Pay0022585 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022585
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	CCHC-type domain-containing protein
Location	chr12: 15133050 .. 15133902 (+)
RNA-Seq Expression	Pay0022585
Synteny	Pay0022585

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTGCAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACTGAGGAAGCGGGGTCGAAGAAGTACAATGTCAATCGATACTTAAGATATCGAATGGAGGATGACAAATCCGTGGAGTCACAGTCACATGAAATCCAGAAAATAGCCCACGAGATTATTAGTGAAGGTATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATAAATTACCTCCATTGTGGAAGGATTTCAAGAACACCTTAAGGCACAAAACCAAGGAGTTCTCACTAGAAAGTCTAATCACGAGGCTAAGGATAGAGGAGGAAGCAAGGAAGCATGATAAAAAAGAAGAGGTGAACGCTATCCCTAGAAAGAAGCCCACTGCAATTCTAAAACCAGATCTGAAGCCGAAAGGAAACAAGATGAAACGAGGATCCAACAAACAAAACAACCCACAGTCTAGAAGTGCGGTATAAATTGTTTGTTATAATTGTAATAAGCCTGGTCATTTAGCTAGAAATTGTAGAAACAGGAGTTGTCCTACAGCGCAGGCGAACCTGATAGAAGATGAATTAGTAGCTATGATATCTGAAGTTAATGTGATGGGGGGTCTGAAGGTTGGTGGCTAGATTCTGGTGCATCCCACCATGTCTTCCACGACCTTAGTCTTTTTAGAAAATATAATGAAATTAAGGATAAAAATATCCTTCTAGGAGATCATCACACAACCAAGGTGGCTGGTATTGGAGAAGTAGAACTGAAATTCACATCCGACAAGACGCTTGTGCTGAAGGAAGTTTTGCATACTTCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTTCTCAACAAGGCTGA

mRNA sequence

ATGACTACTGCAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACTGAGGAAGCGGGGTCGAAGAAGTACAATGTCAATCGATACTTAAGATATCGAATGGAGGATGACAAATCCGTGGAGTCACAGTCACATGAAATCCAGAAAATAGCCCACGAGATTATTAGTGAAGGTATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATAAATTACCTCCATTGTGGAAGGATTTCAAGAACACCTTAAGGCACAAAACCAAGGAGTTCTCACTAGAAAGTCTAATCACGAGGCTAAGGATAGAGGAGGAAGCAAGGAAGCATGATAAAAAAGAAGAGGTGAACGCTATCCCTAGAAAGAAGCCCACTGCAATTCTAAAACCAGATCTGAAGCCGAAAGGAAACAAGATGAAACGAGGATCCAACAAACAAAACAACCCACAGTCTAGAAGTGCGCCTGGTCATTTAGCTAGAAATTGTAGAAACAGGAGTTGTCCTACAGCGCAGGCGAACCTGATAGAAGATGAATTAGTAGCTATGATATCTGAAGTTAATGTGATGGGGGGTCTGAAGGTTGGTGGCTGGTATTGGAGAAGTAGAACTGAAATTCACATCCGACAAGACGCTTGTGCTGAAGGAAGTTTTGCATACTTCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTTCTCAACAAGGCTGA

Coding sequence (CDS)

ATGACTACTGCAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACTGAGGAAGCGGGGTCGAAGAAGTACAATGTCAATCGATACTTAAGATATCGAATGGAGGATGACAAATCCGTGGAGTCACAGTCACATGAAATCCAGAAAATAGCCCACGAGATTATTAGTGAAGGTATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATAAATTACCTCCATTGTGGAAGGATTTCAAGAACACCTTAAGGCACAAAACCAAGGAGTTCTCACTAGAAAGTCTAATCACGAGGCTAAGGATAGAGGAGGAAGCAAGGAAGCATGATAAAAAAGAAGAGGTGAACGCTATCCCTAGAAAGAAGCCCACTGCAATTCTAAAACCAGATCTGAAGCCGAAAGGAAACAAGATGAAACGAGGATCCAACAAACAAAACAACCCACAGTCTAGAAGTGCGCCTGGTCATTTAGCTAGAAATTGTAGAAACAGGAGTTGTCCTACAGCGCAGGCGAACCTGATAGAAGATGAATTAGTAGCTATGATATCTGAAGTTAATGTGATGGGGGGTCTGAAGGTTGGTGGCTGGTATTGGAGAAGTAGAACTGAAATTCACATCCGACAAGACGCTTGTGCTGAAGGAAGTTTTGCATACTTCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTTCTCAACAAGGCTGA

Protein sequence

MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYWRSRTEIHIRQDACAEGSFAYFRNSKEFGLRISSQQG

Homology

[Close]

BLAST of Pay0022585 vs. ExPASy TrEMBL
Match: A0A5A7VQD4 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00810 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.9e-82
Identity = 168/221 (76.02%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAKEVWD LQKKYDTEEA  KKY +++YLRY+M D+K VE+QSHEIQKIAHEIISEGM
Sbjct: 1   MTTAKEVWDTLQKKYDTEEARLKKYAISQYLRYQMTDEKFVEAQSHEIQKIAHEIISEGM 60

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQV VIIDKLPPLWKDFKNTLRHKTKEF LESLITRL IEEE RKHDKKEEVNAI
Sbjct: 61  PLDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFLLESLITRLMIEEEVRKHDKKEEVNAI 120

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAP----------GHLARNCRNRSCPT 180
           P+KKPT +LK DLKPKGNKMKRGSNKQNNPQS+S            GHLARNCRNRS P 
Sbjct: 121 PKKKPTVVLKSDLKPKGNKMKRGSNKQNNPQSKSTVQIVCYNCNKLGHLARNCRNRSHPV 180

Query: 181 AQANLIEDELVAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           AQANLIE+ELVAMI EVNV+GG +  GW+  +    H+  D
Sbjct: 181 AQANLIENELVAMIFEVNVIGGSE--GWWLDTGAFPHVCHD 219

[Close]

BLAST of Pay0022585 vs. ExPASy TrEMBL
Match: A0A5A7TG34 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00910 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.8e-81
Identity = 168/211 (79.62%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRM DDKS+E+QSHEIQKIAHEIISEGM
Sbjct: 29  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMADDKSMEAQSHEIQKIAHEIISEGM 88

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI
Sbjct: 89  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 148

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDEL 180
           PRKKPT ILKPDLK KGNKMKRG                     NRSCPTAQANLIEDEL
Sbjct: 149 PRKKPTTILKPDLKLKGNKMKRG---------------------NRSCPTAQANLIEDEL 208

Query: 181 VAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           VAMISEVNV+G  +  GW+  +    H+  D
Sbjct: 209 VAMISEVNVIG--ESEGWWLDTGASHHVFHD 216

[Close]

BLAST of Pay0022585 vs. ExPASy TrEMBL
Match: A0A5D3BDS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00230 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 9.6e-74
Identity = 153/211 (72.51%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGM
Sbjct: 90  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGM 149

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LITRL+IEEEA+K DKK+EVNAI
Sbjct: 150 PLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLKIEEEAKKRDKKKEVNAI 209

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDEL 180
           PRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+EL
Sbjct: 210 PRKKFTAVLKSDLKPKGNKMKQGFNKQNNPQS-----------------TSMANLIENEL 269

Query: 181 VAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           VAMISEVNV+GG +  GW+  +    H+  D
Sbjct: 270 VAMISEVNVIGGSE--GWWLDTNASRHVCHD 281

[Close]

BLAST of Pay0022585 vs. ExPASy TrEMBL
Match: A0A5A7UA92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1166G00260 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.6e-73
Identity = 154/211 (72.99%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGM
Sbjct: 90  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGM 149

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L TRLRIEEEA+KHDKKEEVNAI
Sbjct: 150 PLDDQFQVTIIIDKLLLLWKDFKNTLRHKTKEFSLENLTTRLRIEEEAKKHDKKEEVNAI 209

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDEL 180
           PRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+EL
Sbjct: 210 PRKKFTAVLKSDLKPKGNKMKQGFNKQNNPQS-----------------TSMANLIENEL 269

Query: 181 VAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           VAMISEVNV+GG +  GW+  +    H+  D
Sbjct: 270 VAMISEVNVIGGSE--GWWLDTGASRHVCHD 281

[Close]

BLAST of Pay0022585 vs. ExPASy TrEMBL
Match: A0A5A7SXC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00540 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 9.3e-69
Identity = 139/153 (90.85%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAKEVWDALQKKYD EE GSKKYNV+RYL+Y+M DDKSVE+QSHEIQKIAHEIISEGM
Sbjct: 30  MTTAKEVWDALQKKYDIEEVGSKKYNVSRYLKYQMTDDKSVEAQSHEIQKIAHEIISEGM 89

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQ VVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE RKHDKKEEVN I
Sbjct: 90  PLDDQFQ-VVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEVRKHDKKEEVNVI 149

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSR 154
           PRKK +A+LKPDLKPKGNKMKRGSNKQNNPQS+
Sbjct: 150 PRKKSSAVLKPDLKPKGNKMKRGSNKQNNPQSK 181

[Close]

BLAST of Pay0022585 vs. NCBI nr
Match: KAA0067915.1 (putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 4.0e-82
Identity = 168/221 (76.02%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAKEVWD LQKKYDTEEA  KKY +++YLRY+M D+K VE+QSHEIQKIAHEIISEGM
Sbjct: 1   MTTAKEVWDTLQKKYDTEEARLKKYAISQYLRYQMTDEKFVEAQSHEIQKIAHEIISEGM 60

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQV VIIDKLPPLWKDFKNTLRHKTKEF LESLITRL IEEE RKHDKKEEVNAI
Sbjct: 61  PLDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFLLESLITRLMIEEEVRKHDKKEEVNAI 120

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAP----------GHLARNCRNRSCPT 180
           P+KKPT +LK DLKPKGNKMKRGSNKQNNPQS+S            GHLARNCRNRS P 
Sbjct: 121 PKKKPTVVLKSDLKPKGNKMKRGSNKQNNPQSKSTVQIVCYNCNKLGHLARNCRNRSHPV 180

Query: 181 AQANLIEDELVAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           AQANLIE+ELVAMI EVNV+GG +  GW+  +    H+  D
Sbjct: 181 AQANLIENELVAMIFEVNVIGGSE--GWWLDTGAFPHVCHD 219

[Close]

BLAST of Pay0022585 vs. NCBI nr
Match: KAA0042384.1 (pol polyprotein [Cucumis melo var. makuwa] >TYK15502.1 pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 5.8e-81
Identity = 168/211 (79.62%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRM DDKS+E+QSHEIQKIAHEIISEGM
Sbjct: 29  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMADDKSMEAQSHEIQKIAHEIISEGM 88

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI
Sbjct: 89  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 148

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDEL 180
           PRKKPT ILKPDLK KGNKMKRG                     NRSCPTAQANLIEDEL
Sbjct: 149 PRKKPTTILKPDLKLKGNKMKRG---------------------NRSCPTAQANLIEDEL 208

Query: 181 VAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           VAMISEVNV+G  +  GW+  +    H+  D
Sbjct: 209 VAMISEVNVIG--ESEGWWLDTGASHHVFHD 216

[Close]

BLAST of Pay0022585 vs. NCBI nr
Match: TYJ98000.1 (hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 2.0e-73
Identity = 153/211 (72.51%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGM
Sbjct: 90  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGM 149

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LITRL+IEEEA+K DKK+EVNAI
Sbjct: 150 PLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLKIEEEAKKRDKKKEVNAI 209

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDEL 180
           PRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+EL
Sbjct: 210 PRKKFTAVLKSDLKPKGNKMKQGFNKQNNPQS-----------------TSMANLIENEL 269

Query: 181 VAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           VAMISEVNV+GG +  GW+  +    H+  D
Sbjct: 270 VAMISEVNVIGGSE--GWWLDTNASRHVCHD 281

[Close]

BLAST of Pay0022585 vs. NCBI nr
Match: KAA0050409.1 (hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 3.4e-73
Identity = 154/211 (72.99%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGM
Sbjct: 90  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGM 149

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L TRLRIEEEA+KHDKKEEVNAI
Sbjct: 150 PLDDQFQVTIIIDKLLLLWKDFKNTLRHKTKEFSLENLTTRLRIEEEAKKHDKKEEVNAI 209

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDEL 180
           PRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+EL
Sbjct: 210 PRKKFTAVLKSDLKPKGNKMKQGFNKQNNPQS-----------------TSMANLIENEL 269

Query: 181 VAMISEVNVMGGLKVGGWYWRSRTEIHIRQD 212
           VAMISEVNV+GG +  GW+  +    H+  D
Sbjct: 270 VAMISEVNVIGGSE--GWWLDTGASRHVCHD 281

[Close]

BLAST of Pay0022585 vs. NCBI nr
Match: KAA0035842.1 (uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa] >TYK30290.1 uncharacterized protein E5676_scaffold344G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-68
Identity = 139/153 (90.85%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGM 60
           MTTAKEVWDALQKKYD EE GSKKYNV+RYL+Y+M DDKSVE+QSHEIQKIAHEIISEGM
Sbjct: 30  MTTAKEVWDALQKKYDIEEVGSKKYNVSRYLKYQMTDDKSVEAQSHEIQKIAHEIISEGM 89

Query: 61  PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAI 120
           PLDDQFQ VVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE RKHDKKEEVN I
Sbjct: 90  PLDDQFQ-VVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEVRKHDKKEEVNVI 149

Query: 121 PRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSR 154
           PRKK +A+LKPDLKPKGNKMKRGSNKQNNPQS+
Sbjct: 150 PRKKSSAVLKPDLKPKGNKMKRGSNKQNNPQSK 181

[Close]

BLAST of Pay0022585 vs. TAIR 10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 52/174 (29.89%), Postives = 84/174 (48.28%), Query Frame = 0


Query: 4   AKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLD 63
           AKE+WD L+  Y  +E+ SK+  V +Y+ +RM +++ +  Q     KIA  I+S GM LD
Sbjct: 283 AKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLD 342

Query: 64  DQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRK 123
           + F V  II K PP W+ F   L  + +   +  L+ R++ EEE  ++  K     +  +
Sbjct: 343 EAFHVSTIISKFPPSWRGFCTRLMEE-EYLPVWMLMERVKAEEELLRNGAK----GVTYR 402

Query: 124 KPTAILKPDLKPKGNKMKRGSN----KQNNPQ----------SRSAPGHLARNC 164
             T   + +  P      RGS     K+  P+          +    GHLA++C
Sbjct: 403 PATGSSQMERTPSLGTTHRGSQSVGWKRKEPERDERVIIVCDNCGRKGHLAKHC 451

The following BLAST results are available for this feature:

BLAST of Pay0022585 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0022585 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQD4	1.9e-82	76.02	Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138...	[more]
A0A5A7TG34	2.8e-81	79.62	Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G0091...	[more]
A0A5D3BDS3	9.6e-74	72.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UA92	1.6e-73	72.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SXC2	9.3e-69	90.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Pay0022585 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067915.1	4.0e-82	76.02	putative Polyprotein [Cucumis melo var. makuwa]	[more]
KAA0042384.1	5.8e-81	79.62	pol polyprotein [Cucumis melo var. makuwa] >TYK15502.1 pol polyprotein [Cucumis ...	[more]
TYJ98000.1	2.0e-73	72.51	hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]	[more]
KAA0050409.1	3.4e-73	72.99	hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]	[more]
KAA0035842.1	1.9e-68	90.85	uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa] >TYK30...	[more]

BLAST of Pay0022585 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00980.1	5.1e-11	29.89	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 2..111 e-value: 1.6E-20 score: 73.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..158
None	No IPR available	PANTHER	PTHR47592	PBF68 PROTEIN	coord: 2..152
None	No IPR available	PANTHER	PTHR47592:SF14	GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022585.1	Pay0022585.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding