Sed0000443 (gene) Chayote v1

Overview


Name	Sed0000443
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG05: 44652353 .. 44654180 (+)
RNA-Seq Expression	Sed0000443
Synteny	Sed0000443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAATTATTTGGTTGAACAACAAATTTACAAAAAAGGTAAACAAGTATAAAATAAGTTTGGAAAGAATAGAGGCTAAATTGAGGTGGCAATAGGCACATGAAAAAATTGCAATGTGGTGGTCCGCATAAGATGAAAACTCAAGACCCTTAAATTCATAAACAGTGACGTGTCACTCACCCAAGGTCCCCGTCGACAAATCGGATGGAGGACGTAACCCTGATTCAAAACAAACAAACAAACAAACTACCCCATTAAACCCCCCCTTTCTTCTTCTTCGATCCAAAACCCTTTTTCTCTCTGCAACTGAACAAACCTTCACACTCCGCCATTGCAGCGCCTTACATGCCGATCTCCCCTTCTCCTTCCCCTTCCCCCTCCGCCGCCGCCGCCGTCAATTTCCCTCCGCCTTCTTCCAAGCTCCCGGTCGACTTCAGCCCTCCTCTAATCGCCATGGTCGTCGTCATCGCCGCCGCCTTTCTCCTTGTTACCTATTCGCGTCTCATCTCCCGCCATCTCTTCCCTCCGATCATCCAGACTCTTCGCCGTCACCGCCGTCTCTGGCGCCGTTGGCGCCGCCGCCGACGCCGTCCCCAATCTTACCTCCCGTCCTCCTCCTCCGGCGGCGATTTGGACTCTCTCCCTTACGATTCGCCTTTCTTCGATCCTACCGATGGATTTTTCTCGTCCTACGGTCTCGACGAGTCCGTCATCAAGACGATTCCGCTCACCGTCTACACCGCCAAGAATCGCGACCGCGACTGCGCCGTTTGTCTTCTGGAATTCGAACACGACGATTACGTCCGTACGCTTCCGATCTGTTCCCACGCGTTTCATGTCGATTGTATAGACGTTTGGCTTCGATCGCACGCCAACTGTCCGCTCTGTCGCGCGGTTGTTTTCCGGCCGGAATCCCCGTTCACGCCGCTCATGGCCGCGAGGATCCGGCCGAGCCTCGACGATACGATCTTACGGAGCATCGTGTTGGAGCCGCTCGCGGTAGGTTTTATACCTAATCGCGATTCGGAGTCGGAGATCACGCCGTGCGTTGATGAGCCGAGGAATAGAAATTCGGCGGAGGATCGTAGAGATTTCTTGTTGAAGCGATCGTATTCGTTTGGATTCGAACGGAGCTTAGCGTCGGAGAGGATGATTCTGGAGCCGGCGACGGCGTCGCCGTGGAGGTACCGGCGGGGAAACTTCTGGAGCAAACGGCCGTCGCCGTCGCCGTTTGGATCTGTAGCGAAGGCGAGAGTGTTCTCGTTCCGATACTACAGAGGAATGAAGTCGCCGTTCTTCAGACGGAGAGGAGGATTCTTTCCGTTATCGGAATCGAGCTGGAGATTCTCCAATGGCGTCGGCGGAGGCTCGTCTAGACGTAGCAAGTCGATGACGAGTCCAATGTTTCTCCAATCATCGGCGGCCAACGGCGCGGCGGCGTTCTCGTCGAGCCGGCTGAGGTGCGGAGATCCCGAGGCGTTACTTTCACCGGAGAGATTCAACAGAAGATGAGAGAGAAAGAACGAATAGAAGAAAGTAAAAAACGGAGGACACGTGTGCGGCCAGGATGTCTTGGAAAATGGACGGTGGGAGATGGGGCGGAGGGAGGAGAGAAATGCGGCGGCGGAGGCGGTGGAGAGAGAAAGGGGTGGAAGAGAGAAATGGGGGTTTTAATGAGGACTGTCTGGCAATTTTGTAGAAGTCATTAATGGGAGGTGGGGAGAAGCATTTAATGAAAAATTGACGAGAGAGAAATACGTATTTTTTTATTTAATTTTTTTCTCTCACTTTAATCGATGAACCACCGGTCATATGAGGTTAAATCCGGA

mRNA sequence

GTGAATTATTTGGTTGAACAACAAATTTACAAAAAAGGTAAACAAGTATAAAATAAGTTTGGAAAGAATAGAGGCTAAATTGAGGTGGCAATAGGCACATGAAAAAATTGCAATGTGGTGGTCCGCATAAGATGAAAACTCAAGACCCTTAAATTCATAAACAGTGACGTGTCACTCACCCAAGGTCCCCGTCGACAAATCGGATGGAGGACGTAACCCTGATTCAAAACAAACAAACAAACAAACTACCCCATTAAACCCCCCCTTTCTTCTTCTTCGATCCAAAACCCTTTTTCTCTCTGCAACTGAACAAACCTTCACACTCCGCCATTGCAGCGCCTTACATGCCGATCTCCCCTTCTCCTTCCCCTTCCCCCTCCGCCGCCGCCGCCGTCAATTTCCCTCCGCCTTCTTCCAAGCTCCCGGTCGACTTCAGCCCTCCTCTAATCGCCATGGTCGTCGTCATCGCCGCCGCCTTTCTCCTTGTTACCTATTCGCGTCTCATCTCCCGCCATCTCTTCCCTCCGATCATCCAGACTCTTCGCCGTCACCGCCGTCTCTGGCGCCGTTGGCGCCGCCGCCGACGCCGTCCCCAATCTTACCTCCCGTCCTCCTCCTCCGGCGGCGATTTGGACTCTCTCCCTTACGATTCGCCTTTCTTCGATCCTACCGATGGATTTTTCTCGTCCTACGGTCTCGACGAGTCCGTCATCAAGACGATTCCGCTCACCGTCTACACCGCCAAGAATCGCGACCGCGACTGCGCCGTTTGTCTTCTGGAATTCGAACACGACGATTACGTCCGTACGCTTCCGATCTGTTCCCACGCGTTTCATGTCGATTGTATAGACGTTTGGCTTCGATCGCACGCCAACTGTCCGCTCTGTCGCGCGGTTGTTTTCCGGCCGGAATCCCCGTTCACGCCGCTCATGGCCGCGAGGATCCGGCCGAGCCTCGACGATACGATCTTACGGAGCATCGTGTTGGAGCCGCTCGCGGTAGGTTTTATACCTAATCGCGATTCGGAGTCGGAGATCACGCCGTGCGTTGATGAGCCGAGGAATAGAAATTCGGCGGAGGATCGTAGAGATTTCTTGTTGAAGCGATCGTATTCGTTTGGATTCGAACGGAGCTTAGCGTCGGAGAGGATGATTCTGGAGCCGGCGACGGCGTCGCCGTGGAGGTACCGGCGGGGAAACTTCTGGAGCAAACGGCCGTCGCCGTCGCCGTTTGGATCTGTAGCGAAGGCGAGAGTGTTCTCGTTCCGATACTACAGAGGAATGAAGTCGCCGTTCTTCAGACGGAGAGGAGGATTCTTTCCGTTATCGGAATCGAGCTGGAGATTCTCCAATGGCGTCGGCGGAGGCTCGTCTAGACGTAGCAAGTCGATGACGAGTCCAATGTTTCTCCAATCATCGGCGGCCAACGGCGCGGCGGCGTTCTCGTCGAGCCGGCTGAGGTGCGGAGATCCCGAGGCGTTACTTTCACCGGAGAGATTCAACAGAAGATGAGAGAGAAAGAACGAATAGAAGAAAGTAAAAAACGGAGGACACGTGTGCGGCCAGGATGTCTTGGAAAATGGACGGTGGGAGATGGGGCGGAGGGAGGAGAGAAATGCGGCGGCGGAGGCGGTGGAGAGAGAAAGGGGTGGAAGAGAGAAATGGGGGTTTTAATGAGGACTGTCTGGCAATTTTGTAGAAGTCATTAATGGGAGGTGGGGAGAAGCATTTAATGAAAAATTGACGAGAGAGAAATACGTATTTTTTTATTTAATTTTTTTCTCTCACTTTAATCGATGAACCACCGGTCATATGAGGTTAAATCCGGA

Coding sequence (CDS)

ATGCCGATCTCCCCTTCTCCTTCCCCTTCCCCCTCCGCCGCCGCCGCCGTCAATTTCCCTCCGCCTTCTTCCAAGCTCCCGGTCGACTTCAGCCCTCCTCTAATCGCCATGGTCGTCGTCATCGCCGCCGCCTTTCTCCTTGTTACCTATTCGCGTCTCATCTCCCGCCATCTCTTCCCTCCGATCATCCAGACTCTTCGCCGTCACCGCCGTCTCTGGCGCCGTTGGCGCCGCCGCCGACGCCGTCCCCAATCTTACCTCCCGTCCTCCTCCTCCGGCGGCGATTTGGACTCTCTCCCTTACGATTCGCCTTTCTTCGATCCTACCGATGGATTTTTCTCGTCCTACGGTCTCGACGAGTCCGTCATCAAGACGATTCCGCTCACCGTCTACACCGCCAAGAATCGCGACCGCGACTGCGCCGTTTGTCTTCTGGAATTCGAACACGACGATTACGTCCGTACGCTTCCGATCTGTTCCCACGCGTTTCATGTCGATTGTATAGACGTTTGGCTTCGATCGCACGCCAACTGTCCGCTCTGTCGCGCGGTTGTTTTCCGGCCGGAATCCCCGTTCACGCCGCTCATGGCCGCGAGGATCCGGCCGAGCCTCGACGATACGATCTTACGGAGCATCGTGTTGGAGCCGCTCGCGGTAGGTTTTATACCTAATCGCGATTCGGAGTCGGAGATCACGCCGTGCGTTGATGAGCCGAGGAATAGAAATTCGGCGGAGGATCGTAGAGATTTCTTGTTGAAGCGATCGTATTCGTTTGGATTCGAACGGAGCTTAGCGTCGGAGAGGATGATTCTGGAGCCGGCGACGGCGTCGCCGTGGAGGTACCGGCGGGGAAACTTCTGGAGCAAACGGCCGTCGCCGTCGCCGTTTGGATCTGTAGCGAAGGCGAGAGTGTTCTCGTTCCGATACTACAGAGGAATGAAGTCGCCGTTCTTCAGACGGAGAGGAGGATTCTTTCCGTTATCGGAATCGAGCTGGAGATTCTCCAATGGCGTCGGCGGAGGCTCGTCTAGACGTAGCAAGTCGATGACGAGTCCAATGTTTCTCCAATCATCGGCGGCCAACGGCGCGGCGGCGTTCTCGTCGAGCCGGCTGAGGTGCGGAGATCCCGAGGCGTTACTTTCACCGGAGAGATTCAACAGAAGATGA

Protein sequence

MPISPSPSPSPSAAAAVNFPPPSSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGFFSSYGLDESVIKTIPLTVYTAKNRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDSESEITPCVDEPRNRNSAEDRRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLQSSAANGAAAFSSSRLRCGDPEALLSPERFNRR

