Sed0000133 (gene) Chayote v1

Overview


Name	Sed0000133
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog A2B
Location	LG01: 6244415 .. 6246904 (-)
RNA-Seq Expression	Sed0000133
Synteny	Sed0000133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCAAGTTGTAAATTGACTAAAATAAAAAGAATTTCCATATTTTCTCCACCATCGTCAAACCCACACAGACGACAGCGCCATCAATCTTCTCTCTGTAACTTCTCTCATTCAATTCATTCCTATTTTTTCTTCGATTCTTTCTTCATCGTCTTCGCTCATTCCAATCTCGAACTTCTCATCCATTTCTTCGCCGACAGGTTTGAATTCTTCCTTTCCACTTTGGGGCTTTTCTCGATCCTTCGCGTTTTTCTGTAGATTGCTCCGATTTCATCGGTTTTGCCTTCTGATTTGCGGATTTTGATGTTTGGATCAGGTTTGTTCGAGAAATCCGGGGCGGAGGCGGCCATGGCGCACAAGGTGGACCACGAGTACGACTATCTCTTCAAGATTGTTCTGATCGGAGATTCCGGCGTCGGCAAGTCCAACATTCTCTCCAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGCGTTGAGTTCTCCACCAGGACTCTCGAGGTACAGCCTTCATCGGTTCGTTTTGTGCGTTTTTTTATCAACTTAATTTCAATTTCTTCATTGACTGCGTGAGTTGATTTTGTGATTGTGACGGACTTTAAAATTTTAGGTCTCGATGATTTCTAGATGTGGATTGGATTGGACCTTGGTTTTGCTTTCAATCGTTGAAGTACAGTGGATTTATTGGATGTAGAGTTTGAGTGATTGTTACTTTCTTGCTTGTAGCTACAAACGTTTAGGCTTTGACTTAATTGGTGCTGAATTTATTATGTTGCTCATCTAACAAGTAAATTACCATCTAGGCTTTTAGCCGTGTCTACCGATGACTGAGAGACGTTGAAACCATGTGTGCTCAATTATTCTTAATTATTGTTGTGACTGAGAGCAGTTGGAAATTGGCAGAATCCTTTTTCTATAAATCACACCTTATTTCTTACCAACTTAGAAAGCAACCTTGTGTGTGATTGTAGCATTCCACTAATTGGGAAATTCTCATGTAAAATTTTGAGTAGAATTAACATTTTTTTTAATAATTGGGAATCAGAGGGTCGTCTCACTCTATACTCGGGGCACCACGCCCATCCCAAAGTCTGGACTTGAGAAACAACAAGAAAGTTTACAATTATGCTTACTTGTGGATTTTGAACTTAGGACCTTCAAGGAAGTATAGCTTGGAGACTCCAAACTTATACTAACGAGACCGACTTTTGTGGATTTTGAATTTAGGACTTTCAAGGAAGTAGCTGATTTAAACTTATACTAACATACTGGGGAGGACCGTTCTCTATAACTGATTTAAATGTAGGAAAAACCAAATGCTTCTTATAAAAAGCTACGGTATGTCCATCCTAATTATGGCCAAACCAGTAGCTGTTGTGGTTCTAGTATTAAATATTACACCAACACCAGGAACTCATTGGTTGAGGGATGGCTATTCTGAGATTGAGATCTCAAACGAAAACTATCCGACATTCCTATTTATGGAATCATATAGATGTTGAATCCCTTCCTACTGTTTCTTATTTGTTCTCTACCCAGAATGATGTTCCAAGAACTTATATTGATAGTGAAAAGTGTTTTCCATCTCATTTTAGTCAATATTATTGTCATACAGGTAGAAGGTAAGACAGTCAAAGCACAGATCTGGGACACTGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATCGGGGAGCTGTTGGTGCTCTCCTTGTCTATGATCTCACAAAGAGGCAGACTTTCGACAACGTGCAAAGGTGGCTTCGAGAGCTGAGAGATCATGCAGATTCTAATATTGCGATTGTGATGATAGGAAACAAATCTGACCTAAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGGCCATGGCTGAGAAGGAAGGCCTTTCATTTATTGAGACGTCGGCCTTGGATGCGACTAACATCGACAAGGCTTTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCTAAGGAGGCAGCTGCAAGCGTCACCCATCCCGGTCAAGGAACGGCCATCAACATGACCGATACATCCGGGGACTCAAACGGTAGGGGTTGCTGCTCATCTTGAGACGACGATACAGAAAGATAGAAGTGATAGTTGACATCAAAGGTCTCTCTCGTGTTTCTTTTTCCTTATTTTATCATAATTGATCTGTTGTTTTTGATCTTCTGGATTTGGAGAAACTAGGAAAATGTAGTGTATTCATAGCCGGCTCGTAGAACGAATATCTTACTCGACCCCTCCTCGATCCCCCGGTTTATCTCATTAGCAAATGTCAGTTATTATCCTCGGCGATTTCCAAAGTTCTTCCTTGGTCCTTTTACTTACCCATTCATATAACAATTACATGGGGATTTGTATTTGTTCTCCATTTGCAACTCTTATTCAGAAATTCTTACGATTGTTAGTTGTCAAATTATACAGATTATGAGGCAGGTGGC

mRNA sequence

GAACCAAGTTGTAAATTGACTAAAATAAAAAGAATTTCCATATTTTCTCCACCATCGTCAAACCCACACAGACGACAGCGCCATCAATCTTCTCTCTGTAACTTCTCTCATTCAATTCATTCCTATTTTTTCTTCGATTCTTTCTTCATCGTCTTCGCTCATTCCAATCTCGAACTTCTCATCCATTTCTTCGCCGACAGGTTTGTTCGAGAAATCCGGGGCGGAGGCGGCCATGGCGCACAAGGTGGACCACGAGTACGACTATCTCTTCAAGATTGTTCTGATCGGAGATTCCGGCGTCGGCAAGTCCAACATTCTCTCCAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGCGTTGAGTTCTCCACCAGGACTCTCGAGGTAGAAGGTAAGACAGTCAAAGCACAGATCTGGGACACTGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATCGGGGAGCTGTTGGTGCTCTCCTTGTCTATGATCTCACAAAGAGGCAGACTTTCGACAACGTGCAAAGGTGGCTTCGAGAGCTGAGAGATCATGCAGATTCTAATATTGCGATTGTGATGATAGGAAACAAATCTGACCTAAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGGCCATGGCTGAGAAGGAAGGCCTTTCATTTATTGAGACGTCGGCCTTGGATGCGACTAACATCGACAAGGCTTTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCTAAGGAGGCAGCTGCAAGCGTCACCCATCCCGGTCAAGGAACGGCCATCAACATGACCGATACATCCGGGGACTCAAACGGTAGGGGTTGCTGCTCATCTTGAGACGACGATACAGAAAGATAGAAGTGATAGTTGACATCAAAGGTCTCTCTCGTGTTTCTTTTTCCTTATTTTATCATAATTGATCTGTTGTTTTTGATCTTCTGGATTTGGAGAAACTAGGAAAATGTAGTGTATTCATAGCCGGCTCGTAGAACGAATATCTTACTCGACCCCTCCTCGATCCCCCGGTTTATCTCATTAGCAAATGTCAGTTATTATCCTCGGCGATTTCCAAAGTTCTTCCTTGGTCCTTTTACTTACCCATTCATATAACAATTACATGGGGATTTGTATTTGTTCTCCATTTGCAACTCTTATTCAGAAATTCTTACGATTGTTAGTTGTCAAATTATACAGATTATGAGGCAGGTGGC

Coding sequence (CDS)

ATGGCGCACAAGGTGGACCACGAGTACGACTATCTCTTCAAGATTGTTCTGATCGGAGATTCCGGCGTCGGCAAGTCCAACATTCTCTCCAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGCGTTGAGTTCTCCACCAGGACTCTCGAGGTAGAAGGTAAGACAGTCAAAGCACAGATCTGGGACACTGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATCGGGGAGCTGTTGGTGCTCTCCTTGTCTATGATCTCACAAAGAGGCAGACTTTCGACAACGTGCAAAGGTGGCTTCGAGAGCTGAGAGATCATGCAGATTCTAATATTGCGATTGTGATGATAGGAAACAAATCTGACCTAAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGGCCATGGCTGAGAAGGAAGGCCTTTCATTTATTGAGACGTCGGCCTTGGATGCGACTAACATCGACAAGGCTTTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCTAAGGAGGCAGCTGCAAGCGTCACCCATCCCGGTCAAGGAACGGCCATCAACATGACCGATACATCCGGGGACTCAAACGGTAGGGGTTGCTGCTCATCTTGA

Protein sequence

MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAIVMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS

Homology

[Close]

BLAST of Sed0000133 vs. NCBI nr
Match: XP_023532299.1 (ras-related protein Rab11C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 1.9e-110
Identity = 208/217 (95.85%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDL+HLR+VSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAASV HPGQGT IN+T+TSGDSN RGCCSS
Sbjct: 181 ALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

[Close]

BLAST of Sed0000133 vs. NCBI nr
Match: XP_004143134.1 (ras-related protein Rab11C [Cucumis sativus] >XP_008464080.1 PREDICTED: ras-related protein Rab11C [Cucumis melo] >XP_031743658.1 ras-related protein Rab11C [Cucumis sativus] >KAA0061865.1 ras-related protein Rab2BV [Cucumis melo var. makuwa] >KAE8645886.1 hypothetical protein Csa_017717 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 4.2e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS+THPGQGT IN++DTSGDSN RGCCSS
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Sed0000133 vs. NCBI nr
Match: KAG7035384.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.3 bits (1048), Expect = 4.2e-110
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 31  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 90

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VK+QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNI I
Sbjct: 91  VKSQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 150

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDL+HLR+VSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 151 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 210

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAASV HPGQGT IN+T+TSGDSN RGCCSS
Sbjct: 211 ALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 247

[Close]

BLAST of Sed0000133 vs. NCBI nr
Match: KAG6605436.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 408.3 bits (1048), Expect = 4.2e-110
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 40  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 99

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VK+QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNI I
Sbjct: 100 VKSQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 159

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDL+HLR+VSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 160 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 219

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAASV HPGQGT IN+T+TSGDSN RGCCSS
Sbjct: 220 ALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 256

[Close]

BLAST of Sed0000133 vs. NCBI nr
Match: TYK15391.1 (ras-related protein Rab2BV [Cucumis melo var. makuwa])

HSP 1 Score: 408.3 bits (1048), Expect = 4.2e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 57  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 116

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNI I
Sbjct: 117 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 176

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 177 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 236

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS+THPGQGT IN++DTSGDSN RGCCSS
Sbjct: 237 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 273

[Close]

BLAST of Sed0000133 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-102
Identity = 186/217 (85.71%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFDNVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLR+VSEDDG A++EKEGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EA A  + PGQGT IN+ DTSG++  +GCCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTK-KGCCST 216

[Close]

BLAST of Sed0000133 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-98
Identity = 183/217 (84.33%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFDNVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL HLR+VSE+DGQA+AEKEGLSF+ETSAL+A NI+KAFQTILTEIYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EA++++  PGQGT IN+ D S +   R CCS+
Sbjct: 181 ALAAQEASSNL--PGQGTTINVADASANQR-RSCCST 214

[Close]

BLAST of Sed0000133 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 3.8e-98
Identity = 180/217 (82.95%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NV RWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+++DG+++AEKEGLSF+ETSAL+ATNI+KAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAA ++  PGQGTAIN++D+S  +N +GCCS+
Sbjct: 181 ALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of Sed0000133 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT +VEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFDNV RWLRELRDHADSNI I
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+E+DGQ++AEKEGLSF+ETSAL+ATN++KAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAKEAAASVTH-PGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAA+ +  PGQGT IN+ DTSG +  R CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAK-RACCSS 217

[Close]

BLAST of Sed0000133 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 179/217 (82.49%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MA++VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALL YD+TKRQTFDNVQRWLRELRDH DSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           ++ GNKSDL HLR+VSE D QA+ +KEGLSF+ETSAL+A N+DKAFQTILT+IYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS   PGQGT IN++D S +   RGCCS+
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANVK-RGCCST 216

[Close]

BLAST of Sed0000133 vs. ExPASy TrEMBL
Match: A0A5D3CU43 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00310 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 57  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 116

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNI I
Sbjct: 117 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 176

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 177 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 236

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS+THPGQGT IN++DTSGDSN RGCCSS
Sbjct: 237 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 273

[Close]

BLAST of Sed0000133 vs. ExPASy TrEMBL
Match: A0A5A7V7L9 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001070 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS+THPGQGT IN++DTSGDSN RGCCSS
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Sed0000133 vs. ExPASy TrEMBL
Match: A0A0A0KE61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS+THPGQGT IN++DTSGDSN RGCCSS
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Sed0000133 vs. ExPASy TrEMBL
Match: A0A6J1G4Z7 (ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDL+HLR+VSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+E+AASV HPGQGT IN+T+TSGDSN RGCCSS
Sbjct: 181 ALAAQESAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

[Close]

BLAST of Sed0000133 vs. ExPASy TrEMBL
Match: A0A1S3CKN1 (ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAAS+THPGQGT IN++DTSGDSN RGCCSS
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Sed0000133 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 359.0 bits (920), Expect = 2.7e-99
Identity = 180/217 (82.95%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NV RWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+++DG+++AEKEGLSF+ETSAL+ATNI+KAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAA ++  PGQGTAIN++D+S  +N +GCCS+
Sbjct: 181 ALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of Sed0000133 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 357.5 bits (916), Expect = 7.8e-99
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT +VEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFDNV RWLRELRDHADSNI I
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+E+DGQ++AEKEGLSF+ETSAL+ATN++KAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAKEAAASVTH-PGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAA+ +  PGQGT IN+ DTSG +  R CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAK-RACCSS 217

[Close]

BLAST of Sed0000133 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 354.4 bits (908), Expect = 6.6e-98
Identity = 179/218 (82.11%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFDNV RWLRELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNK+DL+HLRSV+E+DGQ +AE EGLSF+ETSAL+ATN++KAFQT+L EIYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAKEAAASVTH-PGQGTAINMTDTSGDSNGRGCCSS 218
           ALAA+EAAA+ +  PGQGT IN+ DTSG +  RGCCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

[Close]

BLAST of Sed0000133 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-84
Identity = 154/217 (70.97%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEF+TRTL+VEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNI I
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           ++IGNK+DL HLR+V+ +D Q+ AEKEGLSFIETSAL+A N++KAFQTIL+E+Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 ALAAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
           ++++ +  A+  +  +G  I++  TS  +  + CCSS
Sbjct: 181 SISSDQTTAN-ANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of Sed0000133 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 138/215 (64.19%), Postives = 174/215 (80.93%), Query Frame = 0


Query: 3   HKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKTVK 62
           ++ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+TR+L V  K +K
Sbjct: 4   YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIK 63

Query: 63  AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIAIVM 122
           AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV+RWLRELRDH D NI +++
Sbjct: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123

Query: 123 IGNKSDLSHLRSVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKAL 182
           +GNKSDL HL +V  +D ++ AE E L F+ETSAL++TN++ AF  +LT+IYH++SKKA+
Sbjct: 124 VGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAM 183

Query: 183 AAKEAAASVTHPGQGTAINMTDTSGDSNGRGCCSS 218
            A E + +V  P +G  I++ D S      GCCS+
Sbjct: 184 EAGEDSGNV--PSKGEKIDV-DVSAVKK-TGCCSN 214

The following BLAST results are available for this feature:

BLAST of Sed0000133 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532299.1	1.9e-110	95.85	ras-related protein Rab11C [Cucurbita pepo subsp. pepo]	[more]
XP_004143134.1	4.2e-110	94.93	ras-related protein Rab11C [Cucumis sativus] >XP_008464080.1 PREDICTED: ras-rela...	[more]
KAG7035384.1	4.2e-110	95.39	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605436.1	4.2e-110	95.39	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia]	[more]
TYK15391.1	4.2e-110	94.93	ras-related protein Rab2BV [Cucumis melo var. makuwa]	[more]

BLAST of Sed0000133 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	1.9e-102	85.71	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	1.0e-98	84.33	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q9LNW1	3.8e-98	82.95	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q96283	1.1e-97	83.49	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q40523	1.1e-97	82.49	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]

BLAST of Sed0000133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CU43	2.0e-110	94.93	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7V7L9	2.0e-110	94.93	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KE61	2.0e-110	94.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1	[more]
A0A6J1G4Z7	2.0e-110	95.39	ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV...	[more]
A0A1S3CKN1	2.0e-110	94.93	ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1	[more]

BLAST of Sed0000133 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07410.1	2.7e-99	82.95	RAB GTPase homolog A2B	[more]
AT3G46830.1	7.8e-99	83.49	RAB GTPase homolog A2C	[more]
AT5G59150.1	6.6e-98	82.11	RAB GTPase homolog A2D	[more]
AT1G09630.1	2.4e-84	70.97	RAB GTPase 11C	[more]
AT4G18800.1	1.0e-74	64.19	RAB GTPase homolog A1D	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 79..92 score: 45.04 coord: 114..136 score: 39.51 coord: 17..39 score: 55.55
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..139 e-value: 6.3E-12 score: 50.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..139 e-value: 1.0E-61 score: 221.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..180
None	No IPR available	PANTHER	PTHR47978:SF33	RAS-RELATED PROTEIN RABA2D	coord: 16..179
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 16..179
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..178 score: 26.029333
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..135 e-value: 4.5E-7 score: -27.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 16..137 e-value: 3.7E-44 score: 150.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..155 score: 15.579407
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..172 e-value: 7.8E-53 score: 180.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..142
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 17..133 e-value: 7.9E-27 score: 92.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000133.1	Sed0000133.1	mRNA
Sed0000133.2	Sed0000133.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004672	protein kinase activity