Sed0000084 (gene) Chayote v1

Overview
NameSed0000084
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG09: 9719713 .. 9721156 (-)
RNA-Seq ExpressionSed0000084
SyntenySed0000084
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGAAGTTGATGAGGAGAATGAAGGTTTGAGCCATAAAGATGAAGTTTATGTTGAAGAAGATGTAGAAGAAGTGGAATGCTTCAAATGCTACAACTCGACAAGGATGGATTAAGATAATGAACACAATTAAAGATGTAGAAGAAGGAGCTTATAATTGGCTATCTGCAATCCCTCCACAATTGTGGTGTAAGCATGCATTTAGTAGCTTCCTTAAATGTGACACCACCCTGAACAACATGTGTGAAACTTTCAATTCCACAATGCTAGAAGCAAGAGATAAGGTTCCAATTATTGAGATGATTGAATGGATTAGACCTTACCTCATGAGAAGGTTCCAAGAAAATAAACAAAAGATGAAGAATGTTAAAGGAAAAATATGTCCGAGGATTCAAAAAAAATTGGAAGAGAATAAGAAAAAAAGTGGAAGTTGGCTTTCTACTTGGTCCGGAGTTGAAAAGTTTGAGGTTATCAAAGGTAGTAACGAGGCATATATAGTCGGCTTGGCTAAGAGAACACGTTCTTGCTAGTATTGGAAGTTAACTGGACTCCCATGTGAGCATGCTATTAGTTCCATATTCTACAATTCTAGTATGATTGTTATTCCATAGCCGCGAAACGTTTATGCTCCCATGTTTCAACCTATAAATGGTGAAGACTTATGGTCACACATGGATTATGACACAATTATTCCTCCAATTATAAGAAGACAACCTAGACGACCGAAGAAATTGCGACGAAGAGAGCCCGATGAGAAAAAATCACATACTAAATTGAGTAGACAAAATATTTCTATGACATGCTCTATTTGTCAATAAATTGGGCATAACAACAAAAGTTGTAAAGGGAAGGTTAGTAAAATGTTAATTATTTGTATTCATTTTTTTTTTTGTTGACGTGATAACTTATTAGTACATGTTATATTTATAGGGCACTTTAGTGCAAAGTGGTGGAGGACAAACATCTAAAAAATTGGTAAACGCATTTTACTGTCAAGTATTGATTTCTTAACTTCTTTTAATGGTTATTTAATTGTTATAGGCAACCCTGAGTCGAGGTGGAAGTCAAAATATACAAATTAGAGATTCACAAGAATCAGGAAATGGACAAAATCATTTATTGTTTGTAAGCTATTTTTCACTTTTTTAGATTATTTGTAAATTGTATAGTGATTTTGAGTTACACTAGTTTTTACTTTGTCTACATTTTTTATTTTTCTTATCTATTTGAAAGAAAAATCTAGCTTATCTTCCACCAAAAGCTTCAGCCGGAATTTCGATGAATAATATGTCTGATAAGAAGAGGGAGAAACTGCCAATAAGAGGAAAATTGAAGAAGAAAGTTAACAGTTTTCCTTTGTTGCCAGTTTCAGACAATAACCGAGGAACAAATTTCATCCCCAATGATCCAGAAACCATGAGCAAGCAGTCAAACAAATGA

mRNA sequence

ATGTTGAAGAAACGACCGAAGAAATTGCGACGAAGAGAGCCCGATGAGAAAAAATCACATACTAAATTGACTTATCTTCCACCAAAAGCTTCAGCCGGAATTTCGATGAATAATATGTCTGATAAGAAGAGGGAGAAACTGCCAATAAGAGGAAAATTGAAGAAGAAAGTTAACAGTTTTCCTTTGTTGCCAGTTTCAGACAATAACCGAGGAACAAATTTCATCCCCAATGATCCAGAAACCATGAGCAAGCAGTCAAACAAATGA

Coding sequence (CDS)

ATGTTGAAGAAACGACCGAAGAAATTGCGACGAAGAGAGCCCGATGAGAAAAAATCACATACTAAATTGACTTATCTTCCACCAAAAGCTTCAGCCGGAATTTCGATGAATAATATGTCTGATAAGAAGAGGGAGAAACTGCCAATAAGAGGAAAATTGAAGAAGAAAGTTAACAGTTTTCCTTTGTTGCCAGTTTCAGACAATAACCGAGGAACAAATTTCATCCCCAATGATCCAGAAACCATGAGCAAGCAGTCAAACAAATGA

Protein sequence

MLKKRPKKLRRREPDEKKSHTKLTYLPPKASAGISMNNMSDKKREKLPIRGKLKKKVNSFPLLPVSDNNRGTNFIPNDPETMSKQSNK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000084.1Sed0000084.1mRNA