Sed0000874 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGAGAGAGGAGGAAACATGGCAATGGCCCCTCTTCATCCATTTTAGATTAAGAAAAAGAAATTACAAATGCCAACTAGGAAAATGTCCTTTACAAAATGGTTGGCTTAGCCCCATATTCACGTGATTTGTTTTCTTATTTTCCTCACTATTCCTATATATATATATAACTCACTCTTCACTCTCACTTAAGTAATAACAATGGAGCCTTCAAAAATTAATTCCCTTCTCTTCATTTGCATGCTTTTCATCTCGACCACCGCTCCCGTTTTCGGGTGCGGTGGTTCTTGCGGCTCTCCCACAAGAAACAAACCCGGTTCCGGTTCAAAAGGCCCGATCGACCTCCCACCCGTCACCCTCCCTCCAGTGACGTTGCCACCGGTGACACTTCCACCGGTGGTCACAAACCCGTCTCCGTCTACGAAACAGCCCTGCCCGCCCTCGGGGCAAGAGACCTGCCCGATCGACACATTGAAATTGGGTGCATGTGTGGATCTGTTGGGGGGGCTGGTGCACATTGGGTTAGGGGACCCTACGGCTAATGAGTGCTGCCCTATACTTTCAGGGCTGGCTGAGGTGGAAGCCGCTGTGTGCCTTTGCACTACCCTTAAAATTAAGGCTCTTAGCCTTAATCTCTATGTTCCTATTGCCCTTCAGCTCCTTATTTCATGTGGAAAGACCCCTCCTCCTGGCTACACTTGTTCCCTTTAGAACATAACAGGTTAAATCTTTTTCTTCTTTTTTTTTAATTCAAAAATTTTGAGACTCAATTCTATTGACTATTTTTGACAAATCTTTTCTTTATTCTTTTTTCTCTTTAAGTATTTTTTCACTAATTGCAGTACTGGGTCTGCACTTTTATATATTTATATACACCACGGGATTACTTTCCCTTGTGAAAATTAGGTTTAAAGATTTTTTTTTAGTCTCTAGATTTTCCATTTTATATATATATCTCTTTTGTTAATATATTTTTTCTACTAATTGCATTGGATCTATACAGCTTCCCATGAAAAAAATTATTAGGCTTAAAGTTATTTGGCATTTAAGTATCTAGATTTTGCATAAATTATTTGGTTTAAAGTTTAAGATATTTGAAAATCTTACATAGAAGTTGCTATTTATATACTTAAGTATGTATTTATTAATTAAACAAAATATGTTTTTATATTTAGTTTGGAACTCCGGTCGATGACGCAATTAGTTATCTGATTTTACTTATTAAATTTTTGTTTTGTTTTTTTTTTTCAGGTTTGGGTATCAAATGGAGTCGACATGAGAGGATGTCGAGTCAAATCTTTGTGTCTCTCTTTTTCGATTTATTTTATTTTTGCTGAATGCAATTGGTGATGTTGTAAGCCATTTATTTTTCAGATTCTGATAATATTGTTGTTATGTGTTGTGCTATGGATTAGGCAACAGAAAGAAAAATCTCAGTTGCCTTTATGTTTTCATTTTTATATGCCTATCTCATTGATTTAGTCATTTTTAATTTGATCAACTCATAACTTTCTTATGAT GATGAGAGAGGAGGAAACATGGCAATGGCCCCTCTTCATCCATTTTAGATTAAGAAAAAGAAATTACAAATGCCAACTAGGAAAATGTCCTTTACAAAATGGTTGGCTTAGCCCCATATTCACGTGATTTGTTTTCTTATTTTCCTCACTATTCCTATATATATATATAACTCACTCTTCACTCTCACTTAAGTAATAACAATGGAGCCTTCAAAAATTAATTCCCTTCTCTTCATTTGCATGCTTTTCATCTCGACCACCGCTCCCGTTTTCGGGTGCGGTGGTTCTTGCGGCTCTCCCACAAGAAACAAACCCGGTTCCGGTTCAAAAGGCCCGATCGACCTCCCACCCGTCACCCTCCCTCCAGTGACGTTGCCACCGGTGACACTTCCACCGGTGGTCACAAACCCGTCTCCGTCTACGAAACAGCCCTGCCCGCCCTCGGGGCAAGAGACCTGCCCGATCGACACATTGAAATTGGGTGCATGTGTGGATCTGTTGGGGGGGCTGGTGCACATTGGGTTAGGGGACCCTACGGCTAATGAGTGCTGCCCTATACTTTCAGGGCTGGCTGAGGTGGAAGCCGCTGTGTGCCTTTGCACTACCCTTAAAATTAAGGCTCTTAGCCTTAATCTCTATGTTCCTATTGCCCTTCAGCTCCTTATTTCATGTGGAAAGACCCCTCCTCCTGGCTACACTTGTTCCCTTTAGAACATAACAGGTTTGGGTATCAAATGGAGTCGACATGAGAGGATGTCGAGTCAAATCTTTGTGTCTCTCTTTTTCGATTTATTTTATTTTTGCTGAATGCAATTGGTGATGTTGTAAGCCATTTATTTTTCAGATTCTGATAATATTGTTGTTATGTGTTGTGCTATGGATTAGGCAACAGAAAGAAAAATCTCAGTTGCCTTTATGTTTTCATTTTTATATGCCTATCTCATTGATTTAGTCATTTTTAATTTGATCAACTCATAACTTTCTTATGAT ATGGAGCCTTCAAAAATTAATTCCCTTCTCTTCATTTGCATGCTTTTCATCTCGACCACCGCTCCCGTTTTCGGGTGCGGTGGTTCTTGCGGCTCTCCCACAAGAAACAAACCCGGTTCCGGTTCAAAAGGCCCGATCGACCTCCCACCCGTCACCCTCCCTCCAGTGACGTTGCCACCGGTGACACTTCCACCGGTGGTCACAAACCCGTCTCCGTCTACGAAACAGCCCTGCCCGCCCTCGGGGCAAGAGACCTGCCCGATCGACACATTGAAATTGGGTGCATGTGTGGATCTGTTGGGGGGGCTGGTGCACATTGGGTTAGGGGACCCTACGGCTAATGAGTGCTGCCCTATACTTTCAGGGCTGGCTGAGGTGGAAGCCGCTGTGTGCCTTTGCACTACCCTTAAAATTAAGGCTCTTAGCCTTAATCTCTATGTTCCTATTGCCCTTCAGCTCCTTATTTCATGTGGAAAGACCCCTCCTCCTGGCTACACTTGTTCCCTTTAG MEPSKINSLLFICMLFISTTAPVFGCGGSCGSPTRNKPGSGSKGPIDLPPVTLPPVTLPPVTLPPVVTNPSPSTKQPCPPSGQETCPIDTLKLGACVDLLGGLVHIGLGDPTANECCPILSGLAEVEAAVCLCTTLKIKALSLNLYVPIALQLLISCGKTPPPGYTCSL Homology
BLAST of Sed0000874 vs. NCBI nr
Match: XP_022933855.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata]) HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65 Identity = 141/208 (67.79%), Postives = 155/208 (74.52%), Query Frame = 0
BLAST of Sed0000874 vs. NCBI nr
Match: KAG7021766.1 (pEARLI1-like lipid transfer protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65 Identity = 139/198 (70.20%), Postives = 153/198 (77.27%), Query Frame = 0
BLAST of Sed0000874 vs. NCBI nr
Match: XP_022966511.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima]) HSP 1 Score: 257.7 bits (657), Expect = 7.1e-65 Identity = 141/208 (67.79%), Postives = 154/208 (74.04%), Query Frame = 0
BLAST of Sed0000874 vs. NCBI nr
Match: XP_023529211.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.7 bits (657), Expect = 7.1e-65 Identity = 140/208 (67.31%), Postives = 154/208 (74.04%), Query Frame = 0
BLAST of Sed0000874 vs. NCBI nr
Match: XP_038880246.1 (36.4 kDa proline-rich protein [Benincasa hispida]) HSP 1 Score: 248.1 bits (632), Expect = 5.6e-62 Identity = 133/216 (61.57%), Postives = 150/216 (69.44%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy Swiss-Prot
Match: Q00451 (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.9e-30 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 7.2e-20 Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.7e-19 Identity = 61/163 (37.42%), Postives = 88/163 (53.99%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18 Identity = 62/169 (36.69%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.2e-18 Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy TrEMBL
Match: A0A6J1F602 (36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111441146 PE=3 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 5.3e-66 Identity = 141/208 (67.79%), Postives = 155/208 (74.52%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy TrEMBL
Match: A0A6J1HPJ2 (36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111466144 PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.4e-65 Identity = 141/208 (67.79%), Postives = 154/208 (74.04%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy TrEMBL
Match: A0A6J1CTE9 (36.4 kDa proline-rich protein OS=Momordica charantia OX=3673 GN=LOC111014420 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 1.0e-61 Identity = 135/212 (63.68%), Postives = 152/212 (71.70%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy TrEMBL
Match: A0A1S3B8S4 (36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=6H01 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60 Identity = 132/215 (61.40%), Postives = 147/215 (68.37%), Query Frame = 0
BLAST of Sed0000874 vs. ExPASy TrEMBL
Match: A0A6J1HBI4 (36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111461860 PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.1e-59 Identity = 134/237 (56.54%), Postives = 151/237 (63.71%), Query Frame = 0
BLAST of Sed0000874 vs. TAIR 10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-41 Identity = 85/131 (64.89%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Sed0000874 vs. TAIR 10
Match: AT2G10940.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-41 Identity = 85/131 (64.89%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Sed0000874 vs. TAIR 10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37 Identity = 78/130 (60.00%), Postives = 96/130 (73.85%), Query Frame = 0
BLAST of Sed0000874 vs. TAIR 10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.6e-36 Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 0
BLAST of Sed0000874 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 141.4 bits (355), Expect = 6.9e-34 Identity = 74/147 (50.34%), Postives = 102/147 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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