Sed0000341 (gene) Chayote v1

Overview


Name	Sed0000341
Type	gene
Organism	Sechium edule (Chayote v1)
Description	polyadenylate-binding protein RBP47-like
Location	LG01: 2572263 .. 2579475 (-)
RNA-Seq Expression	Sed0000341
Synteny	Sed0000341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTTTGTAGTTTATAATTTTGAAGTAATTAACCGTAAACCATAGCTTCCTTGACGTCGCCACCCAGCGAGATCCACCGCCGTGAGCGCCGCCGTGCTTTGGGTGTCATAATATTATTTTATTATTAGAACCCACCAATCACAATAAAAACCTCTTTCCCCTTTCCATATCCTTTCTCTTTCTCTCTCTCTCTCTAGACTCCCCTTTTAGCAGCCTCTCTCTCTTTCTCTCTCTACAACCTGGTCTTCCTCATTCCCACCCTCCCAGCGCCGCCGTGCCGGAGTCGGAGAGAGAGAGAGAAAGAGAGGGAAAACCGAAGACGACGGCGACGGAGAGGCTTCCGAAGATCATGGCCCAGCCTTCCAACGGCGCCGATCTCAACCCCCAGCCTCCTCACCCTCACCACCAATGGTATCAACAGCAGCAGCAGTATCAGCAGCAATGGATGGCGATGCAGTACCCGGCCGCCGCCATGGCCATGATGCAGCAGCAGCAGCAGCAGCACATGATGATGTATCCTCCTCAGCATTACGTAGCGTATCCTCAACATCCTTATCAACAGCACCAACAGCCGCCGCCGCAACAGCAAGCTCACTCGCAGCGGCCTCGAAGGCAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCATGGATGGACGAGACCTATCTCCAGAACTGCTTCGCTCACACCGGCGAGGTCTAACTTATCGTTTCCAGTTTATTTATTTTTTTGTTTCTTTACAAATCTTAATCTAGAATTGTTCTTTGAGTTCATGTTAGATCCATTTGAGACTTGCTGTAGTGAGATCGATCGGATTTCTGTGAATCTGTGGCTGTTGATTTTGTTATTACTGCTTTTTGTATTGTTCTGAATTCGAAATGGTGGTCCAGAACGCGAATGCGAGAAGAATTGTTACTAAAGAGGGGAAAAATCTTAGACTGATTTTTCTTTTGTGTGGATATCTTTCTTTTTTCATCCATGAAATCAAGGGGGACTAGCATTAGTAATTTTAATTACTATTCCTCTGTCCTTGTTTTGACACTGCAATTATACTTGACACCTTAATGACGGGTGCAATCAGATCACAAGTAATTTATGTGCAATGAGTGAAATTTTTCCCCACAATTAAGTAATTTCTATTTTCACACATGATACACAAGTAGTTTATGATTGCCCAATCTGAGGATGTTTAGTACTACTATTAGTATTAGTTATGATCTAATCATGTGCAAGGAGATGGAGTAGGTGGGTGGGTTTATAACTTTTGACAATTTGATTTTTAGCTGCTAGAAACATAACTGTCACCCATTTTATCCATACCCTTTGCTATGCTATTGAAATTTATGTTTCCTTCCTTCCTCATGATTTCATGAAATGTAAATTGGTTTTAAATTAAAGTAGCGCTTATTTTCGATTAAATTAAAGCAAGGTGTATTCTTTTCTGAGTTTATTGTGTTCAAATAATTTGAGGCTGAATTTTTGCAAACATGAATGATTGGTCTTCGTCTTCGATGCGTGTATCGTAATGTATGGTTACCATTTTTCTTAATTCATCTGTGCAGCATTTTTGAGTGATGGATTGCTTGCTTGTGATTCTAGTTTACATTTGTCAATGTTTAGATGAATAACTTCTGCCTGTCTTTTATGTTTCCCATTGGTCTTAATCAAACTCCATCACGAGCATCATTTTTGGTCAGATTTGACTGAACCGTTTCTCTTATCTTGCTCCATGAACATGCAGGTTTCCTCTGTTAAGGTTATATGTAGTAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCGCATGCAACGGCTGATAAAGTTTTGCAGAATTATAGTGGTGCTATAATGCCAAACACAGAGCTTCCTTTCCGTCTCAATTGGGCAACCTTTAGTTCAAGTGATAGGCGACCAGAAACTGGTTCTGACCTATCTATATTTGTAGGTGATTTAGCTGTTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCCAATAGATACACATCTGTTAAAGGAGCGAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTCGTTAGGTTTGGTGATGAAAATGAAAGGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCTAAGAAAGCATCTGGATACCAACAAGGCTATTCTACACAAGGTCAGTGTTTGTTCTTATGGCATGACTTGACTACTAGGTGTGGTTGTTAATTTATATTTGAGATGAGATATTAATTCTCATACCAATCTCTGTTTTTTTTAAATTTTTTTTATTTAGCTGTGGTTCTGGCTGGTGGACATGTGAATGGCATGGCCGTTCAGGGTCCGCAATCAGATGGCGAGTCAAACAACACAACTGTTAGTTTATTCCTCTCTTTCTTTATTACTTTTTTTTTTGCTAGTACATAACTAACCAACTTGTGCTACTTCAGATATTTGTTGGTGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAGGCAATATTTCTCTAAATTCGGTGAGATCGTCTCTGTGAAAATCCCAATTGGAAAAGGATGTGGATTTGTGCAGTTTGCCAACAGGTTTTCTTCTTTTTCTGTGGAGCTTTCTGTTAAACATGCCTGTTGAACTTTTTCACATATTAGAAGTTATTAGAGGGTACAAAAGGGAAAGGCCACTCATGTCCAAGTTAAATTGAAAAGGCTGACCTTTGAAATTGCAGTCAGTTTTGGTTTGCTGTAGTGTTTGGCCATATTGGGTCTAAGACTTATGACCTTTATGCCTGTGTCTTTCTTTAGAATATTTTGATTAGGTAGCCTGCCTGCTTTTCTAGAATATTTGTATATATGTACTTTTTCTAATCATAATTGTAGCTACATGTTTTTAAAAGTAATCTCAGGAGGAACTTTAAAAAAAAAAAAACTTGACTTATTATTAATTACAATGCTCCTTTGCTAAGCTAATTGGAAGTTTAAAGTTTCTAAGAAGTTGCTAGCTTATTATTTCTTCTTTCAGATGTCACATAGCAACTAATTGACAACGGCTGACGGCTGAGTGTGTTTTCTGAAAATGGTTTTTTAGATTAAATTTTGAAACTCATTTGAGCTACTTAAAATTTAAACTTTTTACCTAGTAGTTTAACCTACAAGTTATTTGGGTGAATGATTTTTTAAAAGAAATTTGGACGGATGTTTTTCCTTCCCATACTCTATCCAACTTTTAGTTATATCAAATATAGTGTATTCGATTCATTTATACTTGTATATAAATAATGACTTAAGAAAATTTTGAAGGAAACACATATAAGAAGTGCTCATTGTTGTTTTATGCTTTTGTTGTTCTTGTTTCTTAAATGTCTTTAGATGTCTCAAGCTTCCGGAGTCAGAAACATTTCTAGTATTTAAAAACTTTAATTTTTGAAGGACATATAGCTTTCAAACAATGTCATGATCAAAGAGTGGTTGTCTTGTGAAGATAGTTGATGTGTGGCAAGCTGTCATGAACATTTACGGATAAGTAAAAATGTCATGGTCAAGGTTTCGAGTTTTCATGGATCATGTCATGTTTCACGAATCACGATATAATATCTTTTTGTTTTCAAGAAAAACAGCAGAATTGGGATAATAAAGTAAGTACAACAGAATGATTAGAATCCTTCTATTCTTAGTCAGTAAAAAAGGCCACCTCTTTCTCTTTAGGCTCTAACCAATCCTCAGAATAATTCTTTCCCATAGCAAAATGAGCCACGCTCGGCTGCTATATTTCCATATAAAGGAACAAATTTTTTAGAATCACTAATGAGATGACAATTAGATTTTCTAGCTCCTCTCCTTGAAAAGCTTCTCTGCAGTCAAAGAGTCAAATCCAACATGAATTGCATAAATACCGGGCTTTATTGGACTCGATTTAGTCACTAGAGCCTTAGAAATTGAAAGCAAATAGAACATAAATAACTTCAGATATCGTAGCCACTGCTCATCCCATTTTGGGGTTCTCATACCTTTATCGATCAACAATTTTAAAGCCAAACACATTACACAAGAAATATAGGATTTTGCTGGGACAACTTTACATCATGTTTCCAGTTTATGACGTTTACCAATGATTTTCAGGTGAAATTATAGGGGTTTGTGTGTGTGTGGGAATTGATTTAAGGTCTATGAAGATGACAGATGCCAAAAGGTTGAACTCTGTGATTGTCTGTGATTGCTTGCACTGCCAATATTTCTGTTCTCTCCCTGCGTTCTTCACAAAAATCTGTCGTTTGGCAGCTTGATGCAAACATCAATATCCTCATTACTTCCCCGACTCTTCCAATTTTAACAATCATTTGGGTCATTTATTTTATTAGAAAAACCAAATTTCACTTTATTGTAAAATGCCATGATTGAATTATGGGGCTATTTGGGGCAAGGCGCCAAGACCGGGAATGGAGAATAATTCTTCTTTCCCACGTTTAGGCTGCCAACCATCCTTCATTCCATTTCACTATTCATTCTCCTCATAATCATTATTATTCCTTCCATAATTTCATTTTCCATAACGATTTCTCTTTCTCTCTATACTCACTATTTTGTTTCCTATAATCATTTCGTGCACTACAAATATAGGTAATGGTTACCTTCCTAATCATTTTTTGCACCCCAAACATTAGATAATGATTCTCCATAACTATTCCCTTCATCCCAAATACTGATAATCATTTTCCTTCCTCATCCATTTTCCTTCTAATCCCATTCTCCCATAATAATTCTATTACTCTTATCCCAAACGCCCCCTATATGATTATTTCCTTCCATCTCTTAAAAAATTATTAGGTTGTTAACTCAACAGAAAATAGGAAAAAATCATTTCTTACACAGCTTTCAACTTTATTAAACCTTGAGCAGTAAAATTAAACCCTCCAAGAGTTGAGTTGGTGTTTTGTTTTGTTTTGTTCTTTTTTTGAAAAGATTTGTGGTTAGTGGTTGGCACTTTTTTTGTTGAAAAGGAACTTTTGGCTTTAAGTTCTTGGAGTTGTGTTGGGTGTCTGCTTTAGCCTTTAGCTGGGATTCAACATTTCACCGTTGAGTTGGACATTTTTTTTGTATCAGTTTTGTGGTTGAGTTAGCCGTTTTAGTGGTTGGATTCAGATGATTTTAGTGGTTGGCATCTTATCATGTATTCTCAAGATTAATAGAGATATATTGATGGGTGTTTAAACAACTATCTAGCTTTGTTTTTGAAGAGGGTACTAATTTCAATTCTTCTTTAAGCTTGATTTTAACTGATTCGATTGTCGAATTACATAGATAAAAAATGAATTTTTGCTAAAAGACTATAATTAGGGCCATTAGTGGACCGCACCTGACCTATCTTTGTGTACATTTTTTTGTAGAAAAAATGCTGAGGATGCAATACAGGAACTGAATGGAACAGTTATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGGTTTGATCATGTGCTTTTCTTTTTGAATATTTATCCTGTTTTACTCCTCTTGTGAATGTTTTTAGATTATTAGTTAACTTCTGGCCTAGGATTTTAAAAAAATAAGCGTAGAAATGGGATCTGATGGCTGCATTTAGAATTATGCACACTTACGTGGGGTGGGGATATCTCATCTTCCCTCTTTTCTTTGCTCTGTCGATAATATTTTCTGTTTCCTATACCTAAAAAAATCATGACACTTCTTAACACTTCGGATACTTATTGGATACTTGGTATCCAACATCCGTGTAGACAACTTCTATATATATTGGACAAAAGGAATAATGGATTACCACGGAAAATTTATAAATTTATAAATTTATGACATTGACTTGAAAATCTTTTTACATGTTAGAAATGTTTATTTAGTTTTTCCTTTTTTTTCCAAATCTTTTGACGCATCACGAAGAAATGTTGATGGGTTCAATCGGTGGTAACCGGTAGGCACCTACCTAAGATAATATGTTCCACAAAAAATAATCAAAGTATGCGTACGGTGGCTTGGACCCTTAATGATTAAAAAAAAAAAAAATTCACGAGCCCCTGCATCATACTTACTTACCTTTTGATTTATTGCACATTTCGTGGTCTGTTTCTAATTGTGAACGATTCTCAATTCTCATTCATCTATTTTTATCTTCTAAAGATTTCAACTTCGAAAGACAAACAACTTATTCTTTATCTTATTTCTCCATTTCTGGTTGCAAAAGAGAAAGAAACTTTTTTTTTTCCCGTGTATCCTCTTCCAACTAGTGAATTTATGTTGTGGCAGTGGAGAGGCGATTCTAATAACCAATGGAACGGCGGCGGGCGTTACGGAGGGCAAGGGTATGGTGGATATGGTGGTTACTACTCAGCACCACAGCATCAGGACACAAACAACATGCAAGCCGCAGCTGCTGCAGTTGACGAGTCATCTTGAGAAAAGGGTATGGCCATTGCCACCATTTAAACTGAAATCTGAGCATTCAAAACACAAATCTCTTAAGCTATCATCAACACATAAACTTTGTGATAGAAAACTTATTTAAGTTGTGCTTAGCTGAATCTTTATTTGTTGAATCATATGGCTTGATAACATTATTATTACTCATGCTTCAGACCTGACTGCTTCTAGTTAGCTTAGCTTATCTCAACAATTTTGTGGTGTGGGTGAATTTTTCTTGGCTGAGAGGGTACTTTCTTTTTTCTTTATTTTAAGTCTAAATTTACAGATTATTATCATTATTTCATATATAGATGCTTGGAACTATACTACTGAAAATATCTTAATGACATGGAATCCTTAGAATTCTAGTGTTGTTCCATTATTCAGATTTTTGAAGAGTATAGGTTATAAGAACTGAAGAATTATAATTTCAAATGGAAGGTCCATCCCTTGAGCTATTTAAATTTCCAGAAAGATTCATGCAGGTCCAGTAGATGAACTTTATAGCATCTTAACCAATGGGTGCTTCTTAAATCTATTATGAGGTTTCCATAATTACTGGGTTTTTTTTTTTTTTCTTCAAGTCCTCATCTTGTTGGGGAAGTTTGACTGGTGAACAAAATTAAATGCATTACAAAACATTATTAGACTTTTTTTTGTGTTGGTTTTTTCCCCCACAAATTAATAGTTCCATGTGCTTCATCCCATGTGTA

mRNA sequence

TAATTTTGTAGTTTATAATTTTGAAGTAATTAACCGTAAACCATAGCTTCCTTGACGTCGCCACCCAGCGAGATCCACCGCCGTGAGCGCCGCCGTGCTTTGGGTGTCATAATATTATTTTATTATTAGAACCCACCAATCACAATAAAAACCTCTTTCCCCTTTCCATATCCTTTCTCTTTCTCTCTCTCTCTCTAGACTCCCCTTTTAGCAGCCTCTCTCTCTTTCTCTCTCTACAACCTGGTCTTCCTCATTCCCACCCTCCCAGCGCCGCCGTGCCGGAGTCGGAGAGAGAGAGAGAAAGAGAGGGAAAACCGAAGACGACGGCGACGGAGAGGCTTCCGAAGATCATGGCCCAGCCTTCCAACGGCGCCGATCTCAACCCCCAGCCTCCTCACCCTCACCACCAATGGTATCAACAGCAGCAGCAGTATCAGCAGCAATGGATGGCGATGCAGTACCCGGCCGCCGCCATGGCCATGATGCAGCAGCAGCAGCAGCAGCACATGATGATGTATCCTCCTCAGCATTACGTAGCGTATCCTCAACATCCTTATCAACAGCACCAACAGCCGCCGCCGCAACAGCAAGCTCACTCGCAGCGGCCTCGAAGGCAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCATGGATGGACGAGACCTATCTCCAGAACTGCTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGTAGTAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCGCATGCAACGGCTGATAAAGTTTTGCAGAATTATAGTGGTGCTATAATGCCAAACACAGAGCTTCCTTTCCGTCTCAATTGGGCAACCTTTAGTTCAAGTGATAGGCGACCAGAAACTGGTTCTGACCTATCTATATTTGTAGGTGATTTAGCTGTTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCCAATAGATACACATCTGTTAAAGGAGCGAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTCGTTAGGTTTGGTGATGAAAATGAAAGGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCTAAGAAAGCATCTGGATACCAACAAGGCTATTCTACACAAGCTGTGGTTCTGGCTGGTGGACATGTGAATGGCATGGCCGTTCAGGGTCCGCAATCAGATGGCGAGTCAAACAACACAACTATATTTGTTGGTGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAGGCAATATTTCTCTAAATTCGGTGAGATCGTCTCTGTGAAAATCCCAATTGGAAAAGGATGTGGATTTGTGCAGTTTGCCAACAGAAAAAATGCTGAGGATGCAATACAGGAACTGAATGGAACAGTTATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGCGATTCTAATAACCAATGGAACGGCGGCGGGCGTTACGGAGGGCAAGGGTATGGTGGATATGGTGGTTACTACTCAGCACCACAGCATCAGGACACAAACAACATGCAAGCCGCAGCTGCTGCAGTTGACGAGTCATCTTGAGAAAAGGGTATGGCCATTGCCACCATTTAAACTGAAATCTGAGCATTCAAAACACAAATCTCTTAAGCTATCATCAACACATAAACTTTGTGATAGAAAACTTATTTAAGTTGTGCTTAGCTGAATCTTTATTTGTTGAATCATATGGCTTGATAACATTATTATTACTCATGCTTCAGACCTGACTGCTTCTAGTTAGCTTAGCTTATCTCAACAATTTTGTGGTGTGGGTGAATTTTTCTTGGCTGAGAGGGTACTTTCTTTTTTCTTTATTTTAAGTCTAAATTTACAGATTATTATCATTATTTCATATATAGATGCTTGGAACTATACTACTGAAAATATCTTAATGACATGGAATCCTTAGAATTCTAGTGTTGTTCCATTATTCAGATTTTTGAAGAGTATAGGTTATAAGAACTGAAGAATTATAATTTCAAATGGAAGGTCCATCCCTTGAGCTATTTAAATTTCCAGAAAGATTCATGCAGGTCCAGTAGATGAACTTTATAGCATCTTAACCAATGGGTGCTTCTTAAATCTATTATGAGGTTTCCATAATTACTGGGTTTTTTTTTTTTTTCTTCAAGTCCTCATCTTGTTGGGGAAGTTTGACTGGTGAACAAAATTAAATGCATTACAAAACATTATTAGACTTTTTTTTGTGTTGGTTTTTTCCCCCACAAATTAATAGTTCCATGTGCTTCATCCCATGTGTA

Coding sequence (CDS)

ATGGCCCAGCCTTCCAACGGCGCCGATCTCAACCCCCAGCCTCCTCACCCTCACCACCAATGGTATCAACAGCAGCAGCAGTATCAGCAGCAATGGATGGCGATGCAGTACCCGGCCGCCGCCATGGCCATGATGCAGCAGCAGCAGCAGCAGCACATGATGATGTATCCTCCTCAGCATTACGTAGCGTATCCTCAACATCCTTATCAACAGCACCAACAGCCGCCGCCGCAACAGCAAGCTCACTCGCAGCGGCCTCGAAGGCAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCATGGATGGACGAGACCTATCTCCAGAACTGCTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGTAGTAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCGCATGCAACGGCTGATAAAGTTTTGCAGAATTATAGTGGTGCTATAATGCCAAACACAGAGCTTCCTTTCCGTCTCAATTGGGCAACCTTTAGTTCAAGTGATAGGCGACCAGAAACTGGTTCTGACCTATCTATATTTGTAGGTGATTTAGCTGTTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCCAATAGATACACATCTGTTAAAGGAGCGAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTCGTTAGGTTTGGTGATGAAAATGAAAGGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCTAAGAAAGCATCTGGATACCAACAAGGCTATTCTACACAAGCTGTGGTTCTGGCTGGTGGACATGTGAATGGCATGGCCGTTCAGGGTCCGCAATCAGATGGCGAGTCAAACAACACAACTATATTTGTTGGTGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAGGCAATATTTCTCTAAATTCGGTGAGATCGTCTCTGTGAAAATCCCAATTGGAAAAGGATGTGGATTTGTGCAGTTTGCCAACAGAAAAAATGCTGAGGATGCAATACAGGAACTGAATGGAACAGTTATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGCGATTCTAATAACCAATGGAACGGCGGCGGGCGTTACGGAGGGCAAGGGTATGGTGGATATGGTGGTTACTACTCAGCACCACAGCATCAGGACACAAACAACATGCAAGCCGCAGCTGCTGCAGTTGACGAGTCATCTTGA

Protein sequence

MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQHYVAYPQHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQHQDTNNMQAAAAAVDESS

Homology

[Close]

BLAST of Sed0000341 vs. NCBI nr
Match: XP_022986538.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 751.5 bits (1939), Expect = 4.0e-213
Identity = 390/438 (89.04%), Postives = 405/438 (92.47%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPH QW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   MMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MMMYPPQH 60

Query: 61  YVAYPQHPYQQHQQPPP-----QQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNC 120
           Y+ Y   PYQ  QQPPP     QQQA SQRPRRQGSTDEVKTLWIGDLQPWMDETYL NC
Sbjct: 61  YMTYSHLPYQ--QQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120

Query: 121 FAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWAT 180
           FAH GEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GAIMPNT+LPFRLNWAT
Sbjct: 121 FAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS SDRRP+TGSDLSIFVGDLA DVTDAMLQETFS++YTSVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAV 300
           VRFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH NGMAV
Sbjct: 241 VRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 300

Query: 301 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360
           QG QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQ 420
           EDAIQ LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQGYGGYGGYYS PQ
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQGYGGYGGYYSIPQ 420

Query: 421 HQDTNNMQAAAAAVDESS 434
           HQD  NM AAAAAV+ +S
Sbjct: 421 HQDA-NMHAAAAAVNGTS 431

[Close]

BLAST of Sed0000341 vs. NCBI nr
Match: XP_022148600.1 (polyadenylate-binding protein RBP47 [Momordica charantia])

HSP 1 Score: 749.6 bits (1934), Expect = 1.5e-212
Identity = 387/435 (88.97%), Postives = 403/435 (92.64%), Query Frame = 0


Query: 2   AQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQHY 61
           AQPSNGADLNPQPPHPHHQW+ QQQQYQQQWMAMQYPAAAMAMMQQQQ   MMMYPPQHY
Sbjct: 3   AQPSNGADLNPQPPHPHHQWF-QQQQYQQQWMAMQYPAAAMAMMQQQQ---MMMYPPQHY 62

Query: 62  VAYPQHPYQQHQQPP--PQQQAHSQRPRR-QGSTDEVKTLWIGDLQPWMDETYLQNCFAH 121
           +AY  HPYQQ QQ P   QQQA  QRPRR QGSTDEVKTLWIGDLQPWMDETYL +CF H
Sbjct: 63  MAYSHHPYQQQQQQPQQQQQQAQPQRPRRLQGSTDEVKTLWIGDLQPWMDETYLHSCFVH 122

Query: 122 TGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSS 181
           TGEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GAIMPNTELPFRLNWATFS+
Sbjct: 123 TGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSA 182

Query: 182 SDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRF 241
           +DRRP+TGSDLSIFVGDLA DVTDAMLQETFS+R+TSVKGAKVVIDSNSGRSKGYGFVRF
Sbjct: 183 TDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGFVRF 242

Query: 242 GDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQGP 301
           GDENER+RAMTEMNG+YCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH NGMAVQG 
Sbjct: 243 GDENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGS 302

Query: 302 QSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 361
           Q DGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA
Sbjct: 303 QPDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 362

Query: 362 IQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQHQD 421
           IQ LNGTVIGKQT+RLSWGRSTGNKQWRGDSNNQWN GGRYGGQGYGGY GYYS PQHQD
Sbjct: 363 IQGLNGTVIGKQTIRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQGYGGYSGYYSVPQHQD 422

Query: 422 TNNMQAAAAAVDESS 434
           TN    AAA V+ SS
Sbjct: 423 TNMNATAAAEVNGSS 432

[Close]

BLAST of Sed0000341 vs. NCBI nr
Match: XP_022943942.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 746.1 bits (1925), Expect = 1.7e-211
Identity = 389/437 (89.02%), Postives = 404/437 (92.45%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPH QW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   MMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MMMYPPQH 60

Query: 61  YVAYPQHPYQQHQQPPP----QQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCF 120
           Y+ Y   PYQ  QQPPP    QQQA SQRPRRQGSTDEVKTLWIGDLQPWMDETYL NCF
Sbjct: 61  YMTYSHLPYQ--QQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATF 180
           AH GEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GAIMPNT+LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S SDRRP+TGSDLSIFVGDLA DVTDAMLQETFS++YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQ 300
           RFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360
           G QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQH 420
           DAIQ LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQGYGGYGGYY  PQH
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQGYGGYGGYY-IPQH 420

Query: 421 QDTNNMQAAAAAVDESS 434
           QD  NM AAAAAV+ +S
Sbjct: 421 QDA-NMHAAAAAVNGTS 429

[Close]

BLAST of Sed0000341 vs. NCBI nr
Match: XP_038901011.1 (polyadenylate-binding protein RBP47 [Benincasa hispida])

HSP 1 Score: 745.7 bits (1924), Expect = 2.2e-211
Identity = 386/440 (87.73%), Postives = 405/440 (92.05%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHP-HHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQ 60
           MAQPSNGADLNPQ PHP HHQW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   MMMYPPQ
Sbjct: 1   MAQPSNGADLNPQAPHPHHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MMMYPPQ 60

Query: 61  HYVAYPQHPY----QQHQQPPPQ--QQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQ 120
           HY+AY  HPY    QQHQQP  Q  QQA SQRPRRQGSTDEVKTLWIGDLQPWMDETYL 
Sbjct: 61  HYMAYSHHPYQQQQQQHQQPSQQQHQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLN 120

Query: 121 NCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNW 180
           NCFAHTGEV SVKVIC+KQTGQSEGYGFVEFYSHATADK+LQNY+GAIMPNT+LPFRLNW
Sbjct: 121 NCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKILQNYNGAIMPNTDLPFRLNW 180

Query: 181 ATFSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGY 240
           ATFSS+DRRP+TGSDLSIFVGDLA DVTDAMLQETFS+RY SVKGAKVVIDSNSGRSKGY
Sbjct: 181 ATFSSNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYASVKGAKVVIDSNSGRSKGY 240

Query: 241 GFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGM 300
           GFVRF DENER+RAMTEMNGIYCSSRPMRIGVATPKKASGYQQGY++QA+VLAGGH NG+
Sbjct: 241 GFVRFSDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGI 300

Query: 301 AVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRK 360
           AVQG QSDGESNNTTIFVGGLDSDVSDEDL+Q FSKFG++VSVKIPIGKGCGFVQFANRK
Sbjct: 301 AVQGSQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGDVVSVKIPIGKGCGFVQFANRK 360

Query: 361 NAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSA 420
           NAEDAIQ LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQ YGGYGGYYS 
Sbjct: 361 NAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQSYGGYGGYYSV 420

Query: 421 PQHQDTNNMQAAAAAVDESS 434
           PQHQD  NM   AA+V+ SS
Sbjct: 421 PQHQDA-NMHPTAASVNGSS 435

[Close]

BLAST of Sed0000341 vs. NCBI nr
Match: XP_004145357.2 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical protein Csa_006374 [Cucumis sativus])

HSP 1 Score: 745.0 bits (1922), Expect = 3.7e-211
Identity = 385/441 (87.30%), Postives = 406/441 (92.06%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPHHQW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   M+MYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MVMYPPQH 60

Query: 61  YVAYPQHPY----QQHQQPPPQQQ---AHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQ 120
           Y+AY  HPY    QQ QQP  QQQ   A SQRPRRQGSTDEVKTLWIGDLQPWMDETYL 
Sbjct: 61  YMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLN 120

Query: 121 NCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNW 180
           NCFAHTGEVSSVKVIC+KQTGQSEGYGFVEF+SH TA+KVLQNY+G IMPNTELPFRLNW
Sbjct: 121 NCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 180

Query: 181 ATFSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGY 240
           ATFS++DRRP+TGSDLSIFVGDLA DVTDA+LQETFS+RYTSVKGAKVVIDSNSGRSKGY
Sbjct: 181 ATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGY 240

Query: 241 GFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGM 300
           GFVRFGDENER+RAMTEMNGIYCSSRPMRIGVATPKKASGYQQGY++QA+VLAGGH NGM
Sbjct: 241 GFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGM 300

Query: 301 AVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRK 360
           AVQG QSD ESNNTTIFVGGLDSDVSDEDL+Q FSKFG++VSVKIPIGKGCGFVQFANRK
Sbjct: 301 AVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRK 360

Query: 361 NAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSA 420
           NAEDAIQ LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQ YGGYGGYYS 
Sbjct: 361 NAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQSYGGYGGYYSV 420