Homology

[Close]

BLAST of Sed0000443 vs. NCBI nr
Match: XP_038902895.1 (RING-H2 finger protein ATL65 [Benincasa hispida])

HSP 1 Score: 652.5 bits (1682), Expect = 2.3e-183
Identity = 347/405 (85.68%), Postives = 362/405 (89.38%), Query Frame = 0


Query: 1   MPISPSPSPSPS---AAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRL 60
           MP +PSPSPSPS   AA+A NFPPPSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRL
Sbjct: 1   MPTAPSPSPSPSPSTAASAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 60

Query: 61  ISRHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF- 120
           ISRHL PPI+  LR HRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+PTDGF 
Sbjct: 61  ISRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEPTDGFH 120

Query: 121 -FSSYGLDESVIKTIPLTVYTAKNRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDVW 180
            FS YGLDESVIKTIPL+VYTAK+RDR+CAVCLLEFE DDYVRTLPICSHAFHVDCIDVW
Sbjct: 121 VFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVW 180

Query: 181 LRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS---- 240
           LRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTILRSIVLEPL  G IPNRDS    
Sbjct: 181 LRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGTIPNRDSYHAT 240

Query: 241 ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRG 300
           ESEITPCVDEPRN NS +D+   RDFLLKRSYSFGFERSLASERMILEPAT SPWRYRRG
Sbjct: 241 ESEITPCVDEPRNSNSVDDQINGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRG 300

Query: 301 NFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR 360
           +FW KR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR
Sbjct: 301 SFWMKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR 360

Query: 361 RSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           RSKSMTSPMFL+SS    GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 RSKSMTSPMFLRSSVTGGGAATFSSSRLRCGDPEALLSPERFNRR 402

[Close]

BLAST of Sed0000443 vs. NCBI nr
Match: XP_022943929.1 (RING-H2 finger protein ATL65 [Cucurbita moschata] >KAG7010952.1 RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 642.1 bits (1655), Expect = 3.1e-180
Identity = 346/407 (85.01%), Postives = 364/407 (89.43%), Query Frame = 0


Query: 4   SPSPSPSP----SAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRLIS 63
           SPSPSPSP    SAAAAVNFP PSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRLIS
Sbjct: 10  SPSPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 69

Query: 64  RHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF--F 123
           RH+ PPI+  +RRHRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+ TDGF  F
Sbjct: 70  RHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEHTDGFHVF 129

Query: 124 SSYGLDESVIKTIPLTVYTAK----NRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCID 183
           S YGLDES+IKTIPL+VYTAK    +RDR+CAVCLLEFE DDYVRTLPICSHAFHVDCID
Sbjct: 130 SPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 189

Query: 184 VWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS-- 243
           VWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLD+TIL+SIVLEPLA G IPNRDS  
Sbjct: 190 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYH 249

Query: 244 --ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWRYR 303
             ESEITPCVDEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPATASPWRYR
Sbjct: 250 ATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYR 309

Query: 304 RGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 363
           RG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS
Sbjct: 310 RGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 369

Query: 364 SRRSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           SRRSKSMTSPMFL+SS  + GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 370 SRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Sed0000443 vs. NCBI nr
Match: XP_023511773.1 (RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.7 bits (1654), Expect = 4.0e-180
Identity = 345/406 (84.98%), Postives = 364/406 (89.66%), Query Frame = 0


Query: 4   SPSPSPSPSA---AAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRLISR 63
           SPSPSPS S+   AAAVNFPPPSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRLISR
Sbjct: 12  SPSPSPSTSSSSYAAAVNFPPPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISR 71

Query: 64  HLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF--FS 123
           H+ PPI+  +RRHRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+ TDG+  FS
Sbjct: 72  HVIPPILLLIRRHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEHTDGYHVFS 131

Query: 124 SYGLDESVIKTIPLTVYTAK----NRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDV 183
            YGLDES+IKTIPL+VYTAK    +RDR+CAVCLLEFE DDYVRTLPICSHAFHVDCIDV
Sbjct: 132 PYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 191

Query: 184 WLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS--- 243
           WLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTIL+SIVLEPLA G IPNRDS   
Sbjct: 192 WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGPIPNRDSYHA 251

Query: 244 -ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWRYRR 303
            ESEITPCVDEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPATASPWRYRR
Sbjct: 252 TESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRR 311

Query: 304 GNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS 363
           G+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS
Sbjct: 312 GSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS 371

Query: 364 RRSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           RRSKSMTSPMFL+SS  + GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 372 RRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414

[Close]

BLAST of Sed0000443 vs. NCBI nr
Match: XP_022986546.1 (RING-H2 finger protein ATL65 [Cucurbita maxima])

HSP 1 Score: 640.6 bits (1651), Expect = 8.9e-180
Identity = 346/409 (84.60%), Postives = 364/409 (89.00%), Query Frame = 0


Query: 4   SPSPSPSP------SAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRL 63
           SPSPSPSP      S+AAAVNFPPPSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRL
Sbjct: 8   SPSPSPSPSTSSSSSSAAAVNFPPPSSLLPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 67

Query: 64  ISRHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF- 123
           ISRH+ PPI+  +RRHRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+ TDGF 
Sbjct: 68  ISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEHTDGFH 127

Query: 124 -FSSYGLDESVIKTIPLTVYTAK----NRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDC 183
            FS YGLDES+IKTIPL+VYTAK    +RDR+CAVCLLEFE DDYVRTLPICSHAFHVDC
Sbjct: 128 VFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDC 187

Query: 184 IDVWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS 243
           IDVWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTIL+SIVLEPLA G IPNRDS
Sbjct: 188 IDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGPIPNRDS 247

Query: 244 ----ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWR 303
               ESEITP VDEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPATASPWR
Sbjct: 248 YNATESEITPYVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWR 307

Query: 304 YRRGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG 363
           YRRG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG
Sbjct: 308 YRRGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG 367

Query: 364 GSSRRSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           GSSRRSKSMTSPMFL+SS  + GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 368 GSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Sed0000443 vs. NCBI nr
Match: KAG6571140.1 (RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 638.6 bits (1646), Expect = 3.4e-179
Identity = 344/407 (84.52%), Postives = 362/407 (88.94%), Query Frame = 0


Query: 4   SPSPSPSP----SAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRLIS 63
           SPSPSPSP    S AA VNFP PSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRLIS
Sbjct: 10  SPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 69

Query: 64  RHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF--F 123
           RH+ PPI+  +RRHRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+ TDGF  F
Sbjct: 70  RHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEHTDGFHVF 129

Query: 124 SSYGLDESVIKTIPLTVYTAK----NRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCID 183
           S YGLDES+IKTIPL+VYTAK    +RDR+CAVCLLEFE DDYVRTLPICSHAFHVDCID
Sbjct: 130 SPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 189

Query: 184 VWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS-- 243
           VWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLD+TIL+SIVLEPLA G IPNRDS  
Sbjct: 190 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYH 249

Query: 244 --ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWRYR 303
             ESEITPCVDEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPATASPWRYR
Sbjct: 250 ATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYR 309

Query: 304 RGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 363
           RG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS
Sbjct: 310 RGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 369

Query: 364 SRRSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           SRRSKSMTSPMFL+SS  + GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 370 SRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Sed0000443 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 329.7 bits (844), Expect = 4.4e-89
Identity = 219/420 (52.14%), Postives = 258/420 (61.43%), Query Frame = 0


Query: 6   SPSPSPSAAAAVNFPPPSSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQT 65
           SPSPSPS+  +      SS  P++FSPPLIAMVVV+AAAFL VTYSRLISR    P+   
Sbjct: 14  SPSPSPSSGISEEILSRSSDPPLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLF-- 73

Query: 66  LRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF----FSSYGLDES 125
                R +RRWR RRRR      +SS+      L   SPF  P D F    +S YGLD+S
Sbjct: 74  -----RRFRRWRCRRRRLLHLSSASSASTSSSDLRSFSPF--PFDSFHYSSYSPYGLDDS 133

Query: 126 VIKTIPLTVY-------------TAKNRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCI 185
           VIKT+PL +Y             T+    RDCAVCLLEFE  DYVRTLP+C HAFH++CI
Sbjct: 134 VIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECI 193

Query: 186 DVWLRSHANCPLCR------AVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFI 245
           D WLRSH NCPLCR      A V  P SPF PLMA RIRPSLDD    +I++        
Sbjct: 194 DEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRG---EIT 253

Query: 246 PNRD----------SESEITPCVDEPRNRNSAEDRRDFLLKRSYSFGFERSLASERMILE 305
           P+R           ++ EI   V+E   ++S    R   LKRSYSF  ER   SER+ +E
Sbjct: 254 PSRSNWNTIAADTTNDQEIRASVEE---QSSPAISRFRELKRSYSFECERESESERVTME 313

Query: 306 PATASPWRYRRGNFWSKRPSPSPFGS-VAKARVFSFRYYRGMKSPFFRRR---GGFFPLS 365
           PAT SPWRYRR   W+KR   SPFG+ ++K+RVFSFRYYR  KSPFFRRR   G F+P+S
Sbjct: 314 PATVSPWRYRRST-WNKR--QSPFGNLISKSRVFSFRYYRSTKSPFFRRRSSAGVFYPIS 373

Query: 366 ESSWRFSNGVGGGSSRRSKSMTSPMFLQSSAANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           E          G SSRR+KSMTSPMF ++      A  SSSRLRCGDPEALLSPER+ RR
Sbjct: 374 ERI-----PATGSSSRRTKSMTSPMFFRT------APHSSSRLRCGDPEALLSPERWRRR 404

[Close]

BLAST of Sed0000443 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 7.4e-20
Identity = 72/182 (39.56%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 17  VNFPPPSS--------KLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRR 76
           V FPPP S            DFSP LIA++ ++A+AF+LV+Y  LIS++         RR
Sbjct: 35  VIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCH------RRR 94

Query: 77  HRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGFFSSYGLDESVIKTIPL 136
           H           R    Y    ++  + +     +P  + T G     GLDES+IK+I  
Sbjct: 95  HNSSSTSAAAINRISSDYTWQGTNNNNNNGA--TNP--NQTIGGGGGDGLDESLIKSI-- 154

Query: 137 TVYTAKNRD-----RDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRA 186
           TVY  +  D      DC+VCL EF+ ++ +R LP C+HAFHV CID WL+SH+NCPLCRA
Sbjct: 155 TVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRA 204

[Close]

BLAST of Sed0000443 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-19
Identity = 71/188 (37.77%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 19  FPPP---------SSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRRH 78
           FPPP         SS     FSP LIA++ ++ +A +LV+Y  LIS++          RH
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKY--------CHRH 93

Query: 79  RRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGFFSS-YGLDESVIKTIPL 138
            +                  +SS   L+       FF  T    ++  GL+ES+IK+I  
Sbjct: 94  HQ------------------TSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSI-- 153

Query: 139 TVYTAKNRD-----RDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRA 192
           TVY  K+ D      DC+VCL EFE ++ +R LP C+HAFH+ CID WL+SH+NCPLCRA
Sbjct: 154 TVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 193

[Close]

BLAST of Sed0000443 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.7e-19
Identity = 70/204 (34.31%), Postives = 98/204 (48.04%), Query Frame = 0


Query: 34  LIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSG 93
           ++A V+++  A +L+      +R LF              R+ RR RRR  ++L S ++ 
Sbjct: 29  MLASVIILFVAVILILCFHSYARWLFR-------------RQNRRIRRRISAHLRSLAAA 88

Query: 94  GDLDSLPYDSPFFDPTDGFFSSYGLDESVIKTIPLTVYTAKNRD---RDCAVCLLEFEHD 153
                        DPT    S   LD +V++ IP+ VY+ K  +    +C+VCL EFE D
Sbjct: 89  R------------DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEED 148

Query: 154 DYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFT-PLMAARIRPSLDDTIL 213
           D  R LP C H FHVDCID W RS ++CPLCRA V +P  P T P   A + PS+     
Sbjct: 149 DEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV-QPAQPVTEPEPVAAVFPSVKP--- 199

Query: 214 RSIVLEPLAVGFIPNRDSESEITP 234
               +E    G   + D     TP
Sbjct: 209 ----IEDTEAGSSSSSDESESSTP 199

[Close]

BLAST of Sed0000443 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.5e-16
Identity = 87/295 (29.49%), Postives = 131/295 (44.41%), Query Frame = 0


Query: 3   ISPSPSPSPSAAAAVNFPPPSSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPI 62
           + P P P PS        P +S    +F    IA++ ++A AFLLV+Y      ++F  +
Sbjct: 14  VFPPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSY------YIF--V 73

Query: 63  IQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGFFSSYGLDESV 122
           I+      ++    RRRR   Q+ L   S        P++            + GLDES 
Sbjct: 74  IKCCLNWHQIDIFRRRRRSSDQNPLMIYS--------PHE-----------VNRGLDESA 133

Query: 123 IKTIPLTVYTAKNRD------------RDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDV 182
           I+ IP  V+  K RD            ++C+VCL EF+ D+ +R +P C H FH+DCID+
Sbjct: 134 IRAIP--VFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDI 193

Query: 183 WLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDSESE 242
           WL+ +ANCPLCR  V    S    L++A   P  +    R+  LEP   G +   D +  
Sbjct: 194 WLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEP---GLVLGGDDDFV 253

Query: 243 ITPCVDEPRNRNSAEDRRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGN 286
           +        N   +    DFL ++      E S  +      P + SP   + GN
Sbjct: 254 VIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGN-----SPKSVSPLPIKFGN 271

[Close]

BLAST of Sed0000443 vs. ExPASy TrEMBL
Match: A0A6J1FVL7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448502 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.5e-180
Identity = 346/407 (85.01%), Postives = 364/407 (89.43%), Query Frame = 0


Query: 4   SPSPSPSP----SAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRLIS 63
           SPSPSPSP    SAAAAVNFP PSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRLIS
Sbjct: 10  SPSPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 69

Query: 64  RHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF--F 123
           RH+ PPI+  +RRHRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+ TDGF  F
Sbjct: 70  RHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEHTDGFHVF 129

Query: 124 SSYGLDESVIKTIPLTVYTAK----NRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCID 183
           S YGLDES+IKTIPL+VYTAK    +RDR+CAVCLLEFE DDYVRTLPICSHAFHVDCID
Sbjct: 130 SPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 189

Query: 184 VWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS-- 243
           VWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLD+TIL+SIVLEPLA G IPNRDS  
Sbjct: 190 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYH 249

Query: 244 --ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWRYR 303
             ESEITPCVDEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPATASPWRYR
Sbjct: 250 ATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYR 309

Query: 304 RGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 363
           RG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS
Sbjct: 310 RGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 369

Query: 364 SRRSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           SRRSKSMTSPMFL+SS  + GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 370 SRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Sed0000443 vs. ExPASy TrEMBL
Match: A0A6J1JBG1 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111484253 PE=3 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.3e-180
Identity = 346/409 (84.60%), Postives = 364/409 (89.00%), Query Frame = 0


Query: 4   SPSPSPSP------SAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSRL 63
           SPSPSPSP      S+AAAVNFPPPSS    KLPVDFSPPLIAMVVVIA AFL+VTYSRL
Sbjct: 8   SPSPSPSPSTSSSSSSAAAVNFPPPSSLLPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 67

Query: 64  ISRHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF- 123
           ISRH+ PPI+  +RRHRR WRRWRRRRRR +SYLP SSSGGDLDSLPYDSPFF+ TDGF 
Sbjct: 68  ISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP-SSSGGDLDSLPYDSPFFEHTDGFH 127

Query: 124 -FSSYGLDESVIKTIPLTVYTAK----NRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDC 183
            FS YGLDES+IKTIPL+VYTAK    +RDR+CAVCLLEFE DDYVRTLPICSHAFHVDC
Sbjct: 128 VFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDC 187

Query: 184 IDVWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFIPNRDS 243
           IDVWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTIL+SIVLEPLA G IPNRDS
Sbjct: 188 IDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGPIPNRDS 247

Query: 244 ----ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWR 303
               ESEITP VDEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPATASPWR
Sbjct: 248 YNATESEITPYVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWR 307

Query: 304 YRRGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG 363
           YRRG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG
Sbjct: 308 YRRGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG 367

Query: 364 GSSRRSKSMTSPMFLQSS-AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           GSSRRSKSMTSPMFL+SS  + GAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 368 GSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Sed0000443 vs. ExPASy TrEMBL
Match: A0A1S4E2C5 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498427 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.8e-179
Identity = 348/412 (84.47%), Postives = 362/412 (87.86%), Query Frame = 0


Query: 1   MPISPSP----SPSPSAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIAAAFLLVTYSR 60
           MP SPSP    SPS SAAAA NFPPPSS    KLPVDFSPPLIAMVVVIA AFL+VTYSR
Sbjct: 1   MPTSPSPSPSLSPSTSAAAAANFPPPSSLQSAKLPVDFSPPLIAMVVVIATAFLIVTYSR 60

Query: 61  LISRHLFPPIIQTLRRHRRLWRRWRRRRRR-PQSYLPSSSSGGDLDSLPYDSPFFDP-TD 120
           LISRHL PPI+  LR HRR WRRWRRRRRR  +SY+P SSSGGDLDSLPYDSPFF+P TD
Sbjct: 61  LISRHLVPPILHLLRLHRRRWRRWRRRRRRAARSYIP-SSSGGDLDSLPYDSPFFEPTTD 120

Query: 121 GF--FSSYGLDESVIKTIPLTVYTAKNRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCI 180
            F  FS YGLDESVIKTIPL+VYTAK+RDR+CAVCLLEFE DDYVRTLPICSHAFHVDCI
Sbjct: 121 AFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCI 180

Query: 181 DVWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVG-FIPNRDS 240
           DVWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTILRSIVLEPLA G  IPNRDS
Sbjct: 181 DVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLAEGPLIPNRDS 240

Query: 241 ----ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMILEPATASPWR 300
               ESEITPC+DEPRN NS ED+   RDFLLKRSYSFGFERSLASERMILEPAT SPWR
Sbjct: 241 YHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPATTSPWR 300

Query: 301 YRRGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG 360
           YRRG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG
Sbjct: 301 YRRGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGG 360

Query: 361 GSSRRSKSMTSPMFLQSS----AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           GSSRRSKSMTSPMFL+SS       G AAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 GSSRRSKSMTSPMFLRSSVTGGGGGGGAAFSSSRLRCGDPEALLSPERFNRR 409

[Close]

BLAST of Sed0000443 vs. ExPASy TrEMBL
Match: A0A0A0LIL3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE=3 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.1e-178
Identity = 347/420 (82.62%), Postives = 363/420 (86.43%), Query Frame = 0


Query: 1   MPISPSPSPSP--------------SAAAAVNFPPPSS----KLPVDFSPPLIAMVVVIA 60
           MP SPSPSPSP              S+AAA NFPPPSS    KLPVDFSPPLIAMVVVIA
Sbjct: 1   MPTSPSPSPSPSPSPSPSTSSSSSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIA 60

Query: 61  AAFLLVTYSRLISRHLFPPIIQTLRRHRRLWRRWRRRRR-RPQSYLPSSSSGGDLDSLPY 120
            AFL+VTYSRLISRHL PPI+  LR HRR WRRWRRRRR   +SY+P SSSGGDLDSLPY
Sbjct: 61  TAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIP-SSSGGDLDSLPY 120

Query: 121 DSPFFDP-TDGF--FSSYGLDESVIKTIPLTVYTAKNRDRDCAVCLLEFEHDDYVRTLPI 180
           DSPFF+P TD F  FS YGLDESVIKTIPL+VYTAK+RDR+CAVCLLEFE DDYVRTLPI
Sbjct: 121 DSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPI 180

Query: 181 CSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLA 240
           CSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTILRSI+LEPLA
Sbjct: 181 CSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLA 240

Query: 241 VG-FIPNRDS----ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSLASERMI 300
            G  IPNRDS    ESEITPC+DEPRN NS ED+   RDFLLKRSYSFGFERSLASERMI
Sbjct: 241 EGPPIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMI 300

Query: 301 LEPATASPWRYRRGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGFFPLSES 360
           LEPAT SPWRYRRG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGFFPLSES
Sbjct: 301 LEPATTSPWRYRRGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSES 360

Query: 361 SWRFSNGVGGGSSRRSKSMTSPMFLQSS--AANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           SWRFSNGVGGGSSRRSKSMTSPMFL+SS     GAAAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 SWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 417

[Close]

BLAST of Sed0000443 vs. ExPASy TrEMBL
Match: A0A5A7TSC8 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005120 PE=3 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.5e-166
Identity = 315/367 (85.83%), Postives = 329/367 (89.65%), Query Frame = 0


Query: 37  MVVVIAAAFLLVTYSRLISRHLFPPIIQTLRRHRRLWRRWRRRRRR-PQSYLPSSSSGGD 96
           MVVVIA AFL+VTYSRLISRHL PPI+  LR HRR WRRWRRRRRR  +SY+P SSSGGD
Sbjct: 1   MVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRRAARSYIP-SSSGGD 60

Query: 97  LDSLPYDSPFFDP-TDGF--FSSYGLDESVIKTIPLTVYTAKNRDRDCAVCLLEFEHDDY 156
           LDSLPYDSPFF+P TD F  FS YGLDESVIKTIPL+VYTAK+RDR+CAVCLLEFE DDY
Sbjct: 61  LDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDY 120

Query: 157 VRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPLMAARIRPSLDDTILRSI 216
           VRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP+MAARIRPSLDDTILRSI
Sbjct: 121 VRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSI 180

Query: 217 VLEPLAVG-FIPNRDS----ESEITPCVDEPRNRNSAEDR---RDFLLKRSYSFGFERSL 276
           VLEPLA G  IPNRDS    ESEITPC+DEPRN NS ED+   RDFLLKRSYSFGFERSL
Sbjct: 181 VLEPLAEGPLIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSL 240

Query: 277 ASERMILEPATASPWRYRRGNFWSKRPSPSPFGSVAKARVFSFRYYRGMKSPFFRRRGGF 336
           ASERMILEPAT SPWRYRRG+FWSKR  PSPFGS+ KARVFSFRYYRGMKSPFFRRRGGF
Sbjct: 241 ASERMILEPATTSPWRYRRGSFWSKR--PSPFGSLPKARVFSFRYYRGMKSPFFRRRGGF 300

Query: 337 FPLSESSWRFSNGVGGGSSRRSKSMTSPMFLQSS---AANGAAAFSSSRLRCGDPEALLS 389
           FPLSESSWRFSNGVGGGSSRRSKSMTSPMFL+SS      G AAFSSSRLRCGDPEALLS
Sbjct: 301 FPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGGGAAFSSSRLRCGDPEALLS 360

[Close]

BLAST of Sed0000443 vs. TAIR 10
Match: AT3G18930.1 (RING/U-box superfamily protein )

HSP 1 Score: 329.7 bits (844), Expect = 3.1e-90
Identity = 219/420 (52.14%), Postives = 258/420 (61.43%), Query Frame = 0


Query: 6   SPSPSPSAAAAVNFPPPSSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQT 65
           SPSPSPS+  +      SS  P++FSPPLIAMVVV+AAAFL VTYSRLISR    P+   
Sbjct: 14  SPSPSPSSGISEEILSRSSDPPLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLF-- 73

Query: 66  LRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF----FSSYGLDES 125
                R +RRWR RRRR      +SS+      L   SPF  P D F    +S YGLD+S
Sbjct: 74  -----RRFRRWRCRRRRLLHLSSASSASTSSSDLRSFSPF--PFDSFHYSSYSPYGLDDS 133

Query: 126 VIKTIPLTVY-------------TAKNRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCI 185
           VIKT+PL +Y             T+    RDCAVCLLEFE  DYVRTLP+C HAFH++CI
Sbjct: 134 VIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECI 193

Query: 186 DVWLRSHANCPLCR------AVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFI 245
           D WLRSH NCPLCR      A V  P SPF PLMA RIRPSLDD    +I++        
Sbjct: 194 DEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRG---EIT 253

Query: 246 PNRD----------SESEITPCVDEPRNRNSAEDRRDFLLKRSYSFGFERSLASERMILE 305
           P+R           ++ EI   V+E   ++S    R   LKRSYSF  ER   SER+ +E
Sbjct: 254 PSRSNWNTIAADTTNDQEIRASVEE---QSSPAISRFRELKRSYSFECERESESERVTME 313

Query: 306 PATASPWRYRRGNFWSKRPSPSPFGS-VAKARVFSFRYYRGMKSPFFRRR---GGFFPLS 365
           PAT SPWRYRR   W+KR   SPFG+ ++K+RVFSFRYYR  KSPFFRRR   G F+P+S
Sbjct: 314 PATVSPWRYRRST-WNKR--QSPFGNLISKSRVFSFRYYRSTKSPFFRRRSSAGVFYPIS 373

Query: 366 ESSWRFSNGVGGGSSRRSKSMTSPMFLQSSAANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           E          G SSRR+KSMTSPMF ++      A  SSSRLRCGDPEALLSPER+ RR
Sbjct: 374 ERI-----PATGSSSRRTKSMTSPMFFRT------APHSSSRLRCGDPEALLSPERWRRR 404

[Close]

BLAST of Sed0000443 vs. TAIR 10
Match: AT3G18930.2 (RING/U-box superfamily protein )

HSP 1 Score: 329.7 bits (844), Expect = 3.1e-90
Identity = 219/420 (52.14%), Postives = 258/420 (61.43%), Query Frame = 0


Query: 6   SPSPSPSAAAAVNFPPPSSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQT 65
           SPSPSPS+  +      SS  P++FSPPLIAMVVV+AAAFL VTYSRLISR    P+   
Sbjct: 14  SPSPSPSSGISEEILSRSSDPPLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLF-- 73

Query: 66  LRRHRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGF----FSSYGLDES 125
                R +RRWR RRRR      +SS+      L   SPF  P D F    +S YGLD+S
Sbjct: 74  -----RRFRRWRCRRRRLLHLSSASSASTSSSDLRSFSPF--PFDSFHYSSYSPYGLDDS 133

Query: 126 VIKTIPLTVY-------------TAKNRDRDCAVCLLEFEHDDYVRTLPICSHAFHVDCI 185
           VIKT+PL +Y             T+    RDCAVCLLEFE  DYVRTLP+C HAFH++CI
Sbjct: 134 VIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECI 193

Query: 186 DVWLRSHANCPLCR------AVVFRPESPFTPLMAARIRPSLDDTILRSIVLEPLAVGFI 245
           D WLRSH NCPLCR      A V  P SPF PLMA RIRPSLDD    +I++        
Sbjct: 194 DEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRG---EIT 253

Query: 246 PNRD----------SESEITPCVDEPRNRNSAEDRRDFLLKRSYSFGFERSLASERMILE 305
           P+R           ++ EI   V+E   ++S    R   LKRSYSF  ER   SER+ +E
Sbjct: 254 PSRSNWNTIAADTTNDQEIRASVEE---QSSPAISRFRELKRSYSFECERESESERVTME 313

Query: 306 PATASPWRYRRGNFWSKRPSPSPFGS-VAKARVFSFRYYRGMKSPFFRRR---GGFFPLS 365
           PAT SPWRYRR   W+KR   SPFG+ ++K+RVFSFRYYR  KSPFFRRR   G F+P+S
Sbjct: 314 PATVSPWRYRRST-WNKR--QSPFGNLISKSRVFSFRYYRSTKSPFFRRRSSAGVFYPIS 373

Query: 366 ESSWRFSNGVGGGSSRRSKSMTSPMFLQSSAANGAAAFSSSRLRCGDPEALLSPERFNRR 389
           E          G SSRR+KSMTSPMF ++      A  SSSRLRCGDPEALLSPER+ RR
Sbjct: 374 ERI-----PATGSSSRRTKSMTSPMFFRT------APHSSSRLRCGDPEALLSPERWRRR 404

[Close]

BLAST of Sed0000443 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 5.3e-21
Identity = 72/182 (39.56%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 17  VNFPPPSS--------KLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRR 76
           V FPPP S            DFSP LIA++ ++A+AF+LV+Y  LIS++         RR
Sbjct: 35  VIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCH------RRR 94

Query: 77  HRRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGFFSSYGLDESVIKTIPL 136
           H           R    Y    ++  + +     +P  + T G     GLDES+IK+I  
Sbjct: 95  HNSSSTSAAAINRISSDYTWQGTNNNNNNGA--TNP--NQTIGGGGGDGLDESLIKSI-- 154

Query: 137 TVYTAKNRD-----RDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRA 186
           TVY  +  D      DC+VCL EF+ ++ +R LP C+HAFHV CID WL+SH+NCPLCRA
Sbjct: 155 TVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRA 204

[Close]

BLAST of Sed0000443 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 71/188 (37.77%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 19  FPPP---------SSKLPVDFSPPLIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRRH 78
           FPPP         SS     FSP LIA++ ++ +A +LV+Y  LIS++          RH
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKY--------CHRH 93

Query: 79  RRLWRRWRRRRRRPQSYLPSSSSGGDLDSLPYDSPFFDPTDGFFSS-YGLDESVIKTIPL 138
            +                  +SS   L+       FF  T    ++  GL+ES+IK+I  
Sbjct: 94  HQ------------------TSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSI-- 153

Query: 139 TVYTAKNRD-----RDCAVCLLEFEHDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRA 192
           TVY  K+ D      DC+VCL EFE ++ +R LP C+HAFH+ CID WL+SH+NCPLCRA
Sbjct: 154 TVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 193

[Close]

BLAST of Sed0000443 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-20
Identity = 70/204 (34.31%), Postives = 98/204 (48.04%), Query Frame = 0


Query: 34  LIAMVVVIAAAFLLVTYSRLISRHLFPPIIQTLRRHRRLWRRWRRRRRRPQSYLPSSSSG 93
           ++A V+++  A +L+      +R LF              R+ RR RRR  ++L S ++ 
Sbjct: 29  MLASVIILFVAVILILCFHSYARWLFR-------------RQNRRIRRRISAHLRSLAAA 88

Query: 94  GDLDSLPYDSPFFDPTDGFFSSYGLDESVIKTIPLTVYTAKNRD---RDCAVCLLEFEHD 153
                        DPT    S   LD +V++ IP+ VY+ K  +    +C+VCL EFE D
Sbjct: 89  R------------DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEED 148

Query: 154 DYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFT-PLMAARIRPSLDDTIL 213
           D  R LP C H FHVDCID W RS ++CPLCRA V +P  P T P   A + PS+     
Sbjct: 149 DEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV-QPAQPVTEPEPVAAVFPSVKP--- 199

Query: 214 RSIVLEPLAVGFIPNRDSESEITP 234
               +E    G   + D     TP
Sbjct: 209 ----IEDTEAGSSSSSDESESSTP 199

The following BLAST results are available for this feature:

BLAST of Sed0000443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902895.1	2.3e-183	85.68	RING-H2 finger protein ATL65 [Benincasa hispida]	[more]
XP_022943929.1	3.1e-180	85.01	RING-H2 finger protein ATL65 [Cucurbita moschata] >KAG7010952.1 RING-H2 finger p...	[more]
XP_023511773.1	4.0e-180	84.98	RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo]	[more]
XP_022986546.1	8.9e-180	84.60	RING-H2 finger protein ATL65 [Cucurbita maxima]	[more]
KAG6571140.1	3.4e-179	84.52	RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0000443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67YI6	4.4e-89	52.14	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
Q9SRQ8	7.4e-20	39.56	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	2.2e-19	37.77	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LZJ6	3.7e-19	34.31	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
P93823	6.5e-16	29.49	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]

BLAST of Sed0000443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVL7	1.5e-180	85.01	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448502...	[more]
A0A6J1JBG1	4.3e-180	84.60	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111484253 P...	[more]
A0A1S4E2C5	2.8e-179	84.47	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498427 PE=3 ...	[more]
A0A0A0LIL3	3.1e-178	82.62	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE...	[more]
A0A5A7TSC8	3.5e-166	85.83	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Sed0000443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18930.1	3.1e-90	52.14	RING/U-box superfamily protein	[more]
AT3G18930.2	3.1e-90	52.14	RING/U-box superfamily protein	[more]
AT3G03550.1	5.3e-21	39.56	RING/U-box superfamily protein	[more]
AT5G17600.1	1.5e-20	37.77	RING/U-box superfamily protein	[more]
AT3G62690.1	2.6e-20	34.31	AtL5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 140..181 e-value: 4.9E-6 score: 36.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 139..182 e-value: 1.8E-12 score: 47.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 140..182 score: 11.987676
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 111..186 e-value: 3.3E-20 score: 73.5
None	No IPR available	PANTHER	PTHR45676:SF74	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 10..360
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 139..182 e-value: 1.43651E-18 score: 76.5717
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 136..188
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 10..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000443.1	Sed0000443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding