Pay0021786 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021786
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr03: 18988186 .. 18988727 (+)
RNA-Seq Expression	Pay0021786
Synteny	Pay0021786

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTAAACCACATCAACACTCTCACGCTTCTAAATTATTCATCTATCTATCTAAAATTACTTCCTTTTAAGCCATGGGAGGCCACAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAGAAAAGAAGACCATTATGACCACGGTGGCTCATGGCTAGATGATAAGTCGAGATCGGGCAAGGTGTGGCCAAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTCGAATCCGAGCGTCAAACCGTCACTATACCTACCAATGTGTAAATAATGTGTAAATAATTTTTTTTTTGCATATAGTATTAGTTCATTAAACTTAGCTTTGTTTAATTAGATGATACCCTAGAAGAAAACTTTATATCAACACTCAACTAATGTGATGTTGAATCCAGTATTGAAAGAGTGATAATAAAATGTCTTCGTGAAAATTATATATGACTTTGTTCTTTACCC

mRNA sequence

AAACTAAACCACATCAACACTCTCACGCTTCTAAATTATTCATCTATCTATCTAAAATTACTTCCTTTTAAGCCATGGGAGGCCACAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAGAAAAGAAGACCATTATGACCACGGTGGCTCATGGCTAGATGATAAGTCGAGATCGGGCAAGGTGTGGCCAAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTCGAATCCGAGCGTCAAACCGTCACTATACCTACCAATGTGTAAATAATGTGTAAATAATTTTTTTTTTGCATATAGTATTAGTTCATTAAACTTAGCTTTGTTTAATTAGATGATACCCTAGAAGAAAACTTTATATCAACACTCAACTAATGTGATGTTGAATCCAGTATTGAAAGAGTGATAATAAAATGTCTTCGTGAAAATTATATATGACTTTGTTCTTTACCC

Coding sequence (CDS)

ATGGGAGGCCACAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAGAAAAGAAGACCATTATGACCACGGTGGCTCATGGCTAGATGATAAGTCGAGATCGGGCAAGGTGTGGCCAAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTCGAATCCGAGCGTCAAACCGTCACTATACCTACCAATGTGTAA

Protein sequence

MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV

Homology

[Close]

BLAST of Pay0021786 vs. ExPASy TrEMBL
Match: A0A5A7SYN4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00380 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSFFKSKWS+KEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 94
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of Pay0021786 vs. ExPASy TrEMBL
Match: A0A0A0K8V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSF KSKWSRK DHYDHGGSWLD+KSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 94
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of Pay0021786 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS FSFFKS+  RK DHYDHGG+WLD+  RS KVWPSDEDKAHHWVAE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of Pay0021786 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.1e-36
Identity = 76/92 (82.61%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS FSFFKSK  RK DHYDHGG+W D+  RS KVWPSDEDKAHHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of Pay0021786 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.0e-32
Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 2  GGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEP 61
          G ++ KK+H+SFS FSFFKS+  RK DH +H GS LD+  RSGKVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          GIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPN 93

[Close]

BLAST of Pay0021786 vs. NCBI nr
Match: KAA0035006.1 (hypothetical protein E6C27_scaffold57G00470 [Cucumis melo var. makuwa] >TYK02346.1 hypothetical protein E5676_scaffold155G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 6.2e-47
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSFFKSKWS+KEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 94
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of Pay0021786 vs. NCBI nr
Match: KGN45868.1 (hypothetical protein Csa_004803 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 2.6e-45
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSF KSKWSRK DHYDHGGSWLD+KSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 94
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of Pay0021786 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 8.4e-36
Identity = 76/92 (82.61%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS FSFFKSK  RK DHYDHGG+W D+  RS KVWPSDEDKAHHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of Pay0021786 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 2  GGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEP 61
          G ++ KK+H+SFS FSFFKS+  RK DH +H GS LD+  RSGKVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          GIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPN 93

[Close]

BLAST of Pay0021786 vs. NCBI nr
Match: KAG6592311.1 (hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-31
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 2  GGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEP 61
          G ++ KKSHSSFS F+FFK +  RKEDHYDHGG W ++  RSGKVWPSDEDK H WVAEP
Sbjct: 3  GNNRSKKSHSSFSIFNFFKFRKGRKEDHYDHGGYW-NEMPRSGKVWPSDEDKTHRWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          GIDRKAKDYID+IYRNR+FESERQTVT+P N
Sbjct: 63 GIDRKAKDYIDKIYRNRIFESERQTVTLPAN 92

[Close]

BLAST of Pay0021786 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSRKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG     S   FS FSFFK   +R+    +  GSW DD   + K   SDEDK  +WVAE
Sbjct: 1  MGGKNRSHSSKRFSLFSFFK---TRRSHRVEADGSW-DDFGYTRKAMASDEDK-RYWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVT 89
          PGIDRKA  +I + +  RV ESERQT++
Sbjct: 61 PGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]

BLAST of Pay0021786 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 24 SRKEDHY--DHGGSWLDDKSRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFE 83
          +R+  H+  +   SW DD   + K W SDEDK  +WVAEPGIDRKA  +I + + +RV E
Sbjct: 3  ARRSSHHRVEADASW-DDVIYTRKAWASDEDK-RYWVAEPGIDRKASAFIAKFHASRVSE 62

Query: 84 SERQTV 88
          SERQT+
Sbjct: 63 SERQTL 66

The following BLAST results are available for this feature:

BLAST of Pay0021786 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021786 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYN4	3.0e-47	98.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K8V3	1.3e-45	96.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1	[more]
A0A0A0KBW1	1.1e-36	83.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1	[more]
A0A0A0K7Y2	4.1e-36	82.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1	[more]
A0A0A0KAK6	8.0e-32	78.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1	[more]

BLAST of Pay0021786 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035006.1	6.2e-47	98.92	hypothetical protein E6C27_scaffold57G00470 [Cucumis melo var. makuwa] >TYK02346...	[more]
KGN45868.1	2.6e-45	96.77	hypothetical protein Csa_004803 [Cucumis sativus]	[more]
KGN45870.1	8.4e-36	82.61	hypothetical protein Csa_004960 [Cucumis sativus]	[more]
KGN45869.1	1.6e-31	78.02	hypothetical protein Csa_005516 [Cucumis sativus]	[more]
KAG6592311.1	2.2e-31	75.82	hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0021786 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05858.1	3.1e-12	48.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G26620.1	3.2e-09	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33511:SF17	RIBOSOMAL PROTEIN S12	coord: 1..89
None	No IPR available	PANTHER	PTHR33511	OS06G0632400 PROTEIN	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021786.1	Pay0021786.1	mRNA