Query: 421 PQHQDTN-NMQAAAAAVDESS 434
           PQHQD N +  AAAAAV+ SS
Sbjct: 421 PQHQDPNMHPTAAAAAVNGSS 437

[Close]

BLAST of Sed0000341 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 7.7e-143
Identity = 288/438 (65.75%), Postives = 331/438 (75.57%), Query Frame = 0


Query: 3   QPSNGADL----------NPQPPHPHHQWYQQQQQYQQQWM-AMQYPAAAMAMMQQQQQQ 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQYP AA  MM QQQQ 
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQ- 61

Query: 63  HMMMYPPQHYVAYPQHPYQQHQQPPPQQQAHSQRPRRQ------GSTDEVKTLWIGDLQP 122
            M+MYP Q YV Y Q PYQQH     Q  ++ Q   +Q      GS D+VKTLW+GDL  
Sbjct: 62  -MLMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLH 121

Query: 123 WMDETYLQNCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNT 182
           WMDETYL +CF+HTGEVSSVKVI +K T QSEGYGFVEF S A A++VLQNYSG++MPN+
Sbjct: 122 WMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNS 181

Query: 183 ELPFRLNWATFSSSDRRP-ETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVID 242
           + PFR+NWA+FS+ ++R  E G DLS+FVGDL+ DVTD +L ETFS+RY SVK AKVVID
Sbjct: 182 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVID 241

Query: 243 SNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVV 302
           SN+GRSKGYGFVRFGDENERSRA+TEMNG YCS+R MR+G+ATPK+A   QQ +S+QAV+
Sbjct: 242 SNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVI 301

Query: 303 LAGGH-VNGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKG 362
           LAGGH  NG    G QSDGES N TIFVGG+D DV DEDLRQ FS+FGE+VSVKIP+GKG
Sbjct: 302 LAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKG 361

Query: 363 CGFVQFANRKNAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQG 422
           CGFVQFA+RK+AEDAI+ LNGTVIGK TVRLSWGRS  NKQWRGDS  QWN GG   G G
Sbjct: 362 CGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWN-GGYSRGHG 421

[Close]

BLAST of Sed0000341 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.5e-141
Identity = 281/435 (64.60%), Postives = 337/435 (77.47%), Query Frame = 0


Query: 6   NGADLNPQPPHPHHQWYQQQ------QQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQ 65
           NG D+N Q      Q  QQQ      QQYQQQWMAMQYPAAAMAM QQ      MMY  Q
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAMQQQ------MMY-GQ 61

Query: 66  HYVAYPQHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCFAHT 125
            Y+ Y    YQQHQQ    QQ+ +Q    Q S+++ KT+WIGDLQ WMDE+YL +CF+  
Sbjct: 62  QYMPY----YQQHQQQQKMQQSPTQ---IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQA 121

Query: 126 GEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSSS 185
           GEV SVK+I +KQTGQSE YGFVEF +HA A+KVLQ+Y+G +MPNTE PFRLNWA FS+ 
Sbjct: 122 GEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTG 181

Query: 186 DRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRFG 245
           ++R ETGSD SIFVGDLA DVTD ML++TF++RY S+KGAKVV+D+N+G SKGYGFVRFG
Sbjct: 182 EKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFG 241

Query: 246 DENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHV-NGMAVQGP 305
           DE+ERSRAMTEMNG+YCSSR MRIGVATPKK S ++Q YS+QAV+L+GG+  NG A  G 
Sbjct: 242 DESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAATHGS 301

Query: 306 QSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 365
           QSDG+S+NTTIFVGGLDS+V+DE+LRQ F++FGE+VSVKIP GKGCGFVQF++R +A++A
Sbjct: 302 QSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEA 361

Query: 366 IQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQHQD 425
           IQ+L+G +IGKQ VRLSWGRS  NKQ R DS +QWNGG   G Q YGGYG  Y A Q+QD
Sbjct: 362 IQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYN-GRQNYGGYG--YGASQNQD 417

Query: 426 TNNMQAAAAAVDESS 434
            + M A  AA   SS
Sbjct: 422 -SGMYATGAAYGASS 417

[Close]

BLAST of Sed0000341 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.7e-137
Identity = 284/446 (63.68%), Postives = 322/446 (72.20%), Query Frame = 0


Query: 4   PSNGADLNPQPP-----HPHHQWYQQQQQYQQQWMA--MQYPAAAMAMMQQQQQQHMMMY 63
           P   A   P PP      P  Q  QQQ Q QQQWMA   QYPAAAMAMMQQQQ   MMMY
Sbjct: 15  PPTSAGTTPPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQ---MMMY 74

Query: 64  PPQHYVAYPQHPYQQHQQ------PPPQQQAH--SQRPRRQGSTDEVKTLWIGDLQPWMD 123
           P   Y  Y Q  YQQH Q         QQQ H   Q+PR     D+VKTLW+GDL  WMD
Sbjct: 75  PHPQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMD 134

Query: 124 ETYLQNCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELP 183
           ETYL  CF+HT EVSSVKVI +KQT QSEGYGFVEF S + A++ LQ++SG  MPN E P
Sbjct: 135 ETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQP 194

Query: 184 FRLNWATFSSSDRR-PETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNS 243
           FRLNWA+FS+ ++R  E G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+
Sbjct: 195 FRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNT 254

Query: 244 GRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAG 303
           GRSKGYGFVRFGDENERSRAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   +QA+ LAG
Sbjct: 255 GRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAG 314

Query: 304 GHVNGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFV 363
           GH       G  SDGESNN+TIFVGGLD+DV++EDL Q FS FGE+VSVKIP+GKGCGFV
Sbjct: 315 GH----GGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFV 374

Query: 364 QFANRKNAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGY 423
           QFANR++AE+AI  LNGTVIGK TVRLSWGRS  NKQWR DS NQWNG       GY   
Sbjct: 375 QFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNG-------GYSRG 434

Query: 424 GGYYSAPQHQDTNNMQAAAAAVDESS 434
            GY +   +QD+N    AAAAV  +S
Sbjct: 435 QGYNNGYANQDSNMYATAAAAVPGAS 445

[Close]

BLAST of Sed0000341 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.4e-107
Identity = 232/413 (56.17%), Postives = 275/413 (66.59%), Query Frame = 0


Query: 6   NGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQHYVAYP 65
           N    +P PP PH             W  M+YP   M  M       M   P   Y  YP
Sbjct: 39  NQPKTSPTPPPPH-------------W--MRYPPVLMPQMMYAPPPPMPFSP---YHQYP 98

Query: 66  QHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCF--AHTGEVS 125
            H +  HQ    + Q             E KT+W+GDLQ WMDE YL + F  A   E+ 
Sbjct: 99  NHHHFHHQSRGNKHQ--------NAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIV 158

Query: 126 SVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSSSDRRP 185
           S+KVI +K  G SEGYGFVEF SH  ADKVLQ ++GA MPNT+ PFRLNWA+FS+ ++R 
Sbjct: 159 SLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRL 218

Query: 186 E-TGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRFGDEN 245
           E  G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRFGDEN
Sbjct: 219 ENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 278

Query: 246 ERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQGPQSDG 305
           ER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG++   A    +S+G
Sbjct: 279 ERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAF--TRSEG 338

Query: 306 ESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQEL 365
           ++ NTTIFVGGLDS V+DEDL+Q FS+FGEIVSVKIP+GKGCGFVQF NR NAE+A+++L
Sbjct: 339 DTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKL 398

Query: 366 NGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQ 416
           NGTVIGKQTVRLSWGR+  NKQ R    NQW     YGGQ Y GYG  Y  PQ
Sbjct: 399 NGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-VDPYYGGQFYNGYG--YMVPQ 411

[Close]

BLAST of Sed0000341 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 4.1e-104
Identity = 226/418 (54.07%), Postives = 277/418 (66.27%), Query Frame = 0


Query: 9   DLNPQPPHPHHQWYQQQQQYQQQ--------WMAMQYPAAAMAMMQQQQQQHMMMYPPQH 68
           D  P PP P  Q   ++++ Q +        W  M+YP   +         H MMY P  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVII-------PHQMMYAPPP 79

Query: 69  YVAYPQHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCFA--H 128
           +  Y Q+P   H     +   H     +     E KT+W+GDL  WMDE YL + FA   
Sbjct: 80  FPPYHQYPNHHHLHHQSRGNKH-----QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGD 139

Query: 129 TGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSS 188
             E+ SVKVI +K  G SEGYGFVEF SH  ADKVL+ ++G  MPNT+ PFRLNWA+FS+
Sbjct: 140 EREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFST 199

Query: 189 SDRRPE-TGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVR 248
            ++R E  G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 200 GEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 259

Query: 249 FGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQG 308
           FGDENER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG++    +  
Sbjct: 260 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPNGTLTR 319

Query: 309 PQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAED 368
           P  +G+  NTTIFVGGLDS V+DEDL+Q F++FGEIVSVKIP+GKGCGFVQF NR NAE+
Sbjct: 320 P--EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEE 379

Query: 369 AIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQ 416
           A+++LNGTVIGKQTVRLSWGR+  NKQ R    NQW     YGGQ Y GYG  Y  PQ
Sbjct: 380 ALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-VDPYYGGQFYNGYG--YMVPQ 409

[Close]

BLAST of Sed0000341 vs. ExPASy TrEMBL
Match: A0A6J1JGT7 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111484248 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.9e-213
Identity = 390/438 (89.04%), Postives = 405/438 (92.47%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPH QW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   MMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MMMYPPQH 60

Query: 61  YVAYPQHPYQQHQQPPP-----QQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNC 120
           Y+ Y   PYQ  QQPPP     QQQA SQRPRRQGSTDEVKTLWIGDLQPWMDETYL NC
Sbjct: 61  YMTYSHLPYQ--QQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120

Query: 121 FAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWAT 180
           FAH GEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GAIMPNT+LPFRLNWAT
Sbjct: 121 FAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS SDRRP+TGSDLSIFVGDLA DVTDAMLQETFS++YTSVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAV 300
           VRFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH NGMAV
Sbjct: 241 VRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 300

Query: 301 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360
           QG QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQ 420
           EDAIQ LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQGYGGYGGYYS PQ
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQGYGGYGGYYSIPQ 420

Query: 421 HQDTNNMQAAAAAVDESS 434
           HQD  NM AAAAAV+ +S
Sbjct: 421 HQDA-NMHAAAAAVNGTS 431

[Close]

BLAST of Sed0000341 vs. ExPASy TrEMBL
Match: A0A6J1D3C6 (polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC111017220 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.3e-213
Identity = 387/435 (88.97%), Postives = 403/435 (92.64%), Query Frame = 0


Query: 2   AQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQHY 61
           AQPSNGADLNPQPPHPHHQW+ QQQQYQQQWMAMQYPAAAMAMMQQQQ   MMMYPPQHY
Sbjct: 3   AQPSNGADLNPQPPHPHHQWF-QQQQYQQQWMAMQYPAAAMAMMQQQQ---MMMYPPQHY 62

Query: 62  VAYPQHPYQQHQQPP--PQQQAHSQRPRR-QGSTDEVKTLWIGDLQPWMDETYLQNCFAH 121
           +AY  HPYQQ QQ P   QQQA  QRPRR QGSTDEVKTLWIGDLQPWMDETYL +CF H
Sbjct: 63  MAYSHHPYQQQQQQPQQQQQQAQPQRPRRLQGSTDEVKTLWIGDLQPWMDETYLHSCFVH 122

Query: 122 TGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSS 181
           TGEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GAIMPNTELPFRLNWATFS+
Sbjct: 123 TGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSA 182

Query: 182 SDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRF 241
           +DRRP+TGSDLSIFVGDLA DVTDAMLQETFS+R+TSVKGAKVVIDSNSGRSKGYGFVRF
Sbjct: 183 TDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGFVRF 242

Query: 242 GDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQGP 301
           GDENER+RAMTEMNG+YCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH NGMAVQG 
Sbjct: 243 GDENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGS 302

Query: 302 QSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 361
           Q DGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA
Sbjct: 303 QPDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 362

Query: 362 IQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQHQD 421
           IQ LNGTVIGKQT+RLSWGRSTGNKQWRGDSNNQWN GGRYGGQGYGGY GYYS PQHQD
Sbjct: 363 IQGLNGTVIGKQTIRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQGYGGYSGYYSVPQHQD 422

Query: 422 TNNMQAAAAAVDESS 434
           TN    AAA V+ SS
Sbjct: 423 TNMNATAAAEVNGSS 432

[Close]

BLAST of Sed0000341 vs. ExPASy TrEMBL
Match: A0A6J1FUF1 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111448515 PE=4 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 8.1e-212
Identity = 389/437 (89.02%), Postives = 404/437 (92.45%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPH QW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   MMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MMMYPPQH 60

Query: 61  YVAYPQHPYQQHQQPPP----QQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCF 120
           Y+ Y   PYQ  QQPPP    QQQA SQRPRRQGSTDEVKTLWIGDLQPWMDETYL NCF
Sbjct: 61  YMTYSHLPYQ--QQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATF 180
           AH GEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GAIMPNT+LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S SDRRP+TGSDLSIFVGDLA DVTDAMLQETFS++YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQ 300
           RFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360
           G QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQH 420
           DAIQ LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQGYGGYGGYY  PQH
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQGYGGYGGYY-IPQH 420

Query: 421 QDTNNMQAAAAAVDESS 434
           QD  NM AAAAAV+ +S
Sbjct: 421 QDA-NMHAAAAAVNGTS 429

[Close]

BLAST of Sed0000341 vs. ExPASy TrEMBL
Match: A0A1S3C9N4 (polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 2.0e-210
Identity = 383/443 (86.46%), Postives = 403/443 (90.97%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPHHQW+QQQQQYQQQWMAMQYPAAAMAMM QQQ   MMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQ---MMMYPPQH 60

Query: 61  YVAYPQHPY----QQHQQPPPQQQ---AHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQ 120
           Y+AY  HPY    QQ QQP  QQQ   A SQRPRRQGSTDEVKTLWIGDLQPWMDETYL 
Sbjct: 61  YMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLN 120

Query: 121 NCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNW 180
           NCFAHTGEVSSVKVIC+KQTGQSEGYGFVEF+SH TA+KVLQNY+G IMPNTELPFRLNW
Sbjct: 121 NCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 180

Query: 181 ATFSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGY 240
           ATFS++DRRP+TGSDLSIFVGDLA DVTDAMLQETFS+RYTSVKGAKVVIDSNSGRSKGY
Sbjct: 181 ATFSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGY 240

Query: 241 GFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGM 300
           GFVRFGDENER+RAM EMNGIYCSSRPMRIGVATPKKASGYQQGY++QA+VLAGGH NGM
Sbjct: 241 GFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGM 300

Query: 301 AVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRK 360
           AVQG QSD ESNNTTIFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFANRK
Sbjct: 301 AVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRK 360

Query: 361 NAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSA 420
           NAEDA+Q LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN GGRYGGQ YGGYGGYYS 
Sbjct: 361 NAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN-GGRYGGQSYGGYGGYYSV 420

Query: 421 PQHQDTN---NMQAAAAAVDESS 434
           PQHQD N      AAAAAV+ SS
Sbjct: 421 PQHQDPNIHPTAAAAAAAVNGSS 439

[Close]

BLAST of Sed0000341 vs. ExPASy TrEMBL
Match: A0A6J1KYU5 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111499959 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.2e-208
Identity = 386/455 (84.84%), Postives = 403/455 (88.57%), Query Frame = 0


Query: 1   MAQPSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQH 60
           MAQPSNGADLNPQ PHPHHQWYQQQ+QYQQQWMA+QYPAAAMAMMQQQQ   MMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWYQQQRQYQQQWMAVQYPAAAMAMMQQQQ---MMMYPPQH 60

Query: 61  YVAYPQHPYQQ----HQQPPP-------QQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDE 120
           YVAY  HPYQQ     QQPPP       QQQ  SQRPRRQGSTD+VKTLWIGDLQ WMDE
Sbjct: 61  YVAYSHHPYQQQQHPQQQPPPSQQQQQQQQQPQSQRPRRQGSTDDVKTLWIGDLQAWMDE 120

Query: 121 TYLQNCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPF 180
           TYL NCFAHTGEV SVKVIC+KQTGQSEGYGFVEFYSHATADKVLQNY+GA+MPNT+LPF
Sbjct: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180

Query: 181 RLNWATFSSSDRRPETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGR 240
           RLNWATFS +DRRP+TGSDLSIFVGDLA DVTDAMLQETFS++YTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGH 300
           SKGYGFVRFGDENE+SRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYS+QA+VLAGGH
Sbjct: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300

Query: 301 VNGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQF 360
            NGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQF
Sbjct: 301 ANGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQF 360

Query: 361 ANRKNAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGY-GGYG 420
           ANRKNAEDAIQ LNGTVIGKQ VRLSWGRSTG+KQWR DSNNQWN GGRYG  GY GGYG
Sbjct: 361 ANRKNAEDAIQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWN-GGRYGVPGYGGGYG 420

Query: 421 GYYSAPQHQDTNNMQ----------AAAAAVDESS 434
           GYYS PQ QD N             A AAAV+ SS
Sbjct: 421 GYYSVPQQQDANTQATVGAELMGHLAPAAAVNGSS 451

[Close]

BLAST of Sed0000341 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 508.4 bits (1308), Expect = 5.5e-144
Identity = 288/438 (65.75%), Postives = 331/438 (75.57%), Query Frame = 0


Query: 3   QPSNGADL----------NPQPPHPHHQWYQQQQQYQQQWM-AMQYPAAAMAMMQQQQQQ 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQYP AA  MM QQQQ 
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQ- 61

Query: 63  HMMMYPPQHYVAYPQHPYQQHQQPPPQQQAHSQRPRRQ------GSTDEVKTLWIGDLQP 122
            M+MYP Q YV Y Q PYQQH     Q  ++ Q   +Q      GS D+VKTLW+GDL  
Sbjct: 62  -MLMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLH 121

Query: 123 WMDETYLQNCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNT 182
           WMDETYL +CF+HTGEVSSVKVI +K T QSEGYGFVEF S A A++VLQNYSG++MPN+
Sbjct: 122 WMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNS 181

Query: 183 ELPFRLNWATFSSSDRRP-ETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVID 242
           + PFR+NWA+FS+ ++R  E G DLS+FVGDL+ DVTD +L ETFS+RY SVK AKVVID
Sbjct: 182 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVID 241

Query: 243 SNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVV 302
           SN+GRSKGYGFVRFGDENERSRA+TEMNG YCS+R MR+G+ATPK+A   QQ +S+QAV+
Sbjct: 242 SNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVI 301

Query: 303 LAGGH-VNGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKG 362
           LAGGH  NG    G QSDGES N TIFVGG+D DV DEDLRQ FS+FGE+VSVKIP+GKG
Sbjct: 302 LAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKG 361

Query: 363 CGFVQFANRKNAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQG 422
           CGFVQFA+RK+AEDAI+ LNGTVIGK TVRLSWGRS  NKQWRGDS  QWN GG   G G
Sbjct: 362 CGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWN-GGYSRGHG 421

[Close]

BLAST of Sed0000341 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 490.7 bits (1262), Expect = 1.2e-138
Identity = 284/446 (63.68%), Postives = 322/446 (72.20%), Query Frame = 0


Query: 4   PSNGADLNPQPP-----HPHHQWYQQQQQYQQQWMA--MQYPAAAMAMMQQQQQQHMMMY 63
           P   A   P PP      P  Q  QQQ Q QQQWMA   QYPAAAMAMMQQQQ   MMMY
Sbjct: 15  PPTSAGTTPPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQ---MMMY 74

Query: 64  PPQHYVAYPQHPYQQHQQ------PPPQQQAH--SQRPRRQGSTDEVKTLWIGDLQPWMD 123
           P   Y  Y Q  YQQH Q         QQQ H   Q+PR     D+VKTLW+GDL  WMD
Sbjct: 75  PHPQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMD 134

Query: 124 ETYLQNCFAHTGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELP 183
           ETYL  CF+HT EVSSVKVI +KQT QSEGYGFVEF S + A++ LQ++SG  MPN E P
Sbjct: 135 ETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQP 194

Query: 184 FRLNWATFSSSDRR-PETGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNS 243
           FRLNWA+FS+ ++R  E G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+
Sbjct: 195 FRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNT 254

Query: 244 GRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAG 303
           GRSKGYGFVRFGDENERSRAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   +QA+ LAG
Sbjct: 255 GRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAG 314

Query: 304 GHVNGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFV 363
           GH       G  SDGESNN+TIFVGGLD+DV++EDL Q FS FGE+VSVKIP+GKGCGFV
Sbjct: 315 GH----GGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFV 374

Query: 364 QFANRKNAEDAIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGY 423
           QFANR++AE+AI  LNGTVIGK TVRLSWGRS  NKQWR DS NQWNG       GY   
Sbjct: 375 QFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNG-------GYSRG 434

Query: 424 GGYYSAPQHQDTNNMQAAAAAVDESS 434
            GY +   +QD+N    AAAAV  +S
Sbjct: 435 QGYNNGYANQDSNMYATAAAAVPGAS 445

[Close]

BLAST of Sed0000341 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 391.3 bits (1004), Expect = 9.8e-109
Identity = 232/413 (56.17%), Postives = 275/413 (66.59%), Query Frame = 0


Query: 6   NGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQHYVAYP 65
           N    +P PP PH             W  M+YP   M  M       M   P   Y  YP
Sbjct: 39  NQPKTSPTPPPPH-------------W--MRYPPVLMPQMMYAPPPPMPFSP---YHQYP 98

Query: 66  QHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCF--AHTGEVS 125
            H +  HQ    + Q             E KT+W+GDLQ WMDE YL + F  A   E+ 
Sbjct: 99  NHHHFHHQSRGNKHQ--------NAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIV 158

Query: 126 SVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSSSDRRP 185
           S+KVI +K  G SEGYGFVEF SH  ADKVLQ ++GA MPNT+ PFRLNWA+FS+ ++R 
Sbjct: 159 SLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRL 218

Query: 186 E-TGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRFGDEN 245
           E  G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRFGDEN
Sbjct: 219 ENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 278

Query: 246 ERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQGPQSDG 305
           ER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG++   A    +S+G
Sbjct: 279 ERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAF--TRSEG 338

Query: 306 ESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQEL 365
           ++ NTTIFVGGLDS V+DEDL+Q FS+FGEIVSVKIP+GKGCGFVQF NR NAE+A+++L
Sbjct: 339 DTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKL 398

Query: 366 NGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQ 416
           NGTVIGKQTVRLSWGR+  NKQ R    NQW     YGGQ Y GYG  Y  PQ
Sbjct: 399 NGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-VDPYYGGQFYNGYG--YMVPQ 411

[Close]

BLAST of Sed0000341 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 379.8 bits (974), Expect = 2.9e-105
Identity = 226/418 (54.07%), Postives = 277/418 (66.27%), Query Frame = 0


Query: 9   DLNPQPPHPHHQWYQQQQQYQQQ--------WMAMQYPAAAMAMMQQQQQQHMMMYPPQH 68
           D  P PP P  Q   ++++ Q +        W  M+YP   +         H MMY P  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVII-------PHQMMYAPPP 79

Query: 69  YVAYPQHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCFA--H 128
           +  Y Q+P   H     +   H     +     E KT+W+GDL  WMDE YL + FA   
Sbjct: 80  FPPYHQYPNHHHLHHQSRGNKH-----QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGD 139

Query: 129 TGEVSSVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSS 188
             E+ SVKVI +K  G SEGYGFVEF SH  ADKVL+ ++G  MPNT+ PFRLNWA+FS+
Sbjct: 140 EREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFST 199

Query: 189 SDRRPE-TGSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVR 248
            ++R E  G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 200 GEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 259

Query: 249 FGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSTQAVVLAGGHVNGMAVQG 308
           FGDENER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG++    +  
Sbjct: 260 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPNGTLTR 319

Query: 309 PQSDGESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAED 368
           P  +G+  NTTIFVGGLDS V+DEDL+Q F++FGEIVSVKIP+GKGCGFVQF NR NAE+
Sbjct: 320 P--EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEE 379

Query: 369 AIQELNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYGGQGYGGYGGYYSAPQ 416
           A+++LNGTVIGKQTVRLSWGR+  NKQ R    NQW     YGGQ Y GYG  Y  PQ
Sbjct: 380 ALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-VDPYYGGQFYNGYG--YMVPQ 409

[Close]

BLAST of Sed0000341 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-95
Identity = 214/421 (50.83%), Postives = 257/421 (61.05%), Query Frame = 0


Query: 4   PSNGADLNPQPPHPHHQWYQQQQQYQQQWMAMQYPAAAMAMMQQQQQQHMMMYPPQHYVA 63
           PSN A     P    H W   QQQ QQQ   MQ  AA +                     
Sbjct: 5   PSNAAGAGQIPSGQQHLWMMMQQQQQQQ--QMQLSAAPLG-------------------- 64

Query: 64  YPQHPYQQHQQPPPQQQAHSQRPRRQGSTDEVKTLWIGDLQPWMDETYLQNCFAHTGEVS 123
             QH Y    Q P             GS  +VK+LWIGDLQ WMDE Y+ + FA +GE +
Sbjct: 65  --QHQYGIGSQNP-------------GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEAT 124

Query: 124 SVKVICSKQTGQSEGYGFVEFYSHATADKVLQNYSGAIMPNTELPFRLNWATFSSSDRRP 183
           S KVI +K TGQSEGYGF+EF SH+ A++VLQ Y+GA MP+TE  FRLNWA   + ++R 
Sbjct: 125 SAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRF 184

Query: 184 ET-GSDLSIFVGDLAVDVTDAMLQETFSNRYTSVKGAKVVIDSNSGRSKGYGFVRFGDEN 243
           +T G D +IFVGDLA +VTD ML +TF N Y SVKGAKVV+D  +GRSKGYGFVRF DEN
Sbjct: 185 QTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADEN 244

Query: 244 ERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQG-YSTQAVVLAGGHVNGMAVQGPQSD 303
           E+ RAMTEMNG YCS+RPMRIG A  K A   Q   Y       AG             D
Sbjct: 245 EQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAG-------------D 304

Query: 304 GESNNTTIFVGGLDSDVSDEDLRQYFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQE 363
            + NNTTIFVGGLD++V+D++L+  F +FGE++ VKIP GK CGFVQ+AN+ +AE A+  
Sbjct: 305 NDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSV 364

Query: 364 LNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGGRYG--GQGYGGYGGYYSAPQHQDT 421
           LNGT +G Q++RLSWGRS  NKQ       QWNGGG YG   Q  GGY GY + P  QD 
Sbjct: 365 LNGTQLGGQSIRLSWGRSP-NKQ---SDQAQWNGGGYYGYPPQPQGGY-GYAAQPPTQDP 370

The following BLAST results are available for this feature:

BLAST of Sed0000341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986538.1	4.0e-213	89.04	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]
XP_022148600.1	1.5e-212	88.97	polyadenylate-binding protein RBP47 [Momordica charantia]	[more]
XP_022943942.1	1.7e-211	89.02	polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Poly...	[more]
XP_038901011.1	2.2e-211	87.73	polyadenylate-binding protein RBP47 [Benincasa hispida]	[more]
XP_004145357.2	3.7e-211	87.30	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical...	[more]

BLAST of Sed0000341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WW84	7.7e-143	65.75	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
Q9LEB3	1.5e-141	64.60	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
F4I3B3	1.7e-137	63.68	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]
Q9SX80	1.4e-107	56.17	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9SX79	4.1e-104	54.07	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]

BLAST of Sed0000341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JGT7	1.9e-213	89.04	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1D3C6	7.3e-213	88.97	polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC1110172...	[more]
A0A6J1FUF1	8.1e-212	89.02	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3C9N4	2.0e-210	86.46	polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4...	[more]
A0A6J1KYU5	3.2e-208	84.84	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Sed0000341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19130.1	5.5e-144	65.75	RNA-binding protein 47B	[more]
AT1G49600.1	1.2e-138	63.68	RNA-binding protein 47A	[more]
AT1G47500.1	9.8e-109	56.17	RNA-binding protein 47C'	[more]
AT1G47490.1	2.9e-105	54.07	RNA-binding protein 47C	[more]
AT5G54900.1	1.6e-95	50.83	RNA-binding protein 45A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 97..170 e-value: 3.0E-13 score: 60.0 coord: 308..352 e-value: 0.1 score: 15.4 coord: 190..264 e-value: 2.0E-17 score: 73.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 309..351 e-value: 1.4E-12 score: 47.2 coord: 98..167 e-value: 2.2E-12 score: 46.6 coord: 191..261 e-value: 2.9E-14 score: 52.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 96..176 score: 13.907712
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 189..268 score: 16.721853
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 307..352 score: 14.453485
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 292..352 e-value: 1.0E-16 score: 62.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 95..174 e-value: 1.4E-22 score: 81.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 175..282 e-value: 1.4E-21 score: 78.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..94
None	No IPR available	PANTHER	PTHR47640:SF9	POLYADENYLATE-BINDING PROTEIN RBP47B	coord: 19..352
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 19..352
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 97..177 e-value: 4.58932E-45 score: 147.409
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 188..267 e-value: 3.98125E-48 score: 155.129
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 189..351
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 65..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000341.1	Sed0000341.1	mRNA
Sed0000341.2	Sed0000341.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding