Pay0021738 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021738
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr02: 2409405 .. 2410405 (-)
RNA-Seq Expression	Pay0021738
Synteny	Pay0021738

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTCTCTGTCCTGATTGTACTCTGTTTTGTCTTCATTCTTTGAAAGCTCTACAGTTTATCTACTTCAATGAATTAAACATAAAAATTCTTCCATCTTTGACTCTAAAAACATCATCTTATTATCAATTTCAATCAATTATGATAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAAAAATACCCACAAAATCCTCTGTTTCTTCTCCAATTTCAGAATCCAAAAATGAGTGATTCTTCTACTTCTACCCCTCATCCTGCAAAATCAAGCTTACCCATGTTGTATTATGGCCTTGTCGTTGTCGGAACGGCCGCGATTGTCTTAGTTCTCTACAATTTCATCGTTATCAAGTGGTGCTCTGACAGCCGCCACCGCCGGCGGATGGCTGTAAGTTATGAGGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCCTTGAGCAGTTTCAAGTTCAAGAAGGTGGCGGCGGCGACGGCGACAGCGGAAGAAGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGTGAAGAGGTTAAGAAATTGCCGAGATGTACGCATACGTTTCATGCTTCTTGTATAGATATGTGGCTTTATTCTCACTCCGATTGCCCGCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGGTGAGCCGACACGAAACCACCACGGCGGAGCAAGACGAGAATTCAGGTCATGTGTTGTTGGAGGTTTGAAACCGAAGATGTTGATAATAATTTTGAAATAGGTGGTTGGATTTGGAAAATTCTGATTCTTTTGTTTTGTGATGATGATGTTTGTTGGGTGGTTCAATTCAAAGGATGAGGATAATGAAGAATTTGTGAAAAAGTTGGAAGGTGTTTTAAATGGGGTATAGTTATTAAGTAGACCCCATTTCGAATATTTGAGAAAGAGTACACCCCAATCACAATTTGTGGTAACTATGTTCCTCCATTATATGCTATGTAATGAAATATTAAATCTTTTT

mRNA sequence

TTTGTTTCTCTGTCCTGATTGTACTCTGTTTTGTCTTCATTCTTTGAAAGCTCTACAGTTTATCTACTTCAATGAATTAAACATAAAAATTCTTCCATCTTTGACTCTAAAAACATCATCTTATTATCAATTTCAATCAATTATGATAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAAAAATACCCACAAAATCCTCTGTTTCTTCTCCAATTTCAGAATCCAAAAATGAGTGATTCTTCTACTTCTACCCCTCATCCTGCAAAATCAAGCTTACCCATGTTGTATTATGGCCTTGTCGTTGTCGGAACGGCCGCGATTGTCTTAGTTCTCTACAATTTCATCGTTATCAAGTGGTGCTCTGACAGCCGCCACCGCCGGCGGATGGCTGTAAGTTATGAGGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCCTTGAGCAGTTTCAAGTTCAAGAAGGTGGCGGCGGCGACGGCGACAGCGGAAGAAGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGTGAAGAGGTTAAGAAATTGCCGAGATGTACGCATACGTTTCATGCTTCTTGTATAGATATGTGGCTTTATTCTCACTCCGATTGCCCGCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGGTGAGCCGACACGAAACCACCACGGCGGAGCAAGACGAGAATTCAGGTCATGTGTTGTTGGAGGTTTGAAACCGAAGATGTTGATAATAATTTTGAAATAGGTGGTTGGATTTGGAAAATTCTGATTCTTTTGTTTTGTGATGATGATGTTTGTTGGGTGGTTCAATTCAAAGGATGAGGATAATGAAGAATTTGTGAAAAAGTTGGAAGGTGTTTTAAATGGGGTATAGTTATTAAGTAGACCCCATTTCGAATATTTGAGAAAGAGTACACCCCAATCACAATTTGTGGTAACTATGTTCCTCCATTATATGCTATGTAATGAAATATTAAATCTTTTT

Coding sequence (CDS)

ATGAGTGATTCTTCTACTTCTACCCCTCATCCTGCAAAATCAAGCTTACCCATGTTGTATTATGGCCTTGTCGTTGTCGGAACGGCCGCGATTGTCTTAGTTCTCTACAATTTCATCGTTATCAAGTGGTGCTCTGACAGCCGCCACCGCCGGCGGATGGCTGTAAGTTATGAGGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCCTTGAGCAGTTTCAAGTTCAAGAAGGTGGCGGCGGCGACGGCGACAGCGGAAGAAGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGTGAAGAGGTTAAGAAATTGCCGAGATGTACGCATACGTTTCATGCTTCTTGTATAGATATGTGGCTTTATTCTCACTCCGATTGCCCGCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGGTGAGCCGACACGAAACCACCACGGCGGAGCAAGACGAGAATTCAGGTCATGTGTTGTTGGAGGTTTGA

Protein sequence

MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV

Homology

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BLAST of Pay0021738 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.8e-16
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 3   DSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMN 62
           DSS+S+     SS   L   L+ + T+A++LV Y  ++ K+C   RH +  +     + +
Sbjct: 46  DSSSSS-----SSFSPLLIALIGILTSALILVSYYTLISKYC--HRHHQTSSSETLNLNH 105

Query: 63  SSRSFQSS----------LSSFKFKKVAAATATAEEG--NGNECAVCLSAFEDGEEVKKL 122
           +   F SS          L+    K +      + +G  +G++C+VCLS FE+ E ++ L
Sbjct: 106 NGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLL 165

Query: 123 PRCTHTFHASCIDMWLYSHSDCPLCRAPVA-----VPGVSRHETTTAEQDENSGH 161
           P+C H FH  CID WL SHS+CPLCRA V         V ++ +       NS H
Sbjct: 166 PKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAH 213

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BLAST of Pay0021738 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 90  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHET 149
           +G EC+VCL+ FE+ E ++ LP+C+H FH +CID WL SH +CPLCRAPV +     H+ 
Sbjct: 131 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQE 190

Query: 150 TTAEQDENS 159
           T      +S
Sbjct: 191 TETNHQPDS 199

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BLAST of Pay0021738 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 58/167 (34.73%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 4   SSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLY-----NFIVIKWCSDSRHRRRMAVSYE 63
           SS+S+P P  +           + T A VL+++      F++++   D R R     S  
Sbjct: 16  SSSSSPSPVSAPAGQAAMTAGGIATVAAVLIVFAALTLAFVLLQCYCDERRRAVTTTSTS 75

Query: 64  EMMNSSRSFQSS----------------LSSFKFKKVAAATATA-------EEGNGNECA 123
                 R  + S                L S      + +TA A       E+ +G ECA
Sbjct: 76  GRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECA 135

Query: 124 VCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVP 143
           VCL+  EDGEE + LPRC H FHA C+DMWL SHS CPLCR  V VP
Sbjct: 136 VCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVVP 182

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BLAST of Pay0021738 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 6.8e-15
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 90  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHE 149
           NG +C++CL  F + E ++ LP+C HTFH  CID WL SHS+CPLCRA + VP   + E
Sbjct: 151 NGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPE 209

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BLAST of Pay0021738 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 84  ATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPG 143
           A AEEG+  ECA+CL+ F DGEE++ LP C H+FH  CID WL S S CP CR  +    
Sbjct: 92  AAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVR 151

Query: 144 VSR--HETTTAEQDENSGH 161
             R  H +T   +D+   H
Sbjct: 152 CDRCGHASTAEMKDQAHRH 170

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BLAST of Pay0021738 vs. ExPASy TrEMBL
Match: A0A5A7UKT6 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001780 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.8e-87
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM 60
           MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM
Sbjct: 1   MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM 60

Query: 61  MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS 120
           MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS
Sbjct: 61  MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS 120

Query: 121 CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV 166
           CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
Sbjct: 121 CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV 165

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BLAST of Pay0021738 vs. ExPASy TrEMBL
Match: A0A1S3BQC4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492354 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.8e-87
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM 60
           MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM
Sbjct: 1   MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM 60

Query: 61  MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS 120
           MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS
Sbjct: 61  MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS 120

Query: 121 CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV 166
           CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
Sbjct: 121 CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV 165

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BLAST of Pay0021738 vs. ExPASy TrEMBL
Match: A0A0A0LWX2 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G595820 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.9e-75
Identity = 154/169 (91.12%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MSDS--STSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYE 60
           MSDS  STSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD+RHRRRMA SYE
Sbjct: 1   MSDSSTSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRRMAGSYE 60

Query: 61  EMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFH 120
           EMMNSSRSFQSSLSSFKFKKVA   A AEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFH
Sbjct: 61  EMMNSSRSFQSSLSSFKFKKVAG--AGAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFH 120

Query: 121 ASCIDMWLYSHSDCPLCRAP--VAVPGVSRHETTTAEQDENSGHVLLEV 166
           ASCIDMWLYSHSDCPLCRAP  VAV G SRHE  TAEQ+ENSGHVLLEV
Sbjct: 121 ASCIDMWLYSHSDCPLCRAPVAVAVAGRSRHE-ATAEQEENSGHVLLEV 166

[Close]

BLAST of Pay0021738 vs. ExPASy TrEMBL
Match: A0A6J1D0Z7 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111016600 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.3e-58
Identity = 129/166 (77.71%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 8   TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR--MAVSYEEMMNSSR 67
           TPHPAKSSLPMLYYGLVVVGTAAIVLV+YNFIVI+WCSD R R    MA SY EMM+SS 
Sbjct: 15  TPHPAKSSLPMLYYGLVVVGTAAIVLVVYNFIVIRWCSDRRGRGSPGMARSYAEMMSSSG 74

Query: 68  SFQSS----LSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHA 127
           SFQSS    LSSF+FKK   AAA    EEGNG ECAVCLSAFEDGEEVKKLPRCTH FHA
Sbjct: 75  SFQSSSRNLLSSFRFKKGTKAAAATAEEEGNGLECAVCLSAFEDGEEVKKLPRCTHMFHA 134

Query: 128 SCIDMWLYSHSDCPLCRAPVAV-PGVSRHETTTAEQDENSGHVLLE 165
            CIDMWLYSHSDCPLCRAPVA+ PG+ +H  T AEQ ENSGH LLE
Sbjct: 135 PCIDMWLYSHSDCPLCRAPVALAPGLCQHH-TAAEQPENSGHGLLE 179

[Close]

BLAST of Pay0021738 vs. ExPASy TrEMBL
Match: A0A6J1JJ05 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485020 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58
Identity = 126/176 (71.59%), Postives = 139/176 (78.98%), Query Frame = 0


Query: 1   MSDSSTS-----TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRR---R 60
           MSDS+++     T HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSD+R  R    
Sbjct: 1   MSDSASNHFSQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  MAVSYEEMMNSSRSFQSS----LSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVK 120
           +A SY EM+NSSRS QSS    L SFKFKK +AA A  EEGNGNEC VCLSAFE+GEEVK
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAVEEEGNGNECVVCLSAFEEGEEVK 120

Query: 121 KLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE 165
           KLPRC H FHA CIDMWL+SH DCPLCRAPVAVPG+S+ + T AEQ  NSGH L E
Sbjct: 121 KLPRCLHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQ-TAAEQQGNSGHGLPE 175

[Close]

BLAST of Pay0021738 vs. NCBI nr
Match: XP_008450904.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo] >KAA0055794.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa] >TYK10045.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 331.6 bits (849), Expect = 3.8e-87
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM 60
           MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM
Sbjct: 1   MSDSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEM 60

Query: 61  MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS 120
           MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS
Sbjct: 61  MNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHAS 120

Query: 121 CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV 166
           CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV
Sbjct: 121 CIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLEV 165

[Close]

BLAST of Pay0021738 vs. NCBI nr
Match: XP_004144121.1 (RING-H2 finger protein ATL39 [Cucumis sativus] >KGN66278.1 hypothetical protein Csa_007702 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 154/169 (91.12%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MSDS--STSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYE 60
           MSDS  STSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD+RHRRRMA SYE
Sbjct: 1   MSDSSTSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRRMAGSYE 60

Query: 61  EMMNSSRSFQSSLSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFH 120
           EMMNSSRSFQSSLSSFKFKKVA   A AEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFH
Sbjct: 61  EMMNSSRSFQSSLSSFKFKKVAG--AGAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFH 120

Query: 121 ASCIDMWLYSHSDCPLCRAP--VAVPGVSRHETTTAEQDENSGHVLLEV 166
           ASCIDMWLYSHSDCPLCRAP  VAV G SRHE  TAEQ+ENSGHVLLEV
Sbjct: 121 ASCIDMWLYSHSDCPLCRAPVAVAVAGRSRHE-ATAEQEENSGHVLLEV 166

[Close]

BLAST of Pay0021738 vs. NCBI nr
Match: XP_038879803.1 (RING-H2 finger protein ATL39-like [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 3.4e-64
Identity = 135/174 (77.59%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 1   MSDSSTS-----TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRR---R 60
           MSDSS++     TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD+RHRR    
Sbjct: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPA 60

Query: 61  MAVSYEEMMNSSRSFQSSLSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKKL 120
           +A SY EMMNSSRSF SSL SFKFKK    AA A  EEG GNECAVCLSAFEDG+EVKKL
Sbjct: 61  LAGSYAEMMNSSRSFHSSLCSFKFKKGSTVAAAAAEEEGYGNECAVCLSAFEDGDEVKKL 120

Query: 121 PRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE 165
           PRCTH FHASCIDMWL+SHSDCPLCRAPV   G+S+H+   AEQ+ENSGH LLE
Sbjct: 121 PRCTHMFHASCIDMWLFSHSDCPLCRAPVVAQGLSQHQ-AMAEQEENSGHGLLE 173

[Close]

BLAST of Pay0021738 vs. NCBI nr
Match: XP_022147740.1 (E3 ubiquitin-protein ligase EL5-like [Momordica charantia])

HSP 1 Score: 235.0 bits (598), Expect = 4.8e-58
Identity = 129/166 (77.71%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 8   TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRR--MAVSYEEMMNSSR 67
           TPHPAKSSLPMLYYGLVVVGTAAIVLV+YNFIVI+WCSD R R    MA SY EMM+SS 
Sbjct: 15  TPHPAKSSLPMLYYGLVVVGTAAIVLVVYNFIVIRWCSDRRGRGSPGMARSYAEMMSSSG 74

Query: 68  SFQSS----LSSFKFKK--VAAATATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHA 127
           SFQSS    LSSF+FKK   AAA    EEGNG ECAVCLSAFEDGEEVKKLPRCTH FHA
Sbjct: 75  SFQSSSRNLLSSFRFKKGTKAAAATAEEEGNGLECAVCLSAFEDGEEVKKLPRCTHMFHA 134

Query: 128 SCIDMWLYSHSDCPLCRAPVAV-PGVSRHETTTAEQDENSGHVLLE 165
            CIDMWLYSHSDCPLCRAPVA+ PG+ +H  T AEQ ENSGH LLE
Sbjct: 135 PCIDMWLYSHSDCPLCRAPVALAPGLCQHH-TAAEQPENSGHGLLE 179

[Close]

BLAST of Pay0021738 vs. NCBI nr
Match: XP_022987479.1 (E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 126/176 (71.59%), Postives = 139/176 (78.98%), Query Frame = 0


Query: 1   MSDSSTS-----TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRR---R 60
           MSDS+++     T HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSD+R  R    
Sbjct: 1   MSDSASNHFSQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  MAVSYEEMMNSSRSFQSS----LSSFKFKKVAAATATAEEGNGNECAVCLSAFEDGEEVK 120
           +A SY EM+NSSRS QSS    L SFKFKK +AA A  EEGNGNEC VCLSAFE+GEEVK
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAVEEEGNGNECVVCLSAFEEGEEVK 120

Query: 121 KLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE 165
           KLPRC H FHA CIDMWL+SH DCPLCRAPVAVPG+S+ + T AEQ  NSGH L E
Sbjct: 121 KLPRCLHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQ-TAAEQQGNSGHGLPE 175

[Close]

BLAST of Pay0021738 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 3   DSSTSTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRRRMAVSYEEMMN 62
           DSS+S+     SS   L   L+ + T+A++LV Y  ++ K+C   RH +  +     + +
Sbjct: 46  DSSSSS-----SSFSPLLIALIGILTSALILVSYYTLISKYC--HRHHQTSSSETLNLNH 105

Query: 63  SSRSFQSS----------LSSFKFKKVAAATATAEEG--NGNECAVCLSAFEDGEEVKKL 122
           +   F SS          L+    K +      + +G  +G++C+VCLS FE+ E ++ L
Sbjct: 106 NGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLL 165

Query: 123 PRCTHTFHASCIDMWLYSHSDCPLCRAPVA-----VPGVSRHETTTAEQDENSGH 161
           P+C H FH  CID WL SHS+CPLCRA V         V ++ +       NS H
Sbjct: 166 PKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAH 213

[Close]

BLAST of Pay0021738 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 90  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHET 149
           +G EC+VCL+ FE+ E ++ LP+C+H FH +CID WL SH +CPLCRAPV +     H+ 
Sbjct: 131 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQE 190

Query: 150 TTAEQDENS 159
           T      +S
Sbjct: 191 TETNHQPDS 199

[Close]

BLAST of Pay0021738 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-16
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 90  NGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHE 149
           NG +C++CL  F + E ++ LP+C HTFH  CID WL SHS+CPLCRA + VP   + E
Sbjct: 151 NGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPE 209

[Close]

BLAST of Pay0021738 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 81.3 bits (199), Expect = 8.2e-16
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 84  ATAEEGNGNECAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPG 143
           A AEEG+  ECA+CL+ F DGEE++ LP C H+FH  CID WL S S CP CR  +    
Sbjct: 92  AAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVR 151

Query: 144 VSR--HETTTAEQDENSGH 161
             R  H +T   +D+   H
Sbjct: 152 CDRCGHASTAEMKDQAHRH 170

[Close]

BLAST of Pay0021738 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 5.3e-15
Identity = 57/180 (31.67%), Postives = 83/180 (46.11%), Query Frame = 0


Query: 2   SDSSTSTPHPAKSS----LPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD------SRHRR 61
           S + TS   P  SS     P+L   ++ +   A +LV Y   VIK C +       R RR
Sbjct: 23  STTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRR 82

Query: 62  RMAVSYEEMMNSSRSFQSSLSS--------FKFKKVAAATATAEEG-NGNECAVCLSAFE 121
           R +     M+ S       L          FKFKK        ++  N  EC+VCL+ F+
Sbjct: 83  RSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQ 142

Query: 122 DGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQD--ENSGH 161
           + E+++ +P C H FH  CID+WL  +++CPLCR  V+       +  +A     ENS H
Sbjct: 143 EDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPH 202

The following BLAST results are available for this feature:

BLAST of Pay0021738 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	2.8e-16	32.57	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LX93	2.3e-15	47.83	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q9LRB7	3.1e-15	34.73	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
P0C041	6.8e-15	52.54	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
O22755	1.2e-14	46.84	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]

BLAST of Pay0021738 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKT6	1.8e-87	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BQC4	1.8e-87	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492354 PE=3 ...	[more]
A0A0A0LWX2	7.9e-75	91.12	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G595820 PE...	[more]
A0A6J1D0Z7	2.3e-58	77.71	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101660...	[more]
A0A6J1JJ05	6.7e-58	71.59	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485020 P...	[more]

BLAST of Pay0021738 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450904.1	3.8e-87	100.00	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo] >KAA0055794.1 RING-H...	[more]
XP_004144121.1	1.6e-74	91.12	RING-H2 finger protein ATL39 [Cucumis sativus] >KGN66278.1 hypothetical protein ...	[more]
XP_038879803.1	3.4e-64	77.59	RING-H2 finger protein ATL39-like [Benincasa hispida]	[more]
XP_022147740.1	4.8e-58	77.71	E3 ubiquitin-protein ligase EL5-like [Momordica charantia]	[more]
XP_022987479.1	1.4e-57	71.59	E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima]	[more]

BLAST of Pay0021738 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	2.0e-17	32.57	RING/U-box superfamily protein	[more]
AT5G10380.1	1.7e-16	47.83	RING/U-box superfamily protein	[more]
AT4G17905.1	4.8e-16	52.54	RING/U-box superfamily protein	[more]
AT2G17450.1	8.2e-16	46.84	RING-H2 finger A3A	[more]
AT1G04360.1	5.3e-15	31.67	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 94..135 e-value: 3.2E-6 score: 36.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 92..136 e-value: 1.2E-13 score: 51.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 94..136 score: 12.312242
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 48..141 e-value: 6.3E-22 score: 79.1
None	No IPR available	PANTHER	PTHR45676:SF84	RING-H2 FINGER PROTEIN ATL52-LIKE	coord: 5..163
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 93..136 e-value: 1.82344E-18 score: 72.3427
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 93..142
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 5..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021738.1	Pay0021738.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane