Sed0001432 (gene) Chayote v1

Overview


Name	Sed0001432
Type	gene
Organism	Sechium edule (Chayote v1)
Description	binding partner of ACD11 1-like
Location	LG04: 2276334 .. 2279211 (+)
RNA-Seq Expression	Sed0001432
Synteny	Sed0001432

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCAGTTGGGTCACAGACAGCTATTAGGAAACCAAGTTAACAGTCAAACAAACAAACAAGAATTTCTTCTTTTTTATTTCTCTTCGCCATATTCCGCCATAGCTAATTACCTCGCGGAGCTCAATTTTGCCTTCCAGAAATGTCGGTGAGTTCATCATCATTTTCTTATTCTTTGATCTTTGAATCTTTGATGTAGATCTGCCACATTCGTGTTTTGTAATTTGTTTTTTCTGATTGTGTATGGTTGCTATGCTGAGGGATTTGGAATTGTAATGTGGAATTAGGGTTTTTTTTTTTTTTTTTGAGATCTCTGTTTCTGCATCCTCTGGTTTCTACAATGAGCTCTGATTCTGTTTGGATGCTGAGAAAATCTCACTGATGTTGTTCTTTTGTACCTTTTTCTCCCCTGATTTTCTTCTTGTGGGAATTTGGAGTTTATCAAGAAATGGTTCAGATTCTCATTCTCTTTGATCATTTATGAACCAAACAGTTTATTCTTCTCAAATCTCTATTTAGCTGTCTTTCACAATTCCCAACTTTTCAAATTTTGATTTCTCTTTGAAAGGTTGAACTGAATGAAGTGGAAATTATGAATGATTGAAGCACTGATAAACCCTTTTTTTTTAGTTGTATTTTTCTGAAATAACGAGAGTAATAGCTCAACCAGCAAAAGTGTATATCTATGACCAAATGGTCATAAGTTCGAATCTACTCGATGTCGTTGAACTAAAGAAAAAAATAATTAGCTACCTAAAACTTAACTTTGTTTTTTTCTTCTTTTTTTCACTTTGATGATGAATTGAATAAAGTGGAAATTAGAAATGGTTAAATCGCCAGCAAACCTAAATGCTTTTAGTTTCTTAGAATGGCATTTGATCTTTTATGCATATTCTTAATGCGTGAGTTTAGATATTAATCTAACTCGAGAATTATCCATGTTCGAGGTGGAAGAAATGGCGTTGTAAAAGTTTGAGTTAAAAAACCTTAGGGTTTAATTTCAATCTTAGGTTGATTGATGCAGACATATTTAATCTTTTATACATAATTTTAATATGATCACTTGCATTTCTTTATTCATTTGAATGGGGCTTTTCTATTTAAAATCCCATGTAGATGAGAACTGTCAAGGTCAGCAATATCTCAAAGGCTACTTCTGAGAGAGATATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGGTTAGTGATTATATATTCCATCTGTTGCTGTTTTAGAAAATTCATGCTAAAGAATTTTTCAATTTTATTTGTGTATTCATCATTATCTTTTGTGTAGAGAAAATGAAAATACTCAAGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGAAACAGCAATACTTTTGACAGTATGTACCTTTATGCATATTTGTCTCTTTTTTTTTTTCTTTTTTTTTTTTTTTTATAACTGGGAATGGAAACTTGGCCTCACTAAATACCCAGCGACACCTACACCCGTCTCAAGGCTTCGACCTAAAAGACAACAAGAGATTTTACAATTAAGCCGTCTCATAGATTTTGAACCTTGGATCTCTAAAGGGGCATACCTTGAAAATTTCAAGCCTCTACCAACTAGGCTGCCCTTAGGGACAAGTATTTTGTTGTTACAATTATGCTTGTTTTTCTTTTAACTTTTTTCTCTTGTTTCTTGTCTTTCTCTCTCTCAGGGAGCAAAAATTGGTGATCTATCAGTTACAATTACTTTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATTCTGGTAATTCTGCCTTGCATGTGAGCATAAAATGTCTCGGTGTATTTGCATGGTTGTCGACCCTTGAATTTATGCACGTAAACGAATTACATGTTGTGGTCCCTGTTCGTATTTGACATTAGAACGCTTGAAACGATTTGATTCGAAATTCTTCGCGCTGTAATCAGCATCTAAAGGTGTCTTTGTATTCAAATAGGTATTTCAAACTACTTACACTCTTAAAATGCAATGACCTTTTGAAGGATAAAAGACAAACTGTTACTGGGATTGCTCCGAATCAGGCTGAAGACGTCGTAAGTACAATGCTTGCCAGGGGTTTCATCTTGGGGAAGGATGCTCTCAACAAAGCAAAAGTGTTCGATGAACGACTCCAATTGACATCGAATGCTTCTGCAACCGTCGCTTCCCTAGACCGCAAGATGGGCATAACCGAGAAGATAACTGCAGGCACAGCAGTAGTGAACGAAAAGGTCAAGGAGGTGGACGAAATGTTCCAGGTTACCGAAAAGACGAAATCCGCCCTTGCAGTTGCCGAGCAAAAGGCAAGCAGTGCAGGAACCGCGTTGATGAGCAACTATTATGTGTTAACTGGGGCAGCATGGTTTTCAAATGCAGTTACTGCAGTTACAAAGGCTGCTGAGGAAGTGACGCAAATGACCAAGGCAAAAGTCGAGAGAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACAGGGATCATCAATAACTTTGCCGAGCTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAAGACAGTAAGTTGTGAATCATGTGCATGAAAATAGAAAGCCTACACTTGTGAATTACATTGCTTCCCCACTTTAGCTGTGTGATATATGTATGCATTTCATCTAGAGGTGCTCCAATTATAGTGTTTACTTCTTTTTATACAGTTGTTCCTGTTGTTGATGTTGAAATGTTGTGACATTCTTTTCGGTAGAAAAATATATTTTTTCTTAAAAAAATATTATTATTATTATTTTGTAATTTGTAATTGAGATTACTCTTCTCTTGTAATTTCACACCTGAA

mRNA sequence

TTCCAGTTGGGTCACAGACAGCTATTAGGAAACCAAGTTAACAGTCAAACAAACAAACAAGAATTTCTTCTTTTTTATTTCTCTTCGCCATATTCCGCCATAGCTAATTACCTCGCGGAGCTCAATTTTGCCTTCCAGAAATGTCGATGAGAACTGTCAAGGTCAGCAATATCTCAAAGGCTACTTCTGAGAGAGATATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAAATGAAAATACTCAAGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGAAACAGCAATACTTTTGACAGGAGCAAAAATTGGTGATCTATCAGTTACAATTACTTTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATTCTGGATAAAAGACAAACTGTTACTGGGATTGCTCCGAATCAGGCTGAAGACGTCGTAAGTACAATGCTTGCCAGGGGTTTCATCTTGGGGAAGGATGCTCTCAACAAAGCAAAAGTGTTCGATGAACGACTCCAATTGACATCGAATGCTTCTGCAACCGTCGCTTCCCTAGACCGCAAGATGGGCATAACCGAGAAGATAACTGCAGGCACAGCAGTAGTGAACGAAAAGGTCAAGGAGGTGGACGAAATGTTCCAGGTTACCGAAAAGACGAAATCCGCCCTTGCAGTTGCCGAGCAAAAGGCAAGCAGTGCAGGAACCGCGTTGATGAGCAACTATTATGTGTTAACTGGGGCAGCATGGTTTTCAAATGCAGTTACTGCAGTTACAAAGGCTGCTGAGGAAGTGACGCAAATGACCAAGGCAAAAGTCGAGAGAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACAGGGATCATCAATAACTTTGCCGAGCTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAAGACAGTAAGTTGTGAATCATGTGCATGAAAATAGAAAGCCTACACTTGTGAATTACATTGCTTCCCCACTTTAGCTGTGTGATATATGTATGCATTTCATCTAGAGGTGCTCCAATTATAGTGTTTACTTCTTTTTATACAGTTGTTCCTGTTGTTGATGTTGAAATGTTGTGACATTCTTTTCGGTAGAAAAATATATTTTTTCTTAAAAAAATATTATTATTATTATTTTGTAATTTGTAATTGAGATTACTCTTCTCTTGTAATTTCACACCTGAA

Coding sequence (CDS)

ATGTCGATGAGAACTGTCAAGGTCAGCAATATCTCAAAGGCTACTTCTGAGAGAGATATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAAATGAAAATACTCAAGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGAAACAGCAATACTTTTGACAGGAGCAAAAATTGGTGATCTATCAGTTACAATTACTTTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATTCTGGATAAAAGACAAACTGTTACTGGGATTGCTCCGAATCAGGCTGAAGACGTCGTAAGTACAATGCTTGCCAGGGGTTTCATCTTGGGGAAGGATGCTCTCAACAAAGCAAAAGTGTTCGATGAACGACTCCAATTGACATCGAATGCTTCTGCAACCGTCGCTTCCCTAGACCGCAAGATGGGCATAACCGAGAAGATAACTGCAGGCACAGCAGTAGTGAACGAAAAGGTCAAGGAGGTGGACGAAATGTTCCAGGTTACCGAAAAGACGAAATCCGCCCTTGCAGTTGCCGAGCAAAAGGCAAGCAGTGCAGGAACCGCGTTGATGAGCAACTATTATGTGTTAACTGGGGCAGCATGGTTTTCAAATGCAGTTACTGCAGTTACAAAGGCTGCTGAGGAAGTGACGCAAATGACCAAGGCAAAAGTCGAGAGAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACAGGGATCATCAATAACTTTGCCGAGCTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAA

Protein sequence

MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

Homology

[Close]

BLAST of Sed0001432 vs. NCBI nr
Match: XP_008452423.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 265/278 (95.32%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DALNKAK FDERLQ TSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQVTEKT
Sbjct: 121 DALNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. NCBI nr
Match: XP_038891484.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 265/278 (95.32%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKVTSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDK+QTV GIAPNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKKQTVIGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DALNKAK FDERLQLTSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQVTEKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. NCBI nr
Match: XP_004142266.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN49610.1 hypothetical protein Csa_018454 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136
Identity = 265/278 (95.32%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DALNKAK FDERLQLTSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQV EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. NCBI nr
Match: XP_008452424.1 (PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo] >KAA0056831.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa] >TYJ99956.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 493.4 bits (1269), Expect = 1.3e-135
Identity = 263/276 (95.29%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAILLT
Sbjct: 1   MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDA 122
           GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGKDA
Sbjct: 61  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGKDA 120

Query: 123 LNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKS 182
           LNKAK FDERLQ TSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQVTEKTKS
Sbjct: 121 LNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKS 180

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKKE 242
           ALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEKKE
Sbjct: 181 ALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKE 240

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           SIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 SIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of Sed0001432 vs. NCBI nr
Match: XP_022941588.1 (binding partner of ACD11 1-like isoform X3 [Cucurbita moschata] >KAG7030609.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 487.3 bits (1253), Expect = 9.0e-134
Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRE ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTVTG APNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DA+NKAK FDER QLTSNASATV S+DRKMGITEKITAGTAVVNEKV+E+DE FQV+EKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVE+AEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 129/232 (55.60%), Postives = 168/232 (72.41%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           +R+VKV N+S   +E DIKEFFSFSGE+  +++Q    N   AYVT+K++QGAETA+LL+
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ---SNEHSAYVTFKETQGAETAVLLS 64

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDA 122
           GA I D SV I L  NY  PP A  +  + + +       +AEDVVS+MLA+GFILGKDA
Sbjct: 65  GASIADQSVIIELAPNYS-PPAAPHA--ETQSSGAESVVQKAEDVVSSMLAKGFILGKDA 124

Query: 123 LNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKS 182
           + KAK FDE+   TS A+A VASLD+K+G+++K+TAGT++VNEK+K VD+ FQVTE+TKS
Sbjct: 125 VGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKS 184

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVE 235
             A AEQ  SSAG+A+M N YVLTG +W + A   V +AA EV Q TK KVE
Sbjct: 185 VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVE 230

[Close]

BLAST of Sed0001432 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.8e-07
Identity = 57/207 (27.54%), Postives = 96/207 (46.38%), Query Frame = 0


Query: 6   VKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLTGAK 65
           V V+NIS   +E+ I +FFSF G++  +  ++  E TQ A + ++     +TA+LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDAL 64

Query: 66  IGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAED----VVSTMLARGFILGKD 125
           +G   + IT  +         +S  D+       A  Q +     ++S +L+RG+ L   
Sbjct: 65  LGQNKIQITSEDG------GAASTTDQGGAGGDQAARQEDKPRSAIISELLSRGYHLSDV 124

Query: 126 ALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVN------EKVKEVDEMFQ 185
            L K+   D+   ++S          +  GI E   +G   VN      EK  EVD  F 
Sbjct: 125 TLEKSIQLDQSYGVSS----------KFKGILESALSGVRSVNERYHVTEKANEVDNKFA 184

Query: 186 VTEK---TKSALAVAEQKA--SSAGTA 198
           +++K   T S ++    KA  ++AGT+
Sbjct: 185 ISDKLNRTSSLVSTYFHKALETAAGTS 194

[Close]

BLAST of Sed0001432 vs. ExPASy TrEMBL
Match: A0A1S3BUX7 (binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493460 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.2e-137
Identity = 265/278 (95.32%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DALNKAK FDERLQ TSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQVTEKT
Sbjct: 121 DALNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. ExPASy TrEMBL
Match: A0A0A0KIR7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 265/278 (95.32%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DALNKAK FDERLQLTSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQV EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. ExPASy TrEMBL
Match: A0A5A7UTK1 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00920 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.1e-136
Identity = 263/276 (95.29%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAILLT
Sbjct: 1   MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDA 122
           GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGKDA
Sbjct: 61  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGKDA 120

Query: 123 LNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKS 182
           LNKAK FDERLQ TSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQVTEKTKS
Sbjct: 121 LNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKS 180

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKKE 242
           ALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEKKE
Sbjct: 181 ALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKE 240

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           SIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 SIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of Sed0001432 vs. ExPASy TrEMBL
Match: A0A1S3BT66 (binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493460 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.1e-136
Identity = 263/276 (95.29%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGA+TAILLT
Sbjct: 1   MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDA 122
           GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLA+GFILGKDA
Sbjct: 61  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGKDA 120

Query: 123 LNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKS 182
           LNKAK FDERLQ TSNASATVAS+DRKMGITEKITAGTAVVNEKV+E+DEMFQVTEKTKS
Sbjct: 121 LNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKS 180

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKKE 242
           ALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVE+AEEEKKE
Sbjct: 181 ALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKE 240

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           SIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 SIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of Sed0001432 vs. ExPASy TrEMBL
Match: A0A6J1FSI4 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446898 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.4e-134
Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSMRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRE ENTQVAYVTYKDSQGA+TAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGK 120
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTVTG APNQAEDVVSTMLA+GFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 121 DALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKT 180
           DA+NKAK FDER QLTSNASATV S+DRKMGITEKITAGTAVVNEKV+E+DE FQV+EKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 181 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEK 240
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVE+AEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 279
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Sed0001432 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-71
Identity = 150/270 (55.56%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           MSM TVKVSN+S   +ERD+KEFFSFSG+I Y+E Q EN+ +++AYVT+KD QGAETA+L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP--------NQAEDVVSTML 120
           LTG+ I D SVT+T+  +Y LPP+A++SI   +++    +P         +AEDVVS M+
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMI 120

Query: 121 ARGFILGKDALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDE 180
           ++GF+LGKDA+ KAK  DE+ QLTS ASA V S D+++G TEKI  GT VV+EKVKEVD+
Sbjct: 121 SKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQ 180

Query: 181 MFQVTEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAK 240
            FQVTEKTKSA+A AEQ  S+AG+A+M N YVLTGA W + A   V+KAAEEV Q  K K
Sbjct: 181 KFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEK 240

Query: 241 VERAEEEKKESIYRERTGIINNFAELHLDE 263
           V  AEEE++     E+  +++  A +HL E
Sbjct: 241 VGLAEEEEE-----EKKKVVDEVAIVHLTE 265

[Close]

BLAST of Sed0001432 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-70
Identity = 150/266 (56.39%), Postives = 192/266 (72.18%), Query Frame = 0


Query: 1   MSMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAIL 60
           M+M TVKVSN+S   ++RD+KEFFSFSG+ILY+E Q E E T++AYVT+KD QGAETA+L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN----QAEDVVSTMLARGF 120
           L+GA I D SV +++  +Y L PEA++S+  K    +  A +    +AEDVVS+MLA+GF
Sbjct: 61  LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120

Query: 121 ILGKDALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQV 180
           ILGKDA+ KAK  DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKV+EVD+ +QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180

Query: 181 TEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERA 240
           +EKTKSA+A AEQ  S+AG+A+M N YVLTGA W + A   V KAAEEV Q  K KV  A
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240

Query: 241 EEEKKESIYRERTGIINNFAELHLDE 263
           EEE K         +++ FA +HL E
Sbjct: 241 EEEDKRK-------VVDEFARVHLSE 259

[Close]

BLAST of Sed0001432 vs. TAIR 10
Match: AT1G67950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-69
Identity = 151/271 (55.72%), Postives = 192/271 (70.85%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ E + +QVAYVT+KDSQGAETA+LLT
Sbjct: 28  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 87

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDA 122
           GA I DL V+IT   NY LPPEA++  LD   +  G +  +AEDVV+ M+ RG+ LGKDA
Sbjct: 88  GAVIADLRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDA 147

Query: 123 LNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKS 182
           + KAK FD+R  L SNASAT+ASLD KMG++EK++ GT VVNEK++++DE +QV E TKS
Sbjct: 148 MEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKS 207

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKKE 242
           ALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE
Sbjct: 208 ALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKE 267

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPV 274
            I               LD   P  PA+VPV
Sbjct: 268 II--------------TLDPSSPKVPAVVPV 275

[Close]

BLAST of Sed0001432 vs. TAIR 10
Match: AT1G67950.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-69
Identity = 151/271 (55.72%), Postives = 192/271 (70.85%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ E + +QVAYVT+KDSQGAETA+LLT
Sbjct: 29  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 88

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLARGFILGKDA 122
           GA I DL V+IT   NY LPPEA++  LD   +  G +  +AEDVV+ M+ RG+ LGKDA
Sbjct: 89  GAVIADLRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDA 148

Query: 123 LNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTKS 182
           + KAK FD+R  L SNASAT+ASLD KMG++EK++ GT VVNEK++++DE +QV E TKS
Sbjct: 149 MEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKS 208

Query: 183 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKKE 242
           ALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE
Sbjct: 209 ALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKE 268

Query: 243 SIYRERTGIINNFAELHLDEPLPGEPAIVPV 274
            I               LD   P  PA+VPV
Sbjct: 269 II--------------TLDPSSPKVPAVVPV 276

[Close]

BLAST of Sed0001432 vs. TAIR 10
Match: AT1G67950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-68
Identity = 151/272 (55.51%), Postives = 194/272 (71.32%), Query Frame = 0


Query: 3   MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRENENTQVAYVTYKDSQGAETAILLT 62
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ E + +QVAYVT+KDSQGAETA+LLT
Sbjct: 28  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 87

Query: 63  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVTGIAPNQAEDVVSTMLARGFILGKD 122
           GA I DL V+IT   NY LPPEA++  LD ++ +  G +  +AEDVV+ M+ RG+ LGKD
Sbjct: 88  GAVIADLRVSITPAVNYQLPPEALA--LDSQEHSFNGFSVKKAEDVVNIMVGRGYALGKD 147

Query: 123 ALNKAKVFDERLQLTSNASATVASLDRKMGITEKITAGTAVVNEKVKEVDEMFQVTEKTK 182
           A+ KAK FD+R  L SNASAT+ASLD KMG++EK++ GT VVNEK++++DE +QV E TK
Sbjct: 148 AMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITK 207

Query: 183 SALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVERAEEEKK 242
           SALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +K
Sbjct: 208 SALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRK 267

Query: 243 ESIYRERTGIINNFAELHLDEPLPGEPAIVPV 274
           E I               LD   P  PA+VPV
Sbjct: 268 EII--------------TLDPSSPKVPAVVPV 276

The following BLAST results are available for this feature:

BLAST of Sed0001432 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452423.1	1.5e-136	95.32	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]
XP_038891484.1	1.5e-136	95.32	binding partner of ACD11 1 [Benincasa hispida]	[more]
XP_004142266.1	2.5e-136	95.32	binding partner of ACD11 1 [Cucumis sativus] >KGN49610.1 hypothetical protein Cs...	[more]
XP_008452424.1	1.3e-135	95.29	PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo] >KAA0056831...	[more]
XP_022941588.1	9.0e-134	93.88	binding partner of ACD11 1-like isoform X3 [Cucurbita moschata] >KAG7030609.1 Bi...	[more]

BLAST of Sed0001432 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.9e-57	55.60	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	8.8e-07	27.54	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Sed0001432 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUX7	7.2e-137	95.32	binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034934...	[more]
A0A0A0KIR7	1.2e-136	95.32	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV...	[more]
A0A5A7UTK1	6.1e-136	95.29	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BT66	6.1e-136	95.29	binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034934...	[more]
A0A6J1FSI4	4.4e-134	93.88	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Sed0001432 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46870.1	2.3e-71	55.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	1.5e-70	56.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.1	1.3e-69	55.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.2	1.3e-69	55.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.3	1.4e-68	55.51	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 219..239
None	No IPR available	PANTHER	PTHR32343:SF29	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 2..277
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 2..277
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 1.6E-9 score: 47.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 7..68 e-value: 9.9E-9 score: 34.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 11.963396
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..74 e-value: 1.3E-12 score: 49.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001432.1	Sed0001432.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding