Sed0001560 (gene) Chayote v1

Overview


Name	Sed0001560
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein SHI RELATED SEQUENCE
Location	LG03: 11188167 .. 11189573 (+)
RNA-Seq Expression	Sed0001560
Synteny	Sed0001560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGGAGAGGGGTATTAGGTCAAAGAAATGGCTGGGTTCTTCTATCTAGGAGGAGGAGGAGGAGGGAGAGAAGGCCCACCAAACAAACAAGAACAGCAACATCAGCAGCAGCCAGAAGAAGGAGAAGAAGAAAGAGAACACAATTTGTTTTTGTATAGAAATGATCAAGATCTGTACAGCCACAACCACAACAACAAAGGCTTTGAGATATGGCCCCAACAATACAACCCAAACCCTTCTCCCCTCCCCAATCACCTCTCCTTCGGCGTCGGCCCCAGCCGTCGCAGCTTCCTCATCAACGACACCGATCACGACCCCTCCCGAACCGCCTTCTCCGTCTCCAGACCCGCCGCGTTCTCCTTGCCCGCGGGCGGCGTCAATTGCCAAGACTGCGGCAACCAATCCAAGAAGGATTGCGCCTATTTGAGATGCAGGACTTGCTGCAAGAGCCGGGGCTTTCACTGCCAGACCCACGTCAAGAGCACGTGGGTTCCCGCTGCCAAACGCCGTGAGCGCCAGCAACACATTGCCGCCCTTCAACAGCAGGATCTCAATTCCAAACGCCCCAGGGAATCCCAATCCGCTGTCGTTACCCTCCCTCCCCCTCCCGCCACCACCACCACCGCCATCCCCTCGGGTAACCGAATAAACCCCCCCCTCTCTACACCCATTCCCAAACAATATTTTATCACCAATTTCCCTAATCCAAACGCACCCTTGTTTTGTATCCTTCATCATCATCATCAATCAACTCTTGTTTTTTTGGTTTTCTTTCAAATCCAAACACTACTGTTTGTTAGTAAAAATGACGATAAAGTTGAGAGAAATTAGTTATATTTTCGAAAACTTTATTTTTCTGACATATTAATCACAATTATTTTGATTTTTTTTTTTAAATTTCTTATATTATTATTTTATTTTGGGTGTGATGATATTAGGGTTAGAACTGGCGCAATTTCCATCAGAAGTGAACTCAGCGGCAGTTTTTCGATGCGTCAAAGTAAGCGCAATGGACGATGCAGATGAAGAGTTTGCATATCAGACGGCCGTAAACATCGGAGGCCACGTCTTCAAAGGAATTCTCTACGATCAAGGTCCTGAAGTTTCTTACAACGCCGCCGGCGAGTCCTCCTCCGGCCACGGCGGCGACGGATCAACTCAGCCACTTAATTTAATTACAAGACACTCCGATGCCACCGTCGTGGCCTCCACCGCTCCGTTGCTCGATCCGTCGATTTATCCAGCTCCTCTCAATGCATTTATGGCTGGTACGCAGTTCTTCCCACCTCCAAGGTCATGAGAAAAGAAAAAACATAATCCCAAAAAAAAGATGGAAAATTTGCCCTAAATTATCTGTTCTTTTTTTTTTTTTGAAGAAGGTTAAGGGATTATAGAGATGAG

mRNA sequence

AGAGAGAGAGGAGAGGGGTATTAGGTCAAAGAAATGGCTGGGTTCTTCTATCTAGGAGGAGGAGGAGGAGGGAGAGAAGGCCCACCAAACAAACAAGAACAGCAACATCAGCAGCAGCCAGAAGAAGGAGAAGAAGAAAGAGAACACAATTTGTTTTTGTATAGAAATGATCAAGATCTGTACAGCCACAACCACAACAACAAAGGCTTTGAGATATGGCCCCAACAATACAACCCAAACCCTTCTCCCCTCCCCAATCACCTCTCCTTCGGCGTCGGCCCCAGCCGTCGCAGCTTCCTCATCAACGACACCGATCACGACCCCTCCCGAACCGCCTTCTCCGTCTCCAGACCCGCCGCGTTCTCCTTGCCCGCGGGCGGCGTCAATTGCCAAGACTGCGGCAACCAATCCAAGAAGGATTGCGCCTATTTGAGATGCAGGACTTGCTGCAAGAGCCGGGGCTTTCACTGCCAGACCCACGTCAAGAGCACGTGGGTTCCCGCTGCCAAACGCCGTGAGCGCCAGCAACACATTGCCGCCCTTCAACAGCAGGATCTCAATTCCAAACGCCCCAGGGAATCCCAATCCGCTGTCGTTACCCTCCCTCCCCCTCCCGCCACCACCACCACCGCCATCCCCTCGGGGTTAGAACTGGCGCAATTTCCATCAGAAGTGAACTCAGCGGCAGTTTTTCGATGCGTCAAAGTAAGCGCAATGGACGATGCAGATGAAGAGTTTGCATATCAGACGGCCGTAAACATCGGAGGCCACGTCTTCAAAGGAATTCTCTACGATCAAGGTCCTGAAGTTTCTTACAACGCCGCCGGCGAGTCCTCCTCCGGCCACGGCGGCGACGGATCAACTCAGCCACTTAATTTAATTACAAGACACTCCGATGCCACCGTCGTGGCCTCCACCGCTCCGTTGCTCGATCCGTCGATTTATCCAGCTCCTCTCAATGCATTTATGGCTGGTACGCAGTTCTTCCCACCTCCAAGGTCATGAGAAAAGAAAAAACATAATCCCAAAAAAAAGATGGAAAATTTGCCCTAAATTATCTGTTCTTTTTTTTTTTTTGAAGAAGGTTAAGGGATTATAGAGATGAG

Coding sequence (CDS)

ATGGCTGGGTTCTTCTATCTAGGAGGAGGAGGAGGAGGGAGAGAAGGCCCACCAAACAAACAAGAACAGCAACATCAGCAGCAGCCAGAAGAAGGAGAAGAAGAAAGAGAACACAATTTGTTTTTGTATAGAAATGATCAAGATCTGTACAGCCACAACCACAACAACAAAGGCTTTGAGATATGGCCCCAACAATACAACCCAAACCCTTCTCCCCTCCCCAATCACCTCTCCTTCGGCGTCGGCCCCAGCCGTCGCAGCTTCCTCATCAACGACACCGATCACGACCCCTCCCGAACCGCCTTCTCCGTCTCCAGACCCGCCGCGTTCTCCTTGCCCGCGGGCGGCGTCAATTGCCAAGACTGCGGCAACCAATCCAAGAAGGATTGCGCCTATTTGAGATGCAGGACTTGCTGCAAGAGCCGGGGCTTTCACTGCCAGACCCACGTCAAGAGCACGTGGGTTCCCGCTGCCAAACGCCGTGAGCGCCAGCAACACATTGCCGCCCTTCAACAGCAGGATCTCAATTCCAAACGCCCCAGGGAATCCCAATCCGCTGTCGTTACCCTCCCTCCCCCTCCCGCCACCACCACCACCGCCATCCCCTCGGGGTTAGAACTGGCGCAATTTCCATCAGAAGTGAACTCAGCGGCAGTTTTTCGATGCGTCAAAGTAAGCGCAATGGACGATGCAGATGAAGAGTTTGCATATCAGACGGCCGTAAACATCGGAGGCCACGTCTTCAAAGGAATTCTCTACGATCAAGGTCCTGAAGTTTCTTACAACGCCGCCGGCGAGTCCTCCTCCGGCCACGGCGGCGACGGATCAACTCAGCCACTTAATTTAATTACAAGACACTCCGATGCCACCGTCGTGGCCTCCACCGCTCCGTTGCTCGATCCGTCGATTTATCCAGCTCCTCTCAATGCATTTATGGCTGGTACGCAGTTCTTCCCACCTCCAAGGTCATGA

Protein sequence

MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFEIWPQQYNPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPAAFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAALQQQDLNSKRPRESQSAVVTLPPPPATTTTAIPSGLELAQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQPLNLITRHSDATVVASTAPLLDPSIYPAPLNAFMAGTQFFPPPRS

Homology

[Close]

BLAST of Sed0001560 vs. NCBI nr
Match: XP_008444770.1 (PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis melo])

HSP 1 Score: 447.2 bits (1149), Expect = 1.2e-121
Identity = 252/364 (69.23%), Postives = 269/364 (73.90%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQ        EE EEERE NLFLYRNDQ++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQ--------EEDEEEREQNLFLYRNDQEIY-----NKGFE 60

Query: 61  IWPQQYN---------PNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPAAFS 120
           IWPQQYN         PNPS LPNHLSFGVGPSRRSF+IND   +PSR+AF++ RPAA +
Sbjct: 61  IWPQQYNNNNNHQHQQPNPS-LPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAA 120

Query: 121 L--------PAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180
                     AGG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRER
Sbjct: 121 FAAAAASAATAGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 180

Query: 181 QQHIAALQQQDL--------NSKRPRESQSAVVTLPPPPATTTT-----AIPSGLELAQF 240
           QQ IAALQ Q          NSKR RE+Q+       P A+ +      +I SGLELAQF
Sbjct: 181 QQQIAALQHQQQQEQFRGGDNSKRLRETQTTTAVAAAPTASASACPRLPSITSGLELAQF 240

Query: 241 PSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSG 300
           PSEVNS AVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPE+ Y AAGESSSG
Sbjct: 241 PSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPELRYTAAGESSSG 300

Query: 301 HGGDGSTQPLNLITRHSDAT-----------VVASTAPLLDPSIYPAPLNAFMAGTQFFP 324
           HGGDGST PLNLIT  +  T             ASTAPLLDPSIYPAPLNAFMAGTQFFP
Sbjct: 301 HGGDGSTHPLNLITGPTSTTTSAATSTNPAAAAASTAPLLDPSIYPAPLNAFMAGTQFFP 347

[Close]

BLAST of Sed0001560 vs. NCBI nr
Match: XP_004152766.2 (LOW QUALITY PROTEIN: protein EXPRESSION OF TERPENOIDS 1 [Cucumis sativus])

HSP 1 Score: 444.9 bits (1143), Expect = 6.0e-121
Identity = 252/363 (69.42%), Postives = 269/363 (74.10%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQ        EE EEERE NLFLYRNDQ++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQ--------EEDEEEREQNLFLYRNDQEIY-----NKGFE 60

Query: 61  IWPQQYN---------PNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPAAFS 120
           IWPQQYN         PNPS LPNHLSFGVGPSRRSF+IND   +PSR+AF++ RPAA +
Sbjct: 61  IWPQQYNNNNNHQHQQPNPS-LPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAA 120

Query: 121 L--------PAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180
                     AGG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRER
Sbjct: 121 FAAAAASAATAGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 180

Query: 181 QQHIAALQQQDL--------NSKRPRESQSAVVTLPPPPATTT----TAIPSGLELAQFP 240
           QQ IAALQ Q          NSKR RE+Q+A      P + +      +I SGLELAQFP
Sbjct: 181 QQQIAALQHQQQQEQFRGGDNSKRLRETQTATAIAALPASASACPRLPSITSGLELAQFP 240

Query: 241 SEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGH 300
           SEVNS AVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPE+ Y AAGESSSGH
Sbjct: 241 SEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPELRYTAAGESSSGH 300

Query: 301 GGDGSTQPLNLI-----------TRHSDATVVASTAPLLDPSIYPAPLNAFMAGTQFFPP 324
           GGDGST PLNLI           T  + A   ASTAPLLDPSIYPAPLNAFMAGTQFFPP
Sbjct: 301 GGDGSTHPLNLIAGPTSTSTSAATSTNPAAASASTAPLLDPSIYPAPLNAFMAGTQFFPP 346

[Close]

BLAST of Sed0001560 vs. NCBI nr
Match: KAG7029415.1 (Protein SHI RELATED SEQUENCE 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-114
Identity = 247/355 (69.58%), Postives = 269/355 (75.77%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQE+         EEERE NLF+YRN +++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQEE---------EEEREQNLFMYRN-EEIY-----NKGFE 60

Query: 61  IWPQQY---NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRP-AAFSLPA-- 120
           IWPQQY   + NPS L +HLSFGVGPSRRSF+IND+D +PSR+AF+V RP AAF+  A  
Sbjct: 61  IWPQQYTNHHQNPS-LTDHLSFGVGPSRRSFMINDSD-EPSRSAFTVMRPAAAFAASAAA 120

Query: 121 ---GGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAALQ 180
              GG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQ IAALQ
Sbjct: 121 AAGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQ 180

Query: 181 QQDL--------NSKRPRESQ-SAVVTLPPPPATTTTAIP---SGLELAQFPSEVNSAAV 240
           QQ          NSKR RE+Q +  V+     AT    +P   SGLELAQFPSEVNS AV
Sbjct: 181 QQQQQEQFRGGENSKRQRETQITTAVSAATASATACPRLPSITSGLELAQFPSEVNSPAV 240

Query: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQP 300
           FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEV Y AAGESSSGHGGDGST P
Sbjct: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHP 300

Query: 301 LNLITRHSDA-----------TVVASTAPLLDPSIYPAPLNAFMAGTQFFPPPRS 324
           LNLI   S+A           +   S APLLDP+IYPAPLNAFMAGTQFFPP RS
Sbjct: 301 LNLIAGSSNAGPTSASTSAATSTNPSAAPLLDPTIYPAPLNAFMAGTQFFPPSRS 335

[Close]

BLAST of Sed0001560 vs. NCBI nr
Match: XP_022996783.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 423.7 bits (1088), Expect = 1.4e-114
Identity = 247/357 (69.19%), Postives = 270/357 (75.63%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQE+         EEERE NLF+YRN +++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQEE---------EEEREQNLFMYRN-EEIY-----NKGFE 60

Query: 61  IWPQQY---NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRP-AAFSLPA-- 120
           IWPQQY   + NPS L +HLSFGVGPSRRSF+IND+D +PSR+AF+V RP AAF+  A  
Sbjct: 61  IWPQQYTNHHQNPS-LTDHLSFGVGPSRRSFMINDSD-EPSRSAFTVMRPAAAFAASAAA 120

Query: 121 ----GGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAAL 180
               GG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQ IAAL
Sbjct: 121 AAAGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAAL 180

Query: 181 QQQDL--------NSKRPRESQ-SAVVTLPPPPATTTTAIP---SGLELAQFPSEVNSAA 240
           QQQ          NSKR RE+Q +  V+     AT    +P   SGLELAQFPSEVNS A
Sbjct: 181 QQQQQQEQFRGGENSKRQRETQITTTVSAATASATACPRLPSITSGLELAQFPSEVNSPA 240

Query: 241 VFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQ 300
           VFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEV Y AAGESSSGHGGDGST 
Sbjct: 241 VFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTH 300

Query: 301 PLNLITRHSDA------------TVVASTAPLLDPSIYPAPLNAFMAGTQFFPPPRS 324
           PLNLI   S+A            T  ++ APLLDP+IYPAPLNAFMAGTQFFPP RS
Sbjct: 301 PLNLIAGSSNAGPTSASTSAATSTNPSAAAPLLDPTIYPAPLNAFMAGTQFFPPSRS 337

[Close]

BLAST of Sed0001560 vs. NCBI nr
Match: XP_022962177.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata])

HSP 1 Score: 422.2 bits (1084), Expect = 4.1e-114
Identity = 248/357 (69.47%), Postives = 271/357 (75.91%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQE+         EEERE NLF+YRN +++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQEE---------EEEREQNLFMYRN-EEIY-----NKGFE 60

Query: 61  IWPQQY---NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRP-AAFSLPA-- 120
           IWPQQY   + NPS L +HLSFGVGPSRRSF+IND+D +PSR+AF+V RP AAF+  A  
Sbjct: 61  IWPQQYTNHHQNPS-LTDHLSFGVGPSRRSFMINDSD-EPSRSAFTVMRPAAAFAASAAA 120

Query: 121 ---GGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAALQ 180
              GG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQ IAALQ
Sbjct: 121 AAGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQ 180

Query: 181 QQDL--------NSKRPRESQ-SAVVTLPPPPATTTTAIP---SGLELAQFPSEVNSAAV 240
           QQ          NSKR RE+Q +  V+     AT    +P   SGLELAQFPSEVNS AV
Sbjct: 181 QQQQQEQFRGGENSKRQRETQITTAVSAATASATACPRLPSITSGLELAQFPSEVNSPAV 240

Query: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQP 300
           FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEV Y AAGESSSGHGGDGST P
Sbjct: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHP 300

Query: 301 LNLITRHSD-----ATVVAST--------APLLDPSIYPAPLNAFMAGTQFFPPPRS 324
           LNLI   S+     A+  A+T        APLLDP+IYPAPLNAFMAGTQFFPP RS
Sbjct: 301 LNLIAGSSNPGPTSASTSAATSTNPSAAAAPLLDPTIYPAPLNAFMAGTQFFPPSRS 337

[Close]

BLAST of Sed0001560 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.1e-67
Identity = 169/373 (45.31%), Postives = 218/373 (58.45%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQ--QPEEGEEEREHNLFLYRNDQDLYSHN----H 60
           MA FF LGG           QEQQHQ+    +       +N FLYRN+   + HN    +
Sbjct: 1   MANFFSLGG----------NQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPN 60

Query: 61  NNKGFEIW---------------PQQYNPNPSPLPN----HLSFGVGPSRRSFLINDTDH 120
             KGFE+W                QQ+     PL +     +  GVGPSR  F I+  DH
Sbjct: 61  TYKGFELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDH 120

Query: 121 DPSRTAFSVSRPAAFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWV 180
           + SR+ F + R        GG++CQDCGNQ+KKDC ++RCRTCCKSRGF CQTHVKSTWV
Sbjct: 121 EASRSGFVMMRSG-----GGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWV 180

Query: 181 PAAKRRERQQHIAALQQQ---------DLNSKRPRESQSAVVTLPPPPATTTTAIPS--- 240
           PAAKRRERQQ +AALQQQ         +  +KR RE  SA        +  +T +PS   
Sbjct: 181 PAAKRRERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSA-------SSLVSTRLPSNTN 240

Query: 241 GLELAQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYN- 300
           GLE+ +FPS+V ++AVF+C+++S+++D +++ AYQ AV+IGGHVFKGILYDQG E  YN 
Sbjct: 241 GLEVGKFPSKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNN 300

Query: 301 ---AAGESSSG--------HGGDGSTQPLNLITRHSDATVVASTAPLLDPSIYPAPLNAF 324
              A G++SSG        H  + +       T   DAT  A  +  LDPS++PAPL+ F
Sbjct: 301 MVAAGGDTSSGGSAGGVQHHHHNSAAVATATTTSGGDAT-AAGPSNFLDPSLFPAPLSTF 350

[Close]

BLAST of Sed0001560 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-61
Identity = 172/385 (44.68%), Postives = 210/385 (54.55%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQ------------- 60
           MAGFF L GGGGG  G  N QE  H+          E  L+ YRN               
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQE-DHRSNTNPPPPVSEAWLW-YRNPNVNANANTNVNANA 60

Query: 61  -----------DLYSHNHNNKGFEIWPQQYNPNPSPLPNHLSFGVGPSRRSFLINDTDHD 120
                      +L+  NHN +      QQ+        +    GVGPS      N  D  
Sbjct: 61  PSSSNAALGTLELW-QNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNH----NQFDIS 120

Query: 121 PSRTAFSVSRPAAFSL--------PAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQT 180
              +     R AA  +         +GGV+CQDCGNQ+KKDC+++RCRTCCKSRGF C T
Sbjct: 121 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 180

Query: 181 HVKSTWVPAAKRRERQQHIAALQQQ------DLNSKRPRESQSAVVTLPPPPATTTTAIP 240
           HV+STWVPAAKRRERQQ +A +Q Q      +   KR RE+  A  +     +   T IP
Sbjct: 181 HVRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSS-----SLVCTRIP 240

Query: 241 --SGLELAQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVS 300
             SGLE+  FP+EV+S+AVFRCV+VS+++D +EEFAYQTAV+IGGH+FKGILYD GP  S
Sbjct: 241 SHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSS 300

Query: 301 ----YN--AAGESSSGHGGDGSTQPLNLITRHSDATVVAST---------------APLL 324
               YN  AAGESSSG GG    Q LNLIT  S     AS+               A  +
Sbjct: 301 GGGGYNVVAAGESSSGGGG---AQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYI 360

[Close]

BLAST of Sed0001560 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.2e-61
Identity = 165/376 (43.88%), Postives = 214/376 (56.91%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL    GGR+   N  +Q H Q  ++   + + N +LY    ++Y   +NNKGFE
Sbjct: 1   MAGFFYL----GGRDNNSNNNKQDHHQVDKDHHHQDKSN-YLYLYKDEIY---NNNKGFE 60

Query: 61  IWPQQY------------NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAF----SV 120
           IWP QY              + S   N  SFG+ PS  S   ++ +++ SR+ +    S 
Sbjct: 61  IWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSS---SNNNNNRSRSLYFNVVSD 120

Query: 121 SRPAAFSLP-AGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180
             P  F++   GG+NCQDCGNQ+KKDC ++RCRTCCKSRGFHCQTHVKSTWVPAAKRRER
Sbjct: 121 HEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180

Query: 181 QQHIAALQ------QQDLNSKRPRESQ---------------SAVVTLPPPPATTTTAIP 240
              +A+LQ      ++  N+KR RE+                SA+       A +     
Sbjct: 181 LAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSN---- 240

Query: 241 SGLELAQ-FPSEVNSAAVFRCVKVSAM--DDADEEFAYQTAVNIGGHVFKGILYDQGPEV 300
           SGLE++Q  P EVNS A+FRCV+VS++  D+ D+ +AYQTAVNIGGH+FKGILYDQGPE 
Sbjct: 241 SGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEH 300

Query: 301 SYNAAGESSSGHGGDGSTQPLNLITRHSDATVVASTAP-----------LLDP-SIYPAP 324
             N                 LNL+   +  T V  TA            +LDP S+YPA 
Sbjct: 301 QDN---------------HHLNLLASTATTTNVEETATKTVTGNNNNGLMLDPSSLYPAQ 346

[Close]

BLAST of Sed0001560 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.1e-56
Identity = 159/358 (44.41%), Postives = 197/358 (55.03%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEE----REHNLFL--------YRNDQD 60
           MAGFF LG GGGG    P+            G E     R  N           Y+   +
Sbjct: 1   MAGFFSLGHGGGG--NTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLE 60

Query: 61  LYSHNHNNKGFEIWPQQYNPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPA 120
           L+ H +N +      QQ         +    GVGPS RS +      + S  A  + R  
Sbjct: 61  LWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLI------ETSGGALMMMRSG 120

Query: 121 AFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIA 180
           + S   GG +CQDCGNQSKKDC+++RCRTCCKSRG  C THVKSTWVPAAKRRERQQ ++
Sbjct: 121 SGS---GGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLS 180

Query: 181 ALQQ-QDLNSKRPRESQSAVVTLPPPPATTT----TAIP----SGLELAQFPSEVNSAAV 240
             QQ Q L    P+  +  +      PA +T    T IP    SGLE+  FP EV+S+AV
Sbjct: 181 TGQQPQQLGGSVPKRQRERI------PARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAV 240

Query: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQP 300
           FRCV+VS++DD +EE+AY+TAV+IGGHVFKG+LYDQGP      A  SSSG    G +QP
Sbjct: 241 FRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGP------AERSSSG----GGSQP 300

Query: 301 LNLITRHSDAT-----------VVASTAP-LLDPSI--YPAPLNAFMAGTQFFPPPRS 324
           LNLIT    A+           VV ST+   +DP+   YP P+N FM GT FF   RS
Sbjct: 301 LNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHFFSNSRS 331

[Close]

BLAST of Sed0001560 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.5e-55
Identity = 162/366 (44.26%), Postives = 211/366 (57.65%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAG FYLGG         +  +Q H Q+ +  E++  + L+LY++  ++Y   +NNKGFE
Sbjct: 1   MAGLFYLGG--------RDHNKQDHHQEKDHNEDKSNNYLYLYKD--EIY---NNNKGFE 60

Query: 61  IWPQQY-----NPNPSPLPNHL-SFGVGPS----------RRSFLIN-DTDHDPSRTA-- 120
           I+P QY       N +  P +L SFG+ PS           RS   N  +DH+P R++  
Sbjct: 61  IFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTG 120

Query: 121 -FSVSRPAAFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKR 180
            F+V+R        G +NCQDCGNQ+KKDC ++RCRTCCKSRGF CQTHVKSTWV AAKR
Sbjct: 121 GFTVTR-------QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKR 180

Query: 181 RERQQHIAAL---QQQDLNS----------KRPRESQSAVVTLPPPPATTTTAIPSGLEL 240
           RERQ  +A L   + +D NS          K   ++ S              A  SGLE 
Sbjct: 181 RERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLET 240

Query: 241 AQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGES 300
           +  P E++S AVFRC++VS++DD DEE+AYQTAV+IGGHVFKGILYDQGP   ++    S
Sbjct: 241 SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHR--YS 300

Query: 301 SSGHGGDGSTQPLNLI-TRHSDATVVASTA-----PLLDP-SIYPA---PLNAFMA-GTQ 323
           SS +G       LNL+ +  S AT  A TA       +DP S+Y A   P NAF+A GT 
Sbjct: 301 SSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFNAFVAGGTP 344

[Close]

BLAST of Sed0001560 vs. ExPASy TrEMBL
Match: A0A0A0LNQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G364580 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.8e-122
Identity = 253/364 (69.51%), Postives = 270/364 (74.18%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQ        EE EEERE NLFLYRNDQ++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQ--------EEDEEEREQNLFLYRNDQEIY-----NKGFE 60

Query: 61  IWPQQYN---------PNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPAAFS 120
           IWPQQYN         PNPS LPNHLSFGVGPSRRSF+IND   +PSR+AF++ RPAA +
Sbjct: 61  IWPQQYNNNNNHQHQQPNPS-LPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAA 120

Query: 121 L--------PAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180
                     AGG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRER
Sbjct: 121 FAAAAASAATAGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 180

Query: 181 QQHIAALQQQDL--------NSKRPRESQSAVVTLPPPPATTTT-----AIPSGLELAQF 240
           QQ IAALQ Q          NSKR RE+Q+A      P A+ +      +I SGLELAQF
Sbjct: 181 QQQIAALQHQQQQEQFRGGDNSKRLRETQTATAIAAAPTASASACPRLPSITSGLELAQF 240

Query: 241 PSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSG 300
           PSEVNS AVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPE+ Y AAGESSSG
Sbjct: 241 PSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPELRYTAAGESSSG 300

Query: 301 HGGDGSTQPLNLI-----------TRHSDATVVASTAPLLDPSIYPAPLNAFMAGTQFFP 324
           HGGDGST PLNLI           T  + A   ASTAPLLDPSIYPAPLNAFMAGTQFFP
Sbjct: 301 HGGDGSTHPLNLIAGPTSTSTSAATSTNPAAASASTAPLLDPSIYPAPLNAFMAGTQFFP 347

[Close]

BLAST of Sed0001560 vs. ExPASy TrEMBL
Match: A0A1S3BB54 (protein SHI RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103488016 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.8e-122
Identity = 252/364 (69.23%), Postives = 269/364 (73.90%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQ        EE EEERE NLFLYRNDQ++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQ--------EEDEEEREQNLFLYRNDQEIY-----NKGFE 60

Query: 61  IWPQQYN---------PNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPAAFS 120
           IWPQQYN         PNPS LPNHLSFGVGPSRRSF+IND   +PSR+AF++ RPAA +
Sbjct: 61  IWPQQYNNNNNHQHQQPNPS-LPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAA 120

Query: 121 L--------PAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180
                     AGG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRER
Sbjct: 121 FAAAAASAATAGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 180

Query: 181 QQHIAALQQQDL--------NSKRPRESQSAVVTLPPPPATTTT-----AIPSGLELAQF 240
           QQ IAALQ Q          NSKR RE+Q+       P A+ +      +I SGLELAQF
Sbjct: 181 QQQIAALQHQQQQEQFRGGDNSKRLRETQTTTAVAAAPTASASACPRLPSITSGLELAQF 240

Query: 241 PSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSG 300
           PSEVNS AVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPE+ Y AAGESSSG
Sbjct: 241 PSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPELRYTAAGESSSG 300

Query: 301 HGGDGSTQPLNLITRHSDAT-----------VVASTAPLLDPSIYPAPLNAFMAGTQFFP 324
           HGGDGST PLNLIT  +  T             ASTAPLLDPSIYPAPLNAFMAGTQFFP
Sbjct: 301 HGGDGSTHPLNLITGPTSTTTSAATSTNPAAAAASTAPLLDPSIYPAPLNAFMAGTQFFP 347

[Close]

BLAST of Sed0001560 vs. ExPASy TrEMBL
Match: A0A6J1KC02 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491917 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.9e-115
Identity = 247/357 (69.19%), Postives = 270/357 (75.63%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQE+         EEERE NLF+YRN +++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQEE---------EEEREQNLFMYRN-EEIY-----NKGFE 60

Query: 61  IWPQQY---NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRP-AAFSLPA-- 120
           IWPQQY   + NPS L +HLSFGVGPSRRSF+IND+D +PSR+AF+V RP AAF+  A  
Sbjct: 61  IWPQQYTNHHQNPS-LTDHLSFGVGPSRRSFMINDSD-EPSRSAFTVMRPAAAFAASAAA 120

Query: 121 ----GGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAAL 180
               GG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQ IAAL
Sbjct: 121 AAAGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAAL 180

Query: 181 QQQDL--------NSKRPRESQ-SAVVTLPPPPATTTTAIP---SGLELAQFPSEVNSAA 240
           QQQ          NSKR RE+Q +  V+     AT    +P   SGLELAQFPSEVNS A
Sbjct: 181 QQQQQQEQFRGGENSKRQRETQITTTVSAATASATACPRLPSITSGLELAQFPSEVNSPA 240

Query: 241 VFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQ 300
           VFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEV Y AAGESSSGHGGDGST 
Sbjct: 241 VFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTH 300

Query: 301 PLNLITRHSDA------------TVVASTAPLLDPSIYPAPLNAFMAGTQFFPPPRS 324
           PLNLI   S+A            T  ++ APLLDP+IYPAPLNAFMAGTQFFPP RS
Sbjct: 301 PLNLIAGSSNAGPTSASTSAATSTNPSAAAPLLDPTIYPAPLNAFMAGTQFFPPSRS 337

[Close]

BLAST of Sed0001560 vs. ExPASy TrEMBL
Match: A0A6J1HC07 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462711 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.0e-114
Identity = 248/357 (69.47%), Postives = 271/357 (75.91%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL   GGGREGPPNKQE+         EEERE NLF+YRN +++Y     NKGFE
Sbjct: 1   MAGFFYL---GGGREGPPNKQEE---------EEEREQNLFMYRN-EEIY-----NKGFE 60

Query: 61  IWPQQY---NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRP-AAFSLPA-- 120
           IWPQQY   + NPS L +HLSFGVGPSRRSF+IND+D +PSR+AF+V RP AAF+  A  
Sbjct: 61  IWPQQYTNHHQNPS-LTDHLSFGVGPSRRSFMINDSD-EPSRSAFTVMRPAAAFAASAAA 120

Query: 121 ---GGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAALQ 180
              GG+NCQDCGNQ+KKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQ IAALQ
Sbjct: 121 AAGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQ 180

Query: 181 QQDL--------NSKRPRESQ-SAVVTLPPPPATTTTAIP---SGLELAQFPSEVNSAAV 240
           QQ          NSKR RE+Q +  V+     AT    +P   SGLELAQFPSEVNS AV
Sbjct: 181 QQQQQEQFRGGENSKRQRETQITTAVSAATASATACPRLPSITSGLELAQFPSEVNSPAV 240

Query: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQP 300
           FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEV Y AAGESSSGHGGDGST P
Sbjct: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHP 300

Query: 301 LNLITRHSD-----ATVVAST--------APLLDPSIYPAPLNAFMAGTQFFPPPRS 324
           LNLI   S+     A+  A+T        APLLDP+IYPAPLNAFMAGTQFFPP RS
Sbjct: 301 LNLIAGSSNPGPTSASTSAATSTNPSAAAAPLLDPTIYPAPLNAFMAGTQFFPPSRS 337

[Close]

BLAST of Sed0001560 vs. ExPASy TrEMBL
Match: A0A6J1GJN6 (protein SHI RELATED SEQUENCE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111454480 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.9e-94
Identity = 212/341 (62.17%), Postives = 235/341 (68.91%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MA  FY+   GG  EGPPNK+EQQ  +Q +         LF+YRNDQ ++     +KGFE
Sbjct: 1   MAELFYV---GGREEGPPNKEEQQQHKQTQP-------TLFMYRNDQQIH-----HKGFE 60

Query: 61  IWPQQYNPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPAAFSLPAGGVNCQ 120
           IWP  Y         H S  VG SRR+    D+DH PSR+AF+ +RPAA +  AGG+NCQ
Sbjct: 61  IWPPHYQ-------THFSSAVGQSRRT----DSDH-PSRSAFTATRPAAAT--AGGINCQ 120

Query: 121 DCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIAALQQQDLNSKRP 180
           DCGNQ+KKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQ      +  D NSKR 
Sbjct: 121 DCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQ-----FRSGD-NSKRL 180

Query: 181 RESQSAVVTLPPPPATTTTAIPSGL--ELAQFPSEVNSAAVFRCVKVSAMDDADEEFAYQ 240
           RE+QSA        AT T  +PS    EL +FPSEVNS AVFRCVKVSAMDD DEEFAYQ
Sbjct: 181 RETQSAT-------ATATPRLPSSFTSELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAYQ 240

Query: 241 TAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQPLNLITRHSDATVVAST--- 300
           TAVNIGGHVFKGILYDQG EV Y  AGESSSGHGGDGS  PLNLI   S+A   ++T   
Sbjct: 241 TAVNIGGHVFKGILYDQGSEVHY-TAGESSSGHGGDGSVHPLNLIAGPSNAAAASTTTSA 298

Query: 301 -------------APLLDPSIYPAPLNAFMAGTQFFPPPRS 324
                        APLLDPSIYPAPLNAFMAGTQFFPP RS
Sbjct: 301 ATSSNPTATAAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 298

[Close]

BLAST of Sed0001560 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-62
Identity = 172/385 (44.68%), Postives = 210/385 (54.55%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQ------------- 60
           MAGFF L GGGGG  G  N QE  H+          E  L+ YRN               
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQE-DHRSNTNPPPPVSEAWLW-YRNPNVNANANTNVNANA 60

Query: 61  -----------DLYSHNHNNKGFEIWPQQYNPNPSPLPNHLSFGVGPSRRSFLINDTDHD 120
                      +L+  NHN +      QQ+        +    GVGPS      N  D  
Sbjct: 61  PSSSNAALGTLELW-QNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNH----NQFDIS 120

Query: 121 PSRTAFSVSRPAAFSL--------PAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQT 180
              +     R AA  +         +GGV+CQDCGNQ+KKDC+++RCRTCCKSRGF C T
Sbjct: 121 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 180

Query: 181 HVKSTWVPAAKRRERQQHIAALQQQ------DLNSKRPRESQSAVVTLPPPPATTTTAIP 240
           HV+STWVPAAKRRERQQ +A +Q Q      +   KR RE+  A  +     +   T IP
Sbjct: 181 HVRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSS-----SLVCTRIP 240

Query: 241 --SGLELAQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVS 300
             SGLE+  FP+EV+S+AVFRCV+VS+++D +EEFAYQTAV+IGGH+FKGILYD GP  S
Sbjct: 241 SHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSS 300

Query: 301 ----YN--AAGESSSGHGGDGSTQPLNLITRHSDATVVAST---------------APLL 324
               YN  AAGESSSG GG    Q LNLIT  S     AS+               A  +
Sbjct: 301 GGGGYNVVAAGESSSGGGG---AQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYI 360

[Close]

BLAST of Sed0001560 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 236.5 bits (602), Expect = 3.0e-62
Identity = 165/376 (43.88%), Postives = 214/376 (56.91%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAGFFYL    GGR+   N  +Q H Q  ++   + + N +LY    ++Y   +NNKGFE
Sbjct: 1   MAGFFYL----GGRDNNSNNNKQDHHQVDKDHHHQDKSN-YLYLYKDEIY---NNNKGFE 60

Query: 61  IWPQQY------------NPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAF----SV 120
           IWP QY              + S   N  SFG+ PS  S   ++ +++ SR+ +    S 
Sbjct: 61  IWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSS---SNNNNNRSRSLYFNVVSD 120

Query: 121 SRPAAFSLP-AGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180
             P  F++   GG+NCQDCGNQ+KKDC ++RCRTCCKSRGFHCQTHVKSTWVPAAKRRER
Sbjct: 121 HEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 180

Query: 181 QQHIAALQ------QQDLNSKRPRESQ---------------SAVVTLPPPPATTTTAIP 240
              +A+LQ      ++  N+KR RE+                SA+       A +     
Sbjct: 181 LAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSN---- 240

Query: 241 SGLELAQ-FPSEVNSAAVFRCVKVSAM--DDADEEFAYQTAVNIGGHVFKGILYDQGPEV 300
           SGLE++Q  P EVNS A+FRCV+VS++  D+ D+ +AYQTAVNIGGH+FKGILYDQGPE 
Sbjct: 241 SGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEH 300

Query: 301 SYNAAGESSSGHGGDGSTQPLNLITRHSDATVVASTAP-----------LLDP-SIYPAP 324
             N                 LNL+   +  T V  TA            +LDP S+YPA 
Sbjct: 301 QDN---------------HHLNLLASTATTTNVEETATKTVTGNNNNGLMLDPSSLYPAQ 346

[Close]

BLAST of Sed0001560 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 218.8 bits (556), Expect = 6.5e-57
Identity = 159/358 (44.41%), Postives = 197/358 (55.03%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEE----REHNLFL--------YRNDQD 60
           MAGFF LG GGGG    P+            G E     R  N           Y+   +
Sbjct: 1   MAGFFSLGHGGGG--NTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLE 60

Query: 61  LYSHNHNNKGFEIWPQQYNPNPSPLPNHLSFGVGPSRRSFLINDTDHDPSRTAFSVSRPA 120
           L+ H +N +      QQ         +    GVGPS RS +      + S  A  + R  
Sbjct: 61  LWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLI------ETSGGALMMMRSG 120

Query: 121 AFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQHIA 180
           + S   GG +CQDCGNQSKKDC+++RCRTCCKSRG  C THVKSTWVPAAKRRERQQ ++
Sbjct: 121 SGS---GGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLS 180

Query: 181 ALQQ-QDLNSKRPRESQSAVVTLPPPPATTT----TAIP----SGLELAQFPSEVNSAAV 240
             QQ Q L    P+  +  +      PA +T    T IP    SGLE+  FP EV+S+AV
Sbjct: 181 TGQQPQQLGGSVPKRQRERI------PARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAV 240

Query: 241 FRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGESSSGHGGDGSTQP 300
           FRCV+VS++DD +EE+AY+TAV+IGGHVFKG+LYDQGP      A  SSSG    G +QP
Sbjct: 241 FRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGP------AERSSSG----GGSQP 300

Query: 301 LNLITRHSDAT-----------VVASTAP-LLDPSI--YPAPLNAFMAGTQFFPPPRS 324
           LNLIT    A+           VV ST+   +DP+   YP P+N FM GT FF   RS
Sbjct: 301 LNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHFFSNSRS 331

[Close]

BLAST of Sed0001560 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 216.9 bits (551), Expect = 2.5e-56
Identity = 162/366 (44.26%), Postives = 211/366 (57.65%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAG FYLGG         +  +Q H Q+ +  E++  + L+LY++  ++Y   +NNKGFE
Sbjct: 1   MAGLFYLGG--------RDHNKQDHHQEKDHNEDKSNNYLYLYKD--EIY---NNNKGFE 60

Query: 61  IWPQQY-----NPNPSPLPNHL-SFGVGPS----------RRSFLIN-DTDHDPSRTA-- 120
           I+P QY       N +  P +L SFG+ PS           RS   N  +DH+P R++  
Sbjct: 61  IFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTG 120

Query: 121 -FSVSRPAAFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKR 180
            F+V+R        G +NCQDCGNQ+KKDC ++RCRTCCKSRGF CQTHVKSTWV AAKR
Sbjct: 121 GFTVTR-------QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKR 180

Query: 181 RERQQHIAAL---QQQDLNS----------KRPRESQSAVVTLPPPPATTTTAIPSGLEL 240
           RERQ  +A L   + +D NS          K   ++ S              A  SGLE 
Sbjct: 181 RERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLET 240

Query: 241 AQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGES 300
           +  P E++S AVFRC++VS++DD DEE+AYQTAV+IGGHVFKGILYDQGP   ++    S
Sbjct: 241 SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHR--YS 300

Query: 301 SSGHGGDGSTQPLNLI-TRHSDATVVASTA-----PLLDP-SIYPA---PLNAFMA-GTQ 323
           SS +G       LNL+ +  S AT  A TA       +DP S+Y A   P NAF+A GT 
Sbjct: 301 SSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFNAFVAGGTP 344

[Close]

BLAST of Sed0001560 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 216.9 bits (551), Expect = 2.5e-56
Identity = 162/366 (44.26%), Postives = 211/366 (57.65%), Query Frame = 0


Query: 1   MAGFFYLGGGGGGREGPPNKQEQQHQQQPEEGEEEREHNLFLYRNDQDLYSHNHNNKGFE 60
           MAG FYLGG         +  +Q H Q+ +  E++  + L+LY++  ++Y   +NNKGFE
Sbjct: 1   MAGLFYLGG--------RDHNKQDHHQEKDHNEDKSNNYLYLYKD--EIY---NNNKGFE 60

Query: 61  IWPQQY-----NPNPSPLPNHL-SFGVGPS----------RRSFLIN-DTDHDPSRTA-- 120
           I+P QY       N +  P +L SFG+ PS           RS   N  +DH+P R++  
Sbjct: 61  IFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTG 120

Query: 121 -FSVSRPAAFSLPAGGVNCQDCGNQSKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKR 180
            F+V+R        G +NCQDCGNQ+KKDC ++RCRTCCKSRGF CQTHVKSTWV AAKR
Sbjct: 121 GFTVTR-------QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKR 180

Query: 181 RERQQHIAAL---QQQDLNS----------KRPRESQSAVVTLPPPPATTTTAIPSGLEL 240
           RERQ  +A L   + +D NS          K   ++ S              A  SGLE 
Sbjct: 181 RERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLET 240

Query: 241 AQFPSEVNSAAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVSYNAAGES 300
           +  P E++S AVFRC++VS++DD DEE+AYQTAV+IGGHVFKGILYDQGP   ++    S
Sbjct: 241 SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHR--YS 300

Query: 301 SSGHGGDGSTQPLNLI-TRHSDATVVASTA-----PLLDP-SIYPA---PLNAFMA-GTQ 323
           SS +G       LNL+ +  S AT  A TA       +DP S+Y A   P NAF+A GT 
Sbjct: 301 SSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFNAFVAGGTP 344

The following BLAST results are available for this feature:

BLAST of Sed0001560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444770.1	1.2e-121	69.23	PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis melo]	[more]
XP_004152766.2	6.0e-121	69.42	LOW QUALITY PROTEIN: protein EXPRESSION OF TERPENOIDS 1 [Cucumis sativus]	[more]
KAG7029415.1	1.1e-114	69.58	Protein SHI RELATED SEQUENCE 7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022996783.1	1.4e-114	69.19	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]	[more]
XP_022962177.1	4.1e-114	69.47	protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata]	[more]

BLAST of Sed0001560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
K4B6C9	5.1e-67	45.31	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9SD40	2.5e-61	44.68	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9LQZ5	4.2e-61	43.88	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9XGX0	9.1e-56	44.41	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9FXH7	3.5e-55	44.26	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of Sed0001560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNQ5	5.8e-122	69.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G364580 PE=3 SV=1	[more]
A0A1S3BB54	5.8e-122	69.23	protein SHI RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103488016 PE=3...	[more]
A0A6J1KC02	6.9e-115	69.19	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491917 ...	[more]
A0A6J1HC07	2.0e-114	69.47	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC11146271...	[more]
A0A6J1GJN6	3.9e-94	62.17	protein SHI RELATED SEQUENCE 5-like OS=Cucurbita moschata OX=3662 GN=LOC11145448...	[more]

BLAST of Sed0001560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	1.8e-62	44.68	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	3.0e-62	43.88	SHI-related sequence 5	[more]
AT5G66350.1	6.5e-57	44.41	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	2.5e-56	44.26	SHI-related sequence 7	[more]
AT1G19790.2	2.5e-56	44.26	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 118..160 e-value: 1.0E-26 score: 90.5
None	No IPR available	PFAM	PF05142	DUF702	coord: 116..258 e-value: 2.4E-63 score: 213.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..195
None	No IPR available	PANTHER	PTHR31604:SF2	PROTEIN SHI RELATED SEQUENCE 7	coord: 1..321
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 209..257 e-value: 9.2E-27 score: 90.7
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001560.1	Sed0001560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding