
Sed0001082 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATTAATTCAAACCAAATGACAGAAAAAACCAGAAGAACCCCCAGAAAGGCAAAGGCCACTCATCTCTGCTTCCCACAGCTCAGAGCCGCCGGCAAGGTCCCGTCGCCGGCGACTCTTCTCGACCGCCTCCGCGAGGCCGTTTTTCGGTTCATCATGATATGCGCTCTCTCCAAAGCCCCAAGTCACCATCATCACGATGGCGCCGGAGATGGTTTCTCCGACGACGCCGTTAGGCGGCGAAACACTGACCACCACCACAGCGAAGCCGTCGCCGATTGCATTGAGTTCATTAAGACGAAGGCGTACTCGGACGACGTGACAGTTCACGGCGGCGGATCGATGGACGCCGATGCTGACGTGGCCATGCCGGAGCCGGTGTCTGGTTAACTAACGGCGGTGCAAGGGGGTCTAGACTAGTTGCTCCTCCAATTTGTGTTGAAATTAGTGTTTAGTTTTAGGATTTTTATAAATTAATTATGGGAAAGAAATTCGGAAATTCTACGTGGAAATGTGCCGATTTCGTTATATATATGTGGGGTATTTCCTTTTGTTATTTTAGATTGTCTCCTACTATCTAATTATCAAGTGTTATTGGGTCATATAATAG ATTCATTAATTCAAACCAAATGACAGAAAAAACCAGAAGAACCCCCAGAAAGGCAAAGGCCACTCATCTCTGCTTCCCACAGCTCAGAGCCGCCGGCAAGGTCCCGTCGCCGGCGACTCTTCTCGACCGCCTCCGCGAGGCCGTTTTTCGGTTCATCATGATATGCGCTCTCTCCAAAGCCCCAAGTCACCATCATCACGATGGCGCCGGAGATGGTTTCTCCGACGACGCCGTTAGGCGGCGAAACACTGACCACCACCACAGCGAAGCCGTCGCCGATTGCATTGAGTTCATTAAGACGAAGGCGTACTCGGACGACGTGACAGTTCACGGCGGCGGATCGATGGACGCCGATGCTGACGTGGCCATGCCGGAGCCGGTGTCTGGTTAACTAACGGCGGTGCAAGGGGGTCTAGACTAGTTGCTCCTCCAATTTGTGTTGAAATTAGTGTTTAGTTTTAGGATTTTTATAAATTAATTATGGGAAAGAAATTCGGAAATTCTACGTGGAAATGTGCCGATTTCGTTATATATATGTGGGGTATTTCCTTTTGTTATTTTAGATTGTCTCCTACTATCTAATTATCAAGTGTTATTGGGTCATATAATAG ATGACAGAAAAAACCAGAAGAACCCCCAGAAAGGCAAAGGCCACTCATCTCTGCTTCCCACAGCTCAGAGCCGCCGGCAAGGTCCCGTCGCCGGCGACTCTTCTCGACCGCCTCCGCGAGGCCGTTTTTCGGTTCATCATGATATGCGCTCTCTCCAAAGCCCCAAGTCACCATCATCACGATGGCGCCGGAGATGGTTTCTCCGACGACGCCGTTAGGCGGCGAAACACTGACCACCACCACAGCGAAGCCGTCGCCGATTGCATTGAGTTCATTAAGACGAAGGCGTACTCGGACGACGTGACAGTTCACGGCGGCGGATCGATGGACGCCGATGCTGACGTGGCCATGCCGGAGCCGGTGTCTGGTTAA MTEKTRRTPRKAKATHLCFPQLRAAGKVPSPATLLDRLREAVFRFIMICALSKAPSHHHHDGAGDGFSDDAVRRRNTDHHHSEAVADCIEFIKTKAYSDDVTVHGGGSMDADADVAMPEPVSG Homology
BLAST of Sed0001082 vs. NCBI nr
Match: KGN49339.2 (hypothetical protein Csa_003207 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 8.9e-25 Identity = 76/133 (57.14%), Postives = 87/133 (65.41%), Query Frame = 0
BLAST of Sed0001082 vs. NCBI nr
Match: KAG6603914.1 (hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24 Identity = 74/125 (59.20%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of Sed0001082 vs. NCBI nr
Match: KAA0025678.1 (Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK12553.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 2.7e-21 Identity = 67/111 (60.36%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of Sed0001082 vs. NCBI nr
Match: XP_016699008.1 (uncharacterized protein LOC107914579 [Gossypium hirsutum] >KAG4125348.1 hypothetical protein ERO13_D10G089800v2 [Gossypium hirsutum]) HSP 1 Score: 91.3 bits (225), Expect = 6.4e-15 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 0
BLAST of Sed0001082 vs. NCBI nr
Match: MBA0860583.1 (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 90.9 bits (224), Expect = 8.3e-15 Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Sed0001082 vs. ExPASy TrEMBL
Match: A0A0A0KGN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505880 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.3e-25 Identity = 76/133 (57.14%), Postives = 87/133 (65.41%), Query Frame = 0
BLAST of Sed0001082 vs. ExPASy TrEMBL
Match: A0A5A7SHP0 (Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001350 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21 Identity = 67/111 (60.36%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of Sed0001082 vs. ExPASy TrEMBL
Match: A0A1U8KDI1 (uncharacterized protein LOC107914579 OS=Gossypium hirsutum OX=3635 GN=LOC107914579 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.1e-15 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 0
BLAST of Sed0001082 vs. ExPASy TrEMBL
Match: A0A6J0ZL23 (LOW QUALITY PROTEIN: uncharacterized protein LOC110409788 OS=Herrania umbratica OX=108875 GN=LOC110409788 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15 Identity = 58/124 (46.77%), Postives = 74/124 (59.68%), Query Frame = 0
BLAST of Sed0001082 vs. ExPASy TrEMBL
Match: A0A5C7HUV3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015142 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15 Identity = 61/130 (46.92%), Postives = 74/130 (56.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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