Sed0000971 (gene) Chayote v1

Overview


Name	Sed0000971
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin
Location	LG01: 3926465 .. 3927201 (+)
RNA-Seq Expression	Sed0000971
Synteny	Sed0000971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCACTTAAATTCCCAAACCCCTAAAAAAAAAAAAACATTTCCATTAAATTTCCCTTTTGTGTGTGTAAATTGGCCCAGCCAGGATGCACCAAGCAATCCCATATCGATCATGGCAATCAATTTCAATGGACGCCAAGCCATTCGCTACCCGACCGTGGCGCGATGTCGGTGCATCCGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGCTGCTGTATGAGCCATGTGGTCAAGCGCCTGCTTCTCGGACTCGGCGCTAACCCTGCCGTTTACGAGGTCGACGAAGATCGAGAATCCGCTGTCGTTGGGGAATTAGAGGCTATCGCGCAATCGGGGAACGGGAAGGTGCAGCTGCCCGCGGTGTTTATTGGGGGAGCCTTGTTTGGGGGCTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAAGCTGGCGCTTTGTGGCTTTGAATTATTGCCTTATTATTATTATTATTATTGTTATTCCTTTCTTTTTGTTTATATTTATTTATTCTCCCCAATTTACAACGCTACACTTTTCTCAATCAATCCAATCGGGGGATTTTTTGTTGCTCAATTTAGGTTGTCAATTCACCGAATCCTTTTTCATTTTATCTAATTAGGAGTTCTAAATGGAATTATGAGTAATTACTGATCAGAATATTTATTAATAATATATACCAAACTGGAGTCTTTTTTTAAAAGATTTGG

mRNA sequence

TGCCCACTTAAATTCCCAAACCCCTAAAAAAAAAAAAACATTTCCATTAAATTTCCCTTTTGTGTGTGTAAATTGGCCCAGCCAGGATGCACCAAGCAATCCCATATCGATCATGGCAATCAATTTCAATGGACGCCAAGCCATTCGCTACCCGACCGTGGCGCGATGTCGGTGCATCCGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGCTGCTGTATGAGCCATGTGGTCAAGCGCCTGCTTCTCGGACTCGGCGCTAACCCTGCCGTTTACGAGGTCGACGAAGATCGAGAATCCGCTGTCGTTGGGGAATTAGAGGCTATCGCGCAATCGGGGAACGGGAAGGTGCAGCTGCCCGCGGTGTTTATTGGGGGAGCCTTGTTTGGGGGCTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAAGCTGGCGCTTTGTGGCTTTGAATTATTGCCTTATTATTATTATTATTATTGTTATTCCTTTCTTTTTGTTTATATTTATTTATTCTCCCCAATTTACAACGCTACACTTTTCTCAATCAATCCAATCGGGGGATTTTTTGTTGCTCAATTTAGGTTGTCAATTCACCGAATCCTTTTTCATTTTATCTAATTAGGAGTTCTAAATGGAATTATGAGTAATTACTGATCAGAATATTTATTAATAATATATACCAAACTGGAGTCTTTTTTTAAAAGATTTGG

Coding sequence (CDS)

ATGCACCAAGCAATCCCATATCGATCATGGCAATCAATTTCAATGGACGCCAAGCCATTCGCTACCCGACCGTGGCGCGATGTCGGTGCATCCGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGCTGCTGTATGAGCCATGTGGTCAAGCGCCTGCTTCTCGGACTCGGCGCTAACCCTGCCGTTTACGAGGTCGACGAAGATCGAGAATCCGCTGTCGTTGGGGAATTAGAGGCTATCGCGCAATCGGGGAACGGGAAGGTGCAGCTGCCCGCGGTGTTTATTGGGGGAGCCTTGTTTGGGGGCTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAAGCTGGCGCTTTGTGGCTTTGA

Protein sequence

MHQAIPYRSWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL

Homology

[Close]

BLAST of Sed0000971 vs. NCBI nr
Match: XP_038901995.1 (glutaredoxin-C9-like [Benincasa hispida])

HSP 1 Score: 201.8 bits (512), Expect = 3.5e-48
Identity = 109/145 (75.17%), Postives = 113/145 (77.93%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW---------------RDVGASVSESAAIVFARRG 60
           MHQAIPYRSWQSI       +TR PW                DV ASVSESAAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSTRPPWGGGSASATAEGGGSRSDVIASVSESAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGG 120
           CCMSHVVKRLLLGLGANPAVYEVDE+ ES VV ELEA A+S N K+QLPAVFIGG LFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVKLQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGDLVPILKQAGALWL 130
           LDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 LDRVMATHISGDLVPILKQAGALWL 145

[Close]

BLAST of Sed0000971 vs. NCBI nr
Match: XP_022947652.1 (glutaredoxin-C9-like [Cucurbita moschata])

HSP 1 Score: 201.1 bits (510), Expect = 6.0e-48
Identity = 106/131 (80.92%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MHQAIPYRS--WQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           M+QAIPYRS   +   + A    +  WRDV ASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLV 120
           GANPAVYEV+ED ES VV ELEAIAQ GNGKV+LPAVFIGGALFGGL+RVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 130
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

[Close]

BLAST of Sed0000971 vs. NCBI nr
Match: KAA0067472.1 (glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 109/148 (73.65%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGAL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES VV ELEA A+S N  +QLPAVFIGG L
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 130
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Sed0000971 vs. NCBI nr
Match: XP_022971131.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47
Identity = 105/131 (80.15%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MHQAIPYRS--WQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           M+QAIPYRS   +   +      +  WRDV ASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIGTKQSRVSVAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLV 120
           GANPAVYEV+ED ES VV ELEAIAQ GNGKV+LPAVFIGGALFGGL+RVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 130
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

[Close]

BLAST of Sed0000971 vs. NCBI nr
Match: XP_008455946.1 (PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47
Identity = 108/148 (72.97%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGAL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES V+ ELEA A+S N  +QLPAVFIGG L
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 130
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Sed0000971 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.1e-34
Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 32  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAI-AQSGNGKV 91
           V E+A IV  RRGCCM HVV+RLLLGLG NPAV E+DE+RE  V+ ELE I  Q G G V
Sbjct: 39  VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTV 98

Query: 92  QLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL 130
           +LPAV++GG LFGGLDRVMATHISG+LVPILK+ GALWL
Sbjct: 99  KLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Sed0000971 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29
Identity = 74/139 (53.24%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 1   MHQAIPY---RSWQSISMDAKPFATRP-------WRDVGASVSESAAIVFARRGCCMSHV 60
           M+QAIPY   R+W + S  A   A  P         +V  +V+E   +V  R GCC+SHV
Sbjct: 1   MYQAIPYNANRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPVVVVGRSGCCLSHV 60

Query: 61  VKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMA 120
           VKRLL GLG NPAV+EV  + E A V        +G G V LPAVF+GG L GGLDR+MA
Sbjct: 61  VKRLLQGLGVNPAVHEVAGEAELAGV-------VAGGGGVALPAVFVGGRLLGGLDRLMA 120

Query: 121 THISGDLVPILKQAGALWL 130
            HISG+LVPILK+AGALWL
Sbjct: 121 VHISGELVPILKEAGALWL 132

[Close]

BLAST of Sed0000971 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 62/118 (52.54%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 26  RDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVV--------- 85
           R+V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV +D + A +         
Sbjct: 19  REVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADPAALVDAALQARR 78

Query: 86  ----GELEAIAQSGNG-KVQLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL 130
               G+  A    G G  V  PAVFIGG L GGLDR+MA H++G+LVP+LKQAGALWL
Sbjct: 79  RKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVPVLKQAGALWL 136

[Close]

BLAST of Sed0000971 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 27  DVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSG 86
           +V  +V+ES  +V  RRGCC+ HVVKRLL GLG NPAV+EV      A    L+ +  +G
Sbjct: 51  EVRRAVAESPVLVVGRRGCCLIHVVKRLLQGLGVNPAVHEV------AGEAALKGVVPAG 110

Query: 87  NGKVQLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL 130
                LPAVF+GG L GGLDR+MA HISG+LVPILK+AGALWL
Sbjct: 111 GEAAALPAVFVGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of Sed0000971 vs. ExPASy Swiss-Prot
Match: Q7XIZ1 (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.0e-23
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 28  VGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQS-- 87
           V    S +A +VF+  GCCM HVVKRLLLGLG  PAVYE+D   + A   +++A      
Sbjct: 92  VARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELD---QLAAAADIQAALSQLL 151

Query: 88  GNGKVQLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL 130
             G+  +P VF+GG L GG+++VMA HI+G LVP+LKQAGALWL
Sbjct: 152 PPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGALWL 192

[Close]

BLAST of Sed0000971 vs. ExPASy TrEMBL
Match: A0A6J1G719 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48
Identity = 106/131 (80.92%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MHQAIPYRS--WQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           M+QAIPYRS   +   + A    +  WRDV ASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLV 120
           GANPAVYEV+ED ES VV ELEAIAQ GNGKV+LPAVFIGGALFGGL+RVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 130
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

[Close]

BLAST of Sed0000971 vs. ExPASy TrEMBL
Match: A0A5A7VGI4 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001510 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48
Identity = 109/148 (73.65%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGAL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES VV ELEA A+S N  +QLPAVFIGG L
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 130
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Sed0000971 vs. ExPASy TrEMBL
Match: A0A6J1I2G5 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111469896 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.5e-48
Identity = 105/131 (80.15%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MHQAIPYRS--WQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           M+QAIPYRS   +   +      +  WRDV ASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIGTKQSRVSVAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLV 120
           GANPAVYEV+ED ES VV ELEAIAQ GNGKV+LPAVFIGGALFGGL+RVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

Query: 121 PILKQAGALWL 130
           PILKQAGALWL
Sbjct: 121 PILKQAGALWL 131

[Close]

BLAST of Sed0000971 vs. ExPASy TrEMBL
Match: A0A5D3CE70 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00610 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 108/148 (72.97%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGAL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES V+ ELEA A+S N  +QLPAVFIGG L
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 130
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Sed0000971 vs. ExPASy TrEMBL
Match: A0A1S3C224 (glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 108/148 (72.97%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQLPAVFIGGAL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES V+ ELEA A+S N  +QLPAVFIGG L
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 130
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Sed0000971 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 3.6e-35
Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 32  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAI-AQSGNGKV 91
           V E+A IV  RRGCCM HVV+RLLLGLG NPAV E+DE+RE  V+ ELE I  Q G G V
Sbjct: 39  VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTV 98

Query: 92  QLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL 130
           +LPAV++GG LFGGLDRVMATHISG+LVPILK+ GALWL
Sbjct: 99  KLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Sed0000971 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23
Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 9   SWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVD 68
           SW + S   KP +    R     V E+A +VFARRGCC+ HV KRLLL  G NP V E+ 
Sbjct: 38  SWLT-SGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIG 97

Query: 69  EDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALW 128
           E+  +      + I    + K +LP ++IGG LFGGL+ +MA HI+GDLVP L+QAGALW
Sbjct: 98  EEDNN----NYDNIV---SDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALW 150

Query: 129 L 130
           L
Sbjct: 158 L 150

[Close]

BLAST of Sed0000971 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-21
Identity = 58/132 (43.94%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 9   SWQSISMDAKPF------ATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANP 68
           SW S  M +  F      A      + +  SESA ++F+   CCM H VK L  G+G +P
Sbjct: 7   SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSP 66

Query: 69  AVYEVD-----EDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDL 128
           AV+E+D      D + A++  L     S  G   LP VFIGG L G +DRVMA+HI+G L
Sbjct: 67  AVHELDLHPYGGDIQRALIRLLGCSGSSSPG--SLPVVFIGGKLVGAMDRVMASHINGSL 126

Query: 129 VPILKQAGALWL 130
           VP+LK AGALWL
Sbjct: 127 VPLLKDAGALWL 136

[Close]

BLAST of Sed0000971 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-20
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 32  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGNGKVQ 91
           +SE + ++F++  CCMSH +K L L LG NP +YE+DE      +    A+AQ G     
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIE--HALAQLGCSPT- 67

Query: 92  LPAVFIGGALFGGLDRVMATHISGDLVPILKQAGALWL 130
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Sed0000971 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 9.6e-20
Identity = 47/131 (35.88%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 4   AIPYRSWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPA 63
           ++ Y +   +  +   F +     + +  +E+A ++F+   CCM H +KRL  G+G +PA
Sbjct: 10  SLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPA 69

Query: 64  VYEVD-----EDRESAVVGELEAIAQSGNGKVQLPAVFIGGALFGGLDRVMATHISGDLV 123
           V+E+D      +   A++  L   +        LP VFIGG + G ++RVMA+HI+G LV
Sbjct: 70  VHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLV 129

Query: 124 PILKQAGALWL 130
           P+LK AGALWL
Sbjct: 130 PLLKDAGALWL 140

The following BLAST results are available for this feature:

BLAST of Sed0000971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901995.1	3.5e-48	75.17	glutaredoxin-C9-like [Benincasa hispida]	[more]
XP_022947652.1	6.0e-48	80.92	glutaredoxin-C9-like [Cucurbita moschata]	[more]
KAA0067472.1	1.0e-47	73.65	glutaredoxin-C9-like [Cucumis melo var. makuwa]	[more]
XP_022971131.1	1.3e-47	80.15	glutaredoxin-C9-like [Cucurbita maxima]	[more]
XP_008455946.1	2.3e-47	72.97	PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like ...	[more]

BLAST of Sed0000971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	5.1e-34	71.72	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	2.9e-29	53.24	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q0JP62	1.1e-25	52.54	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]
Q5QLR2	1.1e-25	58.25	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q7XIZ1	9.0e-23	52.88	Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1	[more]

BLAST of Sed0000971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G719	2.9e-48	80.92	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1	[more]
A0A5A7VGI4	4.9e-48	73.65	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G...	[more]
A0A6J1I2G5	6.5e-48	80.15	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111469896 PE=3 SV=1	[more]
A0A5D3CE70	1.1e-47	72.97	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757...	[more]
A0A1S3C224	1.1e-47	72.97	glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1	[more]

BLAST of Sed0000971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	3.6e-35	71.72	Thioredoxin superfamily protein	[more]
AT1G03850.2	1.9e-23	48.76	Glutaredoxin family protein	[more]
AT3G02000.1	6.6e-21	43.94	Thioredoxin superfamily protein	[more]
AT4G15700.1	3.3e-20	46.94	Thioredoxin superfamily protein	[more]
AT5G14070.1	9.6e-20	35.88	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 26..128 e-value: 5.5E-23 score: 82.8
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 26..129
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 25..128 score: 17.70513
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 36..120 e-value: 6.51751E-27 score: 93.7584
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 38..100 e-value: 9.6E-9 score: 35.3
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 31..129 e-value: 5.0E-37 score: 123.9
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 26..129
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 31..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000971.1	Sed0000971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity