Pay0021324 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021324
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr02: 7989271 .. 7991851 (-)
RNA-Seq Expression	Pay0021324
Synteny	Pay0021324

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTAAAAACTTTGTGCAACCAGCGATTCCTCGTTTCGATGGTCATTACGATCATTTAAAAATGTTGATGGAGAATTTTCTGAGATCAAAAGAATATTGGGAAGTTGTGTCTGATGGAATGCCAGAAATAACAGCTGCAATGACAGATGAACAAAAGACTGAAGTTGAAGGAACGAAATTGAAGGATCTGAAGGCCAAAAATTACTTGTTTCAGGCTATTGATCGTTCAATCTTGGAGACAATTCTTTACAAAGATACCTCCAAGCAGATTTGGGATTCAATGAAGAATAAATATGAAGGCTCGGCAAAAGCAAAGAGGCAGCAACTTAAAACACTATGTACCGAGTTTGAAAACCTTAAGATGAAGTCCGGTGAGTCGATTGCTATTTATTTCTCACGAGTCATGGAAATCACCAACAAAATGCGGATGTTCAGGGACAAGTCAGAGGATATCATCATCATTGAGAAGATATTTAGATCCTTAACACCAAAATTCAATTTTGTTGTTTGTGCAATTGAAGAGTCTAAGAATATTGATGATCTCTCACTTGATGAGCTGCAAAGTTCTTTACTAGTACATGAACGGAAGCTCAAGCAACAAGACAATGAGGAGCAAGCTTTGAAAGCTTCAATAGAAACTCCATCGTCGTCAAAAGGAGGTAGAGGCAGAGGTAAAGAGAAGAAAAGAAACAACCAACGGAATTAGCAGCAACATCAGCCACGATACAGTCAATCTCAAGGAAGAGGAACAGGACAGGGACGAGGAGGCCATAACTCAGAAAGTCATTAACGGAAGTCGGTAGACAAGTCAAATGTTGAATGTTATAGGTGCCACAAGTATGGTTATTATCAGTCAGAATGTCGAACTAATTTGAATAAGCAAAATAGGGAAGAATCAACTAATTTTGCAGAACAAAAGGAAGAGGTTTTTCTTTTGATGGTGTGTCATGTGAATGAAGAATCAAAACCAAATTTGTGATACTTAGACATTGGCTACAGTAATCACGTGTGTGGTGATAAGGGAGTTTTTTGCGAACTAGACGAAACCTTTCGCAACACCGTCAAGTTTGGTAATAACTCCATGGTATTTGTTATAGGGAAAGGAAAAATCACTCTCCAAACCAAAGGTGATATCATCCATACTATTTCAAATGACCTCTTTATTCCAGATTTGAAGACCAACTTACTAAGTGTGGGTCAATTGCAAGAGAAGGGATATGAGATCTTCATAAAAAATGGTGTATGCAGAGTTCATGATAAAGAATTAGGCTTGATCGCTTAGGTGAACATGATATCGAACCGAATGTTTCTGCTTTATCTCCAGAGCCTCACTCATTCATGTTTTTCAGCAAAGGTGAAGGATGAGGCATGGCTAATGCATTTACGCTATGGACATCTAAATTTTAGTGGACTCAAAACATTGCAGCAGAAAAATATGGTGACACGATTAAAAGTCATTCTGAGATTTGTGAAGATTGTGTGGTTGGGAAACAACACAGAGATAGTTTTCCAACAGGAAAATCATGGAGAGCAAAGCATGTTTTTGAGCTTATTCACTCTGATCTTTGTGGACCCATAAATCCGACATCAAATGGTCATAACGTTACTTTGTAACATTCATTGAGGATTATAGTCGAAAAACATGGGTTTACTTTTTGCAAGAAAAATCTGAAACTTTTTCAGTTTTTAAAAGCTTCAAAGCAAAGGTTGAAAAGGAAGCAGGCATGGCAATAAAGATTCTTCATAGTGATCGTGGATGTGAGTACAACTCGCAAGAATTTGAAAATTTTTATGAGGAGCATGACATTAAAAGGCAACTTACAACAGCATATACGCCACAACAAAATGACATTTCAGAGAGGAAAAATCGCACAATCATGAACATGGTACGGTGTCTATTAAAGAGTAGTGAAGTTCAGAAAACTAGTTGGCCTGAAGCTGTCAATTGGAGTATCCATGTGCTGAATAGAAGTCCCACATTTGCTGTTCAGAATCAGACACCAGAAGAAGCTTGGAGTGGACAAAAACCAAATATAGATCATTTTAGAATTTTTGGCTACATAGCATATGCACATGTTCCAAACAAAGAGGAGTAAACTTGACGACAAAGGAGAAAATACATTTTTCTCAGTGTTTGTGAGCAATCAAAGGCGTACAAACTGTACAATCCAATCACCAAGAAAATTGTCATCAGCCATAATGTTGTTTTCAATGAAGCAGAATTCTGGAATCATGAAGAATGCAAGCCTGACCAGAGAATCCAGGTTGATTTTGAAAATGGAGATGAAGGGACAAGGCAACAAATTGAAACAAATGATGAAGCAACTATCACTCAAGAAATTCCAGCTGTCAGTGGCGTAGAAAGAGCTCATCGAGTCAAAAGAAAGCCTGCTTGGATGGAAGACTATGTGGTAACTGGAATGGATCATTCTGATGATCCAGTTGTTCATTTTGCTTTGTTTGCAGATTGTGATCCAGTAACCTTTGAAGAAGCTGTCCAAAAACCGAAATGGCAAAAGACAATGAATGATGAGATAGCAGCAATTGAAAGAAACAACAGCTGGGGAATTGACTGA

mRNA sequence

ATGGCCTCTAAAAACTTTGTGCAACCAGCGATTCCTCGTTTCGATGGTCATTACGATCATTTAAAAATGTTGATGGAGAATTTTCTGAGATCAAAAGAATATTGGGAAGTTGTGTCTGATGGAATGCCAGAAATAACAGCTGCAATGACAGATGAACAAAAGACTGAAGTTGAAGGAACGAAATTGAAGGATCTGAAGGCCAAAAATTACTTGTTTCAGGCTATTGATCGTTCAATCTTGGAGACAATTCTTTACAAAGATACCTCCAAGCAGATTTGGGATTCAATGAAGAATAAATATGAAGGCTCGGCAAAAGCAAAGAGGCAGCAACTTAAAACACTATGTACCGAGTTTGAAAACCTTAAGATGAAGTCCGGTGAGTCGATTGCTATTTATTTCTCACGAGTCATGGAAATCACCAACAAAATGCGGATGTTCAGGGACAAGTCAGAGGATATCATCATCATTGAGAAGATATTTAGATCCTTAACACCAAAATTCAATTTTGTTGTTTGTGCAATTGAAGAGTCTAAGAATATTGATGATCTCTCACTTGATGAGCTGCAAAGTTCTTTACTAGTACATGAACGGAAGCTCAAGCAACAAGACAATGAGGAGCAAGCTTTGAAAGCTTCAATAGAAACTCCATCGTCGTCAAAAGGAGGTAGAGGCAGAGGGAAAGGAAAAATCACTCTCCAAACCAAAGGTGATATCATCCATACTATTTCAAATGACCTCTTTATTCCAGATTTGAAGACCAACTTACTAAGTGTGGGTCAATTGCAAGAGAAGGGATATGAGATCTTCATAAAAAATGGTTGGACTCAAAACATTGCAGCAGAAAAATATGGTGACACGATTAAAAGTCATTCTGAGATTTGTGAAGATTGTGTGGTTGGGAAACAACACAGAGATAGTTTTCCAACAGGAAAATCATGGAGAGCAAAGCATGTTTTTGAGCTTATTCACTCTGATCTTTGTGGACCCATAAATCCGACATCAAATGTTTTTAAAAGCTTCAAAGCAAAGGTTGAAAAGGAAGCAGGCATGGCAATAAAGATTCTTCATAGTGATCGTGGATGTGAGTACAACTCGCAAGAATTTGAAAATTTTTATGAGGAGCATGACATTAAAAGGCAACTTACAACAGCATATACGCCACAACAAAATGACATTTCAGAGAGGAAAAATCGCACAATCATGAACATGGTACGGTGTCTATTAAAGAGTAGTGAAGTTCAGAAAACTAGTTGGCCTGAAGCTGTCAATTGGAGTATCCATGTGCTGAATAGAAGTCCCACATTTGCTGTTCAGAATCAGACACCAGAAGAAGCTTGGAGTGGACAAAAACCAAATATAGATCATTTTAGAATTTTTGGCTACATAGCATATGCACATGTTCCAAACAAAGAGGACCATAATGTTGTTTTCAATGAAGCAGAATTCTGGAATCATGAAGAATGCAAGCCTGACCAGAGAATCCAGGTTGATTTTGAAAATGGAGATGAAGGGACAAGGCAACAAATTGAAACAAATGATGAAGCAACTATCACTCAAGAAATTCCAGCTGTCAGTGGCGTAGAAAGAGCTCATCGAGTCAAAAGAAAGCCTGCTTGGATGGAAGACTATGTGGTAACTGGAATGGATCATTCTGATGATCCAGTTGTTCATTTTGCTTTGTTTGCAGATTGTGATCCAGTAACCTTTGAAGAAGCTGTCCAAAAACCGAAATGGCAAAAGACAATGAATGATGAGATAGCAGCAATTGAAAGAAACAACAGCTGGGGAATTGACTGA

Coding sequence (CDS)

ATGGCCTCTAAAAACTTTGTGCAACCAGCGATTCCTCGTTTCGATGGTCATTACGATCATTTAAAAATGTTGATGGAGAATTTTCTGAGATCAAAAGAATATTGGGAAGTTGTGTCTGATGGAATGCCAGAAATAACAGCTGCAATGACAGATGAACAAAAGACTGAAGTTGAAGGAACGAAATTGAAGGATCTGAAGGCCAAAAATTACTTGTTTCAGGCTATTGATCGTTCAATCTTGGAGACAATTCTTTACAAAGATACCTCCAAGCAGATTTGGGATTCAATGAAGAATAAATATGAAGGCTCGGCAAAAGCAAAGAGGCAGCAACTTAAAACACTATGTACCGAGTTTGAAAACCTTAAGATGAAGTCCGGTGAGTCGATTGCTATTTATTTCTCACGAGTCATGGAAATCACCAACAAAATGCGGATGTTCAGGGACAAGTCAGAGGATATCATCATCATTGAGAAGATATTTAGATCCTTAACACCAAAATTCAATTTTGTTGTTTGTGCAATTGAAGAGTCTAAGAATATTGATGATCTCTCACTTGATGAGCTGCAAAGTTCTTTACTAGTACATGAACGGAAGCTCAAGCAACAAGACAATGAGGAGCAAGCTTTGAAAGCTTCAATAGAAACTCCATCGTCGTCAAAAGGAGGTAGAGGCAGAGGGAAAGGAAAAATCACTCTCCAAACCAAAGGTGATATCATCCATACTATTTCAAATGACCTCTTTATTCCAGATTTGAAGACCAACTTACTAAGTGTGGGTCAATTGCAAGAGAAGGGATATGAGATCTTCATAAAAAATGGTTGGACTCAAAACATTGCAGCAGAAAAATATGGTGACACGATTAAAAGTCATTCTGAGATTTGTGAAGATTGTGTGGTTGGGAAACAACACAGAGATAGTTTTCCAACAGGAAAATCATGGAGAGCAAAGCATGTTTTTGAGCTTATTCACTCTGATCTTTGTGGACCCATAAATCCGACATCAAATGTTTTTAAAAGCTTCAAAGCAAAGGTTGAAAAGGAAGCAGGCATGGCAATAAAGATTCTTCATAGTGATCGTGGATGTGAGTACAACTCGCAAGAATTTGAAAATTTTTATGAGGAGCATGACATTAAAAGGCAACTTACAACAGCATATACGCCACAACAAAATGACATTTCAGAGAGGAAAAATCGCACAATCATGAACATGGTACGGTGTCTATTAAAGAGTAGTGAAGTTCAGAAAACTAGTTGGCCTGAAGCTGTCAATTGGAGTATCCATGTGCTGAATAGAAGTCCCACATTTGCTGTTCAGAATCAGACACCAGAAGAAGCTTGGAGTGGACAAAAACCAAATATAGATCATTTTAGAATTTTTGGCTACATAGCATATGCACATGTTCCAAACAAAGAGGACCATAATGTTGTTTTCAATGAAGCAGAATTCTGGAATCATGAAGAATGCAAGCCTGACCAGAGAATCCAGGTTGATTTTGAAAATGGAGATGAAGGGACAAGGCAACAAATTGAAACAAATGATGAAGCAACTATCACTCAAGAAATTCCAGCTGTCAGTGGCGTAGAAAGAGCTCATCGAGTCAAAAGAAAGCCTGCTTGGATGGAAGACTATGTGGTAACTGGAATGGATCATTCTGATGATCCAGTTGTTCATTTTGCTTTGTTTGCAGATTGTGATCCAGTAACCTTTGAAGAAGCTGTCCAAAAACCGAAATGGCAAAAGACAATGAATGATGAGATAGCAGCAATTGAAAGAAACAACAGCTGGGGAATTGACTGA

Protein sequence

MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNIDDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIHTISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEAEFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWMEDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID

Homology

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BLAST of Pay0021324 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 5.1e-36
Identity = 83/244 (34.02%), Postives = 132/244 (54.10%), Query Frame = 0


Query: 258 VGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVGKQHRDSFPTGKSWRAKH 317
           +G + EKG +I  K    +++ +   G T+K     C+ C+ GKQHR SF T  S R  +
Sbjct: 429 MGHMSEKGLQILAK----KSLISYAKGTTVKP----CDYCLFGKQHRVSFQT-SSERKLN 488

Query: 318 VFELIHSDLCGPINPTS------------------------------NVFKSFKAKVEKE 377
           + +L++SD+CGP+   S                               VF+ F A VE+E
Sbjct: 489 ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 548

Query: 378 AGMAIKILHSDRGCEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCL 437
            G  +K L SD G EY S+EFE +   H I+ + T   TPQ N ++ER NRTI+  VR +
Sbjct: 549 TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 608

Query: 438 LKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHV 472
           L+ +++ K+ W EAV  + +++NRSP+  +  + PE  W+ ++ +  H ++FG  A+AHV
Sbjct: 609 LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHV 663

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BLAST of Pay0021324 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-16
Identity = 59/200 (29.50%), Postives = 91/200 (45.50%), Query Frame = 0


Query: 294 CEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCG------------------------- 353
           C DC + K H+  F       +K + E I+SD+                           
Sbjct: 479 CSDCFINKSHKVPFSNSTITSSKPL-EYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWL 538

Query: 354 -PINPTSNV---FKSFKAKVEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIKRQLTTA 413
            P+   S V   F  FK+ VE      I  L+SD G E+      ++  +H I    +  
Sbjct: 539 YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPP 598

Query: 414 YTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEE 465
           +TP+ N +SERK+R I+ M   LL  + V KT WP A + +++++NR PT  +Q Q+P +
Sbjct: 599 HTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQ 658

[Close]

BLAST of Pay0021324 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 7.2e-14
Identity = 54/211 (25.59%), Postives = 92/211 (43.60%), Query Frame = 0


Query: 294 CEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCG------------------------- 353
           C DC++ K ++  F +  +  +    E I+SD+                           
Sbjct: 500 CSDCLINKSNKVPF-SQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWL 559

Query: 354 -PINPTSNV---FKSFKAKVEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIKRQLTTA 413
            P+   S V   F +FK  +E      I   +SD G E+ +     ++ +H I    +  
Sbjct: 560 YPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFSQHGISHLTSPP 619

Query: 414 YTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEE 473
           +TP+ N +SERK+R I+     LL  + + KT WP A   +++++NR PT  +Q ++P +
Sbjct: 620 HTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 679

Query: 474 AWSGQKPNIDHFRIFGYIAYAHVPNKEDHNV 476
              G  PN D  R+FG   Y  +     H +
Sbjct: 680 KLFGTSPNYDKLRVFGCACYPWLRPYNQHKL 707

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BLAST of Pay0021324 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-08
Identity = 43/172 (25.00%), Postives = 71/172 (41.28%), Query Frame = 0


Query: 294 CEDCVVGKQHRDSFPTG---KSWRAKHVFELIHSDLCGPIN--PTS-------------- 353
           C DC++GK  +     G   K   +   F+ +H+D+ GP++  P S              
Sbjct: 633 CPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTR 692

Query: 354 ----------------NVFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIK 413
                           NVF S  A ++ +    + ++  DRG EY ++    F+    I 
Sbjct: 693 FQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGIT 752

Query: 414 RQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHVLN 431
              TT    + + ++ER NRT++N  R LL  S +    W  AV +S  + N
Sbjct: 753 ACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRN 804

[Close]

BLAST of Pay0021324 vs. ExPASy Swiss-Prot
Match: P25384 (Transposon Ty2-C Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-C PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-08
Identity = 43/172 (25.00%), Postives = 71/172 (41.28%), Query Frame = 0


Query: 294 CEDCVVGKQHRDSFPTG---KSWRAKHVFELIHSDLCGPIN--PTS-------------- 353
           C DC++GK  +     G   K   +   F+ +H+D+ GP++  P S              
Sbjct: 633 CPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTR 692

Query: 354 ----------------NVFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIK 413
                           NVF S  A ++ +    + ++  DRG EY ++    F+    I 
Sbjct: 693 FQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGIT 752

Query: 414 RQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHVLN 431
              TT    + + ++ER NRT++N  R LL  S +    W  AV +S  + N
Sbjct: 753 ACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRN 804

[Close]

BLAST of Pay0021324 vs. ExPASy TrEMBL
Match: A0A1S4DY17 (uncharacterized protein LOC107991076 OS=Cucumis melo OX=3656 GN=LOC107991076 PE=4 SV=1)

HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGT 60
           MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGT
Sbjct: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGT 60

Query: 61  KLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFEN 120
           KLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFEN
Sbjct: 61  KLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFEN 120

Query: 121 LKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNI 180
           LKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNI
Sbjct: 121 LKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNI 180

Query: 181 DDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIH 240
           DDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIH
Sbjct: 181 DDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIH 240

Query: 241 TISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVG 300
           TISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVG
Sbjct: 241 TISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVG 300

Query: 301 KQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRG 360
           KQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRG
Sbjct: 301 KQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRG 360

Query: 361 CEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPE 420
           CEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPE
Sbjct: 361 CEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPE 420

Query: 421 AVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEA 480
           AVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEA
Sbjct: 421 AVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEA 480

Query: 481 EFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWM 540
           EFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWM
Sbjct: 481 EFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWM 540

Query: 541 EDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID 599
           EDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID
Sbjct: 541 EDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID 598

[Close]

BLAST of Pay0021324 vs. ExPASy TrEMBL
Match: A0A438I5N6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1909 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.8e-185
Identity = 389/881 (44.15%), Postives = 475/881 (53.92%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEIT--AAMTDEQKTEVE 60
           MAS+ FVQPAIPRFDGHYDH  MLMENFLRSKEYW VVS+G+ E T  A MT  Q+TE++
Sbjct: 1   MASETFVQPAIPRFDGHYDHWNMLMENFLRSKEYWHVVSEGITEPTDNATMTQAQRTELD 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKNYLFQAIDRSILETIL KDTSK IWDSMK KY+GSA+AKRQQL+ L TEF
Sbjct: 61  GQRLKDLKAKNYLFQAIDRSILETILCKDTSKHIWDSMKKKYQGSARAKRQQLQALHTEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+M+SGES+  YFSR M I NKMR+  DK+ED+ I+EKI RS+TP FNFVVC+IEES 
Sbjct: 121 ETLRMRSGESVTDYFSRTMAIVNKMRIHGDKTEDVTIVEKILRSMTPAFNFVVCSIEESH 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGK----------- 240
           +ID+LS+DELQSSLLVHERK  QQ+ EEQALKAS E   +++G RGRG+           
Sbjct: 181 DIDELSIDELQSSLLVHERKFNQQEKEEQALKASTENHLATRGDRGRGRSRGRGRGNYDR 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 GNQHQHQRQDNRFQGRGQGGNYSTTYKSRSTDKSNVECYRCHRYGHYKSECRTNMNKQGG 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 ERTNFAEKEEEVSLLMACHANQGTHPNLWYIDTGCSNHMCGDKSAFSDLDETFRNSVTFG 360

Query: 361 --GKITLQTKGDI-IHT-------ISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNG---- 420
              K+++  KG + IH+       ISN  F+PDLKTNLLSVGQLQEKGYEIFIK+G    
Sbjct: 361 DNSKVSVMGKGSVRIHSKEKSDQIISNVFFVPDLKTNLLSVGQLQEKGYEIFIKDGVCRI 420

Query: 421 -------------------------WTQNIAAEKYGD----------------------- 480
                                     TQN  + K  D                       
Sbjct: 421 QDEKLGLIAQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQK 480

Query: 481 -------TIKSHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSN--- 540
                   I++ S+ICE+CVVGKQHR  FP GKSWRA  V EL+HSD+CGPINPTSN   
Sbjct: 481 NMVTGLPPIQTPSQICEECVVGKQHRYQFPKGKSWRANKVLELVHSDICGPINPTSNGGK 540

Query: 541 ---------------------------VFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEF 596
                                       FKSFK  VEKEAG  IKI  SDRG EY SQEF
Sbjct: 541 HYFITFIDDYSRKTWVYFLQEKSEAFSTFKSFKMLVEKEAGKPIKIFCSDRGGEYTSQEF 600

[Close]

BLAST of Pay0021324 vs. ExPASy TrEMBL
Match: A5AFP3 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_023209 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 2.5e-171
Identity = 355/752 (47.21%), Postives = 439/752 (58.38%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGM--PEITAAMTDEQKTEVE 60
           MAS+NFVQPAIPRFDGHYD+  MLMENFLRSKEYW+VVS G+  P   + MTD QKTE+E
Sbjct: 1   MASENFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIE 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKN LFQ IDRSILETIL KDTS+QIWDSMK KY+GS + KRQ L+ L +EF
Sbjct: 61  GQRLKDLKAKNXLFQXIDRSILETILCKDTSQQIWDSMKKKYQGSTRTKRQXLQALRSEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+MK GES++ YFSR M I NKMR+  +K ED+ +IEKI  S+TPKFN+VVC+IEESK
Sbjct: 121 ETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILXSMTPKFNYVVCSIEESK 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKA------------------------SIE 240
           ++D+LS+DELQ SLLVHE+K+ Q+D EEQALKA                         + 
Sbjct: 181 DLDELSIDELQGSLLVHEQKIIQEDKEEQALKAXTNNNALTMNRSXDRGRGKGRGVRGVX 240

Query: 241 TPSSSKGGRGR------------------------------------------------- 300
                +GGRG                                                  
Sbjct: 241 DGGRGRGGRGNFRVDEDQPDFQNRGRGXNQQFDKSKAKVWYVDTGCNNHMCGMSFGDCST 300

Query: 301 ----GKGKITLQTKGDIIHTISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNG-------- 360
               GKG I ++TK   + TISN  ++PDLK+NL S GQL EKGY I I+ G        
Sbjct: 301 VNVMGKGDINIRTKNGFVETISNVFYVPDLKSNLXSAGQLXEKGYIITIQKGACEIYDPS 360

Query: 361 ------------------------------------WTQNIAAEKYG------------- 420
                                               W        +G             
Sbjct: 361 RGAIXVVQMASNRLFPLKIDSVQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTG 420

Query: 421 -DTIKSHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAK 480
              I   S++CE+CVVGKQHR  FP GKS RAK+V EL  S+         + FKSFKA+
Sbjct: 421 LPQISIPSQVCEECVVGKQHRSQFPQGKSRRAKNVLELEKSE-------AFSAFKSFKAR 480

Query: 481 VEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNM 540
           VEKE G +IKIL +DRG EY S EFE+F ++  I+R+LT AYTPQQN +SERKNRTI+NM
Sbjct: 481 VEKETGRSIKILRTDRGGEYCSNEFEHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNM 540

Query: 541 VRCLLKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIA 596
           VR LL   ++ K+ WPEAVNWSIHVLNRSPTF VQN TPEEAWSG KP +DHF+IFG IA
Sbjct: 541 VRSLLARGKIPKSFWPEAVNWSIHVLNRSPTFXVQNMTPEEAWSGXKPAVDHFKIFGCIA 600

[Close]

BLAST of Pay0021324 vs. ExPASy TrEMBL
Match: A5BGM4 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_023111 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160
Identity = 347/802 (43.27%), Postives = 439/802 (54.74%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGM--PEITAAMTDEQKTEVE 60
           MAS+NFVQPAIPRFDGHYD+  MLMENFLRSKEYW+VVS G+  P   + MTD QKTE+E
Sbjct: 1   MASENFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIE 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKNYLFQAIDRSILETIL KDTS+QIWDSMK KY+GS + KRQQL+ L +EF
Sbjct: 61  GQRLKDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYQGSMRTKRQQLQALRSEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+MK GES++ YFSR M I NKMR+  +K ED+ +IEKI RS+TPKFN+VVC+IEESK
Sbjct: 121 ETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEESK 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSS------------------- 240
           ++D+LS+DELQ SLLVHE+K+ Q+D EEQALKAS    + +                   
Sbjct: 181 DLDELSIDELQGSLLVHEQKIIQEDKEEQALKASTNNNALTMNRSADRGRGKGRGVRGVR 240

Query: 241 KGGRGR------------------------------------------------------ 300
            GGRGR                                                      
Sbjct: 241 DGGRGRNQQFDKSKVEXFRCHKFXHYRSECYTKLPNDKEKGEKSNYAEKKEVETLLMAAQ 300

Query: 301 ---------------------------------------GKGKITLQTKGDIIHTISNDL 360
                                                  GKG I ++TK   + TIS   
Sbjct: 301 VNEQPQAEVWYVDTGCSNHMCGSFRSTVSFGDCSTVNVMGKGDINIRTKNGFVETISYVF 360

Query: 361 FIPDLKTNLLSVGQLQEKGYEIFIKNG--------------------------------- 420
           ++PDLK+NLLS GQLQEKGY I I+ G                                 
Sbjct: 361 YVPDLKSNLLSAGQLQEKGYIITIQKGACEIYDPSRGAIDVVQMASNRLFPLKIDSVQSF 420

Query: 421 -----------WTQNIAAEKYG--------------DTIKSHSEICEDCVVGKQHRDSFP 480
                      W        +G                I   S++CE+CVVGKQHR  FP
Sbjct: 421 LMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQISIPSQVCEECVVGKQHRSQFP 480

Query: 481 TGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEF 540
            GKS RAK+             +   + FKSFKA+VEKE G +IKIL +DRG EY S EF
Sbjct: 481 QGKSRRAKN-----------EKSEAFSAFKSFKARVEKETGRSIKILRTDRGGEYCSNEF 540

Query: 541 ENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHV 596
           E+F ++  I+R+LT AYTPQQN +SERKNRTI+NMVR LL   ++ K+ WP AVNWSIHV
Sbjct: 541 EHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNMVRSLLXRGKIPKSFWPXAVNWSIHV 600

[Close]

BLAST of Pay0021324 vs. ExPASy TrEMBL
Match: A0A438FT48 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3859 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 3.8e-151
Identity = 330/764 (43.19%), Postives = 401/764 (52.49%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGM--PEITAAMTDEQKTEVE 60
           MAS+NFVQPAIPRFDGHYD+  MLMENFLRSKEYW+VVS G+  P   + MTD QKTE+E
Sbjct: 1   MASENFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIE 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKNYLFQAIDRSILETIL KDTS+QIWDSMK KY+GS + KRQQL+ L +EF
Sbjct: 61  GQRLKDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYQGSMRTKRQQLQALRSEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+MK GES++ YFSR M I NKMR+  +K ED+ +IEKI RS+TPKFN+VVC+IEESK
Sbjct: 121 ETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEESK 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKASI------------------------- 240
           ++D+LS+DELQ SLLVHE+K+ Q+D EEQALKAS                          
Sbjct: 181 DLDELSIDELQGSLLVHEQKIIQEDKEEQALKASTNNNALTMNRSADRGRGKGRGGRGNF 240

Query: 241 ----ETPSSSKGGRGR-------------------------------------------- 300
               + P     GRGR                                            
Sbjct: 241 RVDEDQPDFQNRGRGRNQQFDKSKVECFRCHKFGHYRSECYTKLPNDKEKGEKSNYAEKK 300

Query: 301 -----------------------------------------------------------G 360
                                                                      G
Sbjct: 301 EVETLLMAAQVNEQPQAEVWYVDTGCSNHMCGSKSSFCFLNEGFRSTVSFGDCSTVNVMG 360

Query: 361 KGKITLQTKGDIIHTISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNG------------- 420
           KG I ++TK   + TISN  ++ DLK+NLLS GQLQEKGY I I+ G             
Sbjct: 361 KGDINIRTKNGFVETISNVFYVLDLKSNLLSAGQLQEKGYIITIQKGACEIYDPSRGAIA 420

Query: 421 -------------------------------WTQNIAAEKYG--------------DTIK 480
                                          W        +G                I 
Sbjct: 421 VVQMASNRLFPLKIDSVQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQIS 480

Query: 481 SHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSN------------- 508
             S++CE+CV+GKQHR  FP GKS RAK+V EL+HSD+CGPINPTSN             
Sbjct: 481 IPSQVCEECVIGKQHRSQFPQGKSRRAKNVLELVHSDICGPINPTSNGGKKYLIIFIDDY 540

[Close]

BLAST of Pay0021324 vs. NCBI nr
Match: XP_016900876.1 (PREDICTED: uncharacterized protein LOC107991076 [Cucumis melo])

HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGT 60
           MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGT
Sbjct: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEITAAMTDEQKTEVEGT 60

Query: 61  KLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFEN 120
           KLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFEN
Sbjct: 61  KLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEFEN 120

Query: 121 LKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNI 180
           LKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNI
Sbjct: 121 LKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESKNI 180

Query: 181 DDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIH 240
           DDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIH
Sbjct: 181 DDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGKGKITLQTKGDIIH 240

Query: 241 TISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVG 300
           TISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVG
Sbjct: 241 TISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVG 300

Query: 301 KQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRG 360
           KQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRG
Sbjct: 301 KQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRG 360

Query: 361 CEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPE 420
           CEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPE
Sbjct: 361 CEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPE 420

Query: 421 AVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEA 480
           AVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEA
Sbjct: 421 AVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIAYAHVPNKEDHNVVFNEA 480

Query: 481 EFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWM 540
           EFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWM
Sbjct: 481 EFWNHEECKPDQRIQVDFENGDEGTRQQIETNDEATITQEIPAVSGVERAHRVKRKPAWM 540

Query: 541 EDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID 599
           EDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID
Sbjct: 541 EDYVVTGMDHSDDPVVHFALFADCDPVTFEEAVQKPKWQKTMNDEIAAIERNNSWGID 598

[Close]

BLAST of Pay0021324 vs. NCBI nr
Match: RVW92024.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 659.1 bits (1699), Expect = 3.7e-185
Identity = 389/881 (44.15%), Postives = 475/881 (53.92%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGMPEIT--AAMTDEQKTEVE 60
           MAS+ FVQPAIPRFDGHYDH  MLMENFLRSKEYW VVS+G+ E T  A MT  Q+TE++
Sbjct: 1   MASETFVQPAIPRFDGHYDHWNMLMENFLRSKEYWHVVSEGITEPTDNATMTQAQRTELD 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKNYLFQAIDRSILETIL KDTSK IWDSMK KY+GSA+AKRQQL+ L TEF
Sbjct: 61  GQRLKDLKAKNYLFQAIDRSILETILCKDTSKHIWDSMKKKYQGSARAKRQQLQALHTEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+M+SGES+  YFSR M I NKMR+  DK+ED+ I+EKI RS+TP FNFVVC+IEES 
Sbjct: 121 ETLRMRSGESVTDYFSRTMAIVNKMRIHGDKTEDVTIVEKILRSMTPAFNFVVCSIEESH 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSSKGGRGRGK----------- 240
           +ID+LS+DELQSSLLVHERK  QQ+ EEQALKAS E   +++G RGRG+           
Sbjct: 181 DIDELSIDELQSSLLVHERKFNQQEKEEQALKASTENHLATRGDRGRGRSRGRGRGNYDR 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 GNQHQHQRQDNRFQGRGQGGNYSTTYKSRSTDKSNVECYRCHRYGHYKSECRTNMNKQGG 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 ERTNFAEKEEEVSLLMACHANQGTHPNLWYIDTGCSNHMCGDKSAFSDLDETFRNSVTFG 360

Query: 361 --GKITLQTKGDI-IHT-------ISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNG---- 420
              K+++  KG + IH+       ISN  F+PDLKTNLLSVGQLQEKGYEIFIK+G    
Sbjct: 361 DNSKVSVMGKGSVRIHSKEKSDQIISNVFFVPDLKTNLLSVGQLQEKGYEIFIKDGVCRI 420

Query: 421 -------------------------WTQNIAAEKYGD----------------------- 480
                                     TQN  + K  D                       
Sbjct: 421 QDEKLGLIAQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQK 480

Query: 481 -------TIKSHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSN--- 540
                   I++ S+ICE+CVVGKQHR  FP GKSWRA  V EL+HSD+CGPINPTSN   
Sbjct: 481 NMVTGLPPIQTPSQICEECVVGKQHRYQFPKGKSWRANKVLELVHSDICGPINPTSNGGK 540

Query: 541 ---------------------------VFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEF 596
                                       FKSFK  VEKEAG  IKI  SDRG EY SQEF
Sbjct: 541 HYFITFIDDYSRKTWVYFLQEKSEAFSTFKSFKMLVEKEAGKPIKIFCSDRGGEYTSQEF 600

[Close]

BLAST of Pay0021324 vs. NCBI nr
Match: CAN66690.1 (hypothetical protein VITISV_023209 [Vitis vinifera])

HSP 1 Score: 612.1 bits (1577), Expect = 5.2e-171
Identity = 355/752 (47.21%), Postives = 439/752 (58.38%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGM--PEITAAMTDEQKTEVE 60
           MAS+NFVQPAIPRFDGHYD+  MLMENFLRSKEYW+VVS G+  P   + MTD QKTE+E
Sbjct: 1   MASENFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIE 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKN LFQ IDRSILETIL KDTS+QIWDSMK KY+GS + KRQ L+ L +EF
Sbjct: 61  GQRLKDLKAKNXLFQXIDRSILETILCKDTSQQIWDSMKKKYQGSTRTKRQXLQALRSEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+MK GES++ YFSR M I NKMR+  +K ED+ +IEKI  S+TPKFN+VVC+IEESK
Sbjct: 121 ETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILXSMTPKFNYVVCSIEESK 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKA------------------------SIE 240
           ++D+LS+DELQ SLLVHE+K+ Q+D EEQALKA                         + 
Sbjct: 181 DLDELSIDELQGSLLVHEQKIIQEDKEEQALKAXTNNNALTMNRSXDRGRGKGRGVRGVX 240

Query: 241 TPSSSKGGRGR------------------------------------------------- 300
                +GGRG                                                  
Sbjct: 241 DGGRGRGGRGNFRVDEDQPDFQNRGRGXNQQFDKSKAKVWYVDTGCNNHMCGMSFGDCST 300

Query: 301 ----GKGKITLQTKGDIIHTISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNG-------- 360
               GKG I ++TK   + TISN  ++PDLK+NL S GQL EKGY I I+ G        
Sbjct: 301 VNVMGKGDINIRTKNGFVETISNVFYVPDLKSNLXSAGQLXEKGYIITIQKGACEIYDPS 360

Query: 361 ------------------------------------WTQNIAAEKYG------------- 420
                                               W        +G             
Sbjct: 361 RGAIXVVQMASNRLFPLKIDSVQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTG 420

Query: 421 -DTIKSHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAK 480
              I   S++CE+CVVGKQHR  FP GKS RAK+V EL  S+         + FKSFKA+
Sbjct: 421 LPQISIPSQVCEECVVGKQHRSQFPQGKSRRAKNVLELEKSE-------AFSAFKSFKAR 480

Query: 481 VEKEAGMAIKILHSDRGCEYNSQEFENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNM 540
           VEKE G +IKIL +DRG EY S EFE+F ++  I+R+LT AYTPQQN +SERKNRTI+NM
Sbjct: 481 VEKETGRSIKILRTDRGGEYCSNEFEHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNM 540

Query: 541 VRCLLKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHFRIFGYIA 596
           VR LL   ++ K+ WPEAVNWSIHVLNRSPTF VQN TPEEAWSG KP +DHF+IFG IA
Sbjct: 541 VRSLLARGKIPKSFWPEAVNWSIHVLNRSPTFXVQNMTPEEAWSGXKPAVDHFKIFGCIA 600

[Close]

BLAST of Pay0021324 vs. NCBI nr
Match: CAN74536.1 (hypothetical protein VITISV_023111 [Vitis vinifera])

HSP 1 Score: 576.6 bits (1485), Expect = 2.4e-160
Identity = 347/802 (43.27%), Postives = 439/802 (54.74%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGM--PEITAAMTDEQKTEVE 60
           MAS+NFVQPAIPRFDGHYD+  MLMENFLRSKEYW+VVS G+  P   + MTD QKTE+E
Sbjct: 1   MASENFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIE 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKNYLFQAIDRSILETIL KDTS+QIWDSMK KY+GS + KRQQL+ L +EF
Sbjct: 61  GQRLKDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYQGSMRTKRQQLQALRSEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+MK GES++ YFSR M I NKMR+  +K ED+ +IEKI RS+TPKFN+VVC+IEESK
Sbjct: 121 ETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEESK 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKASIETPSSS------------------- 240
           ++D+LS+DELQ SLLVHE+K+ Q+D EEQALKAS    + +                   
Sbjct: 181 DLDELSIDELQGSLLVHEQKIIQEDKEEQALKASTNNNALTMNRSADRGRGKGRGVRGVR 240

Query: 241 KGGRGR------------------------------------------------------ 300
            GGRGR                                                      
Sbjct: 241 DGGRGRNQQFDKSKVEXFRCHKFXHYRSECYTKLPNDKEKGEKSNYAEKKEVETLLMAAQ 300

Query: 301 ---------------------------------------GKGKITLQTKGDIIHTISNDL 360
                                                  GKG I ++TK   + TIS   
Sbjct: 301 VNEQPQAEVWYVDTGCSNHMCGSFRSTVSFGDCSTVNVMGKGDINIRTKNGFVETISYVF 360

Query: 361 FIPDLKTNLLSVGQLQEKGYEIFIKNG--------------------------------- 420
           ++PDLK+NLLS GQLQEKGY I I+ G                                 
Sbjct: 361 YVPDLKSNLLSAGQLQEKGYIITIQKGACEIYDPSRGAIDVVQMASNRLFPLKIDSVQSF 420

Query: 421 -----------WTQNIAAEKYG--------------DTIKSHSEICEDCVVGKQHRDSFP 480
                      W        +G                I   S++CE+CVVGKQHR  FP
Sbjct: 421 LMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQISIPSQVCEECVVGKQHRSQFP 480

Query: 481 TGKSWRAKHVFELIHSDLCGPINPTSNVFKSFKAKVEKEAGMAIKILHSDRGCEYNSQEF 540
            GKS RAK+             +   + FKSFKA+VEKE G +IKIL +DRG EY S EF
Sbjct: 481 QGKSRRAKN-----------EKSEAFSAFKSFKARVEKETGRSIKILRTDRGGEYCSNEF 540

Query: 541 ENFYEEHDIKRQLTTAYTPQQNDISERKNRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHV 596
           E+F ++  I+R+LT AYTPQQN +SERKNRTI+NMVR LL   ++ K+ WP AVNWSIHV
Sbjct: 541 EHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNMVRSLLXRGKIPKSFWPXAVNWSIHV 600

[Close]

BLAST of Pay0021324 vs. NCBI nr
Match: RVW63136.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 545.0 bits (1403), Expect = 7.8e-151
Identity = 330/764 (43.19%), Postives = 401/764 (52.49%), Query Frame = 0


Query: 1   MASKNFVQPAIPRFDGHYDHLKMLMENFLRSKEYWEVVSDGM--PEITAAMTDEQKTEVE 60
           MAS+NFVQPAIPRFDGHYD+  MLMENFLRSKEYW+VVS G+  P   + MTD QKTE+E
Sbjct: 1   MASENFVQPAIPRFDGHYDYWSMLMENFLRSKEYWQVVSGGIAEPATNSPMTDAQKTEIE 60

Query: 61  GTKLKDLKAKNYLFQAIDRSILETILYKDTSKQIWDSMKNKYEGSAKAKRQQLKTLCTEF 120
           G +LKDLKAKNYLFQAIDRSILETIL KDTS+QIWDSMK KY+GS + KRQQL+ L +EF
Sbjct: 61  GQRLKDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYQGSMRTKRQQLQALRSEF 120

Query: 121 ENLKMKSGESIAIYFSRVMEITNKMRMFRDKSEDIIIIEKIFRSLTPKFNFVVCAIEESK 180
           E L+MK GES++ YFSR M I NKMR+  +K ED+ +IEKI RS+TPKFN+VVC+IEESK
Sbjct: 121 ETLRMKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEESK 180

Query: 181 NIDDLSLDELQSSLLVHERKLKQQDNEEQALKASI------------------------- 240
           ++D+LS+DELQ SLLVHE+K+ Q+D EEQALKAS                          
Sbjct: 181 DLDELSIDELQGSLLVHEQKIIQEDKEEQALKASTNNNALTMNRSADRGRGKGRGGRGNF 240

Query: 241 ----ETPSSSKGGRGR-------------------------------------------- 300
               + P     GRGR                                            
Sbjct: 241 RVDEDQPDFQNRGRGRNQQFDKSKVECFRCHKFGHYRSECYTKLPNDKEKGEKSNYAEKK 300

Query: 301 -----------------------------------------------------------G 360
                                                                      G
Sbjct: 301 EVETLLMAAQVNEQPQAEVWYVDTGCSNHMCGSKSSFCFLNEGFRSTVSFGDCSTVNVMG 360

Query: 361 KGKITLQTKGDIIHTISNDLFIPDLKTNLLSVGQLQEKGYEIFIKNG------------- 420
           KG I ++TK   + TISN  ++ DLK+NLLS GQLQEKGY I I+ G             
Sbjct: 361 KGDINIRTKNGFVETISNVFYVLDLKSNLLSAGQLQEKGYIITIQKGACEIYDPSRGAIA 420

Query: 421 -------------------------------WTQNIAAEKYG--------------DTIK 480
                                          W        +G                I 
Sbjct: 421 VVQMASNRLFPLKIDSVQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQIS 480

Query: 481 SHSEICEDCVVGKQHRDSFPTGKSWRAKHVFELIHSDLCGPINPTSN------------- 508
             S++CE+CV+GKQHR  FP GKS RAK+V EL+HSD+CGPINPTSN             
Sbjct: 481 IPSQVCEECVIGKQHRSQFPQGKSRRAKNVLELVHSDICGPINPTSNGGKKYLIIFIDDY 540

[Close]

BLAST of Pay0021324 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 3.5e-08
Identity = 25/70 (35.71%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 397 NRTIMNMVRCLLKSSEVQKTSWPEAVNWSIHVLNRSPTFAVQNQTPEEAWSGQKPNIDHF 456
           NRTI+  VR +L    + KT   +A N ++H++N+ P+ A+    P+E W    P   + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 457 RIFGYIAYAH 467
           R FG +AY H
Sbjct: 62  RRFGCVAYIH 71

[Close]

BLAST of Pay0021324 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.0 bits (110), Expect = 6.2e-05
Identity = 22/71 (30.99%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 258 VGQLQEKGYEIFIKNGWTQNIAAEKYGDTIKSHSEICEDCVVGKQHRDSFPTGKSWRAKH 317
           +  + ++G E+ +K G+  +           S  + CEDC+ GK HR +F TG+    K+
Sbjct: 76  LAHMSQRGMELLVKKGFLDSSKV--------SSLKFCEDCIYGKTHRVNFSTGQH-TTKN 135

Query: 318 VFELIHSDLCG 329
             + +HSDL G
Sbjct: 136 PLDYVHSDLWG 137

The following BLAST results are available for this feature:

BLAST of Pay0021324 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.1e-36	34.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	2.0e-16	29.50	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	7.2e-14	25.59	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12491	1.2e-08	25.00	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P25384	1.2e-08	25.00	Transposon Ty2-C Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Pay0021324 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DY17	0.0e+00	100.00	uncharacterized protein LOC107991076 OS=Cucumis melo OX=3656 GN=LOC107991076 PE=...	[more]
A0A438I5N6	1.8e-185	44.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5AFP3	2.5e-171	47.21	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A5BGM4	1.2e-160	43.27	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A438FT48	3.8e-151	43.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of Pay0021324 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900876.1	0.0e+00	100.00	PREDICTED: uncharacterized protein LOC107991076 [Cucumis melo]	[more]
RVW92024.1	3.7e-185	44.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN66690.1	5.2e-171	47.21	hypothetical protein VITISV_023209 [Vitis vinifera]	[more]
CAN74536.1	2.4e-160	43.27	hypothetical protein VITISV_023111 [Vitis vinifera]	[more]
RVW63136.1	7.8e-151	43.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Pay0021324 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00710.1	3.5e-08	35.71	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00300.1	6.2e-05	30.99	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 185..205
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 62..201 e-value: 6.0E-23 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..229
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 3..230
None	No IPR available	PANTHER	PTHR34222:SF47	SUBFAMILY NOT NAMED	coord: 3..230
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 311..458 e-value: 4.7E-30 score: 106.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 353..450 score: 15.91823
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 319..459

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021324.1	Pay0021324.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding