Sed0000822 (gene) Chayote v1

Overview
NameSed0000822
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG08: 36122412 .. 36125370 (-)
RNA-Seq ExpressionSed0000822
SyntenySed0000822
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTCCATGCTCCACGCCATTTCTTCTTGTTCGCACCTGAAGTGTCGCCGCCGCCTCTCTCCCGATCACTGCTGCCGTCGCCGTCGCCGTCGTATTTCTTCCTTTTGTGCCGCCGAATCCTTTCTCCTAACTGGTTTTGGTTTGCACTGGATTTCATACTCCATTGTTGTTTCTGGTATTCTGTCTTTCTTCTCGCTTCAAAAACCCTAATTAGAATTTTTCTTTTGAAACAATTGAGGAGCTGTTTGATTTTGTTTTCCACCCTCAATAAAACACAGCCGAATTGTAACGAAAATAGAAACAGCCTTACAGCTAATTGGGACTTTCTTCTATATTGTGCCCTTTATATTTCCTACTGATATAGATTCTAAGGTATTAATCTTTCCAAAGCTTAGAAAAATTTGTTTGCGGGATGAGATACTTCCAAAGCTTAGACAAAAAGAATGGGGACGAGGAAATTGGTTCAAATACTACACTTAGACTTAGTACATTGCTATGTCAACATAAATCCCGATGTGTCGCCAAGCGATGATGCAGTAGTTGAAGGCTTGCATCTTCAAGGTCGCAAGTTTGGGACTCACCTATGACATTAATTTGGTTATAGTGCCTACGATTTTTCGGTTTCCAGAAAAAAAAGATAAATCCTGATTTTTTTTTTCTTTTCCATATCTAGGTAAGCTTTGACCCACTATATGCACGAGGCACATGTGTTCGTCCTAAAGCCCAGTTGAGAGACAACAATTGATTTTATAATTAAACAAAATTTCTAAAAAGATATTGATAACTATAAGTTCACTACTATCATCACTAATAAGATTGAGGTACTGTATAAATTTTTGTAGCTAATATTTTTTAAAGCATATGTAGTAAAAGTAGTAATAGTTTAAACTTTAAATTGTTACGATTCAAACCTTAATTTTTTTAGGAATTGAGAAAATTAATATTATTCTTTTAATCATTATACGTATCGTACAAATTTTAAGACCCAGTGCATTGAGGCTAAGAGTAGTTTTGCCTCAAGATGTAAGTTTCAATAGCTTTTTAAAACATTGCTTGTGGATGCACTATTGTAATTTGTTGTTAAAAAACACTGGTTGTTTTAGTTCAATTGAACATTCATTCTCTGGTGTCAAAAAGTGAGAGTTTCTATTCAGTTAGTACTTAGTACGAGACCCAAAAACACATATCCTTATTTGCTTTAGCTTTTTATTATTTTCTCCCGTGTATTTTACTGCTTTCAGTAGCAAGTTTTTCCTTCATTAGTTGTCAAGAAACTTGATCTGTATTGAAATGCTAATGAACTATCTAAGATTCTATAGTTATCTTCTCTAAAACAATTAAACCTTGGTGATATGAATCTTTGGTTTGATGTATTTATTGGCATCTCTTATCGAACTTCAAACTTTCCAAGAGTACATATGCACTACCATAATTTTTTTTGCATAGGAAACTATGGATTTTAAAATATTGAAAATGGTTCATATGCTTCAGGTTCAATCGGAAGTTAGCAAGTCTGATGCTTTAAGAAAGAGAGGAAGAATGAGCAGTAAAGCTATGTTTAAATGGTCAAAAACAATCACACCTTCCCATGTTGAACAGCTTATCCGAGCGGAACGAGACACAAACAAGGCACTTCTCATATTTGACTCTGCAACAGCCGAATATACAAATGGTTTTAAGCACGATCTCAATACTTTTAGGCTCATGATTAGTAAGTTAGTTTCTGCAAACCAGTTCAGGTCAGCTGAAGCACTTCTTGATAGGATGAAGGAAGAGAAATTTGATGTCACTGAGGATGTATTTCTTTCTATTTGTAGGGCTTATGGTCGTGTCCATCAGCCATTGGATTCCATTAGAGTTTTTCACAAAATGCAGGATTTCCATTGCAAGCCTACACAGAAATTTTACATCACAGTGTTTGACATTCTTGTTGAAGAAAATCAATTAAAATTGGCTTTTAGATTTTATAGATACATGAGAAAAATGGGTATCCCCCCTACTGTAACTTCTGTTAATGTTCTAATCAAAGCCTTCTGTAAGAATAGTGGAACCATGGATAAGGCGATGCACATATTTCGTGAAATGCCTGATCATGGGTGTGAACCTGATTCATATACGTATGGAACTCTGATTAATGGGCTATGTAGATTGGGAAACATTGTTGAAGCAAAGGAATTATTGCAAGAGATGGAGACAAAAGGTTGTTCACCTTCTGTTGTCACCTATACTTCATTGATTCATGGTTTGTGTCAGTTGAACAATGTAGATGAAGCAGTGATATTACTTGAAGATATGATGGGCAAGGGTATTGAACCTAATGTGTTTACTTACAGTGCGCTAATGGATGGATTTTGCAAGGTTGGTCATTCTTTGCGAGCTAGAAACCTCTTTGAGCAGATGATCCAAAAACGCTTGAGGCCCAACATGGTCAGTTATAGTACATTGATTAATGGACTTTGTAAAGAAGGAAAACTAAATGAAGCATTAGAGATTCTTGACAGGATGAAACTTCAAGGTTTGACACCAGATGCCGGGTTGTATGGGAAAATAGTGAATGGCCTCTGTGATGTTAGCAGATTCCAAGAAGCTGCTAACTTCTTGGATGAGATGGTCGTTTCCGGAATCACCCCTAATAGATTAACATGGAGCCTTCATGTCAGGACTCATAACAGAGTAATTCATGGCCTCTGCACAATCAAAGACTCAAATCGTGCATTTCAGTTGTATCTTAGCGTGCAGACACGTGGTATTAGTATCACTGTTGATACTTTTGATTATTTATTCAAATGCTTCTGTAACAAAAGAGATCTACATAAAATTTCCAGAATTCTAGATGAGATGGTGAGTAATGGATGTTTTCCCGAGAGAGAAATGTGGACTACCATAGTTAATTGCTTTTGTGATCAAAGAGAAGCTTGTAATGCTGTGAAATTTCTGCAACTTGAGTTGATGAATTGA

mRNA sequence

TTCCTCCATGCTCCACGCCATTTCTTCTTGTTCGCACCTGAAGTGTCGCCGCCGCCTCTCTCCCGATCACTGCTGCCGTCGCCGTCGCCGTCGTATTTCTTCCTTTTGTGCCGCCGAATCCTTTCTCCTAACTGGTTTTGGTTTGCACTGGATTTCATACTCCATTGTTGTTTCTGGTTCAATCGGAAGTTAGCAAGTCTGATGCTTTAAGAAAGAGAGGAAGAATGAGCAGTAAAGCTATGTTTAAATGGTCAAAAACAATCACACCTTCCCATGTTGAACAGCTTATCCGAGCGGAACGAGACACAAACAAGGCACTTCTCATATTTGACTCTGCAACAGCCGAATATACAAATGGTTTTAAGCACGATCTCAATACTTTTAGGCTCATGATTAGTAAGTTAGTTTCTGCAAACCAGTTCAGGTCAGCTGAAGCACTTCTTGATAGGATGAAGGAAGAGAAATTTGATGTCACTGAGGATGTATTTCTTTCTATTTGTAGGGCTTATGGTCGTGTCCATCAGCCATTGGATTCCATTAGAGTTTTTCACAAAATGCAGGATTTCCATTGCAAGCCTACACAGAAATTTTACATCACAGTGTTTGACATTCTTGTTGAAGAAAATCAATTAAAATTGGCTTTTAGATTTTATAGATACATGAGAAAAATGGGTATCCCCCCTACTGTAACTTCTGTTAATGTTCTAATCAAAGCCTTCTGTAAGAATAGTGGAACCATGGATAAGGCGATGCACATATTTCGTGAAATGCCTGATCATGGGTGTGAACCTGATTCATATACGTATGGAACTCTGATTAATGGGCTATGTAGATTGGGAAACATTGTTGAAGCAAAGGAATTATTGCAAGAGATGGAGACAAAAGGTTGTTCACCTTCTGTTGTCACCTATACTTCATTGATTCATGGTTTGTGTCAGTTGAACAATGTAGATGAAGCAGTGATATTACTTGAAGATATGATGGGCAAGGGTATTGAACCTAATGTGTTTACTTACAGTGCGCTAATGGATGGATTTTGCAAGGTTGGTCATTCTTTGCGAGCTAGAAACCTCTTTGAGCAGATGATCCAAAAACGCTTGAGGCCCAACATGGTCAGTTATAGTACATTGATTAATGGACTTTGTAAAGAAGGAAAACTAAATGAAGCATTAGAGATTCTTGACAGGATGAAACTTCAAGGTTTGACACCAGATGCCGGGTTGTATGGGAAAATAGTGAATGGCCTCTGTGATGTTAGCAGATTCCAAGAAGCTGCTAACTTCTTGGATGAGATGGTCGTTTCCGGAATCACCCCTAATAGATTAACATGGAGCCTTCATGTCAGGACTCATAACAGAGTAATTCATGGCCTCTGCACAATCAAAGACTCAAATCGTGCATTTCAGTTGTATCTTAGCGTGCAGACACGTGGTATTAGTATCACTGTTGATACTTTTGATTATTTATTCAAATGCTTCTGTAACAAAAGAGATCTACATAAAATTTCCAGAATTCTAGATGAGATGGTGAGTAATGGATGTTTTCCCGAGAGAGAAATGTGGACTACCATAGTTAATTGCTTTTGTGATCAAAGAGAAGCTTGTAATGCTGTGAAATTTCTGCAACTTGAGTTGATGAATTGA

Coding sequence (CDS)

ATGAGCAGTAAAGCTATGTTTAAATGGTCAAAAACAATCACACCTTCCCATGTTGAACAGCTTATCCGAGCGGAACGAGACACAAACAAGGCACTTCTCATATTTGACTCTGCAACAGCCGAATATACAAATGGTTTTAAGCACGATCTCAATACTTTTAGGCTCATGATTAGTAAGTTAGTTTCTGCAAACCAGTTCAGGTCAGCTGAAGCACTTCTTGATAGGATGAAGGAAGAGAAATTTGATGTCACTGAGGATGTATTTCTTTCTATTTGTAGGGCTTATGGTCGTGTCCATCAGCCATTGGATTCCATTAGAGTTTTTCACAAAATGCAGGATTTCCATTGCAAGCCTACACAGAAATTTTACATCACAGTGTTTGACATTCTTGTTGAAGAAAATCAATTAAAATTGGCTTTTAGATTTTATAGATACATGAGAAAAATGGGTATCCCCCCTACTGTAACTTCTGTTAATGTTCTAATCAAAGCCTTCTGTAAGAATAGTGGAACCATGGATAAGGCGATGCACATATTTCGTGAAATGCCTGATCATGGGTGTGAACCTGATTCATATACGTATGGAACTCTGATTAATGGGCTATGTAGATTGGGAAACATTGTTGAAGCAAAGGAATTATTGCAAGAGATGGAGACAAAAGGTTGTTCACCTTCTGTTGTCACCTATACTTCATTGATTCATGGTTTGTGTCAGTTGAACAATGTAGATGAAGCAGTGATATTACTTGAAGATATGATGGGCAAGGGTATTGAACCTAATGTGTTTACTTACAGTGCGCTAATGGATGGATTTTGCAAGGTTGGTCATTCTTTGCGAGCTAGAAACCTCTTTGAGCAGATGATCCAAAAACGCTTGAGGCCCAACATGGTCAGTTATAGTACATTGATTAATGGACTTTGTAAAGAAGGAAAACTAAATGAAGCATTAGAGATTCTTGACAGGATGAAACTTCAAGGTTTGACACCAGATGCCGGGTTGTATGGGAAAATAGTGAATGGCCTCTGTGATGTTAGCAGATTCCAAGAAGCTGCTAACTTCTTGGATGAGATGGTCGTTTCCGGAATCACCCCTAATAGATTAACATGGAGCCTTCATGTCAGGACTCATAACAGAGTAATTCATGGCCTCTGCACAATCAAAGACTCAAATCGTGCATTTCAGTTGTATCTTAGCGTGCAGACACGTGGTATTAGTATCACTGTTGATACTTTTGATTATTTATTCAAATGCTTCTGTAACAAAAGAGATCTACATAAAATTTCCAGAATTCTAGATGAGATGGTGAGTAATGGATGTTTTCCCGAGAGAGAAATGTGGACTACCATAGTTAATTGCTTTTGTGATCAAAGAGAAGCTTGTAATGCTGTGAAATTTCTGCAACTTGAGTTGATGAATTGA

Protein sequence

MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQKFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN
Homology
BLAST of Sed0000822 vs. NCBI nr
Match: KAG7019600.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 868.2 bits (2242), Expect = 3.2e-248
Identity = 413/472 (87.50%), Postives = 443/472 (93.86%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HVEQL++AERD NKALLIFDSATAEYTNGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFR AE LLDRMKEEKFDVTED+FLSICRAYGRVH+PLDSIRVFHKMQDFHCKPT+
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+VF ILVEENQLKLAFRFYRYMRK+GIPPTV S+NVLIKA CKNSGTMDKAM++FR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM + GCEPDSYTYGTLINGLCR GNIVEAKELLQEME KGCSPSV+TYTS+IHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEA+ LLEDMM KGIEPNVFTYS+LMDGFCK GHSLRAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVN LCDV RFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVIHGLCT+ DSNRAFQLYLSV TRGIS+TVDTFD L KCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL KISRILDEMV NGC PEREMW+T+VNCFCDQR+AC+A+K LQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of Sed0000822 vs. NCBI nr
Match: XP_023519166.1 (pentatricopeptide repeat-containing protein At5g46100 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 865.9 bits (2236), Expect = 1.6e-247
Identity = 412/472 (87.29%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HVEQLI+AERD NKALLIFDSATAEYTNGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFR AE LLDRMKEEKFDVTED+FLSICRAYGR+H+PLDSIRVFHKMQDFHCKPT+
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+VF ILVEENQL LAFRFYRYMRK+GIPPTV S+NVLIKA CKNSGTMDKAM++FR
Sbjct: 121 KSYISVFAILVEENQLNLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM + GCEPDSYTYGTLINGLCR GNIVEAKELLQEME KGCSPSV+TYTS+IHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEA+ LLEDMM KGIEPNVFTYS+LMDGFCK GHSLRAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVN LCDV RFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNCLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVIHGLCT+ DSNRAFQLYLSV TRGIS+TVDTFD L KCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL KISRILDEMV NGC PEREMW+T+VNCFCDQR+AC+A+K LQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of Sed0000822 vs. NCBI nr
Match: XP_023001715.1 (pentatricopeptide repeat-containing protein At5g46100 [Cucurbita maxima])

HSP 1 Score: 864.8 bits (2233), Expect = 3.5e-247
Identity = 411/472 (87.08%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HVEQLI+AERD NKALLIFDSATAEYTNGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFR AE LLDRMKEEK DVTED+FLSICRAYGR+H+PLDSIRVFHKMQDFHCKPT+
Sbjct: 61  VSANQFRLAETLLDRMKEEKLDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+VF ILVEENQLKLAFRFYRYMRK+GIPPTV S+NVLIKA CKNSGTMDKAM++FR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM + GCEPDSYTYGTLINGLCR GNIVEAKELLQEME KGCSPSVVTYTS+IHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVVTYTSMIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEA+ LLEDMM KGIEPNVFTYS+LMDGFCK GHSLRAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGK+NEALEILDRMKLQGLTPDAGLYGKIVN LCDV RFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKVNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVIHGLCT+ DSNRAFQLYLSV TRGIS+TVDTFD L KCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL K+SRILDEMV NGC PEREMW+T+VNCFCDQR+AC+A+K LQLELMN
Sbjct: 421 KRDLLKVSRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of Sed0000822 vs. NCBI nr
Match: XP_022927208.1 (pentatricopeptide repeat-containing protein At5g46100 [Cucurbita moschata])

HSP 1 Score: 864.0 bits (2231), Expect = 6.0e-247
Identity = 412/472 (87.29%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HVEQL++AERD NKALLIFDSATAEYTNGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFR AE LLDRMKEEKFDVTED+FLSICRAYGRVH+PLDSIRVFHKMQDFHCKPT+
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+VF ILVEENQLKLAFRFYRYMRK+GIPPTV S+NVLIKA CKNSGTMDKAM++FR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM + GCEPDSYTYGTLINGLCR GNIVEAKELLQEME KGCSPSV+TYTS+IHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEA+ LLEDMM KGIEPNVFTYS+LMDGFCK GHSLRAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVN LCDV RFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVIHGLCT+ DSNRAFQLYLSV TRGIS+TVDTFD L KCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL KISRILDEMV NGC PEREMW+T+VN FCDQR+AC+A+K LQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 472

BLAST of Sed0000822 vs. NCBI nr
Match: XP_022139832.1 (pentatricopeptide repeat-containing protein At5g46100 isoform X2 [Momordica charantia] >XP_022139834.1 pentatricopeptide repeat-containing protein At5g46100 isoform X2 [Momordica charantia])

HSP 1 Score: 860.1 bits (2221), Expect = 8.7e-246
Identity = 410/472 (86.86%), Postives = 438/472 (92.80%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TPSHVEQLI+AERD NKALLIFDSAT+EY NGFKHDLNTFRLMISKL
Sbjct: 1   MGSKAMFKWAKTVTPSHVEQLIQAERDINKALLIFDSATSEYANGFKHDLNTFRLMISKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFRSAE LLDRM EEKFDVTED+FL+ICRAYGRVH+PLDSIR+FHKM+DF CKPT+
Sbjct: 61  VSANQFRSAETLLDRMNEEKFDVTEDIFLTICRAYGRVHKPLDSIRIFHKMEDFQCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YITVF ILVEENQLKLA RFYRYMRKMG PPTV S+NVLIKAFCKNSGTMDKAMHI R
Sbjct: 121 KSYITVFAILVEENQLKLALRFYRYMRKMGFPPTVASLNVLIKAFCKNSGTMDKAMHILR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM +HGCEPDSYTYGTLINGLC+LG IVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN
Sbjct: 181 EMSNHGCEPDSYTYGTLINGLCKLGKIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEAV LLEDMMGKGIEPNVFTYS+LMDGFCK GHS RAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAVGLLEDMMGKGIEPNVFTYSSLMDGFCKAGHSSRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGL PDAGLYGKIVNGLCD SRFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLKPDAGLYGKIVNGLCDTSRFQEAANFLDEMVLG 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVI GLCTI DS+RAFQLYLSVQTRGISITVDTFD L KCFC 
Sbjct: 361 GITPNRVTWSLHVRTHNRVIDGLCTINDSSRAFQLYLSVQTRGISITVDTFDGLLKCFCK 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL K  RILDEMV NGC P+RE+W+T+VNCFCDQR+ C+A+K LQLELM+
Sbjct: 421 KRDLQKTYRILDEMVINGCIPQRELWSTVVNCFCDQRKTCDALKLLQLELMS 472

BLAST of Sed0000822 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 2.0e-168
Identity = 278/457 (60.83%), Postives = 355/457 (77.68%), Query Frame = 0

Query: 1   MSSKA-MFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISK 60
           M SK  MFKWSK ITPS V +L+RAE+D  K++ +FDSATAEY NG+ HD ++F  M+ +
Sbjct: 1   MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLR 60

Query: 61  LVSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPT 120
           LVSAN+F++AE L+ RMK E   V+ED+ LSICR YGRVH+P DS+RVFHKM+DF C P+
Sbjct: 61  LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120

Query: 121 QKFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIF 180
           QK Y+TV  ILVEENQL LAF+FY+ MR++G+PPTV S+NVLIKA C+N GT+D  + IF
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180

Query: 181 REMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQL 240
            EMP  GC+PDSYTYGTLI+GLCR G I EAK+L  EM  K C+P+VVTYTSLI+GLC  
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240

Query: 241 NNVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSY 300
            NVDEA+  LE+M  KGIEPNVFTYS+LMDG CK G SL+A  LFE M+ +  RPNMV+Y
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300

Query: 301 STLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVV 360
           +TLI GLCKE K+ EA+E+LDRM LQGL PDAGLYGK+++G C +S+F+EAANFLDEM++
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360

Query: 361 SGITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFC 420
            GITPNRLTW++HV+T N V+ GLC    S RAF LYLS+++RGIS+ V+T + L KC C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCANYPS-RAFTLYLSMRSRGISVEVETLESLVKCLC 420

Query: 421 NKRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQ 457
            K +  K  +++DE+V++GC P +  W  ++    D+
Sbjct: 421 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDK 456

BLAST of Sed0000822 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-62
Identity = 141/453 (31.13%), Postives = 233/453 (51.43%), Query Frame = 0

Query: 7   FKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQF 66
           F  S +++P+   +++    +   +  +F SA       FK   +T   MI    ++  F
Sbjct: 36  FSSSVSVSPNPSMEVVENPLEAPISEKMFKSAPK--MGSFKLGDSTLSSMIESYANSGDF 95

Query: 67  RSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQD-FHCKPTQKFYIT 126
            S E LL R++ E   + E  F+ + RAYG+ H P  ++ +FH+M D F CK + K + +
Sbjct: 96  DSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNS 155

Query: 127 VFDILVEENQLKLAFRFYRYM----RKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFRE 186
           V ++++ E        FY Y+      M I P   S N++IKA CK    +D+A+ +FR 
Sbjct: 156 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK-LRFVDRAIEVFRG 215

Query: 187 MPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNN 246
           MP+  C PD YTY TL++GLC+   I EA  LL EM+++GCSPS V Y  LI GLC+  +
Sbjct: 216 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 275

Query: 247 VDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYST 306
           +     L+++M  KG  PN  TY+ L+ G C  G   +A +L E+M+  +  PN V+Y T
Sbjct: 276 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 335

Query: 307 LINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSG 366
           LINGL K+ +  +A+ +L  M+ +G   +  +Y  +++GL    + +EA +   +M   G
Sbjct: 336 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 395

Query: 367 ITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNK 426
             PN + +S+       ++ GLC     N A ++   +   G      T+  L K F   
Sbjct: 396 CKPNIVVYSV-------LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 455

Query: 427 RDLHKISRILDEMVSNGCFPEREMWTTIVNCFC 455
               +  ++  EM   GC   +  ++ +++  C
Sbjct: 456 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

BLAST of Sed0000822 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-61
Identity = 141/442 (31.90%), Postives = 223/442 (50.45%), Query Frame = 0

Query: 27  DTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEALLDRMKEEKFDVTED 86
           D N   L+  S       G K D++TF ++I  L  A+Q R A  +L+ M        E 
Sbjct: 166 DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225

Query: 87  VFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQKFYITVFDILVEENQLKLAFRFYRYM 146
            F ++ + Y        ++R+  +M +F C  +      +     +E +++ A  F + M
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285

Query: 147 RKM-GIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDSYTYGTLINGLCRLG 206
               G  P   + N L+   CK +G +  A+ I   M   G +PD YTY ++I+GLC+LG
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 345

Query: 207 NIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLEDMMGKGIEPNVFTYS 266
            + EA E+L +M T+ CSP+ VTY +LI  LC+ N V+EA  L   +  KGI P+V T++
Sbjct: 346 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 405

Query: 267 ALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGKLNEALEILDRMKLQ 326
           +L+ G C   +   A  LFE+M  K   P+  +Y+ LI+ LC +GKL+EAL +L +M+L 
Sbjct: 406 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 465

Query: 327 GLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWSLHVRTHNRVIHGLCT 386
           G       Y  +++G C  ++ +EA    DEM V G++ N +       T+N +I GLC 
Sbjct: 466 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV-------TYNTLIDGLCK 525

Query: 387 IKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRILDEMVSNGCFPEREM 446
            +    A QL   +   G      T++ L   FC   D+ K + I+  M SNGC P+   
Sbjct: 526 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 585

Query: 447 WTTIVNCFCDQREACNAVKFLQ 468
           + T+++  C       A K L+
Sbjct: 586 YGTLISGLCKAGRVEVASKLLR 599

BLAST of Sed0000822 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-61
Identity = 135/443 (30.47%), Postives = 226/443 (51.02%), Query Frame = 0

Query: 13  ITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEAL 72
           + P HV  +I+ ++D  KAL +F+S   E   GFKH L+T+R +I KL    +F + E +
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEV--GFKHTLSTYRSVIEKLGYYGKFEAMEEV 64

Query: 73  LDRMKEEKFD-VTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQKFYITVFDILV 132
           L  M+E   + + E V++   + YGR  +  +++ VF +M  + C+PT   Y  +  +LV
Sbjct: 65  LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV 124

Query: 133 EENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDS 192
           +      A + Y  MR  GI P V S  + +K+FCK S     A+ +   M   GCE + 
Sbjct: 125 DSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS-RPHAALRLLNNMSSQGCEMNV 184

Query: 193 YTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLED 252
             Y T++ G        E  EL  +M   G S  + T+  L+  LC+  +V E   LL+ 
Sbjct: 185 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 244

Query: 253 MMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGK 312
           ++ +G+ PN+FTY+  + G C+ G    A  +   +I++  +P++++Y+ LI GLCK  K
Sbjct: 245 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 304

Query: 313 LNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWSL 372
             EA   L +M  +GL PD+  Y  ++ G C     Q A   + + V +G  P++     
Sbjct: 305 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF---- 364

Query: 373 HVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRIL 432
              T+  +I GLC   ++NRA  L+     +GI   V  ++ L K   N+  + + +++ 
Sbjct: 365 ---TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 424

Query: 433 DEMVSNGCFPEREMWTTIVNCFC 455
           +EM   G  PE + +  +VN  C
Sbjct: 425 NEMSEKGLIPEVQTFNILVNGLC 437

BLAST of Sed0000822 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.1e-61
Identity = 133/457 (29.10%), Postives = 239/457 (52.30%), Query Frame = 0

Query: 13  ITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEAL 72
           ITP  + +L+    + + ++ +F    ++  NG++H  + ++++I KL +  +F++ + L
Sbjct: 76  ITPFQLYKLLELPLNVSTSMELFSWTGSQ--NGYRHSFDVYQVLIGKLGANGEFKTIDRL 135

Query: 73  LDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQD-FHCKPTQKFYITVFDILV 132
           L +MK+E     E +F+SI R Y +   P  + R+  +M++ + C+PT K Y  V +ILV
Sbjct: 136 LIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 195

Query: 133 EENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDS 192
             N  K+A   +  M    IPPT+ +  V++KAFC     +D A+ + R+M  HGC P+S
Sbjct: 196 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA-VNEIDSALSLLRDMTKHGCVPNS 255

Query: 193 YTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLED 252
             Y TLI+ L +   + EA +LL+EM   GC P   T+  +I GLC+ + ++EA  ++  
Sbjct: 256 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 315

Query: 253 MMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGK 312
           M+ +G  P+  TY  LM+G CK+G    A++LF ++     +P +V ++TLI+G    G+
Sbjct: 316 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGR 375

Query: 313 LNEALEIL-DRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWS 372
           L++A  +L D +   G+ PD   Y  ++ G         A   L +M   G  PN     
Sbjct: 376 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN----- 435

Query: 373 LHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRI 432
             V ++  ++ G C +   + A+ +   +   G+      F+ L   FC +  + +   I
Sbjct: 436 --VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 495

Query: 433 LDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQ 468
             EM   GC P+   + ++++  C+  E  +A+  L+
Sbjct: 496 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

BLAST of Sed0000822 vs. ExPASy TrEMBL
Match: A0A6J1KLZ3 (pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita maxima OX=3661 GN=LOC111495767 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.7e-247
Identity = 411/472 (87.08%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HVEQLI+AERD NKALLIFDSATAEYTNGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFR AE LLDRMKEEK DVTED+FLSICRAYGR+H+PLDSIRVFHKMQDFHCKPT+
Sbjct: 61  VSANQFRLAETLLDRMKEEKLDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+VF ILVEENQLKLAFRFYRYMRK+GIPPTV S+NVLIKA CKNSGTMDKAM++FR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM + GCEPDSYTYGTLINGLCR GNIVEAKELLQEME KGCSPSVVTYTS+IHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVVTYTSMIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEA+ LLEDMM KGIEPNVFTYS+LMDGFCK GHSLRAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGK+NEALEILDRMKLQGLTPDAGLYGKIVN LCDV RFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKVNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVIHGLCT+ DSNRAFQLYLSV TRGIS+TVDTFD L KCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL K+SRILDEMV NGC PEREMW+T+VNCFCDQR+AC+A+K LQLELMN
Sbjct: 421 KRDLLKVSRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of Sed0000822 vs. ExPASy TrEMBL
Match: A0A6J1EKD3 (pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita moschata OX=3662 GN=LOC111434127 PE=4 SV=1)

HSP 1 Score: 864.0 bits (2231), Expect = 2.9e-247
Identity = 412/472 (87.29%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HVEQL++AERD NKALLIFDSATAEYTNGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFR AE LLDRMKEEKFDVTED+FLSICRAYGRVH+PLDSIRVFHKMQDFHCKPT+
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+VF ILVEENQLKLAFRFYRYMRK+GIPPTV S+NVLIKA CKNSGTMDKAM++FR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM + GCEPDSYTYGTLINGLCR GNIVEAKELLQEME KGCSPSV+TYTS+IHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEA+ LLEDMM KGIEPNVFTYS+LMDGFCK GHSLRAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVN LCDV RFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVIHGLCT+ DSNRAFQLYLSV TRGIS+TVDTFD L KCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL KISRILDEMV NGC PEREMW+T+VN FCDQR+AC+A+K LQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 472

BLAST of Sed0000822 vs. ExPASy TrEMBL
Match: A0A6J1CDW1 (pentatricopeptide repeat-containing protein At5g46100 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010648 PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 4.2e-246
Identity = 410/472 (86.86%), Postives = 438/472 (92.80%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TPSHVEQLI+AERD NKALLIFDSAT+EY NGFKHDLNTFRLMISKL
Sbjct: 20  MGSKAMFKWAKTVTPSHVEQLIQAERDINKALLIFDSATSEYANGFKHDLNTFRLMISKL 79

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFRSAE LLDRM EEKFDVTED+FL+ICRAYGRVH+PLDSIR+FHKM+DF CKPT+
Sbjct: 80  VSANQFRSAETLLDRMNEEKFDVTEDIFLTICRAYGRVHKPLDSIRIFHKMEDFQCKPTE 139

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YITVF ILVEENQLKLA RFYRYMRKMG PPTV S+NVLIKAFCKNSGTMDKAMHI R
Sbjct: 140 KSYITVFAILVEENQLKLALRFYRYMRKMGFPPTVASLNVLIKAFCKNSGTMDKAMHILR 199

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM +HGCEPDSYTYGTLINGLC+LG IVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN
Sbjct: 200 EMSNHGCEPDSYTYGTLINGLCKLGKIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 259

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEAV LLEDMMGKGIEPNVFTYS+LMDGFCK GHS RAR+L E M+QKRLRPNM+SYS
Sbjct: 260 NVDEAVGLLEDMMGKGIEPNVFTYSSLMDGFCKAGHSSRARDLLELMVQKRLRPNMISYS 319

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGL PDAGLYGKIVNGLCD SRFQEAANFLDEMV+ 
Sbjct: 320 TLINGLCKEGKLNEALEILDRMKLQGLKPDAGLYGKIVNGLCDTSRFQEAANFLDEMVLG 379

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVI GLCTI DS+RAFQLYLSVQTRGISITVDTFD L KCFC 
Sbjct: 380 GITPNRVTWSLHVRTHNRVIDGLCTINDSSRAFQLYLSVQTRGISITVDTFDGLLKCFCK 439

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL K  RILDEMV NGC P+RE+W+T+VNCFCDQR+ C+A+K LQLELM+
Sbjct: 440 KRDLQKTYRILDEMVINGCIPQRELWSTVVNCFCDQRKTCDALKLLQLELMS 491

BLAST of Sed0000822 vs. ExPASy TrEMBL
Match: A0A6J1CF14 (pentatricopeptide repeat-containing protein At5g46100 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010648 PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 4.2e-246
Identity = 410/472 (86.86%), Postives = 438/472 (92.80%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TPSHVEQLI+AERD NKALLIFDSAT+EY NGFKHDLNTFRLMISKL
Sbjct: 1   MGSKAMFKWAKTVTPSHVEQLIQAERDINKALLIFDSATSEYANGFKHDLNTFRLMISKL 60

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           VSANQFRSAE LLDRM EEKFDVTED+FL+ICRAYGRVH+PLDSIR+FHKM+DF CKPT+
Sbjct: 61  VSANQFRSAETLLDRMNEEKFDVTEDIFLTICRAYGRVHKPLDSIRIFHKMEDFQCKPTE 120

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YITVF ILVEENQLKLA RFYRYMRKMG PPTV S+NVLIKAFCKNSGTMDKAMHI R
Sbjct: 121 KSYITVFAILVEENQLKLALRFYRYMRKMGFPPTVASLNVLIKAFCKNSGTMDKAMHILR 180

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
           EM +HGCEPDSYTYGTLINGLC+LG IVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN
Sbjct: 181 EMSNHGCEPDSYTYGTLINGLCKLGKIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEAV LLEDMMGKGIEPNVFTYS+LMDGFCK GHS RAR+L E M+QKRLRPNM+SYS
Sbjct: 241 NVDEAVGLLEDMMGKGIEPNVFTYSSLMDGFCKAGHSSRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TLINGLCKEGKLNEALEILDRMKLQGL PDAGLYGKIVNGLCD SRFQEAANFLDEMV+ 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLKPDAGLYGKIVNGLCDTSRFQEAANFLDEMVLG 360

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GITPNR+TWSLHVRTHNRVI GLCTI DS+RAFQLYLSVQTRGISITVDTFD L KCFC 
Sbjct: 361 GITPNRVTWSLHVRTHNRVIDGLCTINDSSRAFQLYLSVQTRGISITVDTFDGLLKCFCK 420

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL K  RILDEMV NGC P+RE+W+T+VNCFCDQR+ C+A+K LQLELM+
Sbjct: 421 KRDLQKTYRILDEMVINGCIPQRELWSTVVNCFCDQRKTCDALKLLQLELMS 472

BLAST of Sed0000822 vs. ExPASy TrEMBL
Match: A0A5D3DS89 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G001080 PE=4 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 7.9e-237
Identity = 394/472 (83.47%), Postives = 430/472 (91.10%), Query Frame = 0

Query: 1   MSSKAMFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKL 60
           M SKAMFKW+KT+TP+HV+QLI+AERD  KAL+IFDSATAEY NGFKHD+NTF LMISKL
Sbjct: 20  MGSKAMFKWAKTVTPAHVQQLIQAERDIKKALIIFDSATAEYANGFKHDINTFSLMISKL 79

Query: 61  VSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQ 120
           +SANQFR AEALLDRMKEEK DVTED+ LSICRAYGR+H+PLDSIRVFHKM DFHCKPT+
Sbjct: 80  ISANQFRLAEALLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMPDFHCKPTE 139

Query: 121 KFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFR 180
           K YI+V  ILVEENQLKLAFRFYR MRKMGIPPTVTS+NVLIKAFCKNSGTMDKAMH+FR
Sbjct: 140 KSYISVLAILVEENQLKLAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFR 199

Query: 181 EMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240
            M +HG EPDSYTYGTLINGLCR GNIVEAKELLQEMETKGCSPSV+TYTS+IHGLCQLN
Sbjct: 200 TMSNHGFEPDSYTYGTLINGLCRFGNIVEAKELLQEMETKGCSPSVITYTSIIHGLCQLN 259

Query: 241 NVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYS 300
           NVDEAV LLEDM  K IEPNVFTYS+LMDGFCK GHS RAR++   M+QKRLRPNM+SYS
Sbjct: 260 NVDEAVRLLEDMKDKNIEPNVFTYSSLMDGFCKAGHSSRARDILGLMVQKRLRPNMISYS 319

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVS 360
           TL+NGLC EGK+NEALEI DRMKLQGL PDAGLYGKIVN LCDVSRFQEAANFLDEMV+ 
Sbjct: 320 TLLNGLCNEGKINEALEIFDRMKLQGLKPDAGLYGKIVNRLCDVSRFQEAANFLDEMVLC 379

Query: 361 GITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCN 420
           GI PNRLTWSLHVRTHNRVIHGLCTI DSNRAFQLYLSV TRGISITVDTF+ L KCFCN
Sbjct: 380 GIKPNRLTWSLHVRTHNRVIHGLCTINDSNRAFQLYLSVLTRGISITVDTFNSLLKCFCN 439

Query: 421 KRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQLELMN 473
           KRDL K SRILDEMV NGC P+ EMW+T+VNCFCD+R+AC+A+K LQL+LM+
Sbjct: 440 KRDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQLQLMD 491

BLAST of Sed0000822 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 593.6 bits (1529), Expect = 1.4e-169
Identity = 278/457 (60.83%), Postives = 355/457 (77.68%), Query Frame = 0

Query: 1   MSSKA-MFKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISK 60
           M SK  MFKWSK ITPS V +L+RAE+D  K++ +FDSATAEY NG+ HD ++F  M+ +
Sbjct: 1   MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLR 60

Query: 61  LVSANQFRSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPT 120
           LVSAN+F++AE L+ RMK E   V+ED+ LSICR YGRVH+P DS+RVFHKM+DF C P+
Sbjct: 61  LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120

Query: 121 QKFYITVFDILVEENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIF 180
           QK Y+TV  ILVEENQL LAF+FY+ MR++G+PPTV S+NVLIKA C+N GT+D  + IF
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180

Query: 181 REMPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQL 240
            EMP  GC+PDSYTYGTLI+GLCR G I EAK+L  EM  K C+P+VVTYTSLI+GLC  
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240

Query: 241 NNVDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSY 300
            NVDEA+  LE+M  KGIEPNVFTYS+LMDG CK G SL+A  LFE M+ +  RPNMV+Y
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300

Query: 301 STLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVV 360
           +TLI GLCKE K+ EA+E+LDRM LQGL PDAGLYGK+++G C +S+F+EAANFLDEM++
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360

Query: 361 SGITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFC 420
            GITPNRLTW++HV+T N V+ GLC    S RAF LYLS+++RGIS+ V+T + L KC C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCANYPS-RAFTLYLSMRSRGISVEVETLESLVKCLC 420

Query: 421 NKRDLHKISRILDEMVSNGCFPEREMWTTIVNCFCDQ 457
            K +  K  +++DE+V++GC P +  W  ++    D+
Sbjct: 421 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDK 456

BLAST of Sed0000822 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-63
Identity = 141/453 (31.13%), Postives = 233/453 (51.43%), Query Frame = 0

Query: 7   FKWSKTITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQF 66
           F  S +++P+   +++    +   +  +F SA       FK   +T   MI    ++  F
Sbjct: 36  FSSSVSVSPNPSMEVVENPLEAPISEKMFKSAPK--MGSFKLGDSTLSSMIESYANSGDF 95

Query: 67  RSAEALLDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQD-FHCKPTQKFYIT 126
            S E LL R++ E   + E  F+ + RAYG+ H P  ++ +FH+M D F CK + K + +
Sbjct: 96  DSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNS 155

Query: 127 VFDILVEENQLKLAFRFYRYM----RKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFRE 186
           V ++++ E        FY Y+      M I P   S N++IKA CK    +D+A+ +FR 
Sbjct: 156 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK-LRFVDRAIEVFRG 215

Query: 187 MPDHGCEPDSYTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNN 246
           MP+  C PD YTY TL++GLC+   I EA  LL EM+++GCSPS V Y  LI GLC+  +
Sbjct: 216 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 275

Query: 247 VDEAVILLEDMMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYST 306
           +     L+++M  KG  PN  TY+ L+ G C  G   +A +L E+M+  +  PN V+Y T
Sbjct: 276 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 335

Query: 307 LINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSG 366
           LINGL K+ +  +A+ +L  M+ +G   +  +Y  +++GL    + +EA +   +M   G
Sbjct: 336 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 395

Query: 367 ITPNRLTWSLHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNK 426
             PN + +S+       ++ GLC     N A ++   +   G      T+  L K F   
Sbjct: 396 CKPNIVVYSV-------LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 455

Query: 427 RDLHKISRILDEMVSNGCFPEREMWTTIVNCFC 455
               +  ++  EM   GC   +  ++ +++  C
Sbjct: 456 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

BLAST of Sed0000822 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 8.8e-63
Identity = 141/442 (31.90%), Postives = 223/442 (50.45%), Query Frame = 0

Query: 27  DTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEALLDRMKEEKFDVTED 86
           D N   L+  S       G K D++TF ++I  L  A+Q R A  +L+ M        E 
Sbjct: 166 DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225

Query: 87  VFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQKFYITVFDILVEENQLKLAFRFYRYM 146
            F ++ + Y        ++R+  +M +F C  +      +     +E +++ A  F + M
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285

Query: 147 RKM-GIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDSYTYGTLINGLCRLG 206
               G  P   + N L+   CK +G +  A+ I   M   G +PD YTY ++I+GLC+LG
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 345

Query: 207 NIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLEDMMGKGIEPNVFTYS 266
            + EA E+L +M T+ CSP+ VTY +LI  LC+ N V+EA  L   +  KGI P+V T++
Sbjct: 346 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 405

Query: 267 ALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGKLNEALEILDRMKLQ 326
           +L+ G C   +   A  LFE+M  K   P+  +Y+ LI+ LC +GKL+EAL +L +M+L 
Sbjct: 406 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 465

Query: 327 GLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWSLHVRTHNRVIHGLCT 386
           G       Y  +++G C  ++ +EA    DEM V G++ N +       T+N +I GLC 
Sbjct: 466 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV-------TYNTLIDGLCK 525

Query: 387 IKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRILDEMVSNGCFPEREM 446
            +    A QL   +   G      T++ L   FC   D+ K + I+  M SNGC P+   
Sbjct: 526 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 585

Query: 447 WTTIVNCFCDQREACNAVKFLQ 468
           + T+++  C       A K L+
Sbjct: 586 YGTLISGLCKAGRVEVASKLLR 599

BLAST of Sed0000822 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-62
Identity = 135/443 (30.47%), Postives = 226/443 (51.02%), Query Frame = 0

Query: 13  ITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEAL 72
           + P HV  +I+ ++D  KAL +F+S   E   GFKH L+T+R +I KL    +F + E +
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEV--GFKHTLSTYRSVIEKLGYYGKFEAMEEV 64

Query: 73  LDRMKEEKFD-VTEDVFLSICRAYGRVHQPLDSIRVFHKMQDFHCKPTQKFYITVFDILV 132
           L  M+E   + + E V++   + YGR  +  +++ VF +M  + C+PT   Y  +  +LV
Sbjct: 65  LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV 124

Query: 133 EENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDS 192
           +      A + Y  MR  GI P V S  + +K+FCK S     A+ +   M   GCE + 
Sbjct: 125 DSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS-RPHAALRLLNNMSSQGCEMNV 184

Query: 193 YTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLED 252
             Y T++ G        E  EL  +M   G S  + T+  L+  LC+  +V E   LL+ 
Sbjct: 185 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 244

Query: 253 MMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGK 312
           ++ +G+ PN+FTY+  + G C+ G    A  +   +I++  +P++++Y+ LI GLCK  K
Sbjct: 245 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 304

Query: 313 LNEALEILDRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWSL 372
             EA   L +M  +GL PD+  Y  ++ G C     Q A   + + V +G  P++     
Sbjct: 305 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF---- 364

Query: 373 HVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRIL 432
              T+  +I GLC   ++NRA  L+     +GI   V  ++ L K   N+  + + +++ 
Sbjct: 365 ---TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 424

Query: 433 DEMVSNGCFPEREMWTTIVNCFC 455
           +EM   G  PE + +  +VN  C
Sbjct: 425 NEMSEKGLIPEVQTFNILVNGLC 437

BLAST of Sed0000822 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 5.7e-62
Identity = 133/457 (29.10%), Postives = 239/457 (52.30%), Query Frame = 0

Query: 13  ITPSHVEQLIRAERDTNKALLIFDSATAEYTNGFKHDLNTFRLMISKLVSANQFRSAEAL 72
           ITP  + +L+    + + ++ +F    ++  NG++H  + ++++I KL +  +F++ + L
Sbjct: 76  ITPFQLYKLLELPLNVSTSMELFSWTGSQ--NGYRHSFDVYQVLIGKLGANGEFKTIDRL 135

Query: 73  LDRMKEEKFDVTEDVFLSICRAYGRVHQPLDSIRVFHKMQD-FHCKPTQKFYITVFDILV 132
           L +MK+E     E +F+SI R Y +   P  + R+  +M++ + C+PT K Y  V +ILV
Sbjct: 136 LIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 195

Query: 133 EENQLKLAFRFYRYMRKMGIPPTVTSVNVLIKAFCKNSGTMDKAMHIFREMPDHGCEPDS 192
             N  K+A   +  M    IPPT+ +  V++KAFC     +D A+ + R+M  HGC P+S
Sbjct: 196 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA-VNEIDSALSLLRDMTKHGCVPNS 255

Query: 193 YTYGTLINGLCRLGNIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLNNVDEAVILLED 252
             Y TLI+ L +   + EA +LL+EM   GC P   T+  +I GLC+ + ++EA  ++  
Sbjct: 256 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 315

Query: 253 MMGKGIEPNVFTYSALMDGFCKVGHSLRARNLFEQMIQKRLRPNMVSYSTLINGLCKEGK 312
           M+ +G  P+  TY  LM+G CK+G    A++LF ++     +P +V ++TLI+G    G+
Sbjct: 316 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGR 375

Query: 313 LNEALEIL-DRMKLQGLTPDAGLYGKIVNGLCDVSRFQEAANFLDEMVVSGITPNRLTWS 372
           L++A  +L D +   G+ PD   Y  ++ G         A   L +M   G  PN     
Sbjct: 376 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN----- 435

Query: 373 LHVRTHNRVIHGLCTIKDSNRAFQLYLSVQTRGISITVDTFDYLFKCFCNKRDLHKISRI 432
             V ++  ++ G C +   + A+ +   +   G+      F+ L   FC +  + +   I
Sbjct: 436 --VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 495

Query: 433 LDEMVSNGCFPEREMWTTIVNCFCDQREACNAVKFLQ 468
             EM   GC P+   + ++++  C+  E  +A+  L+
Sbjct: 496 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7019600.13.2e-24887.50Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023519166.11.6e-24787.29pentatricopeptide repeat-containing protein At5g46100 [Cucurbita pepo subsp. pep... [more]
XP_023001715.13.5e-24787.08pentatricopeptide repeat-containing protein At5g46100 [Cucurbita maxima][more]
XP_022927208.16.0e-24787.29pentatricopeptide repeat-containing protein At5g46100 [Cucurbita moschata][more]
XP_022139832.18.7e-24686.86pentatricopeptide repeat-containing protein At5g46100 isoform X2 [Momordica char... [more]
Match NameE-valueIdentityDescription
Q9FNL22.0e-16860.83Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... [more]
O494362.5e-6231.13Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9LFF11.2e-6131.90Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9CA582.1e-6130.47Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
Q9FMF68.1e-6129.10Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1KLZ31.7e-24787.08pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita maxima OX=366... [more]
A0A6J1EKD32.9e-24787.29pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita moschata OX=3... [more]
A0A6J1CDW14.2e-24686.86pentatricopeptide repeat-containing protein At5g46100 isoform X1 OS=Momordica ch... [more]
A0A6J1CF144.2e-24686.86pentatricopeptide repeat-containing protein At5g46100 isoform X2 OS=Momordica ch... [more]
A0A5D3DS897.9e-23783.47Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT5G46100.11.4e-16960.83Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.11.8e-6331.13Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.18.8e-6331.90Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74580.11.5e-6230.47Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.15.7e-6229.10Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 291..323
e-value: 8.5E-14
score: 51.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 373..420
e-value: 2.2E-7
score: 31.0
coord: 224..273
e-value: 4.2E-18
score: 65.3
coord: 159..203
e-value: 7.5E-15
score: 54.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 335..362
e-value: 0.38
score: 11.1
coord: 52..80
e-value: 0.024
score: 14.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 227..261
e-value: 8.9E-9
score: 33.0
coord: 123..155
e-value: 0.0029
score: 15.7
coord: 192..226
e-value: 3.4E-11
score: 40.6
coord: 158..191
e-value: 6.5E-6
score: 24.0
coord: 334..365
e-value: 1.1E-4
score: 20.1
coord: 262..295
e-value: 4.9E-7
score: 27.5
coord: 410..441
e-value: 5.0E-5
score: 21.2
coord: 297..331
e-value: 1.1E-10
score: 39.0
coord: 52..83
e-value: 0.0014
score: 16.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..294
score: 12.375365
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 190..224
score: 13.953793
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 225..259
score: 12.868624
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 330..364
score: 10.424253
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 49..83
score: 8.780059
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 13.844179
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 9.722731
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 119..153
score: 8.681407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..189
score: 12.298636
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 134..278
e-value: 5.9E-48
score: 165.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 279..373
e-value: 3.2E-27
score: 97.1
coord: 374..470
e-value: 3.2E-15
score: 57.9
coord: 4..133
e-value: 1.3E-16
score: 62.4
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 3..471
NoneNo IPR availablePANTHERPTHR47933:SF25EMP16coord: 3..471
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 132..337

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000822.1Sed0000822.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding