Sed0001530 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAATTAAGAAAAGAGAAAAGGGTTTTGAGAAGGTAAGGTAACGTTCAAATATTGAAAATCTTGGTTCGGAACAGATTTAAATGAAAGCCCTCGGAAAGCCGTTATCCGGCCGAAGAGAAGCCCCTTTGTAATTAGGGCTTTTTCTTACTTCTTCAAAAGCTCAAAATTCTCTCATCCCCAATTGTAATTCAATTCGTCGATTCCAAATGACGAAGAAGACGCCATCGATTGGAAGCAGAGTTCGAAGCAAGCTTGCGGACATTACGAATTCCAAAACCATGAGAGCTCACATGGAAGACGAGAGATCTTCGGAAACTTTGCGGTCTAATAAGGACCTTGTCGATCAGCTTGTGAAGGTTTCGATCTGTTCTTTTATATGTATTCTCTTTTTTTCATAATTTTTGTTTGCTCTGAGATATTTGTTGGATTGGATGTGATTTCTGGATCAGGAAAATATGGCTCTCATTAAACATGTCTTGGAGAGGAAGTATCCTTCTGGATTTGCCTTTTCTTCTTTTTTGCCCTATTTGATTGTCCTGAATTAGAACTTGCGTTTTTCTTTAAATTGTGCTTAAATTGAGCTGTTGAGGATCCCATGTTCAAAATGTGCCAGGCTTCTCAGTATCATTAAACTCAAAATTGTTAAAGATCAAACCCGTGACCGCGTAGTTGAGTTTACTTGGTTTCAAATTGATTGATATAATCAGTTCGCTTGATTTTAAGCTTGAGCATCTTAGTCATTTTACGAGGACTTATCCCTTCTTTTGATATACATGCAATGTTTTTGGTTTTTTCTTTTTTTTATCCTCAAATGTGTATTATGTCCAATAAAAAAAATGGGATCCGATTTAGATTGGTAAATCTAGAGAGCCACCATCTTGTTGAGTTATGTTGAAGATCATACATTGGAAAGATAAAAAAAAGACTTTCTCCTAATTATAAGATAGGTGGACTACTTTTGGAATCTCATATATGAGCAATTCTTGATATCTGTTTTTTTTTATGTGTATGTTAGTTGCTTTGATTTTGTGGCATGCCTGTTCTTATTTTATTCAATTAATCTACCCTTTTAAAGATTTAAGTACTAAGAAAACATATGGACTTATTTGAAACTCCCATTATATCTTGTCTAGTGCTTGTATTTTCCAATCAAAACAGAACTTTCAAACAAAACAAAAATCCTTCACATTTAAACAGTACAATCATTGATCTGGGTGAGGCTGAGATCAAGAAACTTCGGGGAAGTATTCAGAAACTGCAGCTTCAGAATTGGCACCTTGCTCAATCAAACAGTCGCTTTTTGGCAGTATGATCATTATATTCAGAACCATTTATGATTATCCATGGGATACATCTGATACTTTAGTTAACTATACATTGTTTTCCTCTTGCAGGAAATCAATTTTGGGAGAAATAAAGTAAGTTTCCAGAATTCTTGAATTGGTTATTGCAGCATTTATTATGAATTATTAAATCTCATTTTATTTATGATGCTCAATAACTTGATCCTAATGTGTTTCAGATAAAATCATTGGAGCACGAGATTGAATGCAAAGAAGCCTTGCTAAAAGCAAAGTGTTTGAATGTAATTGCAGTAACTTCACACTTTTTTTACCACAAAGAATAGTTTGGATATTTATTTTGTCTAGCTGTTGAACTGTTTAGCTTAACATAGTTTGTTTTAAAATTTAGTAGTAGTTTAAAGATCTAGAAGATCCAAGAATTTCTAGTAATGCTTCTTAGTATTGTTTATAACCTCTCATAGATCAATGATTCCTTTTTTTTTTTTTCACCCAACTCTTCTACTCTGGAAACCTTCTAGAAAACCATCTGGAAACAGAAACATCTACACATTATATATAGACTTAAGGACATAATTAAAGGATGAACTTTGTGTTAAAGCATCACTAAACCAAAAGCTTAATTGCCTTTTATTTATACTTGTACACTGTCCTTTACTTCTGGACTTGAGAATCACAATACTTCCTTATAAACTAGACCCAACAAGCCTAGAAGAAAAACTGAAGTTTTCCTTTTCAAGATTTAGATAAGCTAGTTACAAATAAAATAAAATTCTATACAAATGTTCTTCATCTTCAATGAACAATGAAAAAATTTGTATTTTAACAAGAAATGGCTGTATATTCTAACAGGGGAAAGCAGAGATGAATAGTGGAAATACTGAATGGCAGGTAATTGGCAATTTCCTTCTGTCAGGTATCTGCTTTATTATTCTTTTCAGGCCTCACACTTTGCTCATAACTGTTTATTTCGCCCATTTTTTTTCCTTGGTTCAGGAAGGAGAGAAGCCAACAGAGCAATTTTCACTTGCATTGAAAACTGATATCAAAGCTTGCAATGGAAATAGAAAGCCACCTGGAAGAGCTAGAAGTCAATGTATGTTCATGAATTTATGAATATGAGCAAAAGCCAAAAACATATTCCATTTTACTGTCAATTTTAAATTGCCACCCTTACCCTTATGTTAAAGGGTGTGTTTGGATTGAAATGCCTTCTAGAATAAGTACTTCTATTACCAGCACTTCAGTTAACCGTGTTTCGTAAGAAGTTATTCTGTTGCTTTATTCTTTTACTCTTTTGAAAATGCTTTTGATAAAGTTCATTCTCCAGGACTTTTTTTTCAAAGATGATGTTAGTACTTCTAAATCTTTTTCAAGAACAATTTCGTCTTGCTTCCAAATAGTATGATGGTTTTGAGACCCTGCTAAAAGGGCTCCAAAACTTATGAACTTTAGGATGTGTTTGGATAGAGTGATTTGGAGAAGAGGGGTAATGGCAGTGGTTATGAGAAGTTTGAGAAAGATAAAACCGTGTTTAGTACTGGTTATAGCAGAAAACCCTCCTTTGAATTGAGAGGCTACGAGTAGTTGAAGTAGAAGTGTATTATACATGGACGGAATATTGGGGCTTTTCGGAGGTTTATAGAAGGGTTTTTTTTTTTTGAGGTTCTTATTAGGAACTTTTTGGAGCTGCTTCATCCAAACGTGAGGTTGAATCAACTTCATGTCCAACCCTCCAAAACCCTCATTAGTTAATAGATTATATTAGTGTACTAGGTGTTACTTACTGTTCTGGTTGAAAAGTAATAATGGCACTTGAATTGCAGCTATGAGCCCTTCTACTTCATACTCAACAGTGGCTGATAAAGAAAAAGTTGTAAACAAAAGGTACTACCCGTATTTGAACAACTATTTTTTTTCAAATTTAGTTATTTGCTTTACACATCTATCTATTTTCAGACATTGTGCAAGAAGACATAGATTTAAATCTCAAATTAGGCAGCCTGAAGAGAACTTATTTGAGATAGAAGATATGAAATTTTCTGCTACTGAAGAACAACAAAGGAAGAACAATGGCATTTCATCGTCATCGTCATCGTCCTCCGGATTGGTAGAAGAAGCTTCAGTTCTGCAAAGCTCTTCAATTGGAAGAGCAGCTGAAAAGATTTCAATCCTACAAGTAATTTCGTCTCGACGTTAAAATCAGACCACAAGAATGGTGAGTCAGATCAGTATACTGTAATTTCAGCTATCAGTTAAATTTTACTTTCATGTTGTACTTATGCTTATTGATCTATGGCTTGTGTTGTTTGTGATGTTTATATCTTATTTTCATGTAAATTATATCATTTGTTAGAATATTGTGTTATTAATGTAGAGAAGAGACTCGAG AAGAAATTAAGAAAAGAGAAAAGGGTTTTGAGAAGGTAAGGTAACGTTCAAATATTGAAAATCTTGGTTCGGAACAGATTTAAATGAAAGCCCTCGGAAAGCCGTTATCCGGCCGAAGAGAAGCCCCTTTGTAATTAGGGCTTTTTCTTACTTCTTCAAAAGCTCAAAATTCTCTCATCCCCAATTGTAATTCAATTCGTCGATTCCAAATGACGAAGAAGACGCCATCGATTGGAAGCAGAGTTCGAAGCAAGCTTGCGGACATTACGAATTCCAAAACCATGAGAGCTCACATGGAAGACGAGAGATCTTCGGAAACTTTGCGGTCTAATAAGGACCTTGTCGATCAGCTTGTGAAGGAAAATATGGCTCTCATTAAACATGTCTTGGAGAGGAATACAATCATTGATCTGGGTGAGGCTGAGATCAAGAAACTTCGGGGAAGTATTCAGAAACTGCAGCTTCAGAATTGGCACCTTGCTCAATCAAACAGTCGCTTTTTGGCAGAAATCAATTTTGGGAGAAATAAAATAAAATCATTGGAGCACGAGATTGAATGCAAAGAAGCCTTGCTAAAAGCAAAGTGTTTGAATGGGAAAGCAGAGATGAATAGTGGAAATACTGAATGGCAGGAAGGAGAGAAGCCAACAGAGCAATTTTCACTTGCATTGAAAACTGATATCAAAGCTTGCAATGGAAATAGAAAGCCACCTGGAAGAGCTAGAAGTCAATCTATGAGCCCTTCTACTTCATACTCAACAGTGGCTGATAAAGAAAAAGTTGTAAACAAAAGACATTGTGCAAGAAGACATAGATTTAAATCTCAAATTAGGCAGCCTGAAGAGAACTTATTTGAGATAGAAGATATGAAATTTTCTGCTACTGAAGAACAACAAAGGAAGAACAATGGCATTTCATCGTCATCGTCATCGTCCTCCGGATTGGTAGAAGAAGCTTCAGTTCTGCAAAGCTCTTCAATTGGAAGAGCAGCTGAAAAGATTTCAATCCTACAAGTAATTTCGTCTCGACGTTAAAATCAGACCACAAGAATGGTGAGTCAGATCAGTATACTGTAATTTCAGCTATCAGTTAAATTTTACTTTCATGTTGTACTTATGCTTATTGATCTATGGCTTGTGTTGTTTGTGATGTTTATATCTTATTTTCATGTAAATTATATCATTTGTTAGAATATTGTGTTATTAATGTAGAGAAGAGACTCGAG ATGACGAAGAAGACGCCATCGATTGGAAGCAGAGTTCGAAGCAAGCTTGCGGACATTACGAATTCCAAAACCATGAGAGCTCACATGGAAGACGAGAGATCTTCGGAAACTTTGCGGTCTAATAAGGACCTTGTCGATCAGCTTGTGAAGGAAAATATGGCTCTCATTAAACATGTCTTGGAGAGGAATACAATCATTGATCTGGGTGAGGCTGAGATCAAGAAACTTCGGGGAAGTATTCAGAAACTGCAGCTTCAGAATTGGCACCTTGCTCAATCAAACAGTCGCTTTTTGGCAGAAATCAATTTTGGGAGAAATAAAATAAAATCATTGGAGCACGAGATTGAATGCAAAGAAGCCTTGCTAAAAGCAAAGTGTTTGAATGGGAAAGCAGAGATGAATAGTGGAAATACTGAATGGCAGGAAGGAGAGAAGCCAACAGAGCAATTTTCACTTGCATTGAAAACTGATATCAAAGCTTGCAATGGAAATAGAAAGCCACCTGGAAGAGCTAGAAGTCAATCTATGAGCCCTTCTACTTCATACTCAACAGTGGCTGATAAAGAAAAAGTTGTAAACAAAAGACATTGTGCAAGAAGACATAGATTTAAATCTCAAATTAGGCAGCCTGAAGAGAACTTATTTGAGATAGAAGATATGAAATTTTCTGCTACTGAAGAACAACAAAGGAAGAACAATGGCATTTCATCGTCATCGTCATCGTCCTCCGGATTGGTAGAAGAAGCTTCAGTTCTGCAAAGCTCTTCAATTGGAAGAGCAGCTGAAAAGATTTCAATCCTACAAGTAATTTCGTCTCGACGTTAA MTKKTPSIGSRVRSKLADITNSKTMRAHMEDERSSETLRSNKDLVDQLVKENMALIKHVLERNTIIDLGEAEIKKLRGSIQKLQLQNWHLAQSNSRFLAEINFGRNKIKSLEHEIECKEALLKAKCLNGKAEMNSGNTEWQEGEKPTEQFSLALKTDIKACNGNRKPPGRARSQSMSPSTSYSTVADKEKVVNKRHCARRHRFKSQIRQPEENLFEIEDMKFSATEEQQRKNNGISSSSSSSSGLVEEASVLQSSSIGRAAEKISILQVISSRR Homology
BLAST of Sed0001530 vs. NCBI nr
Match: XP_022998887.1 (shugoshin-1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 315.8 bits (808), Expect = 3.5e-82 Identity = 188/271 (69.37%), Postives = 212/271 (78.23%), Query Frame = 0
BLAST of Sed0001530 vs. NCBI nr
Match: XP_022998886.1 (shugoshin-1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 315.5 bits (807), Expect = 4.6e-82 Identity = 188/272 (69.12%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Sed0001530 vs. NCBI nr
Match: XP_008463238.1 (PREDICTED: uncharacterized protein LOC103501433 isoform X2 [Cucumis melo]) HSP 1 Score: 313.9 bits (803), Expect = 1.3e-81 Identity = 179/270 (66.30%), Postives = 214/270 (79.26%), Query Frame = 0
BLAST of Sed0001530 vs. NCBI nr
Match: XP_008463230.1 (PREDICTED: uncharacterized protein LOC103501433 isoform X1 [Cucumis melo]) HSP 1 Score: 313.5 bits (802), Expect = 1.8e-81 Identity = 179/271 (66.05%), Postives = 214/271 (78.97%), Query Frame = 0
BLAST of Sed0001530 vs. NCBI nr
Match: XP_023525297.1 (shugoshin-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312.8 bits (800), Expect = 3.0e-81 Identity = 188/272 (69.12%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy Swiss-Prot
Match: Q0WTB8 (SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.5e-14 Identity = 41/96 (42.71%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy Swiss-Prot
Match: Q4QSC8 (Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 7.3e-14 Identity = 71/212 (33.49%), Postives = 98/212 (46.23%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy Swiss-Prot
Match: F4J3S1 (SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.4e-12 Identity = 79/266 (29.70%), Postives = 128/266 (48.12%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy Swiss-Prot
Match: E3VXF2 (Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.4e-09 Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy TrEMBL
Match: A0A6J1K985 (shugoshin-1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493410 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.7e-82 Identity = 188/271 (69.37%), Postives = 212/271 (78.23%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy TrEMBL
Match: A0A6J1KBG4 (shugoshin-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493410 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 2.2e-82 Identity = 188/272 (69.12%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy TrEMBL
Match: A0A1S3CJ55 (uncharacterized protein LOC103501433 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501433 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 6.5e-82 Identity = 179/270 (66.30%), Postives = 214/270 (79.26%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy TrEMBL
Match: A0A1S3CIS6 (uncharacterized protein LOC103501433 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501433 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 8.5e-82 Identity = 179/271 (66.05%), Postives = 214/271 (78.97%), Query Frame = 0
BLAST of Sed0001530 vs. ExPASy TrEMBL
Match: A0A6J1DF28 (shugoshin-1 OS=Momordica charantia OX=3673 GN=LOC111020452 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.5e-81 Identity = 187/279 (67.03%), Postives = 219/279 (78.49%), Query Frame = 0
BLAST of Sed0001530 vs. TAIR 10
Match: AT5G04320.2 (Shugoshin C terminus ) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-15 Identity = 41/96 (42.71%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Sed0001530 vs. TAIR 10
Match: AT3G10440.1 (Shugoshin C terminus ) HSP 1 Score: 75.1 bits (183), Expect = 9.8e-14 Identity = 79/266 (29.70%), Postives = 128/266 (48.12%), Query Frame = 0
BLAST of Sed0001530 vs. TAIR 10
Match: AT5G04320.1 (Shugoshin C terminus ) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12 Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Sed0001530 vs. TAIR 10
Match: AT3G44960.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 2.3e-07 Identity = 45/132 (34.09%), Postives = 66/132 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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