Sed0001260 (gene) Chayote v1

Overview


Name	Sed0001260
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dof zinc finger protein DOF1.4-like
Location	LG14: 23103815 .. 23104997 (-)
RNA-Seq Expression	Sed0001260
Synteny	Sed0001260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAATATCTGCTTCTATTCTCTTACTTACCCTAATTATTCAACATCTTAAAGTCTCCCTCCTTCTATCTCTTTGCTTTTGAATCTCTTTTAAATGATAAAAAGGGTTCATCCCTAATGGCTTCAGCTTCTACGATTACGGACAAACTCGAACAACAACGACGACGACAACAACTACAATCGCCGCCTACTTTAAAGTGCCCTCGATGTGATTCTTCAAACACCAAATTTTGTTATTACAACAACTACAGCCTCTCTCAACCAAGGCACTTCTGCAAGGCTTGTAAACGCTACTGGACTCGCGGTGGAACCCTAAGAAACGTCCCCGTGGGCGGCGCCTGCCGTAAGAACAAGCGCCACAAGACTTCCTCTTCCTCAATAGCATCAACTCCAAGTCAAAACCCTAGCCTTCTCAACTCCATCAATAGTACTTTCCCTATGATTTTTGGGGTACATAGCCCTAACCCATCTGACAGTTTAGGGTTTTCTTCTTCTGCCCTATTTCAATCCCACATCAGTGATCTCCGCGAAGGGTTCGATTCCGCTAAGCAAATTAAAGGTATTTTACATGATTCAAATCACGTTTTTCATCCCATGATCTCGTTCGACCGAATCTCGCAGCTTTCGGATAATTTTGAAACTAGTTTTGCGACGCCAAGGAAGGAAGTGAAGATGGATGACATGAACAGGTTTGATTGTATAACCGTTAAACTCAAAAGCTTAAGCTAATAATCATATATTTAATCATTTATTCCTATTCTTAACAGGTTGGAGCAAATCGATATGTCGAATTTCTCCATCCCTTCTCATTATTGGAACTCGGGAACGACGGAGATGGGGAATTGGCCTGATTCGACTAATACGGGTTCTCAATGTCGAATTTCTAGAGTATTTGCATTGTATTAGCTGATAAAAAGGGGGGAAAAGACAAAGATTAAAGTTAGAGGAAATTAAATGATAAGAGGTATGATTGAATAATATAGAGTTACATCTCAAAATTACTAATTGATGAAGAGAGAAGTAGTTGACCTATCTTACTATACTAGAAAATTAGCTCTTCACGTTTTCAGTGCGGGATAATGTAGGATCCTCACCAATTTTTTTAATTTTCTTTTTTCTGTTTTCTTAAGGGTATAGGAACATAGGGAGATTTGTCATTGCAATGGTGATGAGAATTAATTAAA

mRNA sequence

CAGAATATCTGCTTCTATTCTCTTACTTACCCTAATTATTCAACATCTTAAAGTCTCCCTCCTTCTATCTCTTTGCTTTTGAATCTCTTTTAAATGATAAAAAGGGTTCATCCCTAATGGCTTCAGCTTCTACGATTACGGACAAACTCGAACAACAACGACGACGACAACAACTACAATCGCCGCCTACTTTAAAGTGCCCTCGATGTGATTCTTCAAACACCAAATTTTGTTATTACAACAACTACAGCCTCTCTCAACCAAGGCACTTCTGCAAGGCTTGTAAACGCTACTGGACTCGCGGTGGAACCCTAAGAAACGTCCCCGTGGGCGGCGCCTGCCGTAAGAACAAGCGCCACAAGACTTCCTCTTCCTCAATAGCATCAACTCCAAGTCAAAACCCTAGCCTTCTCAACTCCATCAATAGTACTTTCCCTATGATTTTTGGGGTACATAGCCCTAACCCATCTGACAGTTTAGGGTTTTCTTCTTCTGCCCTATTTCAATCCCACATCAGTGATCTCCGCGAAGGGTTCGATTCCGCTAAGCAAATTAAAGGTATTTTACATGATTCAAATCACGTTTTTCATCCCATGATCTCGTTCGACCGAATCTCGCAGCTTTCGGATAATTTTGAAACTAGTTTTGCGACGCCAAGGAAGGAAGTGAAGATGGATGACATGAACAGGTTGGAGCAAATCGATATGTCGAATTTCTCCATCCCTTCTCATTATTGGAACTCGGGAACGACGGAGATGGGGAATTGGCCTGATTCGACTAATACGGGTTCTCAATGTCGAATTTCTAGAGTATTTGCATTGTATTAGCTGATAAAAAGGGGGGAAAAGACAAAGATTAAAGTTAGAGGAAATTAAATGATAAGAGGTATGATTGAATAATATAGAGTTACATCTCAAAATTACTAATTGATGAAGAGAGAAGTAGTTGACCTATCTTACTATACTAGAAAATTAGCTCTTCACGTTTTCAGTGCGGGATAATGTAGGATCCTCACCAATTTTTTTAATTTTCTTTTTTCTGTTTTCTTAAGGGTATAGGAACATAGGGAGATTTGTCATTGCAATGGTGATGAGAATTAATTAAA

Coding sequence (CDS)

ATGGCTTCAGCTTCTACGATTACGGACAAACTCGAACAACAACGACGACGACAACAACTACAATCGCCGCCTACTTTAAAGTGCCCTCGATGTGATTCTTCAAACACCAAATTTTGTTATTACAACAACTACAGCCTCTCTCAACCAAGGCACTTCTGCAAGGCTTGTAAACGCTACTGGACTCGCGGTGGAACCCTAAGAAACGTCCCCGTGGGCGGCGCCTGCCGTAAGAACAAGCGCCACAAGACTTCCTCTTCCTCAATAGCATCAACTCCAAGTCAAAACCCTAGCCTTCTCAACTCCATCAATAGTACTTTCCCTATGATTTTTGGGGTACATAGCCCTAACCCATCTGACAGTTTAGGGTTTTCTTCTTCTGCCCTATTTCAATCCCACATCAGTGATCTCCGCGAAGGGTTCGATTCCGCTAAGCAAATTAAAGGTATTTTACATGATTCAAATCACGTTTTTCATCCCATGATCTCGTTCGACCGAATCTCGCAGCTTTCGGATAATTTTGAAACTAGTTTTGCGACGCCAAGGAAGGAAGTGAAGATGGATGACATGAACAGGTTGGAGCAAATCGATATGTCGAATTTCTCCATCCCTTCTCATTATTGGAACTCGGGAACGACGGAGATGGGGAATTGGCCTGATTCGACTAATACGGGTTCTCAATGTCGAATTTCTAGAGTATTTGCATTGTATTAG

Protein sequence

MASASTITDKLEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGACRKNKRHKTSSSSIASTPSQNPSLLNSINSTFPMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSNHVFHPMISFDRISQLSDNFETSFATPRKEVKMDDMNRLEQIDMSNFSIPSHYWNSGTTEMGNWPDSTNTGSQCRISRVFALY

Homology

[Close]

BLAST of Sed0001260 vs. NCBI nr
Match: XP_023518732.1 (dof zinc finger protein DOF1.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.5 bits (724), Expect = 1.7e-72
Identity = 161/256 (62.89%), Postives = 174/256 (67.97%), Query Frame = 0


Query: 1   MASASTITDKLEQ-----QRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKA 60
           MAS S I DK  Q     QRR+QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKA
Sbjct: 1   MASPSPIMDKPRQQQQQLQRRQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKA 60

Query: 61  CKRYWTRGGTLRNVPVGGACRKNKRHKTSSSSIA--------STPSQNPSLLNSINSTF- 120
           CKRYWTRGGTLRNVPVGG CRKNKR K SSSS +        STPSQNPS LNSIN+T  
Sbjct: 61  CKRYWTRGGTLRNVPVGGGCRKNKRLKVSSSSSSSSVNGTSTSTPSQNPSFLNSINATTA 120

Query: 121 ------------PMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSN 180
                       PM FG  +      LGFSSS  F SHI DLREGF+SAKQI+ I  +SN
Sbjct: 121 NISSSASTHINNPMFFGFDA--IGGGLGFSSSG-FLSHIGDLREGFNSAKQIQDISLNSN 180

Query: 181 HVFHPMISFDRISQLSDNFETSFATPRKEVKMDDMNRL-----EQIDMSNFSIPSHYWNS 226
           H  HP ISFDR SQ S NFE +   P KEVKM+ +NRL     EQ+D+SNFS PSH+WNS
Sbjct: 181 HFHHPTISFDRNSQFSGNFEANLTMPMKEVKMEGLNRLRQNHTEQVDLSNFSDPSHFWNS 240

[Close]

BLAST of Sed0001260 vs. NCBI nr
Match: KAG7026566.1 (Dof zinc finger protein PBF, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.6 bits (719), Expect = 6.4e-72
Identity = 165/281 (58.72%), Postives = 178/281 (63.35%), Query Frame = 0


Query: 1   MASASTITDK-LEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60
           MAS S I DK  +QQRR+QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY
Sbjct: 1   MASPSPIMDKPCQQQRRQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60

Query: 61  WTRGGTLRNVPVGGACRKNKRHKTSSSS---------IASTPSQNPSLLNSINSTF---- 120
           WTRGGTLRNVPVGG CRKNKR K SSSS           STPSQNPS LNSIN+T     
Sbjct: 61  WTRGGTLRNVPVGGGCRKNKRLKVSSSSSNSSSVNGTSTSTPSQNPSFLNSINATTANIS 120

Query: 121 ---------PMIFGVHSPNPS---------------------------DSLGFSSSALFQ 180
                    PM FGVH+ NPS                             LGFSS   F 
Sbjct: 121 SSASTHINNPMFFGVHTTNPSPLNLQFSNLDSVSAVLNVSPPQFDAIGGGLGFSSPG-FL 180

Query: 181 SHISDLREGFDSAKQIKGILHDSNHVFHPMISFDRISQLSDNFETSFA-TPRKEVKMDDM 226
           SHI DLR+GF+ AKQI+ I  +SNH  HP ISFDR SQLS NFE S    P KEVKM+ +
Sbjct: 181 SHIGDLRDGFNPAKQIQDISLNSNHFHHPTISFDRNSQLSGNFEASLTMPPMKEVKMEGL 240

[Close]

BLAST of Sed0001260 vs. NCBI nr
Match: XP_023004046.1 (dof zinc finger protein DOF1.4-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 4.1e-71
Identity = 158/252 (62.70%), Postives = 172/252 (68.25%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60
           MAS S I   +E+ R++QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW
Sbjct: 1   MASPSPI---MEKPRQQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60

Query: 61  TRGGTLRNVPVGGACRKNKRHKTSSSS---------IASTPSQNPSLLNSINSTF----- 120
           TRGGTLRNVPVGG CRKNKR K SSSS           STPSQNPS LNSIN+T      
Sbjct: 61  TRGGTLRNVPVGGGCRKNKRLKVSSSSNSSSSVNGTSTSTPSQNPSFLNSINATTANISS 120

Query: 121 --------PMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSNHVFH 180
                   PM FG  +      LGFSSS  F SHI DLREGF+SAKQI+ I  +SNH  H
Sbjct: 121 SASTHINNPMFFGFDA--IGSGLGFSSSG-FLSHIGDLREGFNSAKQIQDISLNSNHFHH 180

Query: 181 PMISFDRISQLSDNFETSFATPRKEVKMDDMNRL-----EQIDMSNFSIPSHYWNSGTTE 226
           P ISFDR SQLS NFE S   P KEVKM+ +NRL     EQ+D+SNFS PSH+WNS T  
Sbjct: 181 PTISFDRNSQLSGNFEASLTMPMKEVKMEGLNRLRQNHTEQVDLSNFSDPSHFWNSTTAA 240

[Close]

BLAST of Sed0001260 vs. NCBI nr
Match: KAG6594595.1 (Dof zinc finger protein PBF, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.7 bits (709), Expect = 9.2e-71
Identity = 160/256 (62.50%), Postives = 173/256 (67.58%), Query Frame = 0


Query: 1   MASASTITDK---LEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACK 60
           MAS S I DK    +QQRR+QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACK
Sbjct: 1   MASPSPIMDKPRQQQQQRRQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACK 60

Query: 61  RYWTRGGTLRNVPVGGACRKNKRHKTSSSS---------IASTPSQNPSLLNSINSTF-- 120
           RYWTRGGTLRNVPVGG CRKNKR K SSSS           STPSQNPS LNSIN+T   
Sbjct: 61  RYWTRGGTLRNVPVGGGCRKNKRLKVSSSSSNSSSVNGTSTSTPSQNPSFLNSINATTAN 120

Query: 121 -----------PMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSNH 180
                      PM FG  +      LGFSS   F SHI DLR+GF+ AKQI+ I  +SNH
Sbjct: 121 ISSSASTHINNPMFFGFDA--IGGGLGFSSPG-FLSHIGDLRDGFNPAKQIQDISLNSNH 180

Query: 181 VFHPMISFDRISQLSDNFETSFA-TPRKEVKMDDMNRL-----EQIDMSNFSIPSHYWNS 226
             HP ISFDR SQLS NFE S    P KEVKM+ +NRL     EQ+D+SNFS PSH+WNS
Sbjct: 181 FHHPTISFDRNSQLSGNFEASLTMPPMKEVKMEGLNRLRQNHTEQVDLSNFSDPSHFWNS 240

[Close]

BLAST of Sed0001260 vs. NCBI nr
Match: XP_022926924.1 (dof zinc finger protein DOF1.4-like [Cucurbita moschata])

HSP 1 Score: 276.9 bits (707), Expect = 1.6e-70
Identity = 159/255 (62.35%), Postives = 172/255 (67.45%), Query Frame = 0


Query: 1   MASASTITDK--LEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKR 60
           MAS S I DK   +QQRR+QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKR
Sbjct: 1   MASPSPIMDKPRQQQQRRQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKR 60

Query: 61  YWTRGGTLRNVPVGGACRKNKRHKTSSSS---------IASTPSQNPSLLNSINSTF--- 120
           YWTRGGTLRNVPVGG CRKNKR K SSSS           STPSQNPS LNSIN+T    
Sbjct: 61  YWTRGGTLRNVPVGGGCRKNKRLKVSSSSSNSSSVNGTSTSTPSQNPSFLNSINATTANI 120

Query: 121 ----------PMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSNHV 180
                     PM FG  +      LGFSS   F SHI DLR+GF+ AKQI+ I  +SNH 
Sbjct: 121 SSSASTHINNPMFFGFDA--IGGGLGFSSPG-FLSHIGDLRDGFNPAKQIQDISLNSNHF 180

Query: 181 FHPMISFDRISQLSDNFETSFA-TPRKEVKMDDMNRL-----EQIDMSNFSIPSHYWNSG 226
            HP ISFDR SQLS NFE S    P KE KM+ +NRL     EQ+D+SNFS PSH+WNS 
Sbjct: 181 HHPTISFDRNSQLSSNFEASLTMPPMKEAKMEGLNRLRQNHTEQVDLSNFSDPSHFWNST 240

[Close]

BLAST of Sed0001260 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-30
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSP-PTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60
           M S + I     QQ+++QQ Q P P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY
Sbjct: 1   MQSKNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60

Query: 61  WTRGGTLRNVPVGGACRKNKRHK-------TSSSSIASTPSQNPSLLNSIN-----STFP 120
           WTRGGTLRNVPVGG+ RKNKR K       T++S++++T S +P+  + I+     +  P
Sbjct: 61  WTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHP 120

Query: 121 MIFGV--HSPNPSDSLGFSSSALFQSHISDLREGFDS 143
           + +G+  H  + +++L    S    S  +    G +S
Sbjct: 121 LFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGLES 157

[Close]

BLAST of Sed0001260 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.5e-28
Identity = 67/115 (58.26%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 16  RRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGAC 75
           R+ + Q P  LKCPRCDS+NTKFCYYNNYS+SQPR+FCKAC+RYWT GGTLRNVP+GG C
Sbjct: 50  RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGC 109

Query: 76  RKNKR-------HKTSSSSIAS----TPSQNPSLLN-SINSTFPMIFGVHSPNPS 119
           RKNK          TSSSS A+    +PS N S  N SIN    M+  +  P P+
Sbjct: 110 RKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPTPT 164

[Close]

BLAST of Sed0001260 vs. ExPASy Swiss-Prot
Match: Q9ZV33 (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 7.7e-28
Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 5   STITDKLEQQRRRQQLQSPP--TLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 64
           S++  +  ++ R  +   PP   LKCPRCDS+NTKFCY+NNY+L+QPRHFCKAC+RYWTR
Sbjct: 71  SSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTR 130

Query: 65  GGTLRNVPVGGACRKNKRHKTSSSSIASTPSQNPSLLNSINSTFP 108
           GG LRNVPVGG CR+NK+ K S +S +S+ SQN    + +N+T P
Sbjct: 131 GGALRNVPVGGGCRRNKKGK-SGNSKSSSSSQNKQSTSMVNATSP 174

[Close]

BLAST of Sed0001260 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 6.5e-27
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 12 EQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPV 71
          +QQ+++ Q      LKCPRCDS NTKFCYYNNY+LSQPRHFCK+C+RYWT+GG LRNVPV
Sbjct: 15 QQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPV 74

Query: 72 GGACRKN-KRHKTSSSSIASTPSQN 96
          GG  RKN  +  TSSSS AS+PS +
Sbjct: 75 GGGSRKNATKRSTSSSSSASSPSNS 99

[Close]

BLAST of Sed0001260 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 23  PP--TLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGACRKNKR 82
           PP   L+CPRCDS+NTKFCYYNNYSL+QPR+FCK+C+RYWT+GGTLRN+PVGG CRKNKR
Sbjct: 50  PPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKR 109

Query: 83  HKTSSS-SIASTP------------------SQNPSLLNSINSTFPMIFGVHSPNPSDSL 142
             +S++ S+ +TP                  S N  +   ++  F ++   H P  S  L
Sbjct: 110 STSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHI--DLSLAFALLNKQH-PGSSSQL 169

Query: 143 GFSSSALFQSHISDLREGFDSAKQ 146
           GF S  L  SH SD+   F +++Q
Sbjct: 170 GFHSE-LGSSHQSDMEGMFGTSQQ 189

[Close]

BLAST of Sed0001260 vs. ExPASy TrEMBL
Match: A0A6J1KR08 (dof zinc finger protein DOF1.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497470 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.0e-71
Identity = 158/252 (62.70%), Postives = 172/252 (68.25%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60
           MAS S I   +E+ R++QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW
Sbjct: 1   MASPSPI---MEKPRQQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60

Query: 61  TRGGTLRNVPVGGACRKNKRHKTSSSS---------IASTPSQNPSLLNSINSTF----- 120
           TRGGTLRNVPVGG CRKNKR K SSSS           STPSQNPS LNSIN+T      
Sbjct: 61  TRGGTLRNVPVGGGCRKNKRLKVSSSSNSSSSVNGTSTSTPSQNPSFLNSINATTANISS 120

Query: 121 --------PMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSNHVFH 180
                   PM FG  +      LGFSSS  F SHI DLREGF+SAKQI+ I  +SNH  H
Sbjct: 121 SASTHINNPMFFGFDA--IGSGLGFSSSG-FLSHIGDLREGFNSAKQIQDISLNSNHFHH 180

Query: 181 PMISFDRISQLSDNFETSFATPRKEVKMDDMNRL-----EQIDMSNFSIPSHYWNSGTTE 226
           P ISFDR SQLS NFE S   P KEVKM+ +NRL     EQ+D+SNFS PSH+WNS T  
Sbjct: 181 PTISFDRNSQLSGNFEASLTMPMKEVKMEGLNRLRQNHTEQVDLSNFSDPSHFWNSTTAA 240

[Close]

BLAST of Sed0001260 vs. ExPASy TrEMBL
Match: A0A6J1EGJ0 (dof zinc finger protein DOF1.4-like OS=Cucurbita moschata OX=3662 GN=LOC111433895 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.6e-71
Identity = 159/255 (62.35%), Postives = 172/255 (67.45%), Query Frame = 0


Query: 1   MASASTITDK--LEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKR 60
           MAS S I DK   +QQRR+QQ   PP LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKR
Sbjct: 1   MASPSPIMDKPRQQQQRRQQQPPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKR 60

Query: 61  YWTRGGTLRNVPVGGACRKNKRHKTSSSS---------IASTPSQNPSLLNSINSTF--- 120
           YWTRGGTLRNVPVGG CRKNKR K SSSS           STPSQNPS LNSIN+T    
Sbjct: 61  YWTRGGTLRNVPVGGGCRKNKRLKVSSSSSNSSSVNGTSTSTPSQNPSFLNSINATTANI 120

Query: 121 ----------PMIFGVHSPNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDSNHV 180
                     PM FG  +      LGFSS   F SHI DLR+GF+ AKQI+ I  +SNH 
Sbjct: 121 SSSASTHINNPMFFGFDA--IGGGLGFSSPG-FLSHIGDLRDGFNPAKQIQDISLNSNHF 180

Query: 181 FHPMISFDRISQLSDNFETSFA-TPRKEVKMDDMNRL-----EQIDMSNFSIPSHYWNSG 226
            HP ISFDR SQLS NFE S    P KE KM+ +NRL     EQ+D+SNFS PSH+WNS 
Sbjct: 181 HHPTISFDRNSQLSSNFEASLTMPPMKEAKMEGLNRLRQNHTEQVDLSNFSDPSHFWNST 240

[Close]

BLAST of Sed0001260 vs. ExPASy TrEMBL
Match: A0A6J1INW3 (dof zinc finger protein DOF1.4 OS=Cucurbita maxima OX=3661 GN=LOC111478610 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 8.7e-59
Identity = 141/259 (54.44%), Postives = 164/259 (63.32%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60
           MASAS I DK  Q++++Q     P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW
Sbjct: 1   MASASRIMDKPRQEQQQQPPPVAPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60

Query: 61  TRGGTLRNVPVGGACRKNKRHKTSSSSIA-------STPSQNPSL-LNSINS------TF 120
           TRGGTLRNVPVGG CRKNKR K+SSSS +       STP+Q P L  NSINS      + 
Sbjct: 61  TRGGTLRNVPVGGGCRKNKRLKSSSSSFSSVNATPTSTPTQKPRLHNNSINSATNIIPSS 120

Query: 121 PMIFGVHSPNPSD-SLGFSS-------------------SALFQSHISDLREGFDSAKQI 180
           PM FGVH+ NPS  +L FS+                     L  SHI+DLRE F+S KQI
Sbjct: 121 PMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPFDAIGCGLGFSHIADLRETFNSPKQI 180

Query: 181 KGILHDSNHVFHPMISFDRISQLSDNFETSFATPRKEVKMDDMNRLEQIDMSNFSIPSHY 226
           + I   + H   P ISFDR SQL  NFE      ++++     N+ EQ++ SNFS PS +
Sbjct: 181 QDISIHATHFHPPAISFDRNSQLFGNFEAGLM--KEDLNRLSHNQTEQVNPSNFSDPSRF 240

[Close]

BLAST of Sed0001260 vs. ExPASy TrEMBL
Match: A0A6J1EGC8 (dof zinc finger protein DOF1.4 OS=Cucurbita moschata OX=3662 GN=LOC111433122 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 6.2e-57
Identity = 141/266 (53.01%), Postives = 165/266 (62.03%), Query Frame = 0


Query: 1   MASASTITDK-LEQQRRRQQLQSPP---TLKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASAS I DK  ++Q+++QQ Q PP    LKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGACRKNKRHKTSSSSI--------ASTPSQNP-----SLLNSIN 120
           KRYWTRGGTLRNVPVGG CRKNKR K+SSSS          STP+Q P     S++NS  
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120

Query: 121 STFP---MIFGVHSPNPSD-SLGFSS--------------------SALFQSHISDLREG 180
           +  P   M FGVH+ NPS  +L FS+                    S L  SHI DLRE 
Sbjct: 121 NIIPSSRMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180

Query: 181 FDSAKQIKGILHDSNHVFHPMISFDRISQLSDNFETSFATPRKEVKMDDMNRLEQIDMSN 226
           F+S K+I+ I   + H   P ISFDR SQL  NFE      ++++     N+ EQ+D SN
Sbjct: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLM--KEDLNRLSHNQTEQVDPSN 240

[Close]

BLAST of Sed0001260 vs. ExPASy TrEMBL
Match: A0A5A7UBU9 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007570 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 141/256 (55.08%), Postives = 157/256 (61.33%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60
           MAS+S I DK   +  +QQ  S  TLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW
Sbjct: 1   MASSSRIMDK--PRHHQQQQSSSGTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 60

Query: 61  TRGGTLRNVPVGGACRKNKRHKTSSSSIA---------STPSQNPSLL--NSINST---- 120
           TRGGTLRNVPVGG CRKNKR KTSSSS +         STPSQNP LL   SINST    
Sbjct: 61  TRGGTLRNVPVGGGCRKNKRLKTSSSSSSSSLVNANSTSTPSQNPRLLLHTSINSTTAPN 120

Query: 121 -----------FPMIFGVHS-PNPSDSLGFSSSALFQSHISDLREGFDSAKQIKGILHDS 180
                        M FG+ S       LGFSSS L     +  ++ F           +S
Sbjct: 121 IVSSSALNHTNSSMFFGLDSIGGGGGGLGFSSSGLLSHFNNPHQQPF-----------NS 180

Query: 181 NHVFHPMISFDRISQLSDNFETSFATPRKEVKMDDMNRL-----EQIDMSNFSIPSH-YW 223
           NH  HP ISFDR S L  N + +  T  KE+K++D+NRL     EQID+SNFS PS  YW
Sbjct: 181 NHFHHPTISFDRNSHLLGNIDPNLMTSMKEIKIEDLNRLCQNQTEQIDLSNFSDPSSIYW 240

[Close]

BLAST of Sed0001260 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 134.8 bits (338), Expect = 9.0e-32
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSP-PTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60
           M S + I     QQ+++QQ Q P P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY
Sbjct: 1   MQSKNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60

Query: 61  WTRGGTLRNVPVGGACRKNKRHK-------TSSSSIASTPSQNPSLLNSIN-----STFP 120
           WTRGGTLRNVPVGG+ RKNKR K       T++S++++T S +P+  + I+     +  P
Sbjct: 61  WTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHP 120

Query: 121 MIFGV--HSPNPSDSLGFSSSALFQSHISDLREGFDS 143
           + +G+  H  + +++L    S    S  +    G +S
Sbjct: 121 LFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGLES 157

[Close]

BLAST of Sed0001260 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 134.8 bits (338), Expect = 9.0e-32
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 1   MASASTITDKLEQQRRRQQLQSP-PTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 60
           M S + I     QQ+++QQ Q P P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY
Sbjct: 15  MQSKNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRY 74

Query: 61  WTRGGTLRNVPVGGACRKNKRHK-------TSSSSIASTPSQNPSLLNSIN-----STFP 120
           WTRGGTLRNVPVGG+ RKNKR K       T++S++++T S +P+  + I+     +  P
Sbjct: 75  WTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHP 134

Query: 121 MIFGV--HSPNPSDSLGFSSSALFQSHISDLREGFDS 143
           + +G+  H  + +++L    S    S  +    G +S
Sbjct: 135 LFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGLES 171

[Close]

BLAST of Sed0001260 vs. TAIR 10
Match: AT2G28810.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.6 bits (314), Expect = 5.4e-29
Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 5   STITDKLEQQRRRQQLQSPP--TLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 64
           S++  +  ++ R  +   PP   LKCPRCDS+NTKFCY+NNY+L+QPRHFCKAC+RYWTR
Sbjct: 71  SSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTR 130

Query: 65  GGTLRNVPVGGACRKNKRHKTSSSSIASTPSQNPSLLNSINSTFP 108
           GG LRNVPVGG CR+NK+ K S +S +S+ SQN    + +N+T P
Sbjct: 131 GGALRNVPVGGGCRRNKKGK-SGNSKSSSSSQNKQSTSMVNATSP 174

[Close]

BLAST of Sed0001260 vs. TAIR 10
Match: AT2G28810.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.6 bits (314), Expect = 5.4e-29
Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 5   STITDKLEQQRRRQQLQSPP--TLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 64
           S++  +  ++ R  +   PP   LKCPRCDS+NTKFCY+NNY+L+QPRHFCKAC+RYWTR
Sbjct: 54  SSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTR 113

Query: 65  GGTLRNVPVGGACRKNKRHKTSSSSIASTPSQNPSLLNSINSTFP 108
           GG LRNVPVGG CR+NK+ K S +S +S+ SQN    + +N+T P
Sbjct: 114 GGALRNVPVGGGCRRNKKGK-SGNSKSSSSSQNKQSTSMVNATSP 157

[Close]

BLAST of Sed0001260 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 122.5 bits (306), Expect = 4.6e-28
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 12 EQQRRRQQLQSPPTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPV 71
          +QQ+++ Q      LKCPRCDS NTKFCYYNNY+LSQPRHFCK+C+RYWT+GG LRNVPV
Sbjct: 15 QQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPV 74

Query: 72 GGACRKN-KRHKTSSSSIASTPSQN 96
          GG  RKN  +  TSSSS AS+PS +
Sbjct: 75 GGGSRKNATKRSTSSSSSASSPSNS 99

The following BLAST results are available for this feature:

BLAST of Sed0001260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518732.1	1.7e-72	62.89	dof zinc finger protein DOF1.4-like [Cucurbita pepo subsp. pepo]	[more]
KAG7026566.1	6.4e-72	58.72	Dof zinc finger protein PBF, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023004046.1	4.1e-71	62.70	dof zinc finger protein DOF1.4-like [Cucurbita maxima]	[more]
KAG6594595.1	9.2e-71	62.50	Dof zinc finger protein PBF, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926924.1	1.6e-70	62.35	dof zinc finger protein DOF1.4-like [Cucurbita moschata]	[more]

BLAST of Sed0001260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZA4	1.3e-30	49.68	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
O24463	4.5e-28	58.26	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
Q9ZV33	7.7e-28	57.14	Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV...	[more]
Q94AR6	6.5e-27	67.06	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
Q84TE9	1.1e-26	47.92	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]

BLAST of Sed0001260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR08	2.0e-71	62.70	dof zinc finger protein DOF1.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497470 ...	[more]
A0A6J1EGJ0	7.6e-71	62.35	dof zinc finger protein DOF1.4-like OS=Cucurbita moschata OX=3662 GN=LOC11143389...	[more]
A0A6J1INW3	8.7e-59	54.44	dof zinc finger protein DOF1.4 OS=Cucurbita maxima OX=3661 GN=LOC111478610 PE=4 ...	[more]
A0A6J1EGC8	6.2e-57	53.01	dof zinc finger protein DOF1.4 OS=Cucurbita moschata OX=3662 GN=LOC111433122 PE=...	[more]
A0A5A7UBU9	1.7e-54	55.08	Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Sed0001260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28310.1	9.0e-32	49.68	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	9.0e-32	49.68	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28810.1	5.4e-29	57.14	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28810.2	5.4e-29	57.14	Dof-type zinc finger DNA-binding family protein	[more]
AT3G21270.1	4.6e-28	67.06	DOF zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 25..80 e-value: 2.8E-33 score: 113.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 28..64
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 26..80 score: 29.263968
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31992:SF227	DOF ZINC FINGER PROTEIN DOF2.4-LIKE	coord: 15..126
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 15..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001260.1	Sed0001260.1	mRNA
Sed0001260.2	Sed0001260.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding