Sed0000594 (gene) Chayote v1

Overview


Name	Sed0000594
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Histone deacetylase
Location	LG12: 30904617 .. 30918088 (+)
RNA-Seq Expression	Sed0000594
Synteny	Sed0000594

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATTCCAATGCAGAAAAAAAAAGGAATAAAGGAAAAAAGTTGACCCAACAGTTAGAGTGCGCTGACTCGCGCGTGCACTTGATTTGGCAGTGACGATCGCTCTGTAATCTCCGGCGATTGATCCGATACCGAAAAGTTTTCATCAGCCGAAGAATTTCTTCGCCGGAAAAATGGACGGTGATGGCGCAGAAATCAGGAAATTCGACGGAGAAACGGGCAATTCACGGAGGGTTGGGGTTTTGTACGACGAGAGAATGTGCAAGCACCACAAGCCTGACGGAGATTACCATCCCGAGAATCCTAGTCGAATTAGGGTGATTTGGAACAAGCTACAGACCGCTAGAATTCCTCAGAGGTATCTTCGTTTTTGTTGTTTCATTCGCATTTTGTATGTTGTGTGATTGATTTATGATTTGTGATGTGTTTTGATGGTAGTAAGAAAGGAAACGATGAAGAATTAGGTTAGATTCTGCTAACATGTAGTTCTGCTATCTGAAATGGGCGATTGTATAGCCACTGGTTACCGACTATGTTGCTCTACGATTACTCGGTGGAGTCTAACATTTTGCATGAGAGTTTACCCTATAAAATATAAATTCCATTAAAATCATTTTTATTTGACATGTAAGTCTCGAACCCAGGACCATCAAGCGGGCATACTTTTGAAGTCCAAGTTTTCAATCACCGCGCCACTCCTTGGGGACAATTTCTTTTAAAATCCTTGCCCCGTTTGTCAAGCTTTTTGTATTTTTATCTCCTAACTAAAATGGTATGTCCTATGGGCTGTGGACGTAGCTAACAAAACCTTAGAGGGTGTTTGAACGAGTAGTTGCATGAGGAGTTATTTTGAGTGATTAGAATGAGGAGTTATTTTGAGTGATTACAAATTGGATTGTAGTAATAGCTCGTTTGAATGTGCGTTTTTGCAGAGTAATTGCAAGTATCGTTTGGATGTGGATTTTTGTAGTGGAGTTGCATGTAATAGCTTATTTGGATGTGAATTTTTGTAGAGGAGTTGCAAGTAATAATTTATTTGGATGTGAATTTTTGTAGAAGAGTTGCAGATAATAGCTCTTTTGGATGTGGATTTTTGTAGAAGATTTGCTGTCAATAGCTCGTTTGGGTGTGGAATTTGTAGAGGAACTGCAAAAATTAGTAGTTAGAAATGAGTGATTTTAAAATGATGAGTTATTTTGAGCGAACAGAAATAAGTAGTTATTTTGAGTGGCCGCAACAATATCTCGTTTGGATGTAGTTTTTTTGAGGAGGAATTGTAAATGCTCATTTTTAACTTCACCAACCAAAAATCAAACACGGTGAATTATGTGTTCCTTGTTTCTTGCTCTTTAATTCTTGTTTGTGGTTTACTATTCCTTGGTTGTCTGAAAACAATCTATTGCTTAATTCCTCGGATGCATGTATAGTGAAGGATGTGTTTTTTTCATTCATTTTTGGAGACAATAAATTTACCTTACAAATCAAAACTTATTCCACGAGTTCCTTCTTTCTCAATGGGAAAGGAAGTGCATCAGTTATGTTGTCTGTATTTAGAATTAATCTGTGCATGTTTATTGTTATTGGGAAAACTATTTTTTGGTTGCAGATATATATTTTTTGCTCCTTCCTAATTTTACTTAACATTTTTTTTTCTTCAGAATTTGTTGTTTGAGATAGTTCGATTCAGTTTCTTGAATAAATAGGTGCGCTATAGCTTTTCCCTTTTTCAGGTGTGTGGTCTTGAATGCGAAAGAAGCAGAAGATAAGCATATCATGGCAGTTCACTCCAAAAAGCATGTTGATTTGATCAAGAATATAAGCTCTAAAGAGTTTGATTCACAAAGAGATGGGATTGCCTCAAAACTAAACTCCATATACTTTAATAAAGGATCATCGGAAGCTGCTTATCTTGCGGCTGGCTCTGTCATAGATGTAATTTTTCCTAGTTGAAAGTTGAAACTTTGGCATGACACTTATGTTGCCCTTTATGTTAAGTGACTGAAATGTGTGGATTTGGTATTATAGAGCTAAGTTGCCTGACGTCTGTTCTTTTTAATATAAATTCTAATTACTTACTTTTGTTAAGGTTGCTGAAAGAGTAGCTAAAGGAGATTTAGATTCTGCAATTGCCATTGTGAGGCCACCCGGTCATCATGCTGAATATGATGAAGCTATGGGGTTCTGTTTATTCAACAACGTAGCTGTGGCAGCTAGCTTTATTTTGAATGAAAGAGTAAGACCACTTTCCAGTTATGTTTTTAGAAATTACTAAGTTATCATACGATCTTGTACTTTATTTTGTTATTCTGAAGTTCCTTTAAAAAAATTCCGAAGTTTAGGCATTTAATTTAGTTCAATATACCTTTTTTAGTAAGTTTTGACTTCATTTGGTCATTATCTTTCATGATACAGCCAGATTTGGGTGTTAAGAAAATTTTAATTGTTGATTGGGATGTTCATCATGGCAATGCAACACAAAAGATGTTTTGGACAGATCCCCATGTTTTGTTCTTCTCCGTTCACCGGTAGGTGGATTGGGATGTTGGTGTTTTCGTAAATATTTACTTTTACTCAATAGTCTCTCTATGTATTCAGTTTAATGTCATTAATGACTAAAAGGGAGCAATTAACGAAAGTTCGGAAAGTAAGTTACATTTTGAAGTTTAGGAGCTAGAAGAGATGATTTAATTTAATAGCGTTTTTTCTTGTAACTTTTTTCTTCCTTTGAAAGGTATTCCAGAAAGAAACATGATTTTTATTGTTCTTGGAGTGGAAGAGAGATGCCACCACATATGAGAACAAACTCCAGTTGTACAAAAATATGGTTCTCAGTTTCGCTCTTTTAGCTCTAAATGCCCCAGCTAGGAGAGATTTGGATATTGAGATGGATTTTCTGCAGTCTTTCATTTGAACTAATTCCATGTCAGCTAAGGGATAATTTGAAGTGGTTGTCCTTCTTAGGTATCCTGATTTTGTATTTTCTACACTGCTTGGTTGGTGGGTAGGTAATTATTGTAATAAGATAGTTAAAAGCCGATTCGTTAGATAACAACCTCGATGCCTCCAACATCCGAGATTTCTTACCTTCTCTCTTTTTTATAGCCAGATTTTTTCATATTGCTCGTTTTAAGTCATGTGTCACATCCTTTTCTTTTAATTTGAATTACATGAAATATTGGTTATTGGGTCATGAAGCGTGTGTTTTAAACTTTTTTTTTTTTATTCTATCAGAGTTTAGATCACTTTCACCAGTAATGTACCGACTTATTTTTATTAACACAGGCACGAGTTTGGAAGTTATTATCCAGCAACAGAAGATGGTTATTATACCAAGATTGGAGAAGGACCTGGAGCAGGATATAATATAAATGTTCCTTGGGAGAATGCACATTGTGGGGATGCTGACTATCTTGCAGTTTGGGACCATATCTTGGTTCCTGTTGCCAAGGAGTATAATCCGGATATGGTCATAGTCTCTGCTGGATTTGATGCAGGTTTGATGCTACTAACTCGAGATATTAAAATCCTTCTTCTCTCCACATATGTTACATGGTTGTCCAATGGGTGGGTGGTTGAAAGACATTAGAATTTTTGTAGTTTGTTCCCCCCCCTCTTACTGACTTTTTAATCTTTCTATGAAAATTTGCGTCATATTTCTCTAAAGGTATGGTCTCAGTTTGATTTATATTGAAAATTATTGTAAAAGGAAAGGTGAAATTGAAAATATCAAAATATGTTTTTATCCAGCATTCTCCCTTCTAAAATAGCAGTGATAAGAGTAATATCTTTGATTGAAAACCATTTGATATATAAAAAAATTATTCATTCTCGGAACAGCGGTTGGTGATCCTCTGGGCGGTTGCTGTGTCACACCGTATGGATACTCGATTATGTTGAAAAAGGTAAGTGTTCAGTTTATTCTATTCTGAATTTGTTTCAAATCATAAGGGTAGCTAGTTTTCTGGATATAGTTTCTTAGCGTCTCATATATATGAGGTTTAAATTTACAAGTTCTTCAGTGATGATAATGTGTGTTTGTTCTGTACCGTCTTGCATGTGTTTATGTGGCAGTAATATACAGTATATACTTTTACCAGATTATAACTTAGAAGTTTGAATTGGTATTTTAAAAGGAATTACAAACAATTCCTTCTTAGGCAGTTGACTGTGATAAACAGAACTTCAGAAATAAATAATTGTAATGGTGAATCGAGTTCAATGGTACCTTTTCCAAAATTTAAGGAATTGAGTTAGATAAGTGCTTTAACATAGTGTTGGTTTAAATACACATGTTTAACTCCCTTACCCAGATTTCAGGATGAGGGAAGAGTTCTATGAAATGCTTGTTTTCTTGGTCTTTAATGGTGAGTTTCTCCGGATAGGAATGCTCTTTAATGACACTTTAATGTGAGCTTATTGTATGAAAAACTGTTGGTTGATATAATTAAATTTACCTCAACCCATTAGCACTTCTAGGTTGATTGGTGATTTAACACGTTTCGACAAAAGGGTATATACATTTTCAACTCCAGGACAAATTCACTTTCCAGGGTACTGTGTTGTAGTCATCATACCCACGTATGGTTTAGAATATTAATTTTCTAATAATAATTTCTAGCCATAAAGCTTATAATCCTTTGCTTTTCTGTTCTGTTAACTTTGATAACCATCTTCTGGCAATGCCTTCAAAATTTGAGGTGACGCTTGCATGTTTCTTGACATACATTTAGCACCACCTTCAACTTCAGAATTGGCTTTAATGTTTTCTATAAATTAAATAAACGACAATTTGATGATCGCATTGATATCCACTTTTCCATCTTCAGTTGATGAATCTTGCCCAAGGAAAGTTTGTATTGGCGCTGGAAGGAGGATATAATCTTGACTCTATAGCGAGTTCAATGCTTGCATGTGCTGAATTTCTGCTTGATGGAAGTACAATGAATAAATCTTCAGAGACTTATCCATTTGAGTCAACATGGCGAGTGATCCAAGCAGTAAGCTCGCTCTTATTTTTCACCCTTCCGTTGTTGTCTCTCTTACCTGGATTGGTTGGAGTTTTTTTTTTCCTTCTTCTTTGCTTTGTTTTATTATCCAATGTTTCTGTTTCGCAAGTAATTTTAGCCATAAACGTCTTGTCTCTTAAAACCTTGTGACACTTGCCAGGTTCGACAAGAACTGAGTCCTTTTTGGCCAATATTTTCGGATGAATTACCAGACAATTTGATCAGTAAAACAGTGCCACTCCCGGTAATGCTTTATTTCTCAACTTTTTACCATCGTCTTATATACATTATGTATGTTATTCGAGAGTTTGGACCGAAAAATAGTCGTTCGTTTTATTAGATGAGGCGATGCCTATTTATAAAGTACAAGGTAACCCTAATGGGCCTCACAAGACTCTTTGAGCCTAAACCAATAGAAGCATAAATACAAATACAAATACATAATTCTAACACTTCCCCTCAAGCTGGAGCAAATATATCTATCATGCCCAGCTTGTTACAGAGGTAATATATGCGAGTTCCATTTAGTGCTTTGGTGAATATATCACCCAACTGTTCCCCAGTCCTCACATAACTTGTTGAGATCAAACCCTGTTGAATCTTTTCTCGGACGAAGTGACAATCAACCTCAATGTGTTTTGTTCTTTCATGAAACACTGGATTCGATGCAATGTGGATAGCAGCCTGATTGTCACACCATAATTTTGCGATCATTGTAGTTTTTATTCCAATCTCATTCACAAGAATCGAACAAGCCATACTATTTCACATGTCACTTGTGACATAGCCCTGTATTCCGCTTCAACACTTGAACGTGACACCACATTTTGTTTCTTACTCCTCCATGACACTAGATTACCTCCCATGAACACACAGTATCCTGAGGTCGATCTCCTATCTTCCTTAGATCCTGCCCAATCAGCATCCGAATAACACTCGATACTCGAATGTCCATGATTCTTGTATAACATACCCTTTCCAGGAGCAGATTTTAAATAACTCAGAATTTGTTTCACGGCTGTCCAATGTTCTACTGTGGGAGATGACATAAATTGATTCACTACACTCACAGAGTATGATATGTCTGGCCGCGTGACTGTCAAATAATTCAGTTTCCCGACTATCTTCCTGTATCTCTCAGGATCATCAAAAGCTTCACCTTCCTTGACAAGTTGTTGATTTTGTACCATTGGAGTGCTACACGGTTTCACACCCAACTTTCCTGTTTCAGTCAGTAAATCAAGAACATACTTTCGTTGAGACAAAAAGATTCCCTTCTTACTTCGCATGACCTCAATACCTAGAAAGTATTTGAGATTCCCAAGATCTTTGGTACTAAACTGGCTATGAAGGAAAGTCTTTAGTGAAGCTATCCCAGTGTCATCACTGCCAGTGATTACAATATCATCAACATACACTACCAACAGAACAATCCCGACATCCGACCGGCTATAGAACACAGAATGATCGGAAGAACACTTCTGCATTCCAAACTTCTCAAGAGCTTGGCTAAATTTTCCAAACCATGCTCGTGGGCTCTGATTCAATCCATACAAAGATTTTCGAAGGCGACAAACTTTACCATCCGCCCCCTGAGCAACAAACCCAGGTGGTTGCTCCATATATACCTCCTCCAAGAGATCACCATGCAAAAACGCATTCATAACATCTAGCTGAAATAACGGCCAACCATTTGTTGCCGCGAGAGAGATAAACAGTCGAATGGATGACATCTTTGCCACTGGAGAGAAGGTTTCACTATAGTCAATCCCATAAGTCTGAGCATACCCCTTAGCAACCAAGCGTGCTTTGAGGCGAGCAACAGAACCGTCTGAATTCATCTTGACAGCAAATACCCACTTACACCCAATTGTCTGTTTCCCTTCCGGACGAGCGACTAGCTCCCAAGTACCATTTGCATCCAATGCTTCCACCTCCTCAACCATTGTCTGGTGCCACCCAGAATGAGACAAAGCCTCACTAGTATTTGTAGGAACCGACACAGAATCAAGCGAAGTGAGAAATGAAAAAGAGGGTGAGGATATCTGATCATACGACACAAATGAGGAAATAGGATATGTACAAGAATGTTTACCTTTGCGAAGGGCAATGGGCAAGTCAAGATCATCACTCAGTTGTGGAGCAGATGGCGAAGACGGCACGGGTACGGGGCATGAAGACGGCATGGGTGCCTCTGACGGCGACACGGGTGCCTCTAACGAGCGAGGACGCCGAGTATAAACCTGAGTAAGAGGTGGAAAAGACGGAACAGGGAGCGCGAAGGAGGGTCGAAAGGCCCGGATGAAGACACCACTTCATAGATTAACAAGTCATCCTCCTCAGGGGGAGGACTGGACCCTGGACTAAATGGTGTATCCTCAAAAAAAGTGACATCAGAGGAAACAACATATCGACTAGTACTTGGACAATAACAGTGATAACGTTTTTGAACCCTAGAGTAGCCAAGAAAGATACACTTTAGAGACTTAGGGTCAAACTTGGTCCGTTGAGGACCAACATCACGCATGAAACATGTACACCCAAAGGTCTTAGGGGGAATGTGAAACAATTCTCTCGAGGGAAACAGGACTTGAAACAGAATTTGATTATCGAGAACAGAAGATGGCATGCGATTAATTAGAAAGCATGTCGTTGTGACAGCATCGACCCAAAAATGTTTTGGGACATTCATATGAAAGGACAAGGCCCTTGCAGTCTCAAGTAAATGGCGATTCTTACGTTCAGCCACTCCATTTTGAGACGGAGTGTCTGCACACGACGATTGATGAATAATACCCTTTTCACGGAGATAAGAACTAAGAATACGCGAAAAATATTCCCCCCCATTATCAGTACGCAATACTTTTATAGGAACATTAAATTGAGTACGAACTTCAGCATTAAAGGCACAAAAATGCGAAAATAACTCGGAACGATTTTTCATTAGATAAACCCAAGTAAGTCGAGAAAAGTCATCGACAAACGTAACAAAATATCGAAACCCTGTTTTAGATACAATAGGACTCGGACCCCATACATCGGAATGAACTAACTCAAACGGAGCAGTAGCTCGTTTATTGACTCGAGGACTAGAACTCAGACGGTGAAACTTTGCAAACTCACAAGATTTACAATTCAATGAAGACAGCTTACTAAAAACGGGAAATAATTTTTTCATGACAGACAACGACGGATGGCCCAGCCGACAATGAACTTCAAACGCAGATGCAGTGCTCGCACAGGCTACAACTTGGTCTGGTTGTTGATCCAAGATGTAGAGACCGCCAGCTTCATGCCCCTTACCAATAGTCTTCTTCGTCAAATGATCCTGAAACAAGCAATAACCAGGAAAAAACGAAGCAAAGCAATTTAAGTCACGACACAATTGACTCACAGAGATCAAATTATACGAGAATTTAGGGAGACACAAGACAGTAGACAAGGATAGAGTAGGGGTAAGTCTAATTGACCCTGATCCCTGAACGGGAGACAAGGACCCATCTGCTAACGTAATAGCAGGAAAACCAACAGACGATAGTGAAGTAGAAAATAAATGAATGTTACTCTGTCATATGCGCGGTGGCTCAGAATCTATAACCCACGTAGAGAGGACGAAATAAGGCAATGATTGTTACCCGACTCGGCTAAGGTGGCGGCGGGGAAGGTGGTCGGAAGACGAAGACGATGGAGCATTGGAAACTCGGAGGTTAGCGAACTCATCATCGGCATAGTTTTATCACTTTGGAAGCAATATGAGGTATGCAAGCCGCGATTCGATCATCAGTAACTTTCTGCGATCTCTCTTAAAGTGCCCAATTTTATGGCAATAGTAACATTCCATATCACTTCTAGCTTCCAGACGTTTCTCACTACCAAAATCTGGACGTCGATCATAACTAGGTCTCCCAGTCGTATTCTGACTCCTCCCACCTCGCGTGTCTCTCTTGCCAATTAGGGCACTATTCGACGAAACTACAGTAGAACTCTCCTCAGTTCGTAAAAGCCTCTGAAACACTTCATCCAAGCTCGGAAGCTCAGTTCCAGACAGGACCTGAGCTCTAGCAGCATCAAACTCGGGTCCAAGGCCCCTAAAAAAACTAATAACTCCCATCTTCTCTCTCTGGGATTGTTGTACTGCAATATCAACAGTAAAAGGCATTAGAGATTTCAACTCAACGCCATTTTTCTTATGTCTAGTGTAATAACTCAAAAGCGATTCCCCATTCCGATCAACATGGAAGTAAGCAGAGCACACATCATAAGTTTTTGTGACCTGTTCCTTCCCAGAATACAAGAATTCTACAAACTTCATAAGCTCCTTCACAGTAGAACAATGACTTATCAAGTCCACAATGTCATCGTTCATGGAGTTCGTAATTTGATTATAGAGGCGTGCATCATCACGATCCCAACTTTTTTTTCTGTCTCATCCGTTGGTGGTTTTCCATCCACATGAGCCTCCAATTCATTGTAGAGTAAATGGTTTCTAATCGCTATTCGAATCGAGGAAGTTTGAACCATTCAACTTGCGTTTCGTAATTTCCATCGAGTGAGAAATCACACTTGTATGCTTATTGTCACCCAAACTACTTCAATTAGGTCCAATCGTGCTATAAAGAACTCGATTTCACGAAAAAACACAGAACAGCCCCGTTCAACAAAAAAAAACCCTAATTCCACAATAGCTTTAAACGGCAAATCGAAGACCCTACGATGCCTAAAATCGAAAATAAACTGGACAGACTTGAAGTATACGTCGGCGCGAACAAAACCCACAAACCAATTTCCCGATCGGAGCTCCGGCAGCGGAGATTTCTCCCACGTGGCTGCTCGGATGGCGACAATTCTTCGACCACTGCGTAGATCGCTCTGCATGTCATTAGGAAACGATCGAAAAAAAATTTCGGCGTGACGATGATGAAACCCTAACCTATTTTCCTATGGCTTTGATACCATGTTATTTGAGAGTTTGGACCGAAAAATAGTCGTTCGTTTTATTAGATGAGGCGATGCCTATTTATAAAGTACAAGGTAACCCTAATGGGCCTATCGGGCCTGCTGGGCCTAAACCAATAGAAGAATAAATACAAATACAAATACATAATTCTAACAATGTCAATCTCTATTGAACTGGATTTGTGTTATCCATCAATGAAACTAGATCATTAATGGAAAGTCGAATGCTATGTAATTTTTTAAGGAATAAGAAACAATTCATTGATAAATGAAAAAGTAGAAAACAAGAGGAGATGAGAGAAAAATAAACTTAAAACAAAATCAACATCAAATACTAACGAAAGCTTAAAACAACTAGAAAAAAGAAAAAACATCATCCTCAATCAACCGCAGTCCAAAATCACCTATCGTCTGTAGATTCCACCAACAAATCCTTTGATGCTGATTTGTCACAGTTGATGTCAGAGTGCTAGTCCTGAATTTCTCTTGATAGTAGTTGAGAAGGAAAAGATAAGATGACCATAGGCACGGACATTAGCGAGATCCCAAAGACGGGTAGGCAATATTTTTTGTCAAATCTTGATGGATAGAAGAGGACGGGCTGTGCATCCTCTGAATGATCAGTTGGCTGATTGGAGAGTGAGGGTAATGTTGGTAAAATTTCGAGAGGCCCAGCGTGATCTGTAGATTGATTTTCGCAAAAAAAATGGTTTAAATCATAAGGATGAGCTTCAAAAGTTTCTTGAGCCGAGATAATAGAAGTTGGGCTTGAAAGATAAGCTTCTGTGTAGGGTTTTGTATAGGACCAAGTGGGAAAGAGATGGAAGACAAAAGAGGCTGACTCAATGTTGGAGAGGAGGAGGTTAAAAGCCTGAAGAGAGAGAGGGAAGATGAATATTAGCATTTATGAGGCCCAAATTCTATTGCAAATAATCCGCGTAGATTTTGCTCATGATAGTATATTTTGAGAAGTGATTGTGTTTGAATTTAATTGGATAATGTAAGGATCCTAATTCTGGGGATCATTCTAGAAGGGGTAATTTGGGGAAAACACCTGGGGGTGGGTATTTTGGGGGCTATTTTGTGGGTATAAATAGGCTAGTATGAGAAGGGAAGAGGGAGGTTTTATTTTGGAAGAACGTCTGAGAACTTCTTGGGAGAGATATTGGAGCTCTCGAACTCTCCGGGTAACGTTGTTCGGTTTACTTTCTATTCTTGTACTGTTGTTTGTTATTTTCATTAATGAAATCTGCTGTTTTGATGTTATTTCCATTTTATTTGGTGTTTGCCATTTTATTGTGAATTGTTGAAGAAGTACGGTATTGGATACCTTATAGTTAACCGTCTCAGCTGACTTGCTCTATATTGGCACTGTTTGACTCTTGCAATCAAGAATGTTGGAGGATAGACACGAGGAAGACCAAAAATATGTGTACATGCTAGAGAAGTTGAGCACTAAAATAGGGCTTGCCAAACACTATACTTCAAGTAAAATTAGTACTTGATTTGGCAAGATTGAGTAATAAACAAATCTGGATCTATCCTATCTACGTGAGCTGACAGTGCATAACGATTACTTCTCTTCCTAACGATTAAGGACAATGGTGGATTAAATGTCAAATGGATTGTTAAGGCCCCGTTTGATAACCATTTTGTTTTTTGTTTTTTATTTTTAAAATTTAAGCGTACAACAACTATCTTATCATAGGTTTTTTCTGATTTGGATATGTACATCTTACTTGTATTTTAATAAACAAGTCTAAAATTTGGAAACAAAAAAAGTAGCTTCCAAAAGTTTGTTTTTGTTTTTGAAATTTAGTTAGTATTCACCTTCTTTCTTAAAGAAAGATGGATACATTGTAGGAAAGATGGAACACATCGTAAGAAATTTGAGTAGAAATAAGCTTAAATTTCATAAACCAAAAACAAAAAACTAAATGGTTATCAAACGGCCTAAACTCATACATTATAAAGAGGCTATTGTGCCTTGCCAACAAGAGCTAGTTCTAAGTTCTAGTGGCATGATGTAACTCAATAATCAAGAAGTTAGGGATTCAACTTCTTCATTCTAATAAGGCTAAATGTAAAAAAAAATAATTAAAAACTATTGTGCCTTTCACGAAGGGCAAAGAGAACACCACAAGAGTATGTGCTAATGCCTTGCACTTGTCCTGTGAAGGCTTTGTGTGCTTTTCCTGCAATACTCTTTACTTCGCCTTTTTGTACATTCAACCTACCATGTTTTCTAGGATGAGCACTTGAGTTATTCAAACTTTTTGTGTTCATTCTATGGTGTTCTTGCAAGGAATCATTACCCTTATCTTGTCAGGGTTAGTATGTTCCTCTTATCTTGCTAAGCTGACAGCTGTTTTTTTTATTAAACCAAAATTCGAACTCATAACCTCTTGGTTACCAAGTTATACACCATGTAAGTTAGACAGCTTAGCGTAAAGAATGATTATCGTGATTAGTCTACATAGATTGTTATGTTAGATGGCACAAGTGTGTAATTCGTCCATTTCACCCTTAATAGAAACATAGTTCAGGTACAATCAGCTACATCTTTGTTTTTTCTCGACTTTTCACATACAGCCTGCAAAACTCCTGTGATGGGGATGAAGTGTTTCAACATACATGGGATGAAATGATCAGTTTGTGTTATGATTTAAATTTCTGGTCTGTAAATCTTTTTTTAATATTCTTGAGTATCTAGACTAGCTTATGCATACTTCGTCTATTTTCATAGAACAACTCCATGATCCTAATATATTTGGTTGTTAAGATAACTCACAGAAAATTAATTCATAAGAAGGTGTAATCATGAATTCAATCGTTACTCATTACTTAAAAATCCTTGTGTATCTTGCTTTCTCTTTGTATAATTAACATACATGTTATATGTCCCCAGGGACAACTTCGTTGGTTGAGGCTTGGGATTTTTAAGGAATGTTTCTTTGGAGGTCTTAGGTTCAAGTCCCACGAGTGAGCGTAGTTGTAAAATCTCATGTTGTCTCTTGGGTCCGGGTTTTGGGACGGACACGGGTGCCCCCGGGTTTCTCGATTTAAAAAAAAATTAACATACATGTATATGGAAGGACGGGGTAAATTTGTTGATGCTCTTACTCCATACGATAATCCTGCTAAATTATTCTTCAACTTTTCCAGGAGGTATTGCTTTCAAGCTCTGATTCGGATGATGAAGCTTCCAATGCTAGATTAAAAAGCCTCGAGGAAGTCCTTGAGAGTATTACGCTTTCGCAATCGGAAGTTAAGGAAGACGATCAGGGTAAAGAGCACTGAGATTATCTTTTCAAATCCATGTTCTTTTTTGTTGTATACTCTGTATTTTTTCAAATGAGATTCTTTAAATCACGTATTTATCAACTCTCTTGAGTACTTTGTAGTATATCCTCCAATGACTGTAAGCTCAAGTAAGGGACAAGCCACTCGAATTGTATTTGATTTTATTACAAACACGAGTTTTAAATCCTTGGATTCATTTTAGATTGAC

mRNA sequence

ATTATTCCAATGCAGAAAAAAAAAGGAATAAAGGAAAAAAGTTGACCCAACAGTTAGAGTGCGCTGACTCGCGCGTGCACTTGATTTGGCAGTGACGATCGCTCTGTAATCTCCGGCGATTGATCCGATACCGAAAAGTTTTCATCAGCCGAAGAATTTCTTCGCCGGAAAAATGGACGGTGATGGCGCAGAAATCAGGAAATTCGACGGAGAAACGGGCAATTCACGGAGGGTTGGGGTTTTGTACGACGAGAGAATGTGCAAGCACCACAAGCCTGACGGAGATTACCATCCCGAGAATCCTAGTCGAATTAGGGTGATTTGGAACAAGCTACAGACCGCTAGAATTCCTCAGAGGTGTGTGGTCTTGAATGCGAAAGAAGCAGAAGATAAGCATATCATGGCAGTTCACTCCAAAAAGCATGTTGATTTGATCAAGAATATAAGCTCTAAAGAGTTTGATTCACAAAGAGATGGGATTGCCTCAAAACTAAACTCCATATACTTTAATAAAGGATCATCGGAAGCTGCTTATCTTGCGGCTGGCTCTGTCATAGATGTTGCTGAAAGAGTAGCTAAAGGAGATTTAGATTCTGCAATTGCCATTGTGAGGCCACCCGGTCATCATGCTGAATATGATGAAGCTATGGGGTTCTGTTTATTCAACAACGTAGCTGTGGCAGCTAGCTTTATTTTGAATGAAAGACCAGATTTGGGTGTTAAGAAAATTTTAATTGTTGATTGGGATGTTCATCATGGCAATGCAACACAAAAGATGTTTTGGACAGATCCCCATGTTTTGTTCTTCTCCGTTCACCGGCACGAGTTTGGAAGTTATTATCCAGCAACAGAAGATGGTTATTATACCAAGATTGGAGAAGGACCTGGAGCAGGATATAATATAAATGTTCCTTGGGAGAATGCACATTGTGGGGATGCTGACTATCTTGCAGTTTGGGACCATATCTTGGTTCCTGTTGCCAAGGAGTATAATCCGGATATGGTCATAGTCTCTGCTGGATTTGATGCAGCGGTTGGTGATCCTCTGGGCGGTTGCTGTGTCACACCGTATGGATACTCGATTATGTTGAAAAAGTTGATGAATCTTGCCCAAGGAAAGTTTGTATTGGCGCTGGAAGGAGGATATAATCTTGACTCTATAGCGAGTTCAATGCTTGCATGTGCTGAATTTCTGCTTGATGGAAGTACAATGAATAAATCTTCAGAGACTTATCCATTTGAGTCAACATGGCGAGTGATCCAAGCAGTTCGACAAGAACTGAGTCCTTTTTGGCCAATATTTTCGGATGAATTACCAGACAATTTGATCAGTAAAACAGTGCCACTCCCGGAGGTATTGCTTTCAAGCTCTGATTCGGATGATGAAGCTTCCAATGCTAGATTAAAAAGCCTCGAGGAAGTCCTTGAGAGTATTACGCTTTCGCAATCGGAAGTTAAGGAAGACGATCAGGGTAAAGAGCACTGAGATTATCTTTTCAAATCCATGTTCTTTTTTGTTGTATACTCTGTATTTTTTCAAATGAGATTCTTTAAATCACGTATTTATCAACTCTCTTGAGTACTTTGTAGTATATCCTCCAATGACTGTAAGCTCAAGTAAGGGACAAGCCACTCGAATTGTATTTGATTTTATTACAAACACGAGTTTTAAATCCTTGGATTCATTTTAGATTGAC

Coding sequence (CDS)

ATGGACGGTGATGGCGCAGAAATCAGGAAATTCGACGGAGAAACGGGCAATTCACGGAGGGTTGGGGTTTTGTACGACGAGAGAATGTGCAAGCACCACAAGCCTGACGGAGATTACCATCCCGAGAATCCTAGTCGAATTAGGGTGATTTGGAACAAGCTACAGACCGCTAGAATTCCTCAGAGGTGTGTGGTCTTGAATGCGAAAGAAGCAGAAGATAAGCATATCATGGCAGTTCACTCCAAAAAGCATGTTGATTTGATCAAGAATATAAGCTCTAAAGAGTTTGATTCACAAAGAGATGGGATTGCCTCAAAACTAAACTCCATATACTTTAATAAAGGATCATCGGAAGCTGCTTATCTTGCGGCTGGCTCTGTCATAGATGTTGCTGAAAGAGTAGCTAAAGGAGATTTAGATTCTGCAATTGCCATTGTGAGGCCACCCGGTCATCATGCTGAATATGATGAAGCTATGGGGTTCTGTTTATTCAACAACGTAGCTGTGGCAGCTAGCTTTATTTTGAATGAAAGACCAGATTTGGGTGTTAAGAAAATTTTAATTGTTGATTGGGATGTTCATCATGGCAATGCAACACAAAAGATGTTTTGGACAGATCCCCATGTTTTGTTCTTCTCCGTTCACCGGCACGAGTTTGGAAGTTATTATCCAGCAACAGAAGATGGTTATTATACCAAGATTGGAGAAGGACCTGGAGCAGGATATAATATAAATGTTCCTTGGGAGAATGCACATTGTGGGGATGCTGACTATCTTGCAGTTTGGGACCATATCTTGGTTCCTGTTGCCAAGGAGTATAATCCGGATATGGTCATAGTCTCTGCTGGATTTGATGCAGCGGTTGGTGATCCTCTGGGCGGTTGCTGTGTCACACCGTATGGATACTCGATTATGTTGAAAAAGTTGATGAATCTTGCCCAAGGAAAGTTTGTATTGGCGCTGGAAGGAGGATATAATCTTGACTCTATAGCGAGTTCAATGCTTGCATGTGCTGAATTTCTGCTTGATGGAAGTACAATGAATAAATCTTCAGAGACTTATCCATTTGAGTCAACATGGCGAGTGATCCAAGCAGTTCGACAAGAACTGAGTCCTTTTTGGCCAATATTTTCGGATGAATTACCAGACAATTTGATCAGTAAAACAGTGCCACTCCCGGAGGTATTGCTTTCAAGCTCTGATTCGGATGATGAAGCTTCCAATGCTAGATTAAAAAGCCTCGAGGAAGTCCTTGAGAGTATTACGCTTTCGCAATCGGAAGTTAAGGAAGACGATCAGGGTAAAGAGCACTGA

Protein sequence

MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIPQRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPDLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGAGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPYGYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTWRVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLESITLSQSEVKEDDQGKEH

Homology

[Close]

BLAST of Sed0000594 vs. NCBI nr
Match: XP_038878340.1 (histone deacetylase 5 [Benincasa hispida])

HSP 1 Score: 778.9 bits (2010), Expect = 2.4e-221
Identity = 381/436 (87.39%), Postives = 405/436 (92.89%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           M+ DG+  RKF+G  G+S RVGVLYD+RMCKHH PDGDYHPENP+RIR IWNKL +A I 
Sbjct: 1   MEVDGSGTRKFNGSNGDSPRVGVLYDKRMCKHHTPDGDYHPENPNRIRAIWNKLLSAGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVLN KEAEDKHI+AVHSK HV+LIKNISSKEFDS+RD IAS+LNSIYFN+ SSEAA
Sbjct: 61  QRCVVLNGKEAEDKHILAVHSKNHVNLIKNISSKEFDSRRDKIASQLNSIYFNEESSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT+DGYYT +GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWENA CGD DYLAVWDHIL+PVAKEYNPDM+IVSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENARCGDVDYLAVWDHILLPVAKEYNPDMIIVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNLAQGK VLALEGGYNLDSIASSMLACAE LLDG TM KSSETYPFESTW
Sbjct: 301 GYSIMLKKLMNLAQGKIVLALEGGYNLDSIASSMLACAEVLLDGRTMIKSSETYPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEA-SNARLKSLEEVLE 420
           RVIQAVRQELSPFWPI S+ELPDNLIS+ VPLPEVLLSSSDSDDEA SN RLKSLEEVL+
Sbjct: 361 RVIQAVRQELSPFWPILSEELPDNLISRKVPLPEVLLSSSDSDDEASSNGRLKSLEEVLQ 420

Query: 421 SITLSQSEVKEDDQGK 436
            ITLSQ EVKED QG+
Sbjct: 421 GITLSQLEVKEDGQGQ 436

[Close]

BLAST of Sed0000594 vs. NCBI nr
Match: XP_022987953.1 (histone deacetylase 5 [Cucurbita maxima])

HSP 1 Score: 775.0 bits (2000), Expect = 3.4e-220
Identity = 373/435 (85.75%), Postives = 403/435 (92.64%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD  G+  RKFDG  G+SRRVGVLYDERMCKHH PDGDYHPENP+RIR IWNKLQ++ I 
Sbjct: 1   MDVHGSGTRKFDGGNGDSRRVGVLYDERMCKHHTPDGDYHPENPNRIRAIWNKLQSSGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVLN KEAEDKHI+AVHSK HVDLIK ISSKE DS+RD IAS+LNSIYFNKGSSEAA
Sbjct: 61  QRCVVLNGKEAEDKHILAVHSKNHVDLIKKISSKELDSRRDKIASQLNSIYFNKGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAERVAQGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT+DGYYT +GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWRDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  C DADYLAVWDHIL+PVAKEYNPDM+IVSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGQCRDADYLAVWDHILLPVAKEYNPDMIIVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNL QGK VLALEGGYNLDSIA+SMLACAE L+DG+TMN SSET PFESTW
Sbjct: 301 GYSIMLKKLMNLGQGKIVLALEGGYNLDSIATSMLACAELLVDGTTMNNSSETCPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           RVIQAVR+ELSPFWP+ SDELPDNL SK VP+PEVLLSSSDS+DEAS++RLKSLEE+L+ 
Sbjct: 361 RVIQAVRRELSPFWPMLSDELPDNLTSKKVPVPEVLLSSSDSEDEASDSRLKSLEEILQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           ITLSQ EVKED+QG+
Sbjct: 421 ITLSQMEVKEDNQGQ 435

[Close]

BLAST of Sed0000594 vs. NCBI nr
Match: XP_004138195.1 (histone deacetylase 5 [Cucumis sativus] >KGN63723.1 hypothetical protein Csa_014112 [Cucumis sativus])

HSP 1 Score: 772.7 bits (1994), Expect = 1.7e-219
Identity = 372/435 (85.52%), Postives = 399/435 (91.72%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD DG+   KF+G  G+SRR+GVLYD+RMCKHH PDGDYHPENP RIR IWNKL +A I 
Sbjct: 1   MDVDGSGTTKFNGINGDSRRLGVLYDDRMCKHHTPDGDYHPENPYRIRAIWNKLHSAGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVL  KEAEDKHI+AVHSK HV LIK ISSKEFDS+RD IASKLNSIYFN+GSSEA+
Sbjct: 61  QRCVVLKGKEAEDKHILAVHSKNHVKLIKEISSKEFDSRRDKIASKLNSIYFNEGSSEAS 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAE+VAKGDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAEKVAKGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHE+GS+YPAT DG+YTK+GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEYGSFYPATHDGFYTKVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  CGDADYLAVWDHIL+PVA+EYNPDM++VSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNLAQGK VLALEGGYNLDSIASSMLACAE LLDG T+NK  ETYPFESTW
Sbjct: 301 GYSIMLKKLMNLAQGKIVLALEGGYNLDSIASSMLACAELLLDGRTVNKPQETYPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           +VIQAVRQELSPFWPI SDE+PDNLISK VPLPEVLLSSSDSDDEASN RLKSLEEVL+ 
Sbjct: 361 QVIQAVRQELSPFWPILSDEIPDNLISKKVPLPEVLLSSSDSDDEASNGRLKSLEEVLQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           IT SQ EVKED QG+
Sbjct: 421 ITFSQLEVKEDSQGQ 435

[Close]

BLAST of Sed0000594 vs. NCBI nr
Match: XP_023516037.1 (histone deacetylase 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 770.8 bits (1989), Expect = 6.4e-219
Identity = 371/435 (85.29%), Postives = 402/435 (92.41%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD  G+  RKFDG  G+SRRVGVLYDERMCKHH PDGDYHPENP+RIR IWNKLQ++ I 
Sbjct: 1   MDVHGSGPRKFDGGNGDSRRVGVLYDERMCKHHTPDGDYHPENPNRIRAIWNKLQSSGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVLN KEAEDKHI+AVHSK HVDLIKNISSKEFDS+RD IA++LNSIYFNKGSSEAA
Sbjct: 61  QRCVVLNGKEAEDKHILAVHSKNHVDLIKNISSKEFDSRRDKIAAQLNSIYFNKGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAERVAQGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT+DGYYT +GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWRDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  C DADYLAVWDHIL+PVAKEYNPDM+IVSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGQCRDADYLAVWDHILLPVAKEYNPDMIIVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIML+KLMNL QGK VLALEGGYNLDSIA+S LACAE L+DG TMN SSET PFESTW
Sbjct: 301 GYSIMLEKLMNLGQGKIVLALEGGYNLDSIATSTLACAELLVDGRTMNNSSETCPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           RVIQAVR+ELSPFWP+ SDELPDNL SK VP+PEVLLSSSDS+DEAS++RLKSLEE+L+ 
Sbjct: 361 RVIQAVRRELSPFWPMLSDELPDNLTSKKVPVPEVLLSSSDSEDEASDSRLKSLEEILQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           ITLS+ EVKED QG+
Sbjct: 421 ITLSRVEVKEDSQGQ 435

[Close]

BLAST of Sed0000594 vs. NCBI nr
Match: XP_008453265.1 (PREDICTED: histone deacetylase 5 [Cucumis melo])

HSP 1 Score: 768.5 bits (1983), Expect = 3.2e-218
Identity = 372/435 (85.52%), Postives = 399/435 (91.72%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD D +E  KF+G  G+SRR+GVLYDERMCKHH PDGDYHPENP RIR IWNKL  A I 
Sbjct: 1   MDVDDSETTKFNGINGDSRRLGVLYDERMCKHHTPDGDYHPENPYRIRAIWNKLHAAGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVL  KEAEDKHI+AVHSK HV LIK ISSKEFDSQRD IA+KLNSIYFN+GSSEAA
Sbjct: 61  QRCVVLKGKEAEDKHILAVHSKNHVKLIKKISSKEFDSQRDKIAAKLNSIYFNEGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAE+VA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAEKVAEGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT DG+YT++GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEFGSFYPATHDGFYTQVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  CGDADYLAVWDHIL+PVA+EYNPDM++VSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNLAQGK VLALEGGYNLDSIA+SMLACAE LLDG T+NKSSETYPFESTW
Sbjct: 301 GYSIMLKKLMNLAQGKIVLALEGGYNLDSIANSMLACAELLLDGRTVNKSSETYPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           +VIQAVRQELSPFWPI SDE+PDNLISK VPLPEVLLSSSDSDDEA N RLK+LEEVL+ 
Sbjct: 361 QVIQAVRQELSPFWPILSDEIPDNLISKKVPLPEVLLSSSDSDDEA-NGRLKTLEEVLQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           IT SQ EVKED QG+
Sbjct: 421 ITFSQLEVKEDSQGQ 434

[Close]

BLAST of Sed0000594 vs. ExPASy Swiss-Prot
Match: Q8RX28 (Histone deacetylase 5 OS=Arabidopsis thaliana OX=3702 GN=HDA5 PE=1 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 1.3e-166
Identity = 277/406 (68.23%), Postives = 328/406 (80.79%), Query Frame = 0


Query: 2   DGDGAEIRKFDGE-TGN-SRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARI 61
           +  G +I   DG+  GN  R+VG++YDE MCKH  PDG+ HPE P RIRVIW KLQ A +
Sbjct: 6   ESSGKKIGDCDGKVAGNRQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGV 65

Query: 62  PQRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEA 121
            QRCVVL + +AEDKH+  VH+K HV+L+K+IS+K+ D +R+ IAS+LNSIY N GSSEA
Sbjct: 66  SQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEA 125

Query: 122 AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERP 181
           AYLAAGSV+ +AE+VA+G+LD   AIVRPPGHHAE DEAMGFCLFNNVAVAASF+LNERP
Sbjct: 126 AYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERP 185

Query: 182 DLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPG 241
           DLGVKKILIVDWDVHHGN TQKMFW DP VLFFSVHRHE+G +YPA +DG Y  +GEGPG
Sbjct: 186 DLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPG 245

Query: 242 AGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTP 301
            G+NINVPW+   CGDADYLA WDHIL+PVA+E+NPD++ +SAGFDAA+ DPLGGCCVTP
Sbjct: 246 EGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTP 305

Query: 302 YGYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFEST 361
           YGYS+MLKKLM  AQGK VLALEGGYNLDSIA S LAC + LL+   +    E YPFEST
Sbjct: 306 YGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFEST 365

Query: 362 WRVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDE 406
           WRVIQAVR+ L  +WP  +DEL   LI++  P P +L+SSSDS+ E
Sbjct: 366 WRVIQAVRKRLCTYWPSLADELSWKLINQKTPTPIILISSSDSETE 411

[Close]

BLAST of Sed0000594 vs. ExPASy Swiss-Prot
Match: Q8LRK8 (Histone deacetylase 18 OS=Arabidopsis thaliana OX=3702 GN=HDA18 PE=2 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-151
Identity = 261/435 (60.00%), Postives = 323/435 (74.25%), Query Frame = 0


Query: 2   DGDGAEIRKFDGETG--NSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARI 61
           +  G +  + DG+    + R+VG++YDE MCKH  P+G    E P RIRVIW KLQ A +
Sbjct: 39  ESSGKKCGEGDGKVAGKSQRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGV 98

Query: 62  PQRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEA 121
            QRCVVL   +AEDKH+  VH+KKHV+L+K+IS+K+ DS+R+ IAS+L+SIY N GSSEA
Sbjct: 99  TQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEA 158

Query: 122 AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERP 181
           AYLAAGSV+ VAE+VA+G+LD   AIVRPPGHHAE DEAMGFCLFNNVAVAASF+LNERP
Sbjct: 159 AYLAAGSVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERP 218

Query: 182 DLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPG 241
           DL VKKILIVDWD+HHGN TQKMFW D  VL FSVHRH+ GS+YP  +DG +  +GEGPG
Sbjct: 219 DLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPG 278

Query: 242 AGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTP 301
            G+NINVPWE   CGDADYLAVW+HIL+PV KE+ PD++++SAGFDAA+GDPLGGCCVTP
Sbjct: 279 EGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTP 338

Query: 302 YGYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFEST 361
           YGYS+MLKKLM  A GK VLALEGGYNL+S+  S LAC + LL+   ++ SSETYP EST
Sbjct: 339 YGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLEST 398

Query: 362 WRVIQAVRQELSPFWPIFSDELPDN--------------LISKTVPLPEVLLSSSDSDDE 421
            RVIQAVR+ L  +WP     +  N               + + V   + L+++ D + E
Sbjct: 399 RRVIQAVRERLCTYWPSLDASMASNENLKNPSAERNSADALLREVEELKSLMAARDGELE 458

[Close]

BLAST of Sed0000594 vs. ExPASy Swiss-Prot
Match: Q9Z2V5 (Histone deacetylase 6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3)

HSP 1 Score: 292.7 bits (748), Expect = 6.7e-78
Identity = 148/326 (45.40%), Postives = 209/326 (64.11%), Query Frame = 0


Query: 20  RVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIPQRCVVLNAKEAEDKHIMAV 79
           R G++YDE+M  H     ++HPE P RI  I   L+   +  RC++L A+ A D  ++  
Sbjct: 479 RTGLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTC 538

Query: 80  HSKKHVDLIKNISS-KEFDSQRDGIASKLNSIYFNKGSSEAAYLAAGSVIDVAERVAKGD 139
           HS ++V+ ++     K  D  R+G  +  +SIY    +   A LA G+   + E V  G+
Sbjct: 539 HSAEYVEHLRTTEKMKTRDLHREG--ANFDSIYICPSTFACAKLATGAACRLVEAVLSGE 598

Query: 140 LDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAA--SFILNERPDLGVKKILIVDWDVHHG 199
           + + IA+VRPPGHHAE + A GFC FN+VAVAA  + I+  R      +ILIVDWDVHHG
Sbjct: 599 VLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGR----ALRILIVDWDVHHG 658

Query: 200 NATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGAGYNINVPWENAHCGDA 259
           N TQ +F  DP VL+ S+HR++ G+++P  ++G  +++G   G G+ +NVPW     GDA
Sbjct: 659 NGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDA 718

Query: 260 DYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPYGYSIMLKKLMNLAQGK 319
           DYLA W  +++P+A E+NP++V++SAGFDAA GDPLGGC VTP GY+ +   LM LA G+
Sbjct: 719 DYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGR 778

Query: 320 FVLALEGGYNLDSIASSMLACAEFLL 343
            +L LEGGYNL SI+ SM AC   LL
Sbjct: 779 IILILEGGYNLASISESMAACTHSLL 798

[Close]

BLAST of Sed0000594 vs. ExPASy Swiss-Prot
Match: Q5A960 (Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=HDA1 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.1e-75
Identity = 165/422 (39.10%), Postives = 239/422 (56.64%), Query Frame = 0


Query: 20  RVGVLYDERMCKHHKPDGDY------HPENPSRIRVIWNKLQTA------------RIPQ 79
           + G++YD RM  H K    Y      HPE+P RI  I+ KL  A             I  
Sbjct: 118 KTGLVYDVRMRYHAKVFTSYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGP 177

Query: 80  RCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKL---NSIYFNKGSSE 139
             + +  +EA  + I+ VHS+ H   +K I S E D  RD +  +    +SIY N  S  
Sbjct: 178 FMLKIPIREATSEEILQVHSEDH---LKFIQSTE-DMSRDQLLKETETGDSIYVNNDSYL 237

Query: 140 AAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNER 199
           +A L+ G  I+  + V +G + +++AIVRPPGHHAE +   GFCLF+NVAVAA  +L   
Sbjct: 238 SAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNY 297

Query: 200 PDLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGP 259
           P+  V++I+IVDWD+HHGN TQK F+ DP VL+ S+HR E G +YP T+ G   ++GEGP
Sbjct: 298 PE-SVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGP 357

Query: 260 GAGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVT 319
           G G+ IN+PW ++   D DY+  ++ I+ PV  E++PD++IVS+GFDAA GD +G C VT
Sbjct: 358 GEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVT 417

Query: 320 PYGYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFES 379
           P GY  M   L  +A+GK  + LEGGYNLDSI+ S LA A+ L+ G     +    P   
Sbjct: 418 PAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLV-GEPPENTITLRPQAE 477

Query: 380 TWRVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVL 421
              V+  V +  S ++    + +P+ +      L +V         E SN +L ++ + +
Sbjct: 478 AIEVVDEVIKIQSKYFKSLRNGIPNGIFEDVYDLADV---------EKSNYKLVNIADPI 524

[Close]

BLAST of Sed0000594 vs. ExPASy Swiss-Prot
Match: P56523 (Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=clr3 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.7e-74
Identity = 152/364 (41.76%), Postives = 216/364 (59.34%), Query Frame = 0


Query: 19  RRVGVLYDERMCKHHK-PDGDYHPENPSRIRVIWNKLQTA----RIPQRCVV---LNAKE 78
           ++ G+ YD RM  H    + D HPE+P R+  ++  ++ A     +P    V   + A+E
Sbjct: 55  KKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPARE 114

Query: 79  AEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAAYLAAGSVIDV 138
           A  + ++ VHS++  D + N + K        +    +S+Y+N  S+  A LA GS I+ 
Sbjct: 115 ATLEELLQVHSQEMYDRVTN-TEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIET 174

Query: 139 AERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPDLGVKKILIVD 198
              V  G + +A A+VRPPGHHAE  +  GFCLFNNV+V A  +L   PD  +K++LIVD
Sbjct: 175 CTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPD-KIKRVLIVD 234

Query: 199 WDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGAGYNINVPWEN 258
           WD+HHGN TQ  F+ DP+VL+ S+HR+E G +YP T  G     GEGPG G  +N+PW  
Sbjct: 235 WDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSC 294

Query: 259 AHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPYGYSIMLKKLM 318
           A  GD DY+  +  +++PVA E++PD+VIVS GFDAA GD +G   +TP  Y+ M + LM
Sbjct: 295 AGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLM 354

Query: 319 NLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTWRVIQAVRQEL 375
            LA GK  ++LEGGYNLDSI++S LA A+ LL G    +   TY        I  V +  
Sbjct: 355 GLADGKVFISLEGGYNLDSISTSALAVAQSLL-GIPPGRLHTTYACPQAVATINHVTKIQ 414

[Close]

BLAST of Sed0000594 vs. ExPASy TrEMBL
Match: A0A6J1JKV3 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111485349 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.6e-220
Identity = 373/435 (85.75%), Postives = 403/435 (92.64%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD  G+  RKFDG  G+SRRVGVLYDERMCKHH PDGDYHPENP+RIR IWNKLQ++ I 
Sbjct: 1   MDVHGSGTRKFDGGNGDSRRVGVLYDERMCKHHTPDGDYHPENPNRIRAIWNKLQSSGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVLN KEAEDKHI+AVHSK HVDLIK ISSKE DS+RD IAS+LNSIYFNKGSSEAA
Sbjct: 61  QRCVVLNGKEAEDKHILAVHSKNHVDLIKKISSKELDSRRDKIASQLNSIYFNKGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAERVAQGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT+DGYYT +GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWRDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  C DADYLAVWDHIL+PVAKEYNPDM+IVSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGQCRDADYLAVWDHILLPVAKEYNPDMIIVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNL QGK VLALEGGYNLDSIA+SMLACAE L+DG+TMN SSET PFESTW
Sbjct: 301 GYSIMLKKLMNLGQGKIVLALEGGYNLDSIATSMLACAELLVDGTTMNNSSETCPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           RVIQAVR+ELSPFWP+ SDELPDNL SK VP+PEVLLSSSDS+DEAS++RLKSLEE+L+ 
Sbjct: 361 RVIQAVRRELSPFWPMLSDELPDNLTSKKVPVPEVLLSSSDSEDEASDSRLKSLEEILQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           ITLSQ EVKED+QG+
Sbjct: 421 ITLSQMEVKEDNQGQ 435

[Close]

BLAST of Sed0000594 vs. ExPASy TrEMBL
Match: A0A0A0LPI7 (Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_1G013220 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 8.2e-220
Identity = 372/435 (85.52%), Postives = 399/435 (91.72%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD DG+   KF+G  G+SRR+GVLYD+RMCKHH PDGDYHPENP RIR IWNKL +A I 
Sbjct: 1   MDVDGSGTTKFNGINGDSRRLGVLYDDRMCKHHTPDGDYHPENPYRIRAIWNKLHSAGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVL  KEAEDKHI+AVHSK HV LIK ISSKEFDS+RD IASKLNSIYFN+GSSEA+
Sbjct: 61  QRCVVLKGKEAEDKHILAVHSKNHVKLIKEISSKEFDSRRDKIASKLNSIYFNEGSSEAS 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAE+VAKGDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAEKVAKGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHE+GS+YPAT DG+YTK+GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEYGSFYPATHDGFYTKVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  CGDADYLAVWDHIL+PVA+EYNPDM++VSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNLAQGK VLALEGGYNLDSIASSMLACAE LLDG T+NK  ETYPFESTW
Sbjct: 301 GYSIMLKKLMNLAQGKIVLALEGGYNLDSIASSMLACAELLLDGRTVNKPQETYPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           +VIQAVRQELSPFWPI SDE+PDNLISK VPLPEVLLSSSDSDDEASN RLKSLEEVL+ 
Sbjct: 361 QVIQAVRQELSPFWPILSDEIPDNLISKKVPLPEVLLSSSDSDDEASNGRLKSLEEVLQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           IT SQ EVKED QG+
Sbjct: 421 ITFSQLEVKEDSQGQ 435

[Close]

BLAST of Sed0000594 vs. ExPASy TrEMBL
Match: A0A5A7UWV4 (Histone deacetylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002930 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.5e-218
Identity = 372/435 (85.52%), Postives = 399/435 (91.72%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD D +E  KF+G  G+SRR+GVLYDERMCKHH PDGDYHPENP RIR IWNKL  A I 
Sbjct: 1   MDVDDSETTKFNGINGDSRRLGVLYDERMCKHHTPDGDYHPENPYRIRAIWNKLHAAGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVL  KEAEDKHI+AVHSK HV LIK ISSKEFDSQRD IA+KLNSIYFN+GSSEAA
Sbjct: 61  QRCVVLKGKEAEDKHILAVHSKNHVKLIKKISSKEFDSQRDKIAAKLNSIYFNEGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAE+VA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAEKVAEGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT DG+YT++GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEFGSFYPATHDGFYTQVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  CGDADYLAVWDHIL+PVA+EYNPDM++VSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNLAQGK VLALEGGYNLDSIA+SMLACAE LLDG T+NKSSETYPFESTW
Sbjct: 301 GYSIMLKKLMNLAQGKIVLALEGGYNLDSIANSMLACAELLLDGRTVNKSSETYPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           +VIQAVRQELSPFWPI SDE+PDNLISK VPLPEVLLSSSDSDDEA N RLK+LEEVL+ 
Sbjct: 361 QVIQAVRQELSPFWPILSDEIPDNLISKKVPLPEVLLSSSDSDDEA-NGRLKTLEEVLQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           IT SQ EVKED QG+
Sbjct: 421 ITFSQLEVKEDSQGQ 434

[Close]

BLAST of Sed0000594 vs. ExPASy TrEMBL
Match: A0A6J1E149 (Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111429854 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.5e-218
Identity = 370/435 (85.06%), Postives = 402/435 (92.41%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD  G+  RKFDG  G+SRRVGVLYDERMCKHH PDGDYHPENP+RIR IWNKLQ++ I 
Sbjct: 1   MDVHGSGPRKFDGGNGDSRRVGVLYDERMCKHHTPDGDYHPENPNRIRAIWNKLQSSGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVLN KEAEDKHI+AVHSK HVDLIKNISSKEFDS+RD IA++LNSIYFNKGSSEAA
Sbjct: 61  QRCVVLNGKEAEDKHILAVHSKNHVDLIKNISSKEFDSRRDKIAAQLNSIYFNKGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNER D
Sbjct: 121 YLAAGSVIDVAERVAQGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERLD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT+DGYYT +GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWRDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  C DADYLAVWDH+L+PVAKEY+PDM+IVSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGQCRDADYLAVWDHVLLPVAKEYSPDMIIVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNL QGK VLALEGGYNLDSIA+SMLACAE L+DG TMN SSET PFESTW
Sbjct: 301 GYSIMLKKLMNLGQGKIVLALEGGYNLDSIATSMLACAELLVDGRTMNNSSETCPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           RVIQAVR+ELSPFWP+ S+ELPDNL SK VP+PEVLLSSSDS+DEAS++RLKSLEE+L+ 
Sbjct: 361 RVIQAVRRELSPFWPMLSEELPDNLTSKKVPVPEVLLSSSDSEDEASDSRLKSLEEILQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           ITLSQ EVKED QG+
Sbjct: 421 ITLSQVEVKEDSQGQ 435

[Close]

BLAST of Sed0000594 vs. ExPASy TrEMBL
Match: A0A1S3BWL5 (Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103494038 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.5e-218
Identity = 372/435 (85.52%), Postives = 399/435 (91.72%), Query Frame = 0


Query: 1   MDGDGAEIRKFDGETGNSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARIP 60
           MD D +E  KF+G  G+SRR+GVLYDERMCKHH PDGDYHPENP RIR IWNKL  A I 
Sbjct: 1   MDVDDSETTKFNGINGDSRRLGVLYDERMCKHHTPDGDYHPENPYRIRAIWNKLHAAGIL 60

Query: 61  QRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAA 120
           QRCVVL  KEAEDKHI+AVHSK HV LIK ISSKEFDSQRD IA+KLNSIYFN+GSSEAA
Sbjct: 61  QRCVVLKGKEAEDKHILAVHSKNHVKLIKKISSKEFDSQRDKIAAKLNSIYFNEGSSEAA 120

Query: 121 YLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPD 180
           YLAAGSVIDVAE+VA+GDLDS IAIVRPPGHHAE+DEAMGFCLFNN+AVAASFILNERPD
Sbjct: 121 YLAAGSVIDVAEKVAEGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPD 180

Query: 181 LGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGA 240
           LG+KKILIVDWDVHHGNATQKMFW DP VLFFSVHRHEFGS+YPAT DG+YT++GEGPGA
Sbjct: 181 LGIKKILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEFGSFYPATHDGFYTQVGEGPGA 240

Query: 241 GYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPY 300
           GYNINVPWEN  CGDADYLAVWDHIL+PVA+EYNPDM++VSAGFDAAVGDPLGGCCVTPY
Sbjct: 241 GYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPY 300

Query: 301 GYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFESTW 360
           GYSIMLKKLMNLAQGK VLALEGGYNLDSIA+SMLACAE LLDG T+NKSSETYPFESTW
Sbjct: 301 GYSIMLKKLMNLAQGKIVLALEGGYNLDSIANSMLACAELLLDGRTVNKSSETYPFESTW 360

Query: 361 RVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSLEEVLES 420
           +VIQAVRQELSPFWPI SDE+PDNLISK VPLPEVLLSSSDSDDEA N RLK+LEEVL+ 
Sbjct: 361 QVIQAVRQELSPFWPILSDEIPDNLISKKVPLPEVLLSSSDSDDEA-NGRLKTLEEVLQG 420

Query: 421 ITLSQSEVKEDDQGK 436
           IT SQ EVKED QG+
Sbjct: 421 ITFSQLEVKEDSQGQ 434

[Close]

BLAST of Sed0000594 vs. TAIR 10
Match: AT5G61060.1 (histone deacetylase 5 )

HSP 1 Score: 587.4 bits (1513), Expect = 9.4e-168
Identity = 277/406 (68.23%), Postives = 328/406 (80.79%), Query Frame = 0


Query: 2   DGDGAEIRKFDGE-TGN-SRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARI 61
           +  G +I   DG+  GN  R+VG++YDE MCKH  PDG+ HPE P RIRVIW KLQ A +
Sbjct: 6   ESSGKKIGDCDGKVAGNRQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGV 65

Query: 62  PQRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEA 121
            QRCVVL + +AEDKH+  VH+K HV+L+K+IS+K+ D +R+ IAS+LNSIY N GSSEA
Sbjct: 66  SQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEA 125

Query: 122 AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERP 181
           AYLAAGSV+ +AE+VA+G+LD   AIVRPPGHHAE DEAMGFCLFNNVAVAASF+LNERP
Sbjct: 126 AYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERP 185

Query: 182 DLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPG 241
           DLGVKKILIVDWDVHHGN TQKMFW DP VLFFSVHRHE+G +YPA +DG Y  +GEGPG
Sbjct: 186 DLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPG 245

Query: 242 AGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTP 301
            G+NINVPW+   CGDADYLA WDHIL+PVA+E+NPD++ +SAGFDAA+ DPLGGCCVTP
Sbjct: 246 EGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTP 305

Query: 302 YGYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFEST 361
           YGYS+MLKKLM  AQGK VLALEGGYNLDSIA S LAC + LL+   +    E YPFEST
Sbjct: 306 YGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFEST 365

Query: 362 WRVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDE 406
           WRVIQAVR+ L  +WP  +DEL   LI++  P P +L+SSSDS+ E
Sbjct: 366 WRVIQAVRKRLCTYWPSLADELSWKLINQKTPTPIILISSSDSETE 411

[Close]

BLAST of Sed0000594 vs. TAIR 10
Match: AT5G61060.2 (histone deacetylase 5 )

HSP 1 Score: 581.6 bits (1498), Expect = 5.1e-166
Identity = 277/410 (67.56%), Postives = 328/410 (80.00%), Query Frame = 0


Query: 2   DGDGAEIRKFDGE-TGN-SRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARI 61
           +  G +I   DG+  GN  R+VG++YDE MCKH  PDG+ HPE P RIRVIW KLQ A +
Sbjct: 6   ESSGKKIGDCDGKVAGNRQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGV 65

Query: 62  PQRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEA 121
            QRCVVL + +AEDKH+  VH+K HV+L+K+IS+K+ D +R+ IAS+LNSIY N GSSEA
Sbjct: 66  SQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEA 125

Query: 122 AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERP 181
           AYLAAGSV+ +AE+VA+G+LD   AIVRPPGHHAE DEAMGFCLFNNVAVAASF+LNERP
Sbjct: 126 AYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERP 185

Query: 182 DLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPG 241
           DLGVKKILIVDWDVHHGN TQKMFW DP VLFFSVHRHE+G +YPA +DG Y  +GEGPG
Sbjct: 186 DLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPG 245

Query: 242 AGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTP 301
            G+NINVPW+   CGDADYLA WDHIL+PVA+E+NPD++ +SAGFDAA+ DPLGGCCVTP
Sbjct: 246 EGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTP 305

Query: 302 YGYSIMLKK----LMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYP 361
           YGYS+MLKK    LM  AQGK VLALEGGYNLDSIA S LAC + LL+   +    E YP
Sbjct: 306 YGYSVMLKKVGVELMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYP 365

Query: 362 FESTWRVIQAVRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDE 406
           FESTWRVIQAVR+ L  +WP  +DEL   LI++  P P +L+SSSDS+ E
Sbjct: 366 FESTWRVIQAVRKRLCTYWPSLADELSWKLINQKTPTPIILISSSDSETE 415

[Close]

BLAST of Sed0000594 vs. TAIR 10
Match: AT5G61070.1 (histone deacetylase of the RPD3/HDA1 superfamily 18 )

HSP 1 Score: 535.8 bits (1379), Expect = 3.2e-152
Identity = 261/435 (60.00%), Postives = 323/435 (74.25%), Query Frame = 0


Query: 2   DGDGAEIRKFDGETG--NSRRVGVLYDERMCKHHKPDGDYHPENPSRIRVIWNKLQTARI 61
           +  G +  + DG+    + R+VG++YDE MCKH  P+G    E P RIRVIW KLQ A +
Sbjct: 39  ESSGKKCGEGDGKVAGKSQRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGV 98

Query: 62  PQRCVVLNAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEA 121
            QRCVVL   +AEDKH+  VH+KKHV+L+K+IS+K+ DS+R+ IAS+L+SIY N GSSEA
Sbjct: 99  TQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEA 158

Query: 122 AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERP 181
           AYLAAGSV+ VAE+VA+G+LD   AIVRPPGHHAE DEAMGFCLFNNVAVAASF+LNERP
Sbjct: 159 AYLAAGSVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERP 218

Query: 182 DLGVKKILIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPG 241
           DL VKKILIVDWD+HHGN TQKMFW D  VL FSVHRH+ GS+YP  +DG +  +GEGPG
Sbjct: 219 DLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPG 278

Query: 242 AGYNINVPWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTP 301
            G+NINVPWE   CGDADYLAVW+HIL+PV KE+ PD++++SAGFDAA+GDPLGGCCVTP
Sbjct: 279 EGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTP 338

Query: 302 YGYSIMLKKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNKSSETYPFEST 361
           YGYS+MLKKLM  A GK VLALEGGYNL+S+  S LAC + LL+   ++ SSETYP EST
Sbjct: 339 YGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLEST 398

Query: 362 WRVIQAVRQELSPFWPIFSDELPDN--------------LISKTVPLPEVLLSSSDSDDE 421
            RVIQAVR+ L  +WP     +  N               + + V   + L+++ D + E
Sbjct: 399 RRVIQAVRERLCTYWPSLDASMASNENLKNPSAERNSADALLREVEELKSLMAARDGELE 458

[Close]

BLAST of Sed0000594 vs. TAIR 10
Match: AT3G18520.1 (histone deacetylase 15 )

HSP 1 Score: 275.8 bits (704), Expect = 6.0e-74
Identity = 155/370 (41.89%), Postives = 213/370 (57.57%), Query Frame = 0


Query: 10  KFDGETGNSRRVGVLYDERMCKHHKPD--GDYHPENPSRIRVIWNKLQTARI-PQRCVVL 69
           K+ G +  +    V +DERM  H + +     HPE P R+R I   L TA + P RC+ +
Sbjct: 139 KYGGSSSATSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPI 198

Query: 70  NAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAAYLAAGS 129
           NA+E   + +  VH+ +HVD +   S   +       +   +  Y N+ S+ AA LAAG 
Sbjct: 199 NAREITKQELQMVHTSEHVDAVDTTSQLLY-------SYFTSDTYANEYSARAARLAAGL 258

Query: 130 VIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPDLGVKKI 189
             D+A  +  G + +  A+VRPPGHHA    AMGFCL NN AVAA          G KK+
Sbjct: 259 CADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALV----AQAAGAKKV 318

Query: 190 LIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGAGYNINV 249
           LIVDWDVHHGN TQ++F  +  VL+ S+HRHE G++YP T  G   ++G   G GY +NV
Sbjct: 319 LIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNV 378

Query: 250 PWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPYGYSIML 309
           PW     GD DY+  + H+++P+A  ++PD VI+SAGFDAA GDPLG C VTP GYS M 
Sbjct: 379 PWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMT 438

Query: 310 KKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNK-SSETYPFESTWRVIQA 369
           + L +L  GK ++ LEGGYNL SI++S  A  + LL  +  N+    T P  +  + +  
Sbjct: 439 QMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTVLD 495

Query: 370 VRQELSPFWP 376
           V      FWP
Sbjct: 499 VLNIQLEFWP 495

[Close]

BLAST of Sed0000594 vs. TAIR 10
Match: AT3G18520.2 (histone deacetylase 15 )

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-73
Identity = 164/426 (38.50%), Postives = 231/426 (54.23%), Query Frame = 0


Query: 10  KFDGETGNSRRVGVLYDERMCKHHKPD--GDYHPENPSRIRVIWNKLQTARI-PQRCVVL 69
           K+ G +  +    V +DERM  H + +     HPE P R+R I   L TA + P RC+ +
Sbjct: 139 KYGGSSSATSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPI 198

Query: 70  NAKEAEDKHIMAVHSKKHVDLIKNISSKEFDSQRDGIASKLNSIYFNKGSSEAAYLAAGS 129
           NA+E   + +  VH+ +HVD +   S   +       +   +  Y N+ S+ AA LAAG 
Sbjct: 199 NAREITKQELQMVHTSEHVDAVDTTSQLLY-------SYFTSDTYANEYSARAARLAAGL 258

Query: 130 VIDVAERVAKGDLDSAIAIVRPPGHHAEYDEAMGFCLFNNVAVAASFILNERPDLGVKKI 189
             D+A  +  G + +  A+VRPPGHHA    AMGFCL NN AVAA          G KK+
Sbjct: 259 CADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALV----AQAAGAKKV 318

Query: 190 LIVDWDVHHGNATQKMFWTDPHVLFFSVHRHEFGSYYPATEDGYYTKIGEGPGAGYNINV 249
           LIVDWDVHHGN TQ++F  +  VL+ S+HRHE G++YP T  G   ++G   G GY +NV
Sbjct: 319 LIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGT--GAADEVGSNGGEGYCVNV 378

Query: 250 PWENAHCGDADYLAVWDHILVPVAKEYNPDMVIVSAGFDAAVGDPLGGCCVTPYGYSIML 309
           PW     GD DY+  + H+++P+A  ++PD VI+SAGFDAA GDPLG C VTP GYS M 
Sbjct: 379 PWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMT 438

Query: 310 KKLMNLAQGKFVLALEGGYNLDSIASSMLACAEFLLDGSTMNK-SSETYPFESTWRVIQA 369
           + L +L  GK ++ LEGGYNL SI++S  A  + LL  +  N+    T P  +  + +  
Sbjct: 439 QMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTVLD 498

Query: 370 VRQELSPFWPIFSDELPDNLISKTVPLPEVLLSSSDSDDEASNARLKSL--EEVLESITL 429
           V      FWP  +      L      L E     SD  +  S + +  +  +E    ++L
Sbjct: 499 VLNIQLEFWPSLAISYSKLLSELEARLIENKSEKSDEKEGCSGSDMVEMGTKEAFVQLSL 551

The following BLAST results are available for this feature:

BLAST of Sed0000594 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878340.1	2.4e-221	87.39	histone deacetylase 5 [Benincasa hispida]	[more]
XP_022987953.1	3.4e-220	85.75	histone deacetylase 5 [Cucurbita maxima]	[more]
XP_004138195.1	1.7e-219	85.52	histone deacetylase 5 [Cucumis sativus] >KGN63723.1 hypothetical protein Csa_014...	[more]
XP_023516037.1	6.4e-219	85.29	histone deacetylase 5 [Cucurbita pepo subsp. pepo]	[more]
XP_008453265.1	3.2e-218	85.52	PREDICTED: histone deacetylase 5 [Cucumis melo]	[more]

BLAST of Sed0000594 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX28	1.3e-166	68.23	Histone deacetylase 5 OS=Arabidopsis thaliana OX=3702 GN=HDA5 PE=1 SV=1	[more]
Q8LRK8	4.6e-151	60.00	Histone deacetylase 18 OS=Arabidopsis thaliana OX=3702 GN=HDA18 PE=2 SV=1	[more]
Q9Z2V5	6.7e-78	45.40	Histone deacetylase 6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3	[more]
Q5A960	3.1e-75	39.10	Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=...	[more]
P56523	7.7e-74	41.76	Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]

BLAST of Sed0000594 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKV3	1.6e-220	85.75	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111485349 PE=4 SV=1	[more]
A0A0A0LPI7	8.2e-220	85.52	Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_1G013220 PE=4 SV=1	[more]
A0A5A7UWV4	1.5e-218	85.52	Histone deacetylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G...	[more]
A0A6J1E149	1.5e-218	85.06	Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111429854 PE=4 SV=1	[more]
A0A1S3BWL5	1.5e-218	85.52	Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103494038 PE=4 SV=1	[more]

BLAST of Sed0000594 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61060.1	9.4e-168	68.23	histone deacetylase 5	[more]
AT5G61060.2	5.1e-166	67.56	histone deacetylase 5	[more]
AT5G61070.1	3.2e-152	60.00	histone deacetylase of the RPD3/HDA1 superfamily 18	[more]
AT3G18520.1	6.0e-74	41.89	histone deacetylase 15	[more]
AT3G18520.2	2.3e-73	38.50	histone deacetylase 15	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase family	PRINTS	PR01270	HDASUPER	coord: 275..285 score: 47.2 coord: 148..171 score: 49.12
IPR023801	Histone deacetylase domain	PFAM	PF00850	Hist_deacetyl	coord: 40..338 e-value: 9.1E-91 score: 304.5
IPR037138	Histone deacetylase domain superfamily	GENE3D	3.40.800.20	Histone deacetylase domain	coord: 14..389 e-value: 2.6E-131 score: 440.3
None	No IPR available	PIRSR	PIRSR037913-1	PIRSR037913-1	coord: 19..334 e-value: 3.7E-39 score: 132.7
None	No IPR available	PIRSR	PIRSR037913-3	PIRSR037913-3	coord: 19..334 e-value: 3.7E-39 score: 132.7
None	No IPR available	PANTHER	PTHR45634:SF23	BNAA09G05590D PROTEIN	coord: 18..405
None	No IPR available	PANTHER	PTHR45634	HISTONE DEACETYLASE	coord: 18..405
IPR023696	Ureohydrolase domain superfamily	SUPERFAMILY	52768	Arginase/deacetylase	coord: 19..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000594.1	Sed0000594.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0070932	histone H3 deacetylation
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)