VA A QLFDEMP NVVSWTSLMAGY++DG+PSIALSLFGAMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDDGQPSIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLRDGEK HA +E+ GYGGNVVVCSSLIDMYGKCNDVIRAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSMSCKNIVSW+SMIAAYAQNAHGD+A+++FREF S ++E PNHFM ASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+H AAIRLGCDSNDVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTSMI
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYGLGRQSL+LFEEMVRKGLKPNH+TFVGVLHACSHSGL DEGL YLTSMYEKHGI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMP-DDEALLWGALLSASRFHGRVDIAAE 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ MP DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSY 480
AC+RL+D+NRQVAGAYVTLSNAYASAGDM+ A RLRVEMKHSGVYKEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSER 540
VFYAGD+ SCPR D VL L EL+RK KDRGY+R GSKGLVFVD+EEEAEEEKVWLHSER
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLHELERKMKDRGYSR-GSKGLVFVDIEEEAEEEKVWLHSER 540
Query: 541 LALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCT 600
LALGF LISIP+GLTIRIMKNLRMC DCHEAFKLISEIVERDFVVRDINRFHHFK+G CT
Sbjct: 541 LALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDINRFHHFKTGYCT 596
Query: 601 CNDFW 605
CNDFW
Sbjct: 601 CNDFW 596
BLAST of Sed0001580 vs. NCBI nr
Match:
XP_022930461.1 (pentatricopeptide repeat-containing protein At4g15720 [Cucurbita moschata])
HSP 1 Score: 1033.9 bits (2672), Expect = 5.6e-298
Identity = 507/605 (83.80%), Postives = 549/605 (90.74%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKR+LPFAL N+R QT ENLS HLR+C DL+SSTS HSIALKLGFLNQT+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
NHLINCYVR VA A QLFDEMP NVVSWTSLMAGY+++G+PSIALSLFGAMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDNGQPSIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLRDGEK HA +E+ GYGGNVVVCSSLIDMYGKCNDVIRAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSMSCKNIVSW+SMIAAYAQNAHGD+A+++FREF S ++E PNHFM ASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+H AAIRLGCDSNDVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTSMI
Sbjct: 241 GRLVAGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYGLGRQSL+LFEEMVRKGLKPNH+TFVGVLHACSHSGL DEGL YLTSMYEKHGI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMP-DDEALLWGALLSASRFHGRVDIAAE 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ MP DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSY 480
AC+RL+D+NRQVAGAYVTLSNAYASAGDM+ A RLRVEMKHSGVYKEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSER 540
VFYAGD+ SCPR D VL LREL+RK KDRGY+R GSKGLVFVD+EEEAEEEKVWLHSER
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSR-GSKGLVFVDIEEEAEEEKVWLHSER 540
Query: 541 LALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCT 600
LALGF LISIP+GLTIR+MKNLRMC DCHEAFKLISEIVERDFVVRD+NRFHHFK+G CT
Sbjct: 541 LALGFCLISIPEGLTIRMMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCT 596
Query: 601 CNDFW 605
CNDFW
Sbjct: 601 CNDFW 596
BLAST of Sed0001580 vs. ExPASy Swiss-Prot
Match:
Q8VYH0 (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H1 PE=2 SV=1)
HSP 1 Score: 660.2 bits (1702), Expect = 2.2e-188
Identity = 338/612 (55.23%), Postives = 444/612 (72.55%), Query Frame = 0
Query: 4 RNLPFALTSPCLSRQNQRSFF--QTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTVP 63
+N+ A + Q + FF +T L L + + H++ LKLGF + T
Sbjct: 7 QNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFT 66
Query: 64 INHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRS-S 123
+NHL+ YV+L E+ AR+LFDEM +PNVVSWTS+++GY + G+P ALS+F M
Sbjct: 67 VNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRP 126
Query: 124 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 183
V PN++TFA+ KACS L+ R G+ +HA +E+ G N+VV SSL+DMYGKCNDV AR
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETAR 186
Query: 184 KVFDSM--SCKNIVSWSSMIAAYAQNAHGDEAVEVFREF-SSLNFEHPNHFMFASVISAC 243
+VFDSM +N+VSW+SMI AYAQNA G EA+E+FR F ++L + N FM ASVISAC
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISAC 246
Query: 244 ASLGRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYT 303
+SLGRL GKV HG R G +SN VVA+ L+DMYAKCGSL ++K+F RI SVI YT
Sbjct: 247 SSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYT 306
Query: 304 SMIVSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEK 363
SMI++ AK+GLG +++LF+EMV + PN++T +GVLHACSHSGL +EGL+YL+ M EK
Sbjct: 307 SMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEK 366
Query: 364 HGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIA 423
+G++P+++HYTCVVDML R G++D+AY+LAK++EV + ALLWGALLSA R HGRV+I
Sbjct: 367 YGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIV 426
Query: 424 AEACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDS 483
+EA +RLI SN+QV AY+ LSNAYA +G + + LR+EMK SG KE CSW+E KDS
Sbjct: 427 SEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDS 486
Query: 484 SYVFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGL-----VFVDVEEEAEEEK 543
YVF+AGD+ SC S + FL++L+++ K+RG+ RG S + VFVDV+EEA++E
Sbjct: 487 VYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTSSSVFVDVDEEAKDEM 546
Query: 544 VWLHSERLALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHH 603
V LH ERLAL +GL+ +P G TIRIM NLRMC DCHEAFKLISEIVER+ VVRD+NRFH
Sbjct: 547 VSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHC 606
Query: 604 FKSGCCTCNDFW 605
FK+G CTC D+W
Sbjct: 607 FKNGSCTCRDYW 616
BLAST of Sed0001580 vs. ExPASy Swiss-Prot
Match:
O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)
HSP 1 Score: 426.8 bits (1096), Expect = 4.1e-118
Identity = 216/543 (39.78%), Postives = 331/543 (60.96%), Query Frame = 0
Query: 63 NHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSR-SSV 122
N ++N Y +G + AR+LFDEM + + SWT+++ GY++ +P AL L+ M R +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 123 VPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRARK 182
PN FT + AV A + + +R G+++H ++ G + V+ SSL+DMYGKC + AR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 183 VFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASLG 242
+FD + K++VSW+SMI Y +++ E +F E + E PN + FA V++ACA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334
Query: 243 RLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMIV 302
LGK +HG R+G D +S LVDMY KCG++E + V + P ++ +TS+I
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394
Query: 303 SSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGIM 362
A+ G ++L+ F+ +++ G KP+H+TFV VL AC+H+GL ++GL++ S+ EKH +
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454
Query: 363 PETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEAC 422
+ HYTC+VD+LAR+G+ ++ + M + P LW ++L +G +D+A EA
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAA 514
Query: 423 RRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYVF 482
+ L + YVT++N YA+AG + ++R M+ GV K PG SW EIK +VF
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574
Query: 483 YAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERLA 542
A D TS P + ++ FLREL++K K+ GY S LV DVE+E +EE + HSE+LA
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPATS--LVLHDVEDEQKEENLVYHSEKLA 634
Query: 543 LGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTCN 602
+ F ++S +G I++ KNLR C DCH A K IS I +R VRD RFH F++G C+C
Sbjct: 635 VAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCG 691
Query: 603 DFW 605
D+W
Sbjct: 695 DYW 691
BLAST of Sed0001580 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 423.3 bits (1087), Expect = 4.6e-117
Identity = 222/565 (39.29%), Postives = 341/565 (60.35%), Query Frame = 0
Query: 40 LVSSTSAHSIALKLGFLNQTVPINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAG 99
L+ H+ L+ F + V N L+N Y + G + AR++F++MP + V+WT+L++G
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 100 YIEDGRPSIALSLFGAMSRSSVVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGN 159
Y + RP AL F M R PN+FT ++ +KA + G +LH + G+ N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 160 VVVCSSLIDMYGKCNDVIRARKVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSS 219
V V S+L+D+Y + + A+ VFD++ +N VSW+++IA +A+ + ++A+E+F+
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 220 LNFEHPNHFMFASVISACASLGRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLE 279
F P+HF +AS+ AC+S G L GK +H I+ G + L+DMYAK GS+
Sbjct: 256 DGF-RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 315
Query: 280 YSDKVFNRISNPSVIPYTSMIVSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACS 339
+ K+F+R++ V+ + S++ + A++G G++++ FEEM R G++PN I+F+ VL ACS
Sbjct: 316 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 375
Query: 340 HSGLSDEGLDYLTSMYEKHGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEAL 399
HSGL DEG Y M +K GI+PE HY VVD+L RAG L++A + + M + P A
Sbjct: 376 HSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP--TAA 435
Query: 400 LWGALLSASRFHGRVDIAAEACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMK 459
+W ALL+A R H ++ A A + + + G +V L N YAS G + A R+R +MK
Sbjct: 436 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 495
Query: 460 HSGVYKEPGCSWLEIKDSSYVFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGL 519
SGV KEP CSW+EI+++ ++F A D P+ + + E+ K K+ GY S +
Sbjct: 496 ESGVKKEPACSWVEIENAIHMFVAND-ERHPQREEIARKWEEVLAKIKELGYVPDTSHVI 555
Query: 520 VFVDVEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVE 579
V VD +E E + HSE++AL F L++ P G TI I KN+R+C DCH A KL S++V
Sbjct: 556 VHVDQQE--REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVG 615
Query: 580 RDFVVRDINRFHHFKSGCCTCNDFW 605
R+ +VRD NRFHHFK G C+C D+W
Sbjct: 616 REIIVRDTNRFHHFKDGNCSCKDYW 633
BLAST of Sed0001580 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 9.5e-115
Identity = 211/560 (37.68%), Postives = 331/560 (59.11%), Query Frame = 0
Query: 45 SAHSIALKLGFLNQTVPINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDG 104
+ HSI +K F + N L++ Y + G++ A+ +F EM D +VVS+TS++AGY +G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 105 RPSIALSLFGAMSRSSVVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCS 164
A+ LF M + P+ +T + C+ L +G+++H +++ G ++ V +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 165 SLIDMYGKCNDVIRARKVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEH 224
+L+DMY KC + A VF M K+I+SW+++I Y++N + +EA+ +F
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 225 PNHFMFASVISACASLGRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKV 284
P+ A V+ ACASL G+ +HG +R G S+ VA+ LVDMYAKCG+L + +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 285 FNRISNPSVIPYTSMIVSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLS 344
F+ I++ ++ +T MI +G G++++ LF +M + G++ + I+FV +L+ACSHSGL
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 345 DEGLDYLTSMYEKHGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGAL 404
DEG + M + I P +HY C+VDMLAR G L KAY+ ++M + PD A +WGAL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD--ATIWGAL 676
Query: 405 LSASRFHGRVDIAAEACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVY 464
L R H V +A + ++ + + G YV ++N YA A + RLR + G+
Sbjct: 677 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 736
Query: 465 KEPGCSWLEIKDSSYVFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDV 524
K PGCSW+EIK +F AGD +S P ++N+ FLR+++ + + GY+ L +D
Sbjct: 737 KNPGCSWIEIKGRVNIFVAGD-SSNPETENIEAFLRKVRARMIEEGYSPLTKYAL--IDA 796
Query: 525 EEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVV 584
EE +EE + HSE+LA+ G+IS G IR+ KNLR+C DCHE K +S++ R+ V+
Sbjct: 797 EEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVL 856
Query: 585 RDINRFHHFKSGCCTCNDFW 605
RD NRFH FK G C+C FW
Sbjct: 857 RDSNRFHQFKDGHCSCRGFW 871
BLAST of Sed0001580 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 414.1 bits (1063), Expect = 2.8e-114
Identity = 225/585 (38.46%), Postives = 334/585 (57.09%), Query Frame = 0
Query: 25 QTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTVPINHLINCYVRLGEVAFARQLFDE 84
QT+E L + + L + H L G LI Y LG V +AR++FD+
Sbjct: 78 QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK 137
Query: 85 MPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSSVVPNDFTFATAVKAC----SILSN 144
+ W +L G L L+ M+R V + FT+ +KAC +++
Sbjct: 138 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 197
Query: 145 LRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRARKVFDSMSCKNIVSWSSMIAA 204
L G+++HA++ GY +V + ++L+DMY + V A VF M +N+VSWS+MIA
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 205 YAQNAHGDEAVEVFRE-FSSLNFEHPNHFMFASVISACASLGRLVLGKVLHGAAIRLGCD 264
YA+N EA+ FRE PN SV+ ACASL L GK++HG +R G D
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 265 SNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMIVSSAKYGLGRQSLQLFEEM 324
S V S LV MY +CG LE +VF+R+ + V+ + S+I S +G G++++Q+FEEM
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 325 VRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGIMPETKHYTCVVDMLARAGQ 384
+ G P +TFV VL ACSH GL +EG +M+ HGI P+ +HY C+VD+L RA +
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Query: 385 LDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEACRRLIDSNRQVAGAYVTLS 444
LD+A ++ + M P + +WG+LL + R HG V++A A RRL + AG YV L+
Sbjct: 438 LDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLA 497
Query: 445 NAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYVFYAGDITSCPRSDNVLHFL 504
+ YA A D R++ ++H G+ K PG W+E++ Y F + D + P + + FL
Sbjct: 498 DIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN-PLMEQIHAFL 557
Query: 505 RELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMK 564
+L K++GY +KG+++ ++E E +E V HSE+LAL FGLI+ KG IRI K
Sbjct: 558 VKLAEDMKEKGYI-PQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 617
Query: 565 NLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTCNDFW 605
NLR+C DCH K IS+ +E++ +VRD+NRFH FK+G C+C D+W
Sbjct: 618 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Sed0001580 vs. ExPASy TrEMBL
Match:
A0A0A0KEC7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G197240 PE=3 SV=1)
HSP 1 Score: 1036.6 bits (2679), Expect = 4.2e-299
Identity = 501/604 (82.95%), Postives = 552/604 (91.39%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKRNL FALT P LSR+N+R F QT ENLSRHLRNCNDL+SS S HSIALKLGFLN TV
Sbjct: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
+NHLINCYVR +A A QLFDEMP+PNVVSWTSLMAGY+++G+PS AL LFG M RS
Sbjct: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLR GE HA+VE+ GYGGN+VVCSSLIDMYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
VF+SMSCKNIVSW+SMIAAYAQNAHGDEA++VFREF+SL+ EHPN +M ASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+HGAAI LGCDS++VVASVLVDMYAKCGSL+YSDKVFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYG GR+SLQLFEEMVRKGLKPNHIT VGVLHACSHSGL +EGL YLTSMYEK+GI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEA 420
MPETKHYTCVVDMLAR G+LDKA+ LAKSM+V PDD+ALLWGALLSASR HGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYV 480
C++L++SNRQVAGAYVTLSN YASAGDM+ AH+LRVEMK +GV+KEPGCSW+EIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERL 540
FYAG+ITSCPR D VL LREL +K KDRGY R G KGLVFVD+EEEAEEEKVWLHSERL
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVR-GRKGLVFVDIEEEAEEEKVWLHSERL 540
Query: 541 ALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTC 600
ALGFGLISIPKGLTIRIMKNLRMC DCHEAFKLISEI+ER+FVVRDINRFHHFK+GCCTC
Sbjct: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTC 600
Query: 601 NDFW 605
N FW
Sbjct: 601 NGFW 603
BLAST of Sed0001580 vs. ExPASy TrEMBL
Match:
A0A6J1CB36 (pentatricopeptide repeat-containing protein At4g15720 OS=Momordica charantia OX=3673 GN=LOC111009611 PE=3 SV=1)
HSP 1 Score: 1036.6 bits (2679), Expect = 4.2e-299
Identity = 502/604 (83.11%), Postives = 549/604 (90.89%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLK N+ FALT P LSR+N+R FQT N SRHLRNCNDL+S+TSAH IALKLGFL QT+
Sbjct: 1 MLKPNIHFALTRPRLSRENERLSFQTIANFSRHLRNCNDLISATSAHPIALKLGFLTQTL 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
P+NHLINCYVRL V+ A LFDEMP PNVVSWTSLMAGYI+ +PS ALSLFG MSRS
Sbjct: 61 PVNHLINCYVRLRRVSIAHHLFDEMPTPNVVSWTSLMAGYIDACQPSTALSLFGEMSRSP 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLR+G+K HAYVE+ GYGGNVVVCSSLIDMYGKCNDV+RAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLREGKKFHAYVEISGYGGNVVVCSSLIDMYGKCNDVVRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSM+CKNIVSW+SMIA YAQNAHGD+A+++FREFSSLN+EHPNHFM AS ISACASL
Sbjct: 181 RVFDSMACKNIVSWTSMIATYAQNAHGDDALKLFREFSSLNYEHPNHFMLASAISACASL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLVLG+V+HGA IRLG DSNDV++SVLVDMYAKCGSL SDKVF+RI NPSVIPYTSMI
Sbjct: 241 GRLVLGRVVHGAVIRLGHDSNDVISSVLVDMYAKCGSLNCSDKVFSRILNPSVIPYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS AKYGLGRQSLQLFEEMVRKGLKPNH+TFVGVL+ACSHSGL DEGL YLTSMYE+HGI
Sbjct: 301 VSRAKYGLGRQSLQLFEEMVRKGLKPNHVTFVGVLYACSHSGLLDEGLSYLTSMYERHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEA 420
MPE+KHYTCVVDMLAR GQLD+AYQLAKSMEV PDDEALLWGALLSASR+HGRVDIA EA
Sbjct: 361 MPESKHYTCVVDMLARVGQLDRAYQLAKSMEVEPDDEALLWGALLSASRYHGRVDIAVEA 420
Query: 421 CRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYV 480
C+RL++SN+QVAGAYVTLSNAYASAGDM+ AHRLRVEMKH+G+ KEPGCSWLEIK+ +YV
Sbjct: 421 CQRLVNSNQQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGINKEPGCSWLEIKNLTYV 480
Query: 481 FYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERL 540
FYAGD+ SCP S VL LREL+RK KDRGY R GSKGLVFVDVEEEAEEE V LHSERL
Sbjct: 481 FYAGDVESCPHSKEVLCLLRELERKMKDRGYGR-GSKGLVFVDVEEEAEEEAVGLHSERL 540
Query: 541 ALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTC 600
ALGFGLISIPKG+TIRIMKNLRMC DCHEAFKLISEIVERDFVVRD+NRFHHF GCCTC
Sbjct: 541 ALGFGLISIPKGITIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFTGGCCTC 600
Query: 601 NDFW 605
NDFW
Sbjct: 601 NDFW 603
BLAST of Sed0001580 vs. ExPASy TrEMBL
Match:
A0A6J1ER03 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita moschata OX=3662 GN=LOC111436901 PE=3 SV=1)
HSP 1 Score: 1033.9 bits (2672), Expect = 2.7e-298
Identity = 507/605 (83.80%), Postives = 549/605 (90.74%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKR+LPFAL N+R QT ENLS HLR+C DL+SSTS HSIALKLGFLNQT+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
NHLINCYVR VA A QLFDEMP NVVSWTSLMAGY+++G+PSIALSLFGAMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDNGQPSIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLRDGEK HA +E+ GYGGNVVVCSSLIDMYGKCNDVIRAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSMSCKNIVSW+SMIAAYAQNAHGD+A+++FREF S ++E PNHFM ASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+H AAIRLGCDSNDVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTSMI
Sbjct: 241 GRLVAGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYGLGRQSL+LFEEMVRKGLKPNH+TFVGVLHACSHSGL DEGL YLTSMYEKHGI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMP-DDEALLWGALLSASRFHGRVDIAAE 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ MP DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSY 480
AC+RL+D+NRQVAGAYVTLSNAYASAGDM+ A RLRVEMKHSGVYKEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSER 540
VFYAGD+ SCPR D VL LREL+RK KDRGY+R GSKGLVFVD+EEEAEEEKVWLHSER
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSR-GSKGLVFVDIEEEAEEEKVWLHSER 540
Query: 541 LALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCT 600
LALGF LISIP+GLTIR+MKNLRMC DCHEAFKLISEIVERDFVVRD+NRFHHFK+G CT
Sbjct: 541 LALGFCLISIPEGLTIRMMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCT 596
Query: 601 CNDFW 605
CNDFW
Sbjct: 601 CNDFW 596
BLAST of Sed0001580 vs. ExPASy TrEMBL
Match:
A0A6J1KGB2 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita maxima OX=3661 GN=LOC111494855 PE=3 SV=1)
HSP 1 Score: 1031.9 bits (2667), Expect = 1.0e-297
Identity = 506/605 (83.64%), Postives = 547/605 (90.41%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKR+LPFAL N+R QT ENLS HLR+C DLVSSTS HSIALKLGFLNQT+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLVSSTSIHSIALKLGFLNQTI 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
NHLINCYVR VA A QLFDEMP NVVSWTSLMAGY+ DG+P IALSLFGAMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVNDGQPCIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLRDGEK HA +E+ GYGGNVVVCSSLIDMYGKCN+VIRAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNNVIRAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
+VFDSMSCKNI+SW+SMIAAYAQNAH D+A+++FREF S ++EHPNHFM ASVISACA L
Sbjct: 181 RVFDSMSCKNIISWTSMIAAYAQNAHSDDALKLFREFGSSSWEHPNHFMLASVISACACL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+H AAIRLGCDSNDVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTSMI
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYGLGRQSL+LFEEMVRKGLKPNH+TFVGVLHACSHSGL DEGL YLTSMYEKHGI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMP-DDEALLWGALLSASRFHGRVDIAAE 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ MP DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSY 480
AC+RL+D+NRQVAGAYVTLSNAYASAGDM+ A RLRVEMKHSGVYKEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSER 540
VFYAGD+ SCPR + VLH LREL+RK K RGY+R GSKGLVFVD+EEEAEEEKVWLHSER
Sbjct: 481 VFYAGDVMSCPRGNEVLHLLRELERKMKGRGYSR-GSKGLVFVDIEEEAEEEKVWLHSER 540
Query: 541 LALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCT 600
LALGF LISIP+GLTIRIMKNLRMC DCHEAFKLISEIVERDFVVRD+NRFHHFK+G CT
Sbjct: 541 LALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCT 596
Query: 601 CNDFW 605
CNDFW
Sbjct: 601 CNDFW 596
BLAST of Sed0001580 vs. ExPASy TrEMBL
Match:
A0A1S3C8I5 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucumis melo OX=3656 GN=LOC103497869 PE=3 SV=1)
HSP 1 Score: 1025.0 bits (2649), Expect = 1.3e-295
Identity = 495/604 (81.95%), Postives = 551/604 (91.23%), Query Frame = 0
Query: 1 MLKRNLPFALTSPCLSRQNQRSFFQTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTV 60
MLKRNL FALT P LSR+N+R F QT ENLS HLRNCNDL+SS HSIALKLGFLN TV
Sbjct: 1 MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
Query: 61 PINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSS 120
+NHLINCYVR +A A +LFDEMP+PNVVSWTSLMAGY+++G+PS AL LFG M RS
Sbjct: 61 TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
Query: 121 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 180
VVPNDFTFATA+KACSILSNLR GE+ HA+VE+ GYG N+VVCSSLIDMYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 KVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASL 240
VF+SMSCKNIVSW+SMIAAYAQNAHGDEA++VFREF+SL+ E PN +M ASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
Query: 241 GRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMI 300
GRLV GKV+HGAAI LGCDS++VVASVLVDMYAKCGSL+YSD VFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
Query: 301 VSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGI 360
VS+AKYG GR+SLQLFEEMVRKGLKPNHIT +GVLHACSHSGL +EGL YLTSMYEK+GI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEA 420
MPETKHYTCVVDMLAR+G+LDKA+ +AKSM+V PDD+ALLWGALLSASR HGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYV 480
C++L++SNRQVAGAYVTLSNAYASAGDM+ AH+LRVEMKH+GV+KEPGCSW+EIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERL 540
FYAG+ITSCPR D VL LREL +K KDRGY R G KGLVFVD+EEEAEEEKVWLHSERL
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVR-GRKGLVFVDIEEEAEEEKVWLHSERL 540
Query: 541 ALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTC 600
ALGFGLISIPKGLTIRIMKNLRMC DCHEAFKLISEI+ER+FVVRDINRFHHF+SGCCTC
Sbjct: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTC 600
Query: 601 NDFW 605
N FW
Sbjct: 601 NGFW 603
BLAST of Sed0001580 vs. TAIR 10
Match:
AT4G15720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 660.2 bits (1702), Expect = 1.6e-189
Identity = 338/612 (55.23%), Postives = 444/612 (72.55%), Query Frame = 0
Query: 4 RNLPFALTSPCLSRQNQRSFF--QTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTVP 63
+N+ A + Q + FF +T L L + + H++ LKLGF + T
Sbjct: 7 QNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFT 66
Query: 64 INHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRS-S 123
+NHL+ YV+L E+ AR+LFDEM +PNVVSWTS+++GY + G+P ALS+F M
Sbjct: 67 VNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRP 126
Query: 124 VVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRAR 183
V PN++TFA+ KACS L+ R G+ +HA +E+ G N+VV SSL+DMYGKCNDV AR
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETAR 186
Query: 184 KVFDSM--SCKNIVSWSSMIAAYAQNAHGDEAVEVFREF-SSLNFEHPNHFMFASVISAC 243
+VFDSM +N+VSW+SMI AYAQNA G EA+E+FR F ++L + N FM ASVISAC
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISAC 246
Query: 244 ASLGRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYT 303
+SLGRL GKV HG R G +SN VVA+ L+DMYAKCGSL ++K+F RI SVI YT
Sbjct: 247 SSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYT 306
Query: 304 SMIVSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEK 363
SMI++ AK+GLG +++LF+EMV + PN++T +GVLHACSHSGL +EGL+YL+ M EK
Sbjct: 307 SMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEK 366
Query: 364 HGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIA 423
+G++P+++HYTCVVDML R G++D+AY+LAK++EV + ALLWGALLSA R HGRV+I
Sbjct: 367 YGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIV 426
Query: 424 AEACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDS 483
+EA +RLI SN+QV AY+ LSNAYA +G + + LR+EMK SG KE CSW+E KDS
Sbjct: 427 SEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDS 486
Query: 484 SYVFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGL-----VFVDVEEEAEEEK 543
YVF+AGD+ SC S + FL++L+++ K+RG+ RG S + VFVDV+EEA++E
Sbjct: 487 VYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTSSSVFVDVDEEAKDEM 546
Query: 544 VWLHSERLALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHH 603
V LH ERLAL +GL+ +P G TIRIM NLRMC DCHEAFKLISEIVER+ VVRD+NRFH
Sbjct: 547 VSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHC 606
Query: 604 FKSGCCTCNDFW 605
FK+G CTC D+W
Sbjct: 607 FKNGSCTCRDYW 616
BLAST of Sed0001580 vs. TAIR 10
Match:
AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 426.8 bits (1096), Expect = 2.9e-119
Identity = 216/543 (39.78%), Postives = 331/543 (60.96%), Query Frame = 0
Query: 63 NHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSR-SSV 122
N ++N Y +G + AR+LFDEM + + SWT+++ GY++ +P AL L+ M R +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 123 VPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRARK 182
PN FT + AV A + + +R G+++H ++ G + V+ SSL+DMYGKC + AR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 183 VFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASLG 242
+FD + K++VSW+SMI Y +++ E +F E + E PN + FA V++ACA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334
Query: 243 RLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMIV 302
LGK +HG R+G D +S LVDMY KCG++E + V + P ++ +TS+I
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394
Query: 303 SSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGIM 362
A+ G ++L+ F+ +++ G KP+H+TFV VL AC+H+GL ++GL++ S+ EKH +
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454
Query: 363 PETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEAC 422
+ HYTC+VD+LAR+G+ ++ + M + P LW ++L +G +D+A EA
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAA 514
Query: 423 RRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYVF 482
+ L + YVT++N YA+AG + ++R M+ GV K PG SW EIK +VF
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574
Query: 483 YAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERLA 542
A D TS P + ++ FLREL++K K+ GY S LV DVE+E +EE + HSE+LA
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPATS--LVLHDVEDEQKEENLVYHSEKLA 634
Query: 543 LGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTCN 602
+ F ++S +G I++ KNLR C DCH A K IS I +R VRD RFH F++G C+C
Sbjct: 635 VAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCG 691
Query: 603 DFW 605
D+W
Sbjct: 695 DYW 691
BLAST of Sed0001580 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 415.6 bits (1067), Expect = 6.7e-116
Identity = 211/560 (37.68%), Postives = 331/560 (59.11%), Query Frame = 0
Query: 45 SAHSIALKLGFLNQTVPINHLINCYVRLGEVAFARQLFDEMPDPNVVSWTSLMAGYIEDG 104
+ HSI +K F + N L++ Y + G++ A+ +F EM D +VVS+TS++AGY +G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 105 RPSIALSLFGAMSRSSVVPNDFTFATAVKACSILSNLRDGEKLHAYVEVLGYGGNVVVCS 164
A+ LF M + P+ +T + C+ L +G+++H +++ G ++ V +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 165 SLIDMYGKCNDVIRARKVFDSMSCKNIVSWSSMIAAYAQNAHGDEAVEVFREFSSLNFEH 224
+L+DMY KC + A VF M K+I+SW+++I Y++N + +EA+ +F
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 225 PNHFMFASVISACASLGRLVLGKVLHGAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDKV 284
P+ A V+ ACASL G+ +HG +R G S+ VA+ LVDMYAKCG+L + +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 285 FNRISNPSVIPYTSMIVSSAKYGLGRQSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLS 344
F+ I++ ++ +T MI +G G++++ LF +M + G++ + I+FV +L+ACSHSGL
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 345 DEGLDYLTSMYEKHGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVMPDDEALLWGAL 404
DEG + M + I P +HY C+VDMLAR G L KAY+ ++M + PD A +WGAL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD--ATIWGAL 676
Query: 405 LSASRFHGRVDIAAEACRRLIDSNRQVAGAYVTLSNAYASAGDMDMAHRLRVEMKHSGVY 464
L R H V +A + ++ + + G YV ++N YA A + RLR + G+
Sbjct: 677 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 736
Query: 465 KEPGCSWLEIKDSSYVFYAGDITSCPRSDNVLHFLRELKRKTKDRGYARGGSKGLVFVDV 524
K PGCSW+EIK +F AGD +S P ++N+ FLR+++ + + GY+ L +D
Sbjct: 737 KNPGCSWIEIKGRVNIFVAGD-SSNPETENIEAFLRKVRARMIEEGYSPLTKYAL--IDA 796
Query: 525 EEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCHDCHEAFKLISEIVERDFVV 584
EE +EE + HSE+LA+ G+IS G IR+ KNLR+C DCHE K +S++ R+ V+
Sbjct: 797 EEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVL 856
Query: 585 RDINRFHHFKSGCCTCNDFW 605
RD NRFH FK G C+C FW
Sbjct: 857 RDSNRFHQFKDGHCSCRGFW 871
BLAST of Sed0001580 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 414.1 bits (1063), Expect = 2.0e-115
Identity = 225/585 (38.46%), Postives = 334/585 (57.09%), Query Frame = 0
Query: 25 QTFENLSRHLRNCNDLVSSTSAHSIALKLGFLNQTVPINHLINCYVRLGEVAFARQLFDE 84
QT+E L + + L + H L G LI Y LG V +AR++FD+
Sbjct: 78 QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK 137
Query: 85 MPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSSVVPNDFTFATAVKAC----SILSN 144
+ W +L G L L+ M+R V + FT+ +KAC +++
Sbjct: 138 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 197
Query: 145 LRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRARKVFDSMSCKNIVSWSSMIAA 204
L G+++HA++ GY +V + ++L+DMY + V A VF M +N+VSWS+MIA
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 205 YAQNAHGDEAVEVFRE-FSSLNFEHPNHFMFASVISACASLGRLVLGKVLHGAAIRLGCD 264
YA+N EA+ FRE PN SV+ ACASL L GK++HG +R G D
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 265 SNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMIVSSAKYGLGRQSLQLFEEM 324
S V S LV MY +CG LE +VF+R+ + V+ + S+I S +G G++++Q+FEEM
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 325 VRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGIMPETKHYTCVVDMLARAGQ 384
+ G P +TFV VL ACSH GL +EG +M+ HGI P+ +HY C+VD+L RA +
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Query: 385 LDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEACRRLIDSNRQVAGAYVTLS 444
LD+A ++ + M P + +WG+LL + R HG V++A A RRL + AG YV L+
Sbjct: 438 LDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLA 497
Query: 445 NAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYVFYAGDITSCPRSDNVLHFL 504
+ YA A D R++ ++H G+ K PG W+E++ Y F + D + P + + FL
Sbjct: 498 DIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN-PLMEQIHAFL 557
Query: 505 RELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMK 564
+L K++GY +KG+++ ++E E +E V HSE+LAL FGLI+ KG IRI K
Sbjct: 558 VKLAEDMKEKGYI-PQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 617
Query: 565 NLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTCNDFW 605
NLR+C DCH K IS+ +E++ +VRD+NRFH FK+G C+C D+W
Sbjct: 618 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Sed0001580 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 411.4 bits (1056), Expect = 1.3e-114
Identity = 207/526 (39.35%), Postives = 322/526 (61.22%), Query Frame = 0
Query: 79 RQLFDEMPDPNVVSWTSLMAGYIEDGRPSIALSLFGAMSRSSVVPNDFTFATAVKACSIL 138
R++F+ MP +VVS+ +++AGY + G AL + M + + P+ FT ++ + S
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 139 SNLRDGEKLHAYVEVLGYGGNVVVCSSLIDMYGKCNDVIRARKVFDSMSCKNIVSWSSMI 198
++ G+++H YV G +V + SSL+DMY K + + +VF + C++ +SW+S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 199 AAYAQNAHGDEAVEVFREFSSLNFEHPNHFMFASVISACASLGRLVLGKVLHGAAIRLGC 258
A Y QN +EA+ +FR+ + + P F+SVI ACA L L LGK LHG +R G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVK-PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 375
Query: 259 DSNDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSMIVSSAKYGLGRQSLQLFEE 318
SN +AS LVDMY+KCG+++ + K+F+R++ + +T++I+ A +G G +++ LFEE
Sbjct: 376 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 435
Query: 319 MVRKGLKPNHITFVGVLHACSHSGLSDEGLDYLTSMYEKHGIMPETKHYTCVVDMLARAG 378
M R+G+KPN + FV VL ACSH GL DE Y SM + +G+ E +HY V D+L RAG
Sbjct: 436 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 495
Query: 379 QLDKAYQLAKSMEVMPDDEALLWGALLSASRFHGRVDIAAEACRRLIDSNRQVAGAYVTL 438
+L++AY M V P +W LLS+ H +++A + ++ + + GAYV +
Sbjct: 496 KLEEAYNFISKMCVEPTGS--VWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 555
Query: 439 SNAYASAGDMDMAHRLRVEMKHSGVYKEPGCSWLEIKDSSYVFYAGDITSCPRSDNVLHF 498
N YAS G +LR+ M+ G+ K+P CSW+E+K+ ++ F +GD S P D + F
Sbjct: 556 CNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD-RSHPSMDKINEF 615
Query: 499 LRELKRKTKDRGYARGGSKGLVFVDVEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIM 558
L+ + + + GY S V DV+EE + E ++ HSERLA+ FG+I+ G TIR+
Sbjct: 616 LKAVMEQMEKEGYVADTSG--VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 675
Query: 559 KNLRMCHDCHEAFKLISEIVERDFVVRDINRFHHFKSGCCTCNDFW 605
KN+R+C DCH A K IS+I ER+ +VRD +RFHHF G C+C D+W
Sbjct: 676 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7026300.1 | 6.6e-299 | 84.30 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022138437.1 | 8.7e-299 | 83.11 | pentatricopeptide repeat-containing protein At4g15720 [Momordica charantia] | [more] |
XP_004143199.1 | 8.7e-299 | 82.95 | pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus] >KGN4719... | [more] |
KAG6593959.1 | 2.5e-298 | 84.13 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022930461.1 | 5.6e-298 | 83.80 | pentatricopeptide repeat-containing protein At4g15720 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q8VYH0 | 2.2e-188 | 55.23 | Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana OX... | [more] |
O23169 | 4.1e-118 | 39.78 | Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX... | [more] |
Q9LIQ7 | 4.6e-117 | 39.29 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Q9SN39 | 9.5e-115 | 37.68 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9STF3 | 2.8e-114 | 38.46 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KEC7 | 4.2e-299 | 82.95 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1972... | [more] |
A0A6J1CB36 | 4.2e-299 | 83.11 | pentatricopeptide repeat-containing protein At4g15720 OS=Momordica charantia OX=... | [more] |
A0A6J1ER03 | 2.7e-298 | 83.80 | pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KGB2 | 1.0e-297 | 83.64 | pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita maxima OX=366... | [more] |
A0A1S3C8I5 | 1.3e-295 | 81.95 | pentatricopeptide repeat-containing protein At4g15720 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT4G15720.1 | 1.6e-189 | 55.23 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37170.1 | 2.9e-119 | 39.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18750.1 | 6.7e-116 | 37.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G46790.1 | 2.0e-115 | 38.46 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G23330.1 | 1.3e-114 | 39.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |