Sed0000842 (gene) Chayote v1

Overview


Name	Sed0000842
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CCHC-type domain-containing protein
Location	LG11: 3604118 .. 3610137 (+)
RNA-Seq Expression	Sed0000842
Synteny	Sed0000842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTTTTCAGTTTGCCCAAATGATGAAGAATTTGGAGCTAGTGGATCAGGAAGCTCAAGGAGTATTTGAACTTGAAGACAACGATATTTCAGCGTATGAAAGTGAGCTCGAAAACGTGGTTGCCTGCAAATTACTTACTGAGAAACATTCTAGTCCAGATGTGTTCAAAAAATTAATGCCCAAAATCTGGAACATAGATCAGAAGGTGTTGATTGAATCAGTGGGAGGTAACACATTTGTTTGTACCTTCGTTAATGCTGTTGTTAGAGATAGAGTTCTTGAGGCGAGTCCATGGATTTATGATAACGCGGTGTTGCTGTTTGAAAAGCTGACTGGAGATAAAAGGATTTCGGAGATGGAGTTCGGATTTGCAGCATTTTGGGTTCGTCTTCACGACGTTCCACCAGCCTGCCATACAGAAAATAGTGCAAAAGGCCTAGGTAATTTGATGGGAAAATTTATTATCTGGGATTATGAGGGGGATCAACGAAATAGGGGAAAATTTCTAAGGATCAAGGTGTATATTGACATTCGTTTACCTTTGAGAAGAGCTTTAAAGGTAAAAAGTGGAGCAATGGCAAATGAAAAATGGGTCCGAATTTCATATGAAAAGTTACCTGATTTTTGCAAAGGGTGTGGAAGAATAGGCCATCAGGCAAATGGATGCAGCTATGTTGTCATAGGAGAAGGGTTGTCGTTTCCTTTTGGAGAGGAGTTGAGAGAACCAACCACTTATTTTAGAGGGGAAAGATCTGAGTTTCAGAGGAATGGAGGAAGGGGAAGGGGTCGCGGAAGAGGAAGATGGGGTGAGTATAGGGGAGAGGAGTTCGATTTTCCTGAAAGAAACGCAGGTGGAGAGGGAGTTCGCGACCGAAGAAGAAGGGCGGAGGAGAACAGGGAAGGGCGGATTCAGGCGAAGGTTGAAAGGAGACCCACCGTCAACGGCTCGCCGGCTTCTATCTCGGGAGAAGACGTGGCTTGTCAGGATGAATTTCAGCTTTTGCATAAGAAGGAGTCCATTTTTTGGGCTAGGTCAGGTACGGAGAAAGAAGAGCAGTGCAGAGTTGATTTAAATCAAATTAATGATATGGCAGAAAAGGGACATGTGGTGACATTTAAGAAGGAAAAAGTAATTGAAAAAGGGAAAGGTAAGGTCATCTCAGAAGGTTCAAATGATTTTCTTTTTGGGCTATTTGATATTCATATGAAAGCCCATCAGCATTTGGATAATGGGGGTTTTCGTGGACCAGCCAAAAGAGTGGTTTTTAAAGAATTGGATTTAATGCCTAATTATAATAAGGGAAGTGTGCAGTTAAATCTTTCATGTATTAATGATAAAGCAAAAACTGTTGGTAATAAGGCTGTTAATTTCATGGGCAATGATTTTAGTGGAGATAGAAGAAATTTTGAAGATGGTGATAAATGTAGGGAATTGTTATATCCTACTGAAGCAGTTTTGTTGGATCTACCAATTTCCCATCATAAATTGAAGGAGCAGGAAGGTTCTATAAGGGTCGATCAAAGAATTTTGAAAATGGAGAGAGGTTTGGAACAATCTAATGATTCTGAATTGGATAATAGAGGGATAAATGATGAAAAAGGTAGCAGGAAAACATCCGTTATTAAATGGAAAAGGCGAGCGCGACAGGCAGGTAGTTCGATTGATAAGTCAAGGGAGATCTCTATGGAAAAAAAGGATGAAGTTATTGGAAAAAAACATGAGATGACAAGGGATGAAAGGGAAGAGGAAGGAAAAAAAGGGAAGTTTGATTACATTGATTCGATCAATGGGATATCGGCGAAGACTGTTGAACAGTCTCGCCGGATGCAATGAAAACTTTATGCTGGAACGCTCGGGGGTTGAAAAACCCCCGAGCCATTAGAGCGCTTCGGCATGAAGTGCTTAAAGTGACACCTCAAATTGTTTTTGTGTGCGAATCAAAATGCGGTGAGAATGTGGTGGATAAGTTAAAAATTAGCTTGAATTTTGATTGTTGTTTGTGTGTTCCTGCTATTGGGTTGAGCGGGGGCTTATTGTTATTTTGGAGTTCGAGTTTAGATGTGAAAGTTGTCTCATACTCTCAGGGTCATATTGATATCTTAATCAATGACTTTTTTGGGAGATGGAGATTTACGGGTTTTTATGGAAATCCAGTTCAAAGCAAGCGTAGAGATTCCTGGAATCTTCTAAAAAGACTTGCAGGCTGTTCGAACTTGCCTTGGATGTTGGGTGGTGATTTTAATGAAATTCTTTTGTTTGAGGAGCAGTTAAATGGTTCTGAAAGAAATAAGGTTGGTATGGAGGATTTTAGGGAGGCTATCAATGAGTGTTCACTCATTGATCTGGGCTTTTCTGGAGACAGATTTACTTGGATTAAAAATAAAAAGTCAATTTCTGCTACTAGAGTTCGGCTTGACAGGTATTTTGCTAACCCTCTATTTATATCAAAGTCTGGTAAGATTTCAATCAATAATCTTAATTTTCACTCTTCTGATCATAGAGTTATTTCTGCTGAGTTTAGATGGGTTGGAGAGGGGTCTATGATTTTTAATTATTCTAAAAAGATTATTAGATTTGAAGATAGTTGGGCTAAGTTCAATGGTTGCAAAGAGGTGCTAAGGAAAAATTGGGAGATGGGTGGGACGTTAGGGAATAGTGTTTGTAATCTTATTTTTCGCATTAAAGGTAGCTTATTTGAGATGGCAAATTGGAACAAAGACAGATTAAAAGGATCTATTAGACAAGCTATTCTTAATAAAGAAAATTCTGTTTCTCTGCTAATGGCTAATTCTGGGGGGATAAGATCTGATGAAATTATCAATATTGAAAATGACATTGAAAGGCTCCTTGAGGAGGAGGAAATTTTTTGGAAACAAAGATCTCGTGAAGATTGGTTAAAGTGGGGAGATAAGAATACAAAATGGTTTCATATGCGTGCTTCTCAAAGAAAGAAAAGAAATAGGATTGAAAAATTAGTTGATTGTAATGGGATCTGGCACTATAAGGAGAGGGAGATTGCTCGTATTGCTAGTAATTACTTCTCGAATCTCTTCTCGGCCCATTCTGTGGATACTAAAGCTTATGAGAGGACTTTGGAGGGAGTGGAGAAAAGGCTTTCGAGTGAAGACTGTCAATTTTTAGATAAACCTTTTTCTAGGGAGGATATAGAGATGGCCTTAAAAAATCTTAATCCTTCCAAGGCTCCGGGTCCCGATGGAACTAATGGTTTATTTTTCAAAAATTATTGGGATATAGTGGGTGATGATGTGACTAAAGTGTGTTTGGGTATTCTTAACGAGGGGTTGCCTTTGGATAGGCTAAATAACACCCTGATTACTTTAATTCCTAAAGTTGTTGTCCCGTCGAGAATGGAGGAGTTTCGGCCGATCAGTCTATGCAACACTGTTTATAAGATCATTGCTAAAACGCTTACCAACAGACTCAAGAAGATTATTGATAAAATCATCTCCCCGAATCAAGCGGCTTTTATTCCTGGAAGACTTATAACTGATAATGTTGTCATGGGTTTTGAATGCATTCATTCTATTAATAAAAAGAAAGCTGGTAAAGTTGGTTGGGCGGCGCTTAAACTTGATATGAGCAAAGCTTATGATAGAGTTGATTGGAGCTTTATTCTCGGTATGATGTTAAAATTAGGTTTTAGCCAGACTTGGGTTAATATTATCGGTAGGTGTTTATCTTCGGTTAGATATGTTGTGATGATTAATGGAACTCCTCATGAAGAAATCATTCCTCAAAGAGGCTTGAGACAGGGAGACCCTTTGTCGCCTTACCTCTTTCTTATTTGTGCTGAGGGGCTGTCGACTCTTCTTAGAAAAGAGGAAGAGATGAATTCGTTTAAGAGCTTTAAAATTAACAATCGATGTCCCTCTATTTCCCATCTTTTTTTTGCTGATGACAGTTTGTTGTTTTTCAGGGCCTCTAATGATGATTGTTTAAAGATAAAAGAGATTCTTATCTGTTATGAAAAAGCCTCAGGCCAAACAATTAATTTTGAAAAGTCAGCAATTCATTTCAGTGGTAATGTTGGTGGTAGAGAGAAGAATTTTTTTAGTAGTCTTTTGGGGGTTAAGATTAATGAGAATCTTGGGATTCACCTAGGCATGCCTTCTCAAAACAGTAAAAATAAGAAAGCTTTGTTTCATTCCATCAAAGGGAGACTTGAAAAATGTCTTCAAAGTTGGAAAGGTAAGATGTTGTCTAGAGGAGGTAAAAAGGTGATGATTAAAGCAGTTGGCCAAGCAATTCCGACTTATATTATGAGCTGTTTTCGTCTGACTAAGTCTTTTAAAGAGGATCTTCAAAGAATGTGTGCTAGATTTTGGTGGGGGGAAAATTTTAATAAGGGTAAATCTCATTGGATGAGTTGGGATAAGTTGGGTAGAAGTAAAGAGTCTGGGGGGTTGGGCTTTAGAAATCTTGATATCTTCAATCAAGCGTTGTTAGCTAAGCATAGTTGGAGGATTCTTAGAAATCCTGATAGTTTACTTAGTAGATTGCTAAGGGGGAAGTACTTTAAAGATAATAATTTCTTATCGGCCCCTCTAGGCAATAATCCTTCGCTTGCTTGGAGAAGTATTTGTTGGGGTAGAGATTTATTTATAAAAGGCTATAGATGGAAGGTGGGAAATGGAAGAAATATAACTATTGGTAGAGATCCGTGGATCTCAAGAAAAGGCAATCCCTTTACTGAGGGAGTTAGGTGGGATTGGAAAAATAGGAGTGTGGCGGAGCTGATGGCCAGAGATGGTGGTTGGAACAAGGAGCTCATTTACAACATTTTCTGCAAAGATGATGCTAATATCATTGTTAATACCCCACTCAGCAAGTTTGGTACCAATGATGAAGTTATGTGGAATGATTGTAAAAAGGGTATTTTTTCCGTTAAAAGCGCTTATCATGTTGGTATTAATTTGGCTTCTAAAGAGAAGGAGTCCACATCTGACTCTAAGTTTACTAGCAATTGTTGGAAAAAGTTTTGGAAGATCAATATTTCTTCTAAAATTAAATTGGGAGCTTGGAGTGTTCTTTCTAATGCAATTCCGACTAAGAGCAACATTTACTTAAGAGGAGTGGATATTAATGTTATTTGTCCTATGTGTAGGAAATGTAAAGAGTCGAATATGCATATTATTAAAGATTGCAAAATCGCTATTCGTGCTTGGAATCTCACTTTCCCTTGGTTTACTAATTTTAAAGATTTTTTAAAAAATATAGATAAAGGAATTGATTTTTGGATGGGTTTATGCGATAAAGTTCCAAAGGAGGAGCTCTTTAAAGGAATTGTGGTTATTTGGAGTTTATGGAACTTTCGTAACCAAGGATTAAATGAAGATAATTCCTTTGAGTTCCATAAGCTTCAAGCTATGATGGAAAATGCTATTAATGCTTTTAATTTGCTTAATGCAGGTCCTCTAAAGAAGCCTTTTCGTGTTGATAATGAGAACATCAAATGGGTAGCTCCTCCTCTTGGTGTGTGGAAGATGAATGTGGATGCGTCAATGAGACCAAGTTCAGGTGAAGGTGGCATTGGTTGGGTCATAAGAGATTGGAAAGGTCAGGTGAAGATGGCTGGTTGGAGAGCAAACTTCCAAAACATGTCAATTAAGTGTTTGGAGGCCATAGCTTTGAGGGAGGGTCTTATTCATATCTTAGAGTTGCAGAATCTGCTCCTTCCTCCTATCTTGGTGGAGTCCGATGCTTCAGAGATTATCAAAGCAATTGCTAATGACTCCTTAGACATTTCTGAATTCAGCAATATTATTGTTGATATTAAGCATTTAATGGCTTTGTTGGGTATTGTCAAAGTGGCCCACTGTAATAGGTTATGTAACATGGTTGCTGATGTTTTAGCTAAACAGTCTGATATGGACTATTTTTGTTGGAGGGATCCAATTCTCTCTTTTGAGGATAGACCTCGGTTTTGGAGGGGGAATCTCCCCCCTAATGTTGGCTCCATGGTGGAGAAGGATTGTGTTGGTTTAGTTTGTTGA

mRNA sequence

ATGGATGCTTTTCAGTTTGCCCAAATGATGAAGAATTTGGAGCTAGTGGATCAGGAAGCTCAAGGAGTATTTGAACTTGAAGACAACGATATTTCAGCGTATGAAAGTGAGCTCGAAAACGTGGTTGCCTGCAAATTACTTACTGAGAAACATTCTAGTCCAGATGTGTTCAAAAAATTAATGCCCAAAATCTGGAACATAGATCAGAAGGTGTTGATTGAATCAGTGGGAGGTAACACATTTGTTTGTACCTTCGTTAATGCTGTTGTTAGAGATAGAGTTCTTGAGGCGAGTCCATGGATTTATGATAACGCGGTGTTGCTGTTTGAAAAGCTGACTGGAGATAAAAGGATTTCGGAGATGGAGTTCGGATTTGCAGCATTTTGGGTTCGTCTTCACGACGTTCCACCAGCCTGCCATACAGAAAATAGTGCAAAAGGCCTAGGTAATTTGATGGGAAAATTTATTATCTGGGATTATGAGGGGGATCAACGAAATAGGGGAAAATTTCTAAGGATCAAGGTGTATATTGACATTCGTTTACCTTTGAGAAGAGCTTTAAAGGTAAAAAGTGGAGCAATGGCAAATGAAAAATGGGTCCGAATTTCATATGAAAAGTTACCTGATTTTTGCAAAGGGTGTGGAAGAATAGGCCATCAGGCAAATGGATGCAGCTATGTTGAGTCCATTTTTTGGGCTAGGTCAGGTACGGAGAAAGAAGAGCAGTGCAGAGTTGATTTAAATCAAATTAATGATATGGCAGAAAAGGGACATGTGGTGACATTTAAGAAGGAAAAAGTAATTGAAAAAGGGAAAGGTAAGGTCATCTCAGAAGGTTCAAATGATTTTCTTTTTGGGCTATTTGATATTCATATGAAAGCCCATCAGCATTTGGATAATGGGGGTTTTCGTGGACCAGCCAAAAGAGTGGTTTTTAAAGAATTGGATTTAATGCCTAATTATAATAAGGGAAGTGTGCAGTTAAATCTTTCATGTATTAATGATAAAGCAAAAACTGTTGTCTCGCCGGATGCAATGAAAACTTTATGCTGGAACGCTCGGGGGTTGAAAAACCCCCGAGCCATTAGAGCGCTTCGGCATGAAGTGCTTAAAGTGACACCTCAAATTGTTTTTGTGTGCGAATCAAAATGCGGTGAGAATGTGGTGGATAAGTTAAAAATTAGCTTGAATTTTGATTGTTGTTTGTGTGTTCCTGCTATTGGGTTGAGCGGGGGCTTATTGTTATTTTGGAGTTCGAGTTTAGATGTGAAAGTTGTCTCATACTCTCAGGGTCATATTGATATCTTAATCAATGACTTTTTTGGGAGATGGAGATTTACGGGTTTTTATGGAAATCCAGTTCAAAGCAAGCGTAGAGATTCCTGGAATCTTCTAAAAAGACTTGCAGGCTGTTCGAACTTGCCTTGGATGTTGGGTGGTGATTTTAATGAAATTCTTTTGTTTGAGGAGCAGTTAAATGGTTCTGAAAGAAATAAGGTTGGTATGGAGGATTTTAGGGAGGCTATCAATGAGTGTTCACTCATTGATCTGGGCTTTTCTGGAGACAGATTTACTTGGATTAAAAATAAAAAGTCAATTTCTGCTACTAGAGTTCGGCTTGACAGGTATTTTGCTAACCCTCTATTTATATCAAAGTCTGAGGGGTCTATGATTTTTAATTATTCTAAAAAGATTATTAGATTTGAAGATAGTTGGGCTAAGTTCAATGGTTGCAAAGAGGTGCTAAGGAAAAATTGGGAGATGGGTGGGACGTTAGGGAATAGTGTTTGTAATCTTATTTTTCGCATTAAAGGTAGCTTATTTGAGATGGCAAATTGGAACAAAGACAGATTAAAAGGATCTATTAGACAAGCTATTCTTAATAAAGAAAATTCTGTTTCTCTGCTAATGGCTAATTCTGGGGGGATAAGATCTGATGAAATTATCAATATTGAAAATGACATTGAAAGGCTCCTTGAGGAGGAGGAAATTTTTTGGAAACAAAGATCTCTTAGGTGGGATTGGAAAAATAGGAGTGTGGCGGAGCTGATGGCCAGAGATGGTGGTTGGAACAAGGAGCTCATTTACAACATTTTCTGCAAAGATGATGCTAATATCATTGTTAATACCCCACTCAGCAAGTTTGGTACCAATGATGAAGTTATGTGGAATGATTGTAAAAAGGGTATTTTTTCCGTTAAAAGCGCTTATCATGTTGGTATTAATTTGGCTTCTAAAGAGAAGGAGTCCACATCTGACTCTAAGTTTACTAGCAATTGTTGGAAAAAGTTTTGGAAGATCAATATTTCTTCTAAAATTAAATTGGGAGCTTGGAGTGTTCTTTCTAATGCAATTCCGACTAAGAGCAACATTTACTTAAGAGGAGTGGATATTAATGTTATTTGTCCTATGTGTAGGAAATGTAAAGAGTCGAATATGCATATTATTAAAGATTGCAAAATCGCTATTCGTGCTTGGAATCTCACTTTCCCTTGGTTTACTAATTTTAAAGATTTTTTAAAAAATATAGATAAAGGAATTGATTTTTGGATGGGTTTATGCGATAAAGTTCCAAAGGAGGAGCTCTTTAAAGGAATTGTGGTTATTTGGAGTTTATGGAACTTTCGTAACCAAGGATTAAATGAAGATAATTCCTTTGAGTTCCATAAGCTTCAAGCTATGATGGAAAATGCTATTAATGCTTTTAATTTGCTTAATGCAGGTCCTCTAAAGAAGCCTTTTCGTGTTGATAATGAGAACATCAAATGGGTAGCTCCTCCTCTTGGTGTGTGGAAGATGAATGTGGATGCGTCAATGAGACCAAGTTCAGGTGAAGGTGGCATTGGTTGGGTCATAAGAGATTGGAAAGGTCAGGTGAAGATGGCTGGTTGGAGAGCAAACTTCCAAAACATGTCAATTAAGTGTTTGGAGGCCATAGCTTTGAGGGAGGGTCTTATTCATATCTTAGAGTTGCAGAATCTGCTCCTTCCTCCTATCTTGGTGGAGTCCGATGCTTCAGAGATTATCAAAGCAATTGCTAATGACTCCTTAGACATTTCTGAATTCAGCAATATTATTGTTGATATTAAGCATTTAATGGCTTTGTTGGGTATTGTCAAAGTGGCCCACTGTAATAGGTTATGTAACATGGTTGCTGATGTTTTAGCTAAACAGTCTGATATGGACTATTTTTGTTGGAGGGATCCAATTCTCTCTTTTGAGGATAGACCTCGGTTTTGGAGGGGGAATCTCCCCCCTAATGTTGGCTCCATGGTGGAGAAGGATTGTGTTGGTTTAGTTTGTTGA

Coding sequence (CDS)

ATGGATGCTTTTCAGTTTGCCCAAATGATGAAGAATTTGGAGCTAGTGGATCAGGAAGCTCAAGGAGTATTTGAACTTGAAGACAACGATATTTCAGCGTATGAAAGTGAGCTCGAAAACGTGGTTGCCTGCAAATTACTTACTGAGAAACATTCTAGTCCAGATGTGTTCAAAAAATTAATGCCCAAAATCTGGAACATAGATCAGAAGGTGTTGATTGAATCAGTGGGAGGTAACACATTTGTTTGTACCTTCGTTAATGCTGTTGTTAGAGATAGAGTTCTTGAGGCGAGTCCATGGATTTATGATAACGCGGTGTTGCTGTTTGAAAAGCTGACTGGAGATAAAAGGATTTCGGAGATGGAGTTCGGATTTGCAGCATTTTGGGTTCGTCTTCACGACGTTCCACCAGCCTGCCATACAGAAAATAGTGCAAAAGGCCTAGGTAATTTGATGGGAAAATTTATTATCTGGGATTATGAGGGGGATCAACGAAATAGGGGAAAATTTCTAAGGATCAAGGTGTATATTGACATTCGTTTACCTTTGAGAAGAGCTTTAAAGGTAAAAAGTGGAGCAATGGCAAATGAAAAATGGGTCCGAATTTCATATGAAAAGTTACCTGATTTTTGCAAAGGGTGTGGAAGAATAGGCCATCAGGCAAATGGATGCAGCTATGTTGAGTCCATTTTTTGGGCTAGGTCAGGTACGGAGAAAGAAGAGCAGTGCAGAGTTGATTTAAATCAAATTAATGATATGGCAGAAAAGGGACATGTGGTGACATTTAAGAAGGAAAAAGTAATTGAAAAAGGGAAAGGTAAGGTCATCTCAGAAGGTTCAAATGATTTTCTTTTTGGGCTATTTGATATTCATATGAAAGCCCATCAGCATTTGGATAATGGGGGTTTTCGTGGACCAGCCAAAAGAGTGGTTTTTAAAGAATTGGATTTAATGCCTAATTATAATAAGGGAAGTGTGCAGTTAAATCTTTCATGTATTAATGATAAAGCAAAAACTGTTGTCTCGCCGGATGCAATGAAAACTTTATGCTGGAACGCTCGGGGGTTGAAAAACCCCCGAGCCATTAGAGCGCTTCGGCATGAAGTGCTTAAAGTGACACCTCAAATTGTTTTTGTGTGCGAATCAAAATGCGGTGAGAATGTGGTGGATAAGTTAAAAATTAGCTTGAATTTTGATTGTTGTTTGTGTGTTCCTGCTATTGGGTTGAGCGGGGGCTTATTGTTATTTTGGAGTTCGAGTTTAGATGTGAAAGTTGTCTCATACTCTCAGGGTCATATTGATATCTTAATCAATGACTTTTTTGGGAGATGGAGATTTACGGGTTTTTATGGAAATCCAGTTCAAAGCAAGCGTAGAGATTCCTGGAATCTTCTAAAAAGACTTGCAGGCTGTTCGAACTTGCCTTGGATGTTGGGTGGTGATTTTAATGAAATTCTTTTGTTTGAGGAGCAGTTAAATGGTTCTGAAAGAAATAAGGTTGGTATGGAGGATTTTAGGGAGGCTATCAATGAGTGTTCACTCATTGATCTGGGCTTTTCTGGAGACAGATTTACTTGGATTAAAAATAAAAAGTCAATTTCTGCTACTAGAGTTCGGCTTGACAGGTATTTTGCTAACCCTCTATTTATATCAAAGTCTGAGGGGTCTATGATTTTTAATTATTCTAAAAAGATTATTAGATTTGAAGATAGTTGGGCTAAGTTCAATGGTTGCAAAGAGGTGCTAAGGAAAAATTGGGAGATGGGTGGGACGTTAGGGAATAGTGTTTGTAATCTTATTTTTCGCATTAAAGGTAGCTTATTTGAGATGGCAAATTGGAACAAAGACAGATTAAAAGGATCTATTAGACAAGCTATTCTTAATAAAGAAAATTCTGTTTCTCTGCTAATGGCTAATTCTGGGGGGATAAGATCTGATGAAATTATCAATATTGAAAATGACATTGAAAGGCTCCTTGAGGAGGAGGAAATTTTTTGGAAACAAAGATCTCTTAGGTGGGATTGGAAAAATAGGAGTGTGGCGGAGCTGATGGCCAGAGATGGTGGTTGGAACAAGGAGCTCATTTACAACATTTTCTGCAAAGATGATGCTAATATCATTGTTAATACCCCACTCAGCAAGTTTGGTACCAATGATGAAGTTATGTGGAATGATTGTAAAAAGGGTATTTTTTCCGTTAAAAGCGCTTATCATGTTGGTATTAATTTGGCTTCTAAAGAGAAGGAGTCCACATCTGACTCTAAGTTTACTAGCAATTGTTGGAAAAAGTTTTGGAAGATCAATATTTCTTCTAAAATTAAATTGGGAGCTTGGAGTGTTCTTTCTAATGCAATTCCGACTAAGAGCAACATTTACTTAAGAGGAGTGGATATTAATGTTATTTGTCCTATGTGTAGGAAATGTAAAGAGTCGAATATGCATATTATTAAAGATTGCAAAATCGCTATTCGTGCTTGGAATCTCACTTTCCCTTGGTTTACTAATTTTAAAGATTTTTTAAAAAATATAGATAAAGGAATTGATTTTTGGATGGGTTTATGCGATAAAGTTCCAAAGGAGGAGCTCTTTAAAGGAATTGTGGTTATTTGGAGTTTATGGAACTTTCGTAACCAAGGATTAAATGAAGATAATTCCTTTGAGTTCCATAAGCTTCAAGCTATGATGGAAAATGCTATTAATGCTTTTAATTTGCTTAATGCAGGTCCTCTAAAGAAGCCTTTTCGTGTTGATAATGAGAACATCAAATGGGTAGCTCCTCCTCTTGGTGTGTGGAAGATGAATGTGGATGCGTCAATGAGACCAAGTTCAGGTGAAGGTGGCATTGGTTGGGTCATAAGAGATTGGAAAGGTCAGGTGAAGATGGCTGGTTGGAGAGCAAACTTCCAAAACATGTCAATTAAGTGTTTGGAGGCCATAGCTTTGAGGGAGGGTCTTATTCATATCTTAGAGTTGCAGAATCTGCTCCTTCCTCCTATCTTGGTGGAGTCCGATGCTTCAGAGATTATCAAAGCAATTGCTAATGACTCCTTAGACATTTCTGAATTCAGCAATATTATTGTTGATATTAAGCATTTAATGGCTTTGTTGGGTATTGTCAAAGTGGCCCACTGTAATAGGTTATGTAACATGGTTGCTGATGTTTTAGCTAAACAGTCTGATATGGACTATTTTTGTTGGAGGGATCCAATTCTCTCTTTTGAGGATAGACCTCGGTTTTGGAGGGGGAATCTCCCCCCTAATGTTGGCTCCATGGTGGAGAAGGATTGTGTTGGTTTAGTTTGTTGA

Protein sequence

MDAFQFAQMMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKLMPKIWNIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFGFAAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIRLPLRRALKVKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGCSYVESIFWARSGTEKEEQCRVDLNQINDMAEKGHVVTFKKEKVIEKGKGKVISEGSNDFLFGLFDIHMKAHQHLDNGGFRGPAKRVVFKELDLMPNYNKGSVQLNLSCINDKAKTVVSPDAMKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVPAIGLSGGLLLFWSSSLDVKVVSYSQGHIDILINDFFGRWRFTGFYGNPVQSKRRDSWNLLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGDRFTWIKNKKSISATRVRLDRYFANPLFISKSEGSMIFNYSKKIIRFEDSWAKFNGCKEVLRKNWEMGGTLGNSVCNLIFRIKGSLFEMANWNKDRLKGSIRQAILNKENSVSLLMANSGGIRSDEIINIENDIERLLEEEEIFWKQRSLRWDWKNRSVAELMARDGGWNKELIYNIFCKDDANIIVNTPLSKFGTNDEVMWNDCKKGIFSVKSAYHVGINLASKEKESTSDSKFTSNCWKKFWKINISSKIKLGAWSVLSNAIPTKSNIYLRGVDINVICPMCRKCKESNMHIIKDCKIAIRAWNLTFPWFTNFKDFLKNIDKGIDFWMGLCDKVPKEELFKGIVVIWSLWNFRNQGLNEDNSFEFHKLQAMMENAINAFNLLNAGPLKKPFRVDNENIKWVAPPLGVWKMNVDASMRPSSGEGGIGWVIRDWKGQVKMAGWRANFQNMSIKCLEAIALREGLIHILELQNLLLPPILVESDASEIIKAIANDSLDISEFSNIIVDIKHLMALLGIVKVAHCNRLCNMVADVLAKQSDMDYFCWRDPILSFEDRPRFWRGNLPPNVGSMVEKDCVGLVC

Homology

[Close]

BLAST of Sed0000842 vs. NCBI nr
Match: KAF7824053.1 (hypothetical protein G2W53_022197 [Senna tora])

HSP 1 Score: 330.5 bits (846), Expect = 5.6e-86
Identity = 313/1215 (25.76%), Postives = 498/1215 (40.99%), Query Frame = 0


Query: 17   DQEAQGVFELEDNDISA-YESELENVVAC---KLLTEKHSSPDVFKKLMPKIWNIDQKVL 76
            +++  GV E    DI+A    E + V  C    L TE   + + F+  + ++WN+   V 
Sbjct: 10   NEDESGVIE----DIAADPHHETQRVQLCLVGSLWTEGSYNVNAFQSTIKQVWNVRHGVD 69

Query: 77   IESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFGFAAFWVRL 136
            I  +G N ++  F +   R R+L+  PW +D  VL  +++TGD+  S ++     FWVR+
Sbjct: 70   IRVLGKNLYIFQFYHWKDRSRILKGEPWWFDKRVLALQEMTGDEPPSSIKPSSVPFWVRI 129

Query: 137  HDVPPACHTENSAKGLGNLMGKFIIWDYEG-----DQRNRGKFLRIKVYIDIRLPLRRAL 196
            HDVP    T ++AK +G  +G F+ WD          R  G +LR      +++   ++ 
Sbjct: 130  HDVPYNLRTLDAAKSIGQKVGIFLEWDNSDYGRWETHRAFGPWLRAS---PVKIGDIQSK 189

Query: 197  KVKSGAMANEKWVRISYEK-------------------LPDFCKGC----GRIGHQANGC 256
                G  A +   + + E                      D   G     G +     G 
Sbjct: 190  STHEGGSAKKMLFKPAMESRDQEGVQPINDVDHVFSGVFADVDDGAVPKPGDVLTTEAGL 249

Query: 257  SYVESI----------------FWARSGTEKEEQCRVDLNQIN----------DMAEKGH 316
            S V+++                F      E E        QI           +MA+  +
Sbjct: 250  SVVQTLDDCLLTHSKPVAHVSPFHDSITVEGESSVNAKNKQIPNSGVIGSSGVNMAKSPN 309

Query: 317  V----VTFKKEKVIEK---------------GKGKVISEGSN--------------DFLF 376
            V    V  K E    K                +GK I+E                 DF+ 
Sbjct: 310  VIEAFVNLKNEAHESKDGKGRRAKLLTQTKCNRGKQIAEQQRNMKTAIPSTIRQNMDFVD 369

Query: 377  GLFDIHMKAHQHLDNGGFRGPAKRVVFKELDLMPNYNKGSVQLNLSCINDKAKTVVSPDA 436
             LFD+H+ A   LD G  R   K+  + E+              L   +  A     P  
Sbjct: 370  QLFDVHIMA---LD-GVSRKDGKKRSWVEM--------------LEDDSSAACEAAPPGF 429

Query: 437  MKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVP 496
            M  +CWN RGL  PRA+R L+       P ++F+ E+K   + + +LK  L FDC   V 
Sbjct: 430  MSHICWNCRGLGTPRAVRDLKRLNQDKRPSLIFLMETKAKASAMKRLKFQLGFDCVFAVD 489

Query: 497  AIG----LSGGLLLFWSSSLDVKVVSYSQGHIDILIND--FFGRWRFTGFYGNPVQSKRR 556
              G     +GGL LFW ++LD+ + S+S  HID++++D     +WR TG +G P +  + 
Sbjct: 490  CSGEGKQRAGGLALFWYNTLDLTLASFSSNHIDVIVSDAGLNIKWRLTGVHGFPEEQSKH 549

Query: 557  DSWNLLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGF 616
             +W+LL+ LA  S+LPW+  GDFNEI+   E+  G+ ++   M+ FR+A N C   D+GF
Sbjct: 550  QTWDLLRLLASNSDLPWLCYGDFNEIMFASEKQGGTAKSDRSMQAFRDACNHCGFTDMGF 609

Query: 617  SGDRFTWIKNKKSISATRVRLDRYFANPLFISK---SEGSMIFNYS-------------- 676
             G  FTW   ++     + RLDR FA   ++ K   +E + I ++S              
Sbjct: 610  KGYPFTWNNGRRDQHNIQERLDRVFATEEWLLKFPYTEVNHISHFSSDHCALEISFDSLP 669

Query: 677  -------KKIIRFEDSWAKFNGCKEVLRKNWEMGGTLGNSVCNLIFRIKGSLFEMANWNK 736
                   +++ RFE++W     CK+V+   W+        + ++   +            
Sbjct: 670  PSNHTRRQRLFRFEEAWCSDERCKDVINAVWQGTDAFSEKLTSVASNL------------ 729

Query: 737  DRLKGSIRQAIL--NKENSVSLLMANSGGIRSDEIINIENDIERLLEEEEIFWKQRSLR- 796
                 S  +A L  N   +   +M     ++      + N  +  + E+        LR 
Sbjct: 730  -----SFMEATLAPNASFTWRCIMKARWVLQLGAGWRVGNGFQINIWEDNWISPITGLRI 789

Query: 797  -----WDWKNRSVAELMARDG-GWNKELIYNIFCKDDANIIVNTPLSKFGTNDEVMWNDC 856
                  D     VA+L+  +   W ++LI + F   +A II++ PLS     D+ +W   
Sbjct: 790  LSPRPLDSDLVMVADLINHENRTWKRDLINSAF-PSEARIILSLPLSWRNIQDKFIWPFE 849

Query: 857  KKGIFSVKSAYHVGINLASKEKESTSDSKFTSNCWKKFWKINISSKIKLGAWSVLSNAIP 916
            K   +SVKSAYH+     +    STS +K     W + WK+ ++ KI++  W +  NA+P
Sbjct: 850  KHLSYSVKSAYHIISKNMASLSPSTSSTKVN---WARIWKLTVTPKIRIFFWRLCHNALP 909

Query: 917  TKSNIYLRGVDINVICPMCRKCKESNMHIIKDCKIAIRAWNLTFPWFTNFKDFLKNIDKG 976
            T  N+  RGV I   CP CR   E  +H    C  A   W L+      F   L + +  
Sbjct: 910  TCLNLGKRGVQILNECPRCRLPNEDTVHTFIGCTWAQLVWFLS---PLGFFPILHSNEAF 969

Query: 977  IDFWMGLCDKVPKEELFKGIVVIWSLWNFRNQGLNEDNSFEFHKLQAMMENAINAFNLLN 1036
            ID+     +    E L     V W++WN RN  L         +    + + +  ++L +
Sbjct: 970  IDWLHSKLEDESIEVLNWIATVCWAIWNDRNNFLFNAKHVSVEECVHNVLSLMAEYSLHD 1029

Query: 1037 AGPLKKPFRVDNENIKWVAPPLGVWKMNVDASMRPSSGEGGIGWVIRDWKGQVKMAGWRA 1096
               L     V +   KW  P     K+NVDA+ R S  E  +G V+RD  G +       
Sbjct: 1030 KQSLSNDPCVSSLISKWKKPKSYFHKLNVDAA-RLSDTEWSLGAVVRDDCGDLHFVA--- 1089

[Close]

BLAST of Sed0000842 vs. NCBI nr
Match: XP_018826186.1 (uncharacterized protein LOC108995141 [Juglans regia] >KAF5471486.1 hypothetical protein F2P56_008274 [Juglans regia])

HSP 1 Score: 293.1 bits (749), Expect = 9.9e-75
Identity = 186/581 (32.01%), Postives = 287/581 (49.40%), Query Frame = 0


Query: 1   MDAFQFAQMMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKL 60
           MD+ +  +  K L L++ E   + EL+++  +    + +  V  K+ + +  S +V    
Sbjct: 1   MDSLE--EKWKGLRLLEDENASI-ELDEDTTTELIYKEQRTVLGKIFSSRIISKEVLGST 60

Query: 61  MPKIWNIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISE 120
           M K+W I +      V  NTF   F N   + RV E  PW++DN VL+ ++  G K +  
Sbjct: 61  MAKVWKISKAAKFTEVCPNTFAIIFENVADKMRVWEGRPWLFDNQVLVMKEFEGYKPLHS 120

Query: 121 MEFGFAAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIR 180
           + F    FW+R+H++P +C T+   + +G  +GK    D + D    G FLR++V +D+ 
Sbjct: 121 VSFDSECFWIRIHNLPISCMTKVKGEQIGGTVGKVERVDVQEDGSGWGNFLRVQVLLDLT 180

Query: 181 LPLRRALKVKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGCSYVE------SIFWAR 240
            P+ R   +      N  W   SYEKLP  C  CG + H  NGCS  +         W R
Sbjct: 181 KPVARGRTLT--VRGNRFWAPFSYEKLPKICFSCGCMVHGVNGCSGGQGNNEEMEDKWKR 240

Query: 241 SGTEKEE-----QCRVDLNQINDMAEKGHVVTFKKEKVIEKGK-GKVISEGSNDFLFGLF 300
              +KE        +   N +    ++G   T KKEK  E+ + GK + E + D      
Sbjct: 241 ESEKKENLETRAGAKEGKNGLGSDEDEGQ--TRKKEKGREESEGGKDLEEENGDREDE-- 300

Query: 301 DIHMKAHQHLDNGGFRGPAKRVVFKELD-------LMPNYNKGSVQLN---------LSC 360
            +  +  +  D       ++ +V K L+        + +  KG + +             
Sbjct: 301 GMMRRGEERWDKQATEEESENMVDKALEETYGQMVEVSSEGKGGIGVEDHPKKKGEWKRR 360

Query: 361 INDKAKTVVS-----PDAMKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKCGEN 420
              K K VVS     P+ MK L WN RGL NPR ++ L + V K  P +VFV E+K  + 
Sbjct: 361 ARAKGKQVVSDYPIPPNIMKILSWNCRGLGNPRTVQDLYNMVEKNKPSLVFVMETKSLKK 420

Query: 421 VVDKLKISLNFDCCLCVPAIGLSGGLLLFWSSSLDVKVVSYSQGHIDILI-NDFFGRWRF 480
             D L+  L  + C  V A+G  GGL+L W+S +  ++V+YSQ HI++ I  +   +W  
Sbjct: 421 SFDSLRRRLQCEGCFVVEAVGKGGGLVLLWNSDVRAEIVNYSQSHINVWIEEEGEKKWLL 480

Query: 481 TGFYGNPVQSKRRDSWNLLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVGMEDFR 540
           T FYG P  +KR++SW+LL  L   +N+ W + GDFNEIL  +E+  G  R +  ME FR
Sbjct: 481 TCFYGQPDTNKRKESWSLLNSLKPAANIGWCIVGDFNEILTNDEKWGGRARPEGQMELFR 540

Query: 541 EAINECSLIDLGFSGDRFTWIKNKKSISATRVRLDRYFANP 548
           E +NE +L DLG+ GD+FTW  +    + T+ RLDR  A P
Sbjct: 541 EVMNEGNLYDLGWKGDKFTWSNSHGDDTFTKERLDRAVATP 572

[Close]

BLAST of Sed0000842 vs. NCBI nr
Match: KAF8408042.1 (hypothetical protein HHK36_007182 [Tetracentron sinense])

HSP 1 Score: 283.5 bits (724), Expect = 7.8e-72
Identity = 199/720 (27.64%), Postives = 326/720 (45.28%), Query Frame = 0


Query: 346  MKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVP 405
            MK L WN +GL NP  IR L + V K  P  VF+ E++  +  ++K+K+SL F   + V 
Sbjct: 1    MKCLSWNCQGLGNPWTIRNLHNIVKKEDPWFVFLMETRLKKQDMEKIKVSLGFSNAIVVE 60

Query: 406  AIGLSGGLLLFWSSSLDVKVVSYSQGHIDILINDFFGR--WRFTGFYGNPVQSKRRDSWN 465
            ++G SGGL L W   LD+ + SYS+ HID+++     R  WR TG YG+P  +K+ ++W 
Sbjct: 61   SVGRSGGLCLLWRQDLDISLQSYSKNHIDVVLGTVGEREVWRLTGMYGHPEAAKKWETWE 120

Query: 466  LLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGDR 525
            L++ L+   ++PW+  GDFNEI   EE+    E+    M  F+EAI +C LI LGF G+ 
Sbjct: 121  LIRYLSRSYSMPWVCFGDFNEITCAEEKSGRVEKAAWKMRKFKEAILDCHLIGLGFEGNT 180

Query: 526  FTWIKNKKSISATRVRLDRYFA-----------------------NPLFISKSEGSMIFN 585
            FTW   +      R RLDR  A                       +PL ++  + +    
Sbjct: 181  FTWCNKRSGEGNVRERLDRAMATSDWCFLFPFTTVKHLSCHTSDHSPLLLAFDKEAPKIA 240

Query: 586  YSKKIIRFEDSWAKFNGCKEVLRKNWEMGGTLGNSVCNLIFRIKGSLFEMANWNKDRLKG 645
              K+  RFE  W     C E++   W        + C+                      
Sbjct: 241  RKKRSFRFEAMWIHSPECAEIIDSAW--------TGCH---------------------- 300

Query: 646  SIRQAILNKENSVSLLMANSGGIRSDEIINIENDIERLLEEEEIFWKQRSLRWDWKNRSV 705
             +   +L ++  VSLL              I+ D             Q++          
Sbjct: 301  QVSAQVLPRDAKVSLL--------------IDKD-------------QKT---------- 360

Query: 706  AELMARDGGWNKELIYNIFCKDDANIIVNTPLSKFGTNDEVMWNDCKKGIFSVKSAYHVG 765
                     WN  L+  +F   +A +I + PLS+    D+ +W+   KG FSV+SAYH+ 
Sbjct: 361  ---------WNHTLLMTVFMPHEAELISSIPLSERLPPDKRVWHFTSKG-FSVRSAYHLT 420

Query: 766  INLASKEKESTS-------DSKFTSNCWKKFWKINISSKIKLGAWSVLSNAIPTKSNIYL 825
              L  +E  ++S       +   +   W + W++ I  K+K+  W V  N +P ++N+  
Sbjct: 421  STLRDRESATSSSTSSLSWNGSLSGIKWSQVWQLAIPPKVKIFIWKVALNILPVRANLCK 480

Query: 826  RGVDINVICPMCRKCKESNMHIIKDCKIAIRAWNLTFPWFTNFKDFLKNIDKGIDFWMGL 885
            R + +  +C +C +  E+ +H++K+C  A + W L+       +    + D  +  W+  
Sbjct: 481  RKIPVENVCGVCGEEGETILHVLKNCHYARQVWLLS---QLGLRSDATSAD-SLSSWVEE 540

Query: 886  CDKVPKEE-LFKGIVVIWSLWNFRNQGLNEDNSFEFHKLQAMMENAINAFNLLNAGPLKK 945
              K   EE L    ++ WS+W  RN+       + F  ++    N +   N L A     
Sbjct: 541  IMKSHGEEGLSAFFMIAWSIWKHRNE-------YIFSGVKMTPFNCVQRANKLLADFHNA 600

Query: 946  PFRVDNENI----KWVAPPLGVWKMNVDASMRPSSGEGGIGWVIRDWKGQVKMAGWRANF 1005
              R   E+I     W+APP  ++K+N+D ++       G+G V+RD  G +  A  +   
Sbjct: 601  NDRAAPESISAARSWLAPPGDLFKVNIDGALHLEDRSAGVGVVVRDHNGDLIAAMSKRIS 628

Query: 1006 QNMSIKCLEAIALREGLIHILELQNLLLPPILVESDASEIIKAIANDSLDISEFSNIIVD 1029
               S   +EAIA REGL   LEL    +  +++ESD+   I+A+ +   + S F N+++D
Sbjct: 661  NTQSAAVIEAIAAREGLKFALELG---IQEVILESDSVNTIRALTSQE-ENSSFENLVLD 628

[Close]

BLAST of Sed0000842 vs. NCBI nr
Match: KAG2663507.1 (hypothetical protein I3760_16G033000 [Carya illinoinensis])

HSP 1 Score: 281.6 bits (719), Expect = 3.0e-71
Identity = 207/794 (26.07%), Postives = 347/794 (43.70%), Query Frame = 0


Query: 9   MMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKLMPKIWNID 68
           M  NL L ++E   +  +++N  S  + + E  +  K+ +++    +V +    KIW + 
Sbjct: 7   MWGNLHLNEEEEDAIV-IDENVCSEVQRKGERSLIGKIWSDRQVGKNVVESTFAKIWRLS 66

Query: 69  QKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFGFAAF 128
           + V++  V  NTF+  F     +DRV    PW +D  + +     G   +SEM+F  A+F
Sbjct: 67  KSVVLREVAPNTFILIFATHADKDRVESGRPWFFDGHLFVINPFDGSIPVSEMKFDHASF 126

Query: 129 WVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIRLPLRRALK 188
           WV+ H++P     +     LG+ +G+    + + D    G+ LR+K+ +D+R PL R   
Sbjct: 127 WVQFHNLPLLGMNKECGAKLGSTIGEVEEVEVDEDDVAWGRSLRVKIMLDLRKPLARGRT 186

Query: 189 VKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGCSYVESI-----FWARS-------- 248
           +    +  + W  + YEK+P FC  CGRI H + GC   + +      W R+        
Sbjct: 187 IVLHGV--KVWSPVKYEKIPRFCFTCGRILHGSVGCQVQKDVSIQFGSWLRAESPLKKRW 246

Query: 249 ------GTEK--EEQCRVDLNQIND---------MAEKGHVVTFK--------------- 308
                  T+K    +  ++ N + D         M   G+V++                 
Sbjct: 247 EIKKELSTDKGSSSEAGMEQNTVADGGAADHGGPMKCSGNVLSSSMLSDDGINGDGLGVD 306

Query: 309 ----KEKVI-----EKGKGKVISEGS---NDFLFGLFDIHMKAHQHLDNG---GFRGPA- 368
                +K +     E+G  +V++E     +D   G  +IH         G   G  GP  
Sbjct: 307 IDSINDKAVTDCYKEQGLNQVVTETCDLLSDGNLGGKEIHASETSFGPAGGPSGLGGPTD 366

Query: 369 KRVVFKELDLMPN-------------------------------------YNKGSVQ--- 428
            +    E  L+P                                        K +V+   
Sbjct: 367 SQAGLNETGLVPEGPEVQPAVHQLPLTQQGRHTRSSWKKKARGSFLPAEPLEKSTVRKRS 426

Query: 429 ---LNLSCINDKAKTVVSPDAMKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKC 488
              L+L      A     P  M  + WN+RGL NP  ++AL   V    P I+F+ E+K 
Sbjct: 427 GDFLSLDQSLIPASKKALPGTMSLISWNSRGLGNPVGVQALSDLVRSKAPDILFLQETKL 486

Query: 489 GENVVDKLKISLNFDCCLCVPAIGLSGGLLLFWSSSLDVKVVSYSQGHIDILI---NDFF 548
              V++++K  L F  CL V   G SGG+ LFW++   V++ ++S+ HI   +    +  
Sbjct: 487 NARVMERMKYQLGFKNCLAVSCEGKSGGIALFWNNRFKVEIQTFSKFHIHAKVTEEEENV 546

Query: 549 GRWRFTGFYGNPVQSKRRDSWNLLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVG 608
             W  TGFYGN   SKR +SWNLL+ L   S+  W++ GDFNEIL   E+  G ++++  
Sbjct: 547 EPWWLTGFYGNSDVSKRHESWNLLRTLLVPSDKGWLILGDFNEILSNAEKSGGRDKSERQ 606

Query: 609 MEDFREAINECSLIDLGFSGDRFTWIKNKKSISATRVRLDRYFAN--------------- 668
           M+ FR+ I+EC L DLGF+G+ FTW   ++       RLDR+ +N               
Sbjct: 607 MKAFRDVIDECHLHDLGFNGNPFTWCNRRERAHCISERLDRFLSNLKWHSFYPMASVIHG 666

Query: 669 --------PLFISKSEGSMIFNYSKKIIRFEDSWAKFNGCKEVLRKNWEMGGTLGNSVCN 671
                   P+ +  + GS +    KK+ RFE  W     CK+V++  W   G  G    +
Sbjct: 667 VIAYSDHVPIMLKLTAGS-VQGPRKKLFRFEAMWVDATDCKQVIQDAWR--GVEGRKDLS 726

[Close]

BLAST of Sed0000842 vs. NCBI nr
Match: PNY16372.1 (ribonuclease H, partial [Trifolium pratense])

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-68
Identity = 193/699 (27.61%), Postives = 317/699 (45.35%), Query Frame = 0


Query: 10  MKNLELVDQEAQGV-FELEDNDISAYESELENVVACKLLTEKHSSPDVFKKLMPKIWNID 69
           +  L L ++E  G  FE E+ + +  + +L   +  + L +K    +  K  M  +W   
Sbjct: 6   LDGLSLHEEEEDGFSFEFEEEEDA--QVDLRWCLIGRFLCDKAIHVNSMKVRMADLWKPV 65

Query: 70  QKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFGFAAF 129
             V I+      F+  F + +  + VL  SPWI+D  +L+ E++    +I ++     + 
Sbjct: 66  MGVTIKETKRGIFLFHFNHQIDMEEVLNGSPWIFDYNMLVLERVQLGMQIEQIPLNHVSL 125

Query: 130 WVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIRLPLRRALK 189
           WV++H++P     E     L N +G+F+ +D   +     +F+RI+V ID+RLPL++  K
Sbjct: 126 WVQVHNLPTGLMKERVGTTLANYIGEFMEYDKNNNTSFWREFMRIRVKIDVRLPLKKDAK 185

Query: 190 VKSGAMANEKW--VRISYEKLPDFCKGCGRIGHQANGCSYVESIFWARSGTEKEEQCRVD 249
           VK+      KW  V I YEKL  FC  CG +GH                    E +C+V 
Sbjct: 186 VKN---REGKWCTVNIKYEKLGVFCFVCGIMGH-------------------AENKCQVR 245

Query: 250 LNQINDMAEKGHVVTFKKEKVIEKGKGKVISE------GSNDFLFGLFDIHMKAHQHLDN 309
               ND   +G     + E    +  G+V S       GS +   G         Q   +
Sbjct: 246 FAMENDDGRRGWSADLRAEP--RRRGGRVTSRWLKEEGGSGETAMGGHTAVPPNFQPEQS 305

Query: 310 GGFRGPAKRVVFKELDLMPNYNKGSVQLNLSCINDKAKTVVSPDAMKTLCWNARGLKNPR 369
            G  GPA    + ++   P                       P  MK L WN RGL  P 
Sbjct: 306 SG--GPA----YADVSWQPGL---------------------PGPMKILSWNCRGLSTPS 365

Query: 370 AIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVPAIGLSGGLLLFWSSS 429
           AI  LR+      P I+F+ E+      ++++++ L +  CL V   G SGGL + W  +
Sbjct: 366 AIPNLRNVAQGHQPDILFLSETLSKAQSMERVRVMLQYSSCLSVDVEGRSGGLSVMWRDT 425

Query: 430 LDVKVVSYSQGHIDILIND-FFGRWRFTGFYGNPVQSKRRDSWNLLKRLAGCSNLPWMLG 489
            + ++++YS+  I+++++D   G WR T +YG P +S+RR +W+LL+ L   S+LPW + 
Sbjct: 426 TNCRIMNYSRNFINLIVDDPVKGEWRLTCYYGYPERSRRRQAWDLLRELRDMSDLPWCIV 485

Query: 490 GDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGDRFTWIKNKKSISATRVR 549
           GDFN++L  E++             FR A+++C LID+   G  FTW+K++ +      R
Sbjct: 486 GDFNDLLSQEDKKGTLPHPNWLCNGFRSAVSDCDLIDIQLQGYPFTWVKSRGTPHVIEER 545

Query: 550 LDRYFANP-------------LFISKSEGSMIF-----------NYSKKIIRFEDSWAKF 609
           LDR   N              L  S S+ S I            NYS    RFE+ W K 
Sbjct: 546 LDRAMVNSDWLALYPDVNLLNLLTSHSDHSPILIQSSPMTRNGKNYS---FRFENHWLKE 605

Query: 610 NGCKEVLRKNWEMGGTLGNSVCNLIFRIKGSLFEMANWNKDRLKGSIRQAILNKENSVSL 669
           +  +EV+++ W +GG  G  + +   RI     ++  W + R +   +Q I+     +  
Sbjct: 606 DDVEEVVKEGWRVGG--GGEITS---RISLCADKLKGWGR-RKRMRFKQEIIECSEEMER 642

Query: 670 LMANSGGIRSDEIINIENDIERLLEEEEIFWKQRS-LRW 674
           L  N   + S     +E    +LL +EE +W+QR+ + W
Sbjct: 666 LRGNHDSMYSGRYKEVEEKHAKLLVQEEAYWRQRAKMHW 642

[Close]

BLAST of Sed0000842 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-18
Identity = 89/348 (25.57%), Postives = 157/348 (45.11%), Query Frame = 0


Query: 716  GTNDEVMWNDCKKGIFSVKSAYHVGINLASKEKESTSDSKFTSNCWKKFWKINISSKIKL 775
            G  D + W   + G FSV+SAY +   L   E    + + F  NC    WK+ +  ++K 
Sbjct: 250  GARDRLSWKFSQDGQFSVRSAYEM---LTVDEVPRPNMASF-FNC---LWKVRVPERVKT 309

Query: 776  GAWSVLSNAIPTKSNIYLRGVDINVICPMCRKCKESNMHIIKDCKIAIRAWNLTFPWFTN 835
              W V + A+ T+   + R +  + +C +C+   ES +H+++DC   +  W    P    
Sbjct: 310  FLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQ 369

Query: 836  FKDFLKNIDKGIDFWMG---LCDKVPKEELFKGIVVIWSLWNFRNQGLNEDNSFEFHKLQ 895
               F K++ + +   +G    C+ +P   +F   V+IW  W +R   +  +N+    +++
Sbjct: 370  QGFFSKSLFEWLYDNLGDRSGCEDIPWSTIF--AVIIWWGWKWRCGNIFGENTKCRDRVK 429

Query: 896  AMMENAINAFNLLNAGPL---KKPFRVDNENIKWVAPPLGVWKMNVDASMRPSSGEGGIG 955
             + E A+  +   +   L    +P RV+   I WV+P +G  K+N D + R + G    G
Sbjct: 430  FVKEWAVEVYRAHSGNVLVGITQP-RVE-RMIGWVSPCVGWVKVNTDGASRGNPGLASAG 489

Query: 956  WVIRDWKGQVKMAGWRANFQNMSIKCLEAIALREGLIHILELQNLLLPPILVESDASEII 1015
             V+RD  G     G+  N    S    E   +  GL    E +   +P + +E D SE+I
Sbjct: 490  GVLRDCTG-AWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKK---VPRVELEVD-SEVI 549

Query: 1016 KAIANDSLDISEFSNIIVDIKH-LMALLGIVKVAHCNRLCNMVADVLA 1057
                   +  S   + +V + H  +    +V++ H  R  N +AD LA
Sbjct: 550  VGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLA 581

[Close]

BLAST of Sed0000842 vs. ExPASy TrEMBL
Match: A0A803QI56 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.2e-96
Identity = 292/1185 (24.64%), Postives = 494/1185 (41.69%), Query Frame = 0


Query: 12   NLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKLMPKIWNIDQKV 71
            N+ + D+E   +  + D D    E +    +  + LT K       +  M  +W   + +
Sbjct: 17   NVRIEDEEEDSLIYVGDAD-DLTEIDDRWCLVGRFLTNKGVDFQAMQNKMATLWQPGRGM 76

Query: 72   LIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFGFAAFWVR 131
             ++ +  N F+  F + V  DRV+E SPW +D   L+FE+L   +    +      FWV+
Sbjct: 77   YVKELDSNLFLFQFYHEVDIDRVIEGSPWTFDRVPLIFERLKQGEDPRMITLNKLDFWVQ 136

Query: 132  LHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIRLPLRRALKV-K 191
            +H++      E   + LGN +G FI  D          +LR++V I+I  PL+R  KV K
Sbjct: 137  IHNLTTGFMLERVVRDLGNYVGTFIKTDPNNFIGVWRDYLRVRVKINIECPLKRRKKVEK 196

Query: 192  SGAMANEKWVRISYEKLPDFCKGCGRIGHQANGC-------------------------- 251
             G +    +    YE L  FC   G +GH    C                          
Sbjct: 197  QGGV--HCYANFKYEGLSTFCFIGGILGHSERFCEQLFHTPLDQIQKPYTLELKATPRRK 256

Query: 252  SYVESIFWARSG--------------TEKEEQCRVDLNQ-INDMAEK--------GHVVT 311
            +Y     W RSG              T  E    ++ NQ IN+   +         ++ +
Sbjct: 257  NYAIGERWLRSGAASRVGGMAFSDHATTGERSTPINGNQTINNHGRQSRLNHIPPNNLGS 316

Query: 312  FKKEKVIEKGKGKVISEGSNDFLFGLFDIHMKAHQHLDNGGFRGPAKRV----------- 371
               + + E+G   +++        G   I   + +    G     +  +           
Sbjct: 317  SSNQSINERGNSNMMANSLPQLKEGGAIIDQPSMKETIVGDTALKSNMINKETSILILDT 376

Query: 372  ------VFKELDLMPNY-NKGSVQLNLSCINDKAKTVVSPDAMKTLCWNARGLKNPRAIR 431
                  +   L L  N  N   V++      D       P  M  L WN RGL N RAI+
Sbjct: 377  KRRRTDIVNGLGLDNNLDNNTHVEVTNEEFGDVGPIQGPPGIMNVLSWNCRGLGNQRAIQ 436

Query: 432  ALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVPAIGLSGGLLLFWSSSLDV 491
             L+  V +  P  +F+CE+KC +  ++ +   L F+    V A G SGGL L W +  D 
Sbjct: 437  FLKEIVSQKNPNFIFLCETKCDKKRIESMGRMLKFEGVFGVEAQGSSGGLALLWKNKDDG 496

Query: 492  KVVSYSQGHIDILI-NDFFGRWRFTGFYGNPVQSKRRDSWNLLKRLAGCSNLPWMLGGDF 551
             V+ YS  HID L+ +   G W+ TGFYG P ++ R  SW LL+ LA  S LPW + GD 
Sbjct: 497  HVLGYSNNHIDFLVESSEKGAWKLTGFYGEPERNNRHRSWTLLRTLATDSTLPWCVIGDL 556

Query: 552  NEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGDRFTWIKNKKSISATRVRLDR 611
            N I+  E++  G    +  ++ F++A+N+C+LID+   G  FTW K + S +   VRLDR
Sbjct: 557  NNIVRHEDKRGGRPYPQRLIDGFQQALNDCNLIDMELVGHPFTWEKGRGSRNWIEVRLDR 616

Query: 612  YFANPLFISKSEGSMIFNY---------------------SKKIIRFEDSWAKFNGCKEV 671
               N  +    +G+ + N                      + +  +FE++W K   C E+
Sbjct: 617  ALINDAWSQIFQGASLINLEISSSDHCPIFLEPEINHCFPTNRKFKFENAWLKEPMCFEI 676

Query: 672  LRKNWEMGGTLGNSVCNLIFRIKGSLFEMANWNKDRLKGSIRQAILNKENSVSLLMANSG 731
            +R  WE  G       NL  ++     +++ W K+ + G+ +  I   +N +  L     
Sbjct: 677  VRDCWESEGD-----DNLPNKLARCADKLSIWGKE-VTGNFKARITRCKNEIKRLANKRD 736

Query: 732  GIRSDEIINIENDIERLLEEEEIFWKQR-------------SLRW-------------DW 791
                     ++ ++  +L++ E FWKQR             S RW              W
Sbjct: 737  TASIQRHKEVKEELFHVLDQRESFWKQRSKQLWLKEGDHNSSTRWCVFDGEEINVLKEPW 796

Query: 792  ----------------KNRSVAELMARDGG-WNKELIYNIFCKDDANIIVNTPLSKFGTN 851
                                V  LM  +GG W+ +++ ++F + D  +I++ PL+    N
Sbjct: 797  LPSEDDPYVHSHHPSLGEAKVRNLMVMEGGSWDVDILNDLFIERDKKLILDIPLNISHGN 856

Query: 852  DEVMWNDCKKGIFSVKSAYHVGINLASKEKESTSD-SKFTSNCWKKFWKINISSKIKLGA 911
            D++ W+    GI+SVKS Y++   +  +   +  D +KF    W KFWK  I  K+K   
Sbjct: 857  DKLTWSYESSGIYSVKSGYNLLQKIHGRWDGNEDDLTKF----WTKFWKQKIPPKVKNLV 916

Query: 912  WSVLSNAIPTKSNIYLRGVDINVICPMCRKCKESNMHIIKDCKIAIRAWNLTFPWFTNFK 971
            W      +PT   + ++ VD+   CP+C    ES +H +  C    + W+      T   
Sbjct: 917  WRAARECLPTLQQLKIKRVDVQTSCPVCHSEDESVIHALITCTKVKQVWDRVGIGITTAA 976

Query: 972  DFLKNIDKGIDFWMGLCDKVPKEELFKGIVVIWSLWNFRNQGLNEDNSFEFHKLQAMMEN 1031
               +N    +D+++        E+     V+ W++W+ RN  + +  S     +  +   
Sbjct: 977  AEPENF---LDWFVAAFTAAEAEKKLLLPVLCWAIWSARNDVVWQKKSVTAASIVVLATG 1036

Query: 1032 AINAFNLLNAGPLKKPF---RVDNENIKWVAPPLGVWKMNVDASMRPSSGEGGIGWVIRD 1060
             +  +       ++  +   + D+    W  P +   K+NVDA++  S  + G G V RD
Sbjct: 1037 YLEQWKNAQNSRIETSWSGLKADDGAEHWTVPSIDHIKVNVDAALFDSGNKYGCGLVARD 1096

[Close]

BLAST of Sed0000842 vs. ExPASy TrEMBL
Match: A0A2N9GJ35 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27322 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-77
Identity = 205/714 (28.71%), Postives = 330/714 (46.22%), Query Frame = 0


Query: 5   QFAQMMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKLMPKI 64
           +  ++ + ++L ++E   +  L  + I   + E ++ +  KLLT K    + FK  +  +
Sbjct: 4   ELEELCRRMKLSEKEMLRI-SLRKDPILKSKKEAQHSILFKLLTTKPFHSEAFKGSIRAL 63

Query: 65  WNIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFG 124
           W+    V I S+ GN F+  F      +R+   SPW +D  ++   +  GD + +E+ F 
Sbjct: 64  WSGLGGVTIRSIEGNLFMAVFTRRDDMERIFVRSPWTFDKKLIPIVRFEGDLQPTEVRFS 123

Query: 125 FAAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIRLPLR 184
             AFW+R+ ++P         + +G  +G+ +  D   +    G++LRI+V IDI  PL 
Sbjct: 124 HTAFWIRVFNLPIKSMIREVGEDIGQEIGRLLEVDVPENGFGWGEYLRIRVEIDIAQPLL 183

Query: 185 RALKVKSGAM--ANEKWVRISYEKLPDFCKGCGRIGHQANGC------------SYVESI 244
           R   ++S         WV   YE LP FC  CGR+GH ++ C            S  +  
Sbjct: 184 RGCILQSDESDGGGLFWVDFKYEHLPIFCYRCGRLGHGSHECVVGRGGRISEGVSGEKWG 243

Query: 245 FWARSGTEKEEQCRVDLNQINDMAEKGHV-VTFKKEKVIEKGKGKVISEG-----SNDFL 304
            W R+   +  Q R     +    E+G   + F +E   E      +S G        +L
Sbjct: 244 AWLRALAARPAQPRRSREGVFQPDEEGESNMPFDREAATENDPSPPVSGGGCKLWDGHWL 303

Query: 305 FGLFDIHMKAHQHLDNGGFRGPAKRVVFKELDLMPNYNKGSVQLNLSCINDKAKTVVSPD 364
             L +  M+   H++      PA                        C + K      P 
Sbjct: 304 HELLEEIMQLEMHVER-----PA------------------------CSSGKD---APPV 363

Query: 365 AMKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCV 424
            M+ L  N RGL NP+ +  L + V K  P IVF+ E++     ++ L++ L    CL V
Sbjct: 364 TMRALSLNCRGLGNPQTVNELHNLVKKEGPNIVFLMETRLNVRNLEWLRVRLGMKGCLGV 423

Query: 425 PAIGLSGGLLLFWSSSLDVKVVSYSQGHID--ILINDFFGRWRFTGFYGNPVQSKRRDSW 484
              G  GGL L W SS+ + + SYS+ HID  ++ ND   RWR TGFYG P    R  SW
Sbjct: 424 ERHGQGGGLALLWDSSVMINIQSYSEHHIDGEVVQNDGL-RWRLTGFYGYPEAHLRHRSW 483

Query: 485 NLLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGD 544
           +LL+ L   S++PWM+ GDFNEI   EE+    +RN   M  FREA+ +CSL D+GF+G 
Sbjct: 484 SLLRHLRSISDVPWMIFGDFNEITRLEEKAGREDRNANQMAAFREALLDCSLQDMGFTGT 543

Query: 545 RFTWIKNKKSISATRVRLDRYFA-------------NPLFISKSE-------------GS 604
            FTW  N+++    RVRLDR  A             N L ++ S+              +
Sbjct: 544 EFTWSNNRENGDLVRVRLDRGVADAAWVQLFPHASINHLIVASSDHVGLLLDSRTDQPRN 603

Query: 605 MIFNYSKKIIRFEDSWAKFNGCKEVLRKNWEMGGTLGNSVCNLIFRIKGSLFEMANWNKD 664
            +    +++ RFE SW K +GC+EV++  WE+   +G ++  +  +IK    ++  W++ 
Sbjct: 604 HVPQRKRRMFRFEKSWLKESGCEEVIQMAWEV-QPIGTAMYKVAQKIKQCRIKLIQWSQS 663

Query: 665 RLKGSIRQAILNKENSVSLLMANSGGIRSDEIINIENDIERLLEEEEIFWKQRS 671
            ++ + +      +    L +       S +I  I+ D+  L E+ EI W+QRS
Sbjct: 664 HVRVTPKLIDSKMKQLQELELKEKEDYDSRQINLIKRDLNGLHEKAEIVWRQRS 682

[Close]

BLAST of Sed0000842 vs. ExPASy TrEMBL
Match: A0A2N9EEA9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.6e-76
Identity = 223/816 (27.33%), Postives = 353/816 (43.26%), Query Frame = 0


Query: 1   MDAFQFAQMMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKL 60
           MD+       +   L + EA G F++E++ +          +  KL+T K+ +    K  
Sbjct: 1   MDSEALLDDWRKFSLTEDEAPG-FDVEEDAMGNSRELGSKCLVGKLVTAKYFNRAALKTT 60

Query: 61  MPKIWNIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISE 120
           M ++W   + +   S+  N FV  F NA  R RVL+ SPW++DN +L+   + G    S+
Sbjct: 61  MLRLWGTSRGITATSIDANLFVFQFPNAQERQRVLDGSPWLFDNCLLILNVIDGTIPASQ 120

Query: 121 MEFGFAAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIR 180
           ++   + FWV+LH +P    T  + + +G++ G+ +  D        G  LRI+V +DI 
Sbjct: 121 VQMQRSCFWVQLHGIPLFYMTRETGERVGSIFGEVMKVDVPKTGVGWGCALRIRVPVDIS 180

Query: 181 LPLRRALKVKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGC------------SYVE 240
            P  R   V   ++  + WV   YE+LP  C  CG IGH    C            S+ +
Sbjct: 181 RPFPRGYLVTFKSI-GQMWVSFKYERLPWICFHCGYIGHLERDCMVKRKAGLQAGSSFKQ 240

Query: 241 SIFWAR------------SGTEK---EEQCRVD-------------LNQINDMAEKGHVV 300
              W R            +GT +    E  RVD             L Q++D+ E     
Sbjct: 241 YGPWLRAAESTARWRGFEAGTRQSLFRETGRVDSACESSKLEPWEPLKQMDDLGEDHGDA 300

Query: 301 TFKKEK----VIEKG------------------KGKVISEGSNDFL---------FGLFD 360
               +K    V+E G                   G  +S  +   L          GL  
Sbjct: 301 GMSPQKMVAEVVESGDSSRAESSMQKTIPRDQEMGSPLSSHARGSLGEHPLPAPGSGLST 360

Query: 361 -----IHMKAH----------------------------QHLDNGGFRGPAKRV------ 420
                +H + H                            ++   G   G A+ V      
Sbjct: 361 KVANCMHERVHGDNGPHTQTVEGEMIIQNSMHYVEKVEPRNTQTGVSLGDAENVGGQTSS 420

Query: 421 VFKELDLMPNYNKG-----------SVQLNLSCINDKAKTVVSPDA-MKTLCWNARGLKN 480
             K+    P  NK            S  +N   +    +   SP A M+ L WN RGL N
Sbjct: 421 TSKKFPQSPKKNKSTWKKVVRARGKSTPVNRGALKRWLEADESPPAPMRLLSWNCRGLGN 480

Query: 481 PRAIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVPAIGLSGGLLLFWS 540
           P+ +R L   + +  P I+F+ E++     V+ L++S  F+   CVP +   GGL + WS
Sbjct: 481 PQTVRELSLLLKERDPSILFLSETRLDSVGVELLRVSTKFNYAFCVPRLRTGGGLAMLWS 540

Query: 541 SSLDVKVVSYSQGHID--ILINDFFGRWRFTGFYGNPVQSKRRDSWNLLKRLAGCSNLPW 600
             +D+++ S+S+ HID  ++I D    +R TGFYGNP   KR+++W LLK L+   +LPW
Sbjct: 541 DKVDLRLNSFSKNHIDASVVIKDSGKEFRVTGFYGNPETHKRKETWALLKFLSHHGSLPW 600

Query: 601 MLGGDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGDRFTWIKNKKSISAT 660
           +  GDFNE+L   E    + R    + DFREA+    L DLGF G  FTWIK +K  +  
Sbjct: 601 VCMGDFNELLDHSECTGTARRPDWQIRDFREALAFAQLFDLGFEGSPFTWIKGRKGPTFK 660

Query: 661 RVRLDRYFANPLFISKSEGSMIFNYSK----------------------KIIRFEDSWAK 671
             RLDR  A+  +I+  EG+ + + +K                      ++ RFE  W K
Sbjct: 661 AERLDRIVASMAWINMFEGAKVIHLAKLSSDHCPLMLEFLQVLERVQRHRVFRFEAMWVK 720

[Close]

BLAST of Sed0000842 vs. ExPASy TrEMBL
Match: A0A2N9HND5 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41125 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.1e-75
Identity = 222/816 (27.21%), Postives = 353/816 (43.26%), Query Frame = 0


Query: 1   MDAFQFAQMMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKL 60
           MD+       +   L + EA G F++E++ +          +  KL+T K+ +    K  
Sbjct: 1   MDSEALLDDWRKFSLTEDEAPG-FDVEEDAMGNSRELGSKCLVGKLVTAKYFNRAALKTT 60

Query: 61  MPKIWNIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISE 120
           M ++W   + +   S+  N FV  F NA  R RVL+ SPW++DN +L+   + G    S+
Sbjct: 61  MLRLWGTSRGITATSIDANLFVFQFPNAQERQRVLDGSPWLFDNCLLILNVIDGTIPASQ 120

Query: 121 MEFGFAAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIR 180
           ++   + FWV+LH +P    T  + + +G++ G+ +  D        G  LRI+V +DI 
Sbjct: 121 VQMQRSCFWVQLHGIPLFYMTRETGERVGSIFGEVMKVDVPKTGVGWGCALRIRVPVDIS 180

Query: 181 LPLRRALKVKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGC------------SYVE 240
            P  R   V   ++  + WV   YE+LP  C  CG IGH    C            S+ +
Sbjct: 181 RPFPRGYLVTFKSI-GQMWVSFKYERLPWICFHCGYIGHLERDCMVKRKAGLQAGSSFKQ 240

Query: 241 SIFWAR------------SGTEK---EEQCRVD-------------LNQINDMAEKGHVV 300
              W R            +GT +    E  RVD             L Q++D+ E     
Sbjct: 241 YGPWLRAAESTARWRGFEAGTRQSLFRETGRVDSACESSKLEPWEPLKQMDDLGEDHGDA 300

Query: 301 TFKKEK----VIEKG------------------KGKVISEGSNDFL---------FGLFD 360
               +K    V+E G                   G  +S  +   L          GL  
Sbjct: 301 GMSPQKMVAEVVESGDSSRAESSMQKTIPRDQEMGSPLSSHARGSLGEHPLPAPGSGLST 360

Query: 361 -----IHMKAH----------------------------QHLDNGGFRGPAKRV------ 420
                +H + H                            ++   G   G A+ V      
Sbjct: 361 KVANCMHERVHGDNGPHTQTVEGEMIIQNSMHYVEKVEPRNTQTGVSLGDAENVGGQTSS 420

Query: 421 VFKELDLMPNYNKG-----------SVQLNLSCINDKAKTVVSPDA-MKTLCWNARGLKN 480
             K+    P  NK            S  +N   +    +   SP A M+ L WN RGL +
Sbjct: 421 TSKKFPQSPKKNKSTWKKVVRARGKSTPVNRGALKRWLEADESPPAPMRLLSWNCRGLGD 480

Query: 481 PRAIRALRHEVLKVTPQIVFVCESKCGENVVDKLKISLNFDCCLCVPAIGLSGGLLLFWS 540
           P+ +R L   + +  P I+F+ E++     V+ L++S  F+   CVP +   GGL + WS
Sbjct: 481 PQTVRELSLLLKERDPSILFLSETRLDSVGVELLRVSTKFNYAFCVPRLRTGGGLAMLWS 540

Query: 541 SSLDVKVVSYSQGHID--ILINDFFGRWRFTGFYGNPVQSKRRDSWNLLKRLAGCSNLPW 600
             +D+++ S+S+ HID  ++I D    +R TGFYGNP   KR+++W LLK L+   +LPW
Sbjct: 541 DKVDLRLNSFSKNHIDASVVIKDSGKEFRVTGFYGNPETHKRKETWALLKFLSHHGSLPW 600

Query: 601 MLGGDFNEILLFEEQLNGSERNKVGMEDFREAINECSLIDLGFSGDRFTWIKNKKSISAT 660
           +  GDFNE+L   E    + R    + DFREA+    L DLGF G  FTWIK +K  +  
Sbjct: 601 VCMGDFNELLDHSECTGTARRPDWQIRDFREALAFAQLFDLGFEGSPFTWIKGRKGPTFK 660

Query: 661 RVRLDRYFANPLFISKSEGSMIFNYSK----------------------KIIRFEDSWAK 671
             RLDR  A+  +I+  EG+ + + +K                      ++ RFE  W K
Sbjct: 661 AERLDRIVASMAWINMFEGAKVIHLAKLSSDHCPLMLEFLQVLERVQRHRVFRFEAMWVK 720

[Close]

BLAST of Sed0000842 vs. ExPASy TrEMBL
Match: A0A2I4F3F9 (uncharacterized protein LOC108995141 OS=Juglans regia OX=51240 GN=LOC108995141 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.8e-75
Identity = 186/581 (32.01%), Postives = 287/581 (49.40%), Query Frame = 0


Query: 1   MDAFQFAQMMKNLELVDQEAQGVFELEDNDISAYESELENVVACKLLTEKHSSPDVFKKL 60
           MD+ +  +  K L L++ E   + EL+++  +    + +  V  K+ + +  S +V    
Sbjct: 1   MDSLE--EKWKGLRLLEDENASI-ELDEDTTTELIYKEQRTVLGKIFSSRIISKEVLGST 60

Query: 61  MPKIWNIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISE 120
           M K+W I +      V  NTF   F N   + RV E  PW++DN VL+ ++  G K +  
Sbjct: 61  MAKVWKISKAAKFTEVCPNTFAIIFENVADKMRVWEGRPWLFDNQVLVMKEFEGYKPLHS 120

Query: 121 MEFGFAAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIR 180
           + F    FW+R+H++P +C T+   + +G  +GK    D + D    G FLR++V +D+ 
Sbjct: 121 VSFDSECFWIRIHNLPISCMTKVKGEQIGGTVGKVERVDVQEDGSGWGNFLRVQVLLDLT 180

Query: 181 LPLRRALKVKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGCSYVE------SIFWAR 240
            P+ R   +      N  W   SYEKLP  C  CG + H  NGCS  +         W R
Sbjct: 181 KPVARGRTLT--VRGNRFWAPFSYEKLPKICFSCGCMVHGVNGCSGGQGNNEEMEDKWKR 240

Query: 241 SGTEKEE-----QCRVDLNQINDMAEKGHVVTFKKEKVIEKGK-GKVISEGSNDFLFGLF 300
              +KE        +   N +    ++G   T KKEK  E+ + GK + E + D      
Sbjct: 241 ESEKKENLETRAGAKEGKNGLGSDEDEGQ--TRKKEKGREESEGGKDLEEENGDREDE-- 300

Query: 301 DIHMKAHQHLDNGGFRGPAKRVVFKELD-------LMPNYNKGSVQLN---------LSC 360
            +  +  +  D       ++ +V K L+        + +  KG + +             
Sbjct: 301 GMMRRGEERWDKQATEEESENMVDKALEETYGQMVEVSSEGKGGIGVEDHPKKKGEWKRR 360

Query: 361 INDKAKTVVS-----PDAMKTLCWNARGLKNPRAIRALRHEVLKVTPQIVFVCESKCGEN 420
              K K VVS     P+ MK L WN RGL NPR ++ L + V K  P +VFV E+K  + 
Sbjct: 361 ARAKGKQVVSDYPIPPNIMKILSWNCRGLGNPRTVQDLYNMVEKNKPSLVFVMETKSLKK 420

Query: 421 VVDKLKISLNFDCCLCVPAIGLSGGLLLFWSSSLDVKVVSYSQGHIDILI-NDFFGRWRF 480
             D L+  L  + C  V A+G  GGL+L W+S +  ++V+YSQ HI++ I  +   +W  
Sbjct: 421 SFDSLRRRLQCEGCFVVEAVGKGGGLVLLWNSDVRAEIVNYSQSHINVWIEEEGEKKWLL 480

Query: 481 TGFYGNPVQSKRRDSWNLLKRLAGCSNLPWMLGGDFNEILLFEEQLNGSERNKVGMEDFR 540
           T FYG P  +KR++SW+LL  L   +N+ W + GDFNEIL  +E+  G  R +  ME FR
Sbjct: 481 TCFYGQPDTNKRKESWSLLNSLKPAANIGWCIVGDFNEILTNDEKWGGRARPEGQMELFR 540

Query: 541 EAINECSLIDLGFSGDRFTWIKNKKSISATRVRLDRYFANP 548
           E +NE +L DLG+ GD+FTW  +    + T+ RLDR  A P
Sbjct: 541 EVMNEGNLYDLGWKGDKFTWSNSHGDDTFTKERLDRAVATP 572

[Close]

BLAST of Sed0000842 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 7.7e-25
Identity = 97/386 (25.13%), Postives = 170/386 (44.04%), Query Frame = 0


Query: 680  VAELMARDG-GWNKELIYNIFCKDDANIIVNTPLSKFGTNDEVMWNDCKKGIFSVKSAYH 739
            V++L+   G  W K++I  +F + +  +I           D   W+    G ++VKS Y 
Sbjct: 171  VSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYW 230

Query: 740  VGINLASKEKESTSDSKFTSN-CWKKFWKINISSKIKLGAWSVLSNAIPTKSNIYLRGVD 799
            V   + +K       S+ + N  ++K WK   S KI+   W  LSN++P    +  R + 
Sbjct: 231  VLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLS 290

Query: 800  INVICPMCRKCKESNMHIIKDCKIAIRAWNLTFPWFTNFKDFLKNIDKGIDFWMGLCDKV 859
                C  C  CKE+  H++  C  A   W ++        ++  +I   + +   L +  
Sbjct: 291  KESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGN 350

Query: 860  PKEELFKGIV--VIWSLWNFRNQGLNEDNSFEFHKLQAMMENAINAFNLLNAGPL--KKP 919
            P+ E    +V  ++W LW  RN+ +     F   ++    E+ +  + +         KP
Sbjct: 351  PQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKP 410

Query: 920  FRVDNENIKWVAPPLGVWKMNVDASMRPSSGEGGIGWVIRDWKGQVKMAGWRANFQNMSI 979
                +   +W  PP    K N DA+    +   GIGWV+R+ KG+VK  G RA  +  S+
Sbjct: 411  QVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSV 470

Query: 980  KCLEAIALREGLIHILELQNLLLPPILVESDASEIIKAIANDSLDISEFSNIIVDIKHLM 1039
               E  A+R     +L L       ++ ESD+  +I+ + ND +  S     I D++ L+
Sbjct: 471  LEAELEAMRWA---VLSLSRFQYNYVIFESDSQVLIEILNNDEIWPS-LKPTIQDLQRLL 530

Query: 1040 ALLGIVKVAHCNRLCNMVADVLAKQS 1060
            +    VK     R  N +A+ +A++S
Sbjct: 531  SQFTEVKFVFIPREGNTLAERVARES 552

[Close]

BLAST of Sed0000842 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-11
Identity = 66/304 (21.71%), Postives = 116/304 (38.16%), Query Frame = 0


Query: 763  KFWKINISSKIKLGAWSVLSNAIPTKSNIYLRGVDINVICPMCRKCKESNMHIIKDCKIA 822
            K WK+  + KIK   W +LS A+ T  N+  R +  +  C  C +  E++ H+  DC  A
Sbjct: 17   KIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYA 76

Query: 823  IRAWNLTFPWFTNFKDFLKNIDKGIDFWMGLCDKVPKEELFK-GIVVIWSLWNFRNQGLN 882
             + W  +       +     ++  ++  +  C    + +LF   I ++W LW  RNQ + 
Sbjct: 77   QQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVF 136

Query: 883  EDNSFEFHKLQAMMENAINAFNLLNAGPLKKPFRVDNE--------NIKWVAPPLGVWKM 942
            +  S  +        N +  +   N        +V +           KW  PP    K 
Sbjct: 137  QQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKY 196

Query: 943  NVDASMRPSSGEGGIGWVIRDWKGQVKMAGWRANFQNMSIKCLEAIALREGLIHILELQN 1002
            N D +    +     GW++RD  G    +G             E  AL   +I +    +
Sbjct: 197  NYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQAL---IIAMQHAWS 256

Query: 1003 LLLPPILVESDASEIIKAIANDSLDISEFSNIIVDIKHLMALLGIVKVAHCNRLCNMVAD 1058
                 ++ E D+ ++ + + N+ L+   F N I + +               R  N  AD
Sbjct: 257  QGYRKVIFEGDSKQVEELMNNEKLNFGRF-NWIREGRFWQKRFEEAVFKWVPRTNNQPAD 316

[Close]

BLAST of Sed0000842 vs. TAIR 10
Match: AT1G40390.1 (DNAse I-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 7.2e-07
Identity = 31/102 (30.39%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 455 QSKRRDSWNLLKRLAGCS---NLPWMLGGDFNEILLFEE--QLNGSERNKVGMEDFREAI 514
           +++RR  W+ + RL+  S   N PW++ GDFN+I    E   L  S  +  G+ED +  +
Sbjct: 98  EAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACM 157

Query: 515 NECSLIDLGFSGDRFTWIKNKKSISATRVRLDRYFANPLFIS 552
            +  L+DL   G  +TW  +++     R +LDR   N  +++
Sbjct: 158 RDSDLVDLPCRGVLYTWSNHQQDNPILR-KLDRAIVNGCWLA 198

[Close]

BLAST of Sed0000842 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-06
Identity = 33/159 (20.75%), Postives = 64/159 (40.25%), Query Frame = 0


Query: 66  NIDQKVLIESVGGNTFVCTFVNAVVRDRVLEASPWIYDNAVLLFEKLTGDKRISEMEFGF 125
           N+D++V+   +  +     F +      +L   PW +++ + + ++ T  K  S+ EF  
Sbjct: 47  NVDEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQRWT--KLHSDAEFKR 106

Query: 126 AAFWVRLHDVPPACHTENSAKGLGNLMGKFIIWDYEGDQRNRGKFLRIKVYIDIRLPLRR 185
             FW+++  +P    T      +G  MG F+       + N G+ + +            
Sbjct: 107 IPFWIQIRGIPLRFLTARIITSIGERMGLFL-------ETNLGRDVSV------------ 166

Query: 186 ALKVKSGAMANEKWVRISYEKLPDFCKGCGRIGHQANGC 225
                         ++  YEKL +FC  CG + H A+ C
Sbjct: 167 --------------LKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Sed0000842 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7824053.1	5.6e-86	25.76	hypothetical protein G2W53_022197 [Senna tora]	[more]
XP_018826186.1	9.9e-75	32.01	uncharacterized protein LOC108995141 [Juglans regia] >KAF5471486.1 hypothetical ...	[more]
KAF8408042.1	7.8e-72	27.64	hypothetical protein HHK36_007182 [Tetracentron sinense]	[more]
KAG2663507.1	3.0e-71	26.07	hypothetical protein I3760_16G033000 [Carya illinoinensis]	[more]
PNY16372.1	1.8e-68	27.61	ribonuclease H, partial [Trifolium pratense]	[more]

BLAST of Sed0000842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	3.0e-18	25.57	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Sed0000842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803QI56	2.2e-96	24.64	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2N9GJ35	1.3e-77	28.71	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27322 PE=3 SV=1	[more]
A0A2N9EEA9	5.6e-76	27.33	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 ...	[more]
A0A2N9HND5	2.1e-75	27.21	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4112...	[more]
A0A2I4F3F9	4.8e-75	32.01	uncharacterized protein LOC108995141 OS=Juglans regia OX=51240 GN=LOC108995141 P...	[more]

BLAST of Sed0000842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	7.7e-25	25.13	Ribonuclease H-like superfamily protein	[more]
AT3G25270.1	1.7e-11	21.71	Ribonuclease H-like superfamily protein	[more]
AT1G40390.1	7.2e-07	30.39	DNAse I-like superfamily protein	[more]
AT3G42140.1	3.6e-06	20.75	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 35..175 e-value: 1.5E-21 score: 76.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 341..565 e-value: 7.0E-24 score: 86.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 339..555
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 929..1060 e-value: 1.9E-11 score: 46.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 934..1058 e-value: 3.0E-19 score: 69.1
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 177..226 e-value: 1.2E-11 score: 44.1
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 731..826 e-value: 1.1E-13 score: 51.7
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 11..226
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 11..226
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 934..1057 e-value: 9.45561E-22 score: 89.6808
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 930..1059

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000842.1	Sed0000842.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity