Sed0000799 (gene) Chayote v1

Overview


Name	Sed0000799
Type	gene
Organism	Sechium edule (Chayote v1)
Description	BPTI/Kunitz domain-containing protein 2-like isoform X2
Location	LG05: 7764975 .. 7766205 (+)
RNA-Seq Expression	Sed0000799
Synteny	Sed0000799

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCCAAAGCTGTGTTTGCGTGTTTGTTGTTTGTCTCTGTTGTCGTTCTTGCTGCGGCAGTGTCGGAAGGAAATCAACAGCAGCATGCCAATGCTGAGGGTAATGTATTGAATTTATTATTAGACTGATAATTATTTTTTAAAAAAAATTAATGTGTTAAAATAAAAATACTCTTTAACACTTAAAAGTAAATCCTAAACCGGTTACGTTTGACTCTAACAATTCTTTCTTTACCGAATGGGTTAGTGACGCAATAGTTTCATTGTTTGGTTGTAAACCAGTTCAACACCATCGTCATAGGTTCGACCTCGAGAATCGGTATTTGTCTCCCCTCCCCTAATATGTACTAAAAAAAACAATTCCTTCTTTTTTTTTCTCTTACTATTAATTTGTATGAATCTAACTAATATATCGGGGGTTTTTCCTATATAATAATAAAATAAGGAAAAGTATTTCTATTTATAGTACAAAATTAAAATTAATTCATTTATAATAAGAAATTTAAATAAAATTCAATCACCAATAAAATTCAATAAAATGATAGAGTTTTATCATCAGTTAGTTCTATAACTGATAGAATTTAATCAGTAATAGACTCACTTTATCACTTGTTGAGTTCTATAAAAATTGTGTCTCAAATATAATAAAAGAGATAGAATGTGGTGCTAAGAATTTGTGGTGCTAAGGATAAATTTCATAGTATATTTCTTTAACATATTCCTTTTAACATTTTTAATGATAAAATAAATTTTCTCAAAAAAAAAAAGTAATTATTACTAAACAATCTCTCAAAACAAGAATGAGTTCAATTAGATGAATTCAACTAGAATTATGTATAACCTAGTAACCATACCTTCAAATTTCTGCCCTATTTTTTTTCAATTAAAAAAAAATTGTAAAAAGTCTTCATACTTTGTGAATTGGAACACATTGTTAGAATAATTATCCATAATTTATGCATGCATGAATATGTATCTTTCATGAACAAAAAATTACACAGTTGAAAAGGCAAATCCAGTAGAAGAATCAAAGCAGCGGTGCAGCCATGGATGCTGCCGCTTCATAGGACATCGCTGCGTGAAATGCTGTGGGAGTCTTGCAGAAGCACAAGCTAATGAGAATGCACAACACGAGTACGAGGTCGAAAAAGCACGGAAGGGCGGCGGCCACGGTGGATGGAATGGCCGCGGCAGCGGCCATGGAGGAAAGGGTGGTGGAGGAAAATGA

mRNA sequence

ATGAAGTCCAAAGCTGTGTTTGCGTGTTTGTTGTTTGTCTCTGTTGTCGTTCTTGCTGCGGCAGTGTCGGAAGGAAATCAACAGCAGCATGCCAATGCTGAGGGACATCGCTGCGTGAAATGCTGTGGGAGTCTTGCAGAAGCACAAGCTAATGAGAATGCACAACACGAGTACGAGGTCGAAAAAGCACGGAAGGGCGGCGGCCACGGTGGATGGAATGGCCGCGGCAGCGGCCATGGAGGAAAGGGTGGTGGAGGAAAATGA

Coding sequence (CDS)

ATGAAGTCCAAAGCTGTGTTTGCGTGTTTGTTGTTTGTCTCTGTTGTCGTTCTTGCTGCGGCAGTGTCGGAAGGAAATCAACAGCAGCATGCCAATGCTGAGGGACATCGCTGCGTGAAATGCTGTGGGAGTCTTGCAGAAGCACAAGCTAATGAGAATGCACAACACGAGTACGAGGTCGAAAAAGCACGGAAGGGCGGCGGCCACGGTGGATGGAATGGCCGCGGCAGCGGCCATGGAGGAAAGGGTGGTGGAGGAAAATGA

Protein sequence

MKSKAVFACLLFVSVVVLAAAVSEGNQQQHANAEGHRCVKCCGSLAEAQANENAQHEYEVEKARKGGGHGGWNGRGSGHGGKGGGGK

Homology

[Close]

BLAST of Sed0000799 vs. NCBI nr
Match: XP_022986401.1 (CYC02 protein-like [Cucurbita maxima])

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-08
Identity = 60/120 (50.00%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 1   MKSKA-VFACL---LFVSVVVLAAAVSEGNQQQHANAE---------------------- 60
           MKSKA V ACL   L VS+ V A+AVSEG+QQQ   AE                      
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GHRCVKCCGSLAEAQANENA-------QHEYEVE-KARKGGGHGGWNGRGSGHGGKGGGG 87
           G+RCVKCCGS AEAQAN NA       Q   EVE  A + GGHGGW G G   GG+GGGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120

[Close]

BLAST of Sed0000799 vs. NCBI nr
Match: XP_023513181.1 (cold and drought-regulated protein CORA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-07
Identity = 61/120 (50.83%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 1   MKSKA-VFACL---LFVSVVVLAAAVSEGNQQQHANAE---------------------- 60
           MKSKA V ACL   L VS+ V A+AVSEG+QQQ   AE                      
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GHRCVKCCGSLAEAQANENA-------QHEYEVE-KARKGGGHGGWNGRGSGHGGKGGGG 87
           G+RCVKCCGS AEAQAN NA       Q   EVE  A + GGHGGW G G GHGG  GGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRG-GGGHGGGHGGG 119

[Close]

BLAST of Sed0000799 vs. NCBI nr
Match: XP_022944320.1 (CYC02 protein-like [Cucurbita moschata])

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-07
Identity = 60/120 (50.00%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 1   MKSKA-VFACL---LFVSVVVLAAAVSEGNQQQHANAE---------------------- 60
           MKSKA V ACL   L VS+ V A+A SEG+QQQ   AE                      
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAASEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GHRCVKCCGSLAEAQANENA-------QHEYEVE-KARKGGGHGGWNGRGSGHGGKGGGG 87
           G+RCVKCCGS AEAQAN NA       Q   EVE  A + GGHGGW G G GHGG  GGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRG-GGGHGGGWGGG 119

[Close]

BLAST of Sed0000799 vs. NCBI nr
Match: KAG6570923.1 (hypothetical protein SDJN03_29838, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06
Identity = 62/124 (50.00%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 1   MKSKA-VFACL---LFVSVVVLAAAVSEGNQQQHANAE---------------------- 60
           MKSKA V ACL   L VS+ V A+AVSEG+QQQ   AE                      
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GHRCVKCCGSLAEAQANENA-------QHEYEVE-KARKGGGHGGW---NGRGSGH-GGK 87
           G+RCVKCCGS AEAQAN NA       Q   EVE  A + GGHGGW    G G GH GG 
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRGGGGHGGGHRGGW 120

[Close]

BLAST of Sed0000799 vs. NCBI nr
Match: XP_008455979.1 (PREDICTED: BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo] >TYK02908.1 BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.5e-05
Identity = 55/123 (44.72%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 1   MKSKA-VFACLLFVSVVVLAAAVSEGNQQQHANAE-----------------------GH 60
           M SKA VFACLL +   V+A A +EGNQ+Q  +A+                       GH
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIA-AEGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRYYGH 60

Query: 61  RCVKCCGSLAEAQ-----ANENAQHEYEVEKARKG-GGHGGWNG------RGSGHGGKGG 88
            CV+CCGSLAEAQ     AN  A+ E EVE   +G GGHGGW G       G G GG+GG
Sbjct: 61  DCVRCCGSLAEAQDAAAAANAAAEEENEVEVTPQGWGGHGGWGGGGRSGWGGGGRGGRGG 120

[Close]

BLAST of Sed0000799 vs. ExPASy TrEMBL
Match: A0A6J1JB01 (CYC02 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484148 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-08
Identity = 60/120 (50.00%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 1   MKSKA-VFACL---LFVSVVVLAAAVSEGNQQQHANAE---------------------- 60
           MKSKA V ACL   L VS+ V A+AVSEG+QQQ   AE                      
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GHRCVKCCGSLAEAQANENA-------QHEYEVE-KARKGGGHGGWNGRGSGHGGKGGGG 87
           G+RCVKCCGS AEAQAN NA       Q   EVE  A + GGHGGW G G   GG+GGGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120

[Close]

BLAST of Sed0000799 vs. ExPASy TrEMBL
Match: A0A6J1FYL2 (CYC02 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448800 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 60/120 (50.00%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 1   MKSKA-VFACL---LFVSVVVLAAAVSEGNQQQHANAE---------------------- 60
           MKSKA V ACL   L VS+ V A+A SEG+QQQ   AE                      
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAASEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GHRCVKCCGSLAEAQANENA-------QHEYEVE-KARKGGGHGGWNGRGSGHGGKGGGG 87
           G+RCVKCCGS AEAQAN NA       Q   EVE  A + GGHGGW G G GHGG  GGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRG-GGGHGGGWGGG 119

[Close]

BLAST of Sed0000799 vs. ExPASy TrEMBL
Match: A0A5D3BV93 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00080 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 55/123 (44.72%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 1   MKSKA-VFACLLFVSVVVLAAAVSEGNQQQHANAE-----------------------GH 60
           M SKA VFACLL +   V+A A +EGNQ+Q  +A+                       GH
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIA-AEGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRYYGH 60

Query: 61  RCVKCCGSLAEAQ-----ANENAQHEYEVEKARKG-GGHGGWNG------RGSGHGGKGG 88
            CV+CCGSLAEAQ     AN  A+ E EVE   +G GGHGGW G       G G GG+GG
Sbjct: 61  DCVRCCGSLAEAQDAAAAANAAAEEENEVEVTPQGWGGHGGWGGGGRSGWGGGGRGGRGG 120

[Close]

BLAST of Sed0000799 vs. ExPASy TrEMBL
Match: A0A1S3C295 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 55/123 (44.72%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 1   MKSKA-VFACLLFVSVVVLAAAVSEGNQQQHANAE-----------------------GH 60
           M SKA VFACLL +   V+A A +EGNQ+Q  +A+                       GH
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIA-AEGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRYYGH 60

Query: 61  RCVKCCGSLAEAQ-----ANENAQHEYEVEKARKG-GGHGGWNG------RGSGHGGKGG 88
            CV+CCGSLAEAQ     AN  A+ E EVE   +G GGHGGW G       G G GG+GG
Sbjct: 61  DCVRCCGSLAEAQDAAAAANAAAEEENEVEVTPQGWGGHGGWGGGGRSGWGGGGRGGRGG 120

[Close]

BLAST of Sed0000799 vs. ExPASy TrEMBL
Match: A0A5A7UI77 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00550 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 54/117 (46.15%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 1   MKSKA-VFACLLFVSVVVLAAAVSEGNQQQHANAE-----------------------GH 60
           M SKA VFACLL +   V+A A +EGNQ+Q  +A+                       GH
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIA-AEGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRYYGH 60

Query: 61  RCVKCCGSLAEAQ-----ANENAQHEYEVEKARKG-GGHGGWNGRGSGHGGKGGGGK 88
            CV+CCGSLAEAQ     AN  A+ E EVE   +G GGHGGW   G G GG GGGG+
Sbjct: 61  DCVRCCGSLAEAQDAAAAANAAAEEENEVEVTPQGWGGHGGWG--GGGRGGWGGGGR 114

The following BLAST results are available for this feature:

BLAST of Sed0000799 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986401.1	4.1e-08	50.00	CYC02 protein-like [Cucurbita maxima]	[more]
XP_023513181.1	2.0e-07	50.83	cold and drought-regulated protein CORA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944320.1	5.9e-07	50.00	CYC02 protein-like [Cucurbita moschata]	[more]
KAG6570923.1	1.3e-06	50.00	hypothetical protein SDJN03_29838, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008455979.1	2.5e-05	44.72	PREDICTED: BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo...	[more]

BLAST of Sed0000799 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0000799 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JB01	2.0e-08	50.00	CYC02 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484148 PE=4 SV=1	[more]
A0A6J1FYL2	2.9e-07	50.00	CYC02 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448800 PE=4 SV=1	[more]
A0A5D3BV93	1.2e-05	44.72	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. mak...	[more]
A0A1S3C295	1.2e-05	44.72	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7UI77	2.0e-05	46.15	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. mak...	[more]

BLAST of Sed0000799 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000799.1	Sed0000799.1	mRNA