Pay0019404 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019404
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag/pol protein
Location	chr01: 12161507 .. 12163263 (-)
RNA-Seq Expression	Pay0019404
Synteny	Pay0019404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGAGCTGTAG

mRNA sequence

ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGAGCTGTAG

Coding sequence (CDS)

ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGAGCTGTAG

Protein sequence

MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGEL

Homology

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BLAST of Pay0019404 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 7.3e-94
Identity = 210/607 (34.60%), Postives = 309/607 (50.91%), Query Frame = 0


Query: 2    VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP- 61
            VRSM+  A+LP SFWG AV+TA +++N  PS  ++ E P  +W  ++ S SH +++GC  
Sbjct: 596  VRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 655

Query: 62   -AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE--------- 121
             AHV      KL+ +S  C F+GY  E  G   +DP + +V  S +  F E         
Sbjct: 656  FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADM 715

Query: 122  ------------------------------EDHMRNHKPRSKLVLSEATDESTRVV---- 181
                                          E   +  +P   +   E  DE    V    
Sbjct: 716  SEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPT 775

Query: 182  ---DEVGPSSRVDETTTSGQSHPSQSL------RMPRRSGRVVSQPNR------------ 241
               ++  P  R +      + +PS         R P     V+S P +            
Sbjct: 776  QGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEME 835

Query: 242  --------------------------------------------YLGYTQREGVDYEETF 301
                                                          G+ Q++G+D++E F
Sbjct: 836  SLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIF 895

Query: 302  SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICK 361
            SPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE                  +CK
Sbjct: 896  SPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCK 955

Query: 362  LNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLI 421
            LN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++
Sbjct: 956  LNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIV 1015

Query: 422  GNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSM 479
            G D G +  +K  L+  F MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M
Sbjct: 1016 GKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNM 1075

[Close]

BLAST of Pay0019404 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 206.8 bits (525), Expect = 5.3e-52
Identity = 118/321 (36.76%), Postives = 185/321 (57.63%), Query Frame = 0


Query: 177  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------- 236
            G+TQ+  +DYEETF+PVA + S R +LS+   Y+ ++ QMDVKTAFLNG L+E       
Sbjct: 962  GFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLP 1021

Query: 237  ---------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKV 296
                     +CKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K N  + 
Sbjct: 1022 QGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINEN 1081

Query: 297  AFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQ 356
             +++LYVDD+++   D+  + + K +L  +F+M DL E ++ +GI+I  + +   + LSQ
Sbjct: 1082 IYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQ 1141

Query: 357  ATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAM 416
            + Y+ K+L +++M+N      P    ++     S       ++    P  S +G LMY M
Sbjct: 1142 SAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-------DEDCNTPCRSLIGCLMYIM 1201

Query: 417  LCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYG---AKDLILTGYT 476
            LCTRPD+  AV I+SRY S    + W  +K VL+YL+ T D  L++    A +  + GY 
Sbjct: 1202 LCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYV 1261

[Close]

BLAST of Pay0019404 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.2e-43
Identity = 113/319 (35.42%), Postives = 162/319 (50.78%), Query Frame = 0


Query: 177  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------- 236
            GY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L +       
Sbjct: 1008 GYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQP 1067

Query: 237  -----------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKV 296
                       +C+L ++IYGLKQA R+W +   T + + GF  ++ +  ++       +
Sbjct: 1068 PGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSI 1127

Query: 297  AFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQ 356
             ++++YVDDIL+ GND   L      L+ +F +K+  +  Y LGI+    R  + L LSQ
Sbjct: 1128 IYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQ 1187

Query: 357  ATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAM 416
              Y   LL R +M  +K    P      L+     K P   E      Y   VGSL Y +
Sbjct: 1188 RRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQY-L 1247

Query: 417  LCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDS 476
              TRPD+ YAV  +S+Y   P  DHW A+K VL+YL  T D+ + +     L L  Y+D+
Sbjct: 1248 AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDA 1307

[Close]

BLAST of Pay0019404 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.5e-41
Identity = 113/319 (35.42%), Postives = 161/319 (50.47%), Query Frame = 0


Query: 177  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------- 236
            GY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L +       
Sbjct: 1025 GYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQP 1084

Query: 237  -----------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKV 296
                       +CKL +++YGLKQA R+W +     + + GF  +V +  ++       +
Sbjct: 1085 PGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSI 1144

Query: 297  AFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQ 356
             ++++YVDDIL+ GND   L +    L+ +F +KD  E  Y LGI+    R    L LSQ
Sbjct: 1145 VYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQ 1204

Query: 357  ATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAM 416
              YI  LL R +M  +K    P      LS     K     E      Y   VGSL Y +
Sbjct: 1205 RRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQY-L 1264

Query: 417  LCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDS 476
              TRPDI YAV  +S++   P  +H  A+K +L+YL  T ++ + +     L L  Y+D+
Sbjct: 1265 AFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDA 1324

[Close]

BLAST of Pay0019404 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.8e-24
Identity = 87/282 (30.85%), Postives = 122/282 (43.26%), Query Frame = 0


Query: 216 MDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKS 275
           MDV TAFLN  ++E                  + +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 276 YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 335
            GF ++  E  +Y +       ++ +YVDD+L+          VK  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 336 QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 395
              LG+  I    N  + LS   YI K      +   K    P  +   L +  SP    
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 396 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 455
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + VL+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 456 RDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG 479
           R   L Y     L LT Y D+      D   ST G V  L G
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAG 275

[Close]

BLAST of Pay0019404 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.0e-263
Identity = 477/583 (81.82%), Postives = 478/583 (81.99%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
            KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                   GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 820

Query: 301  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
            WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
            EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

[Close]

BLAST of Pay0019404 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.0e-263
Identity = 477/583 (81.82%), Postives = 478/583 (81.99%), Query Frame = 0


Query: 1   MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
           MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 515 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 574

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 575 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 634

Query: 241 -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Sbjct: 635 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 694

Query: 301 WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 695 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 754

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 755 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 814

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 815 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 874

[Close]

BLAST of Pay0019404 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 902.1 bits (2330), Expect = 9.8e-259
Identity = 468/583 (80.27%), Postives = 474/583 (81.30%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
            KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                   GYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEI 820

Query: 301  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
            WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
            E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

[Close]

BLAST of Pay0019404 vs. ExPASy TrEMBL
Match: A0A5D3CZY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00460 PE=4 SV=1)

HSP 1 Score: 863.6 bits (2230), Expect = 3.9e-247
Identity = 449/583 (77.02%), Postives = 465/583 (79.76%), Query Frame = 0


Query: 1   MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
           MVRSMMSYAQLPSSFWGYAVETAVHILNNV SKSVSETPFELWRGRKPSLSHF+I GCPA
Sbjct: 131 MVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWRGRKPSLSHFKILGCPA 190

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQ+NRV VSTNATFLEEDHMR+HKP++
Sbjct: 191 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTNATFLEEDHMRDHKPQN 250

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
           KLVL+EA DESTRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VSQPNRYL    
Sbjct: 251 KLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTE 310

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 311 TQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLMWELVDLPEGVKPIGCK 370

Query: 241 -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Sbjct: 371 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 430

Query: 301 WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
           W+MDV TAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 431 WKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 490

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
           KSYGF+QNVDEPCVYKKINKGKV FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 491 KSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 550

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
           EAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKT
Sbjct: 551 EAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKT 610

[Close]

BLAST of Pay0019404 vs. ExPASy TrEMBL
Match: A0A5A7V8W0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4427G00180 PE=4 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 1.0e-239
Identity = 435/525 (82.86%), Postives = 445/525 (84.76%), Query Frame = 0


Query: 1   MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
           MV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 384 MVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPA 443

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           +VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRV VSTNATFLEEDHM +HKPR+
Sbjct: 444 YVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRN 503

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
           KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 504 KLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTE 563

Query: 181 -------------------------------------------GYTQREGVDYEETFSPV 240
                                                      GYTQREGVDYE+TFSPV
Sbjct: 564 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLKMESILVAKGYTQREGVDYEDTFSPV 623

Query: 241 AMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDT 300
           AMLKSIRILL IA FYDYEIWQMDVK AFLNGNLEE      SI+       S    FDT
Sbjct: 624 AMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGNLEE------SIF------MSQPEGFDT 683

Query: 301 AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKD 360
           AIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKAWLAAQFQMKD
Sbjct: 684 AIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKD 743

Query: 361 LGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSP 420
           LGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ P
Sbjct: 744 LGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCP 803

Query: 421 KTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKY 479
           KTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDHWT +KI+LKY
Sbjct: 804 KTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKY 863

[Close]

BLAST of Pay0019404 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.7 bits (2373), Expect = 2.1e-263
Identity = 477/583 (81.82%), Postives = 478/583 (81.99%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
            KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                   GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 820

Query: 301  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
            WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
            EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

[Close]

BLAST of Pay0019404 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.7 bits (2373), Expect = 2.1e-263
Identity = 477/583 (81.82%), Postives = 478/583 (81.99%), Query Frame = 0


Query: 1   MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
           MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 515 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 574

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 575 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 634

Query: 241 -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Sbjct: 635 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 694

Query: 301 WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 695 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 754

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 755 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 814

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 815 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 874

[Close]

BLAST of Pay0019404 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 902.1 bits (2330), Expect = 2.0e-258
Identity = 468/583 (80.27%), Postives = 474/583 (81.30%), Query Frame = 0


Query: 1    MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
            MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 521  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61   HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
            HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
            KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 641  KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 701  TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                   GYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Sbjct: 761  WIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEI 820

Query: 301  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
            WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
            KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 881  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
            E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT
Sbjct: 941  EGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 1000

[Close]

BLAST of Pay0019404 vs. NCBI nr
Match: KAA0033121.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 863.6 bits (2230), Expect = 8.0e-247
Identity = 449/583 (77.02%), Postives = 465/583 (79.76%), Query Frame = 0


Query: 1   MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
           MVRSMMSYAQLPSSFWGYAVETAVHILNNV SKSVSETPFELWRGRKPSLSHF+I GCPA
Sbjct: 131 MVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWRGRKPSLSHFKILGCPA 190

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQ+NRV VSTNATFLEEDHMR+HKP++
Sbjct: 191 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTNATFLEEDHMRDHKPQN 250

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
           KLVL+EA DESTRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VSQPNRYL    
Sbjct: 251 KLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTE 310

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 311 TQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLMWELVDLPEGVKPIGCK 370

Query: 241 -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 300
                                  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Sbjct: 371 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 430

Query: 301 WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAI 360
           W+MDV TAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 431 WKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 490

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 420
           KSYGF+QNVDEPCVYKKINKGKV FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
Sbjct: 491 KSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 550

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 479
           EAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKT
Sbjct: 551 EAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKT 610

[Close]

BLAST of Pay0019404 vs. NCBI nr
Match: KAA0062886.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 839.0 bits (2166), Expect = 2.1e-239
Identity = 435/525 (82.86%), Postives = 445/525 (84.76%), Query Frame = 0


Query: 1   MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 60
           MV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSLSHFRIWGCPA
Sbjct: 384 MVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPA 443

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           +VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRV VSTNATFLEEDHM +HKPR+
Sbjct: 444 YVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRN 503

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL---- 180
           KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL    
Sbjct: 504 KLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTE 563

Query: 181 -------------------------------------------GYTQREGVDYEETFSPV 240
                                                      GYTQREGVDYE+TFSPV
Sbjct: 564 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLKMESILVAKGYTQREGVDYEDTFSPV 623

Query: 241 AMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDT 300
           AMLKSIRILL IA FYDYEIWQMDVK AFLNGNLEE      SI+       S    FDT
Sbjct: 624 AMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGNLEE------SIF------MSQPEGFDT 683

Query: 301 AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKD 360
           AIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKAWLAAQFQMKD
Sbjct: 684 AIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKD 743

Query: 361 LGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSP 420
           LGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ P
Sbjct: 744 LGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCP 803

Query: 421 KTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKY 479
           KTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDHWT +KI+LKY
Sbjct: 804 KTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKY 863

[Close]

BLAST of Pay0019404 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-43
Identity = 106/327 (32.42%), Postives = 174/327 (53.21%), Query Frame = 0


Query: 177 GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------- 236
           GYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFLNG+L+E       
Sbjct: 154 GYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213

Query: 237 ---------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 296
                          +C L +SIYGLKQASR W ++F   +  +GF Q+  +   + KI 
Sbjct: 214 PGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273

Query: 297 KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 356
                 +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y LG++I R      +
Sbjct: 274 ATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--I 333

Query: 357 ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 416
            + Q  Y   LL    +   K   +P    V  S         +  D +   Y   +G L
Sbjct: 334 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVDAK--AYRRLIGRL 393

Query: 417 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK-DLILTG 476
           MY  + TR DI +AV  +S++   P L H  AV  +L Y++ T    L Y ++ ++ L  
Sbjct: 394 MYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 453

Query: 477 YTDSDFQTDKDSRKSTSGSVFTLNGEL 481
           ++D+ FQ+ KD+R+ST+G    L   L
Sbjct: 454 FSDASFQSCKDTRRSTNGYCMFLGTSL 471

[Close]

BLAST of Pay0019404 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 7.4e-17
Identity = 68/193 (35.23%), Postives = 98/193 (50.78%), Query Frame = 0


Query: 280 FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 339
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 340 TYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAML 399
            Y +++L    M + K    P    + L+   S     +  D R     S VG+L Y  L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFR-----SIVGALQYLTL 121

Query: 400 CTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSD 459
            TRPDI YAV IV +    P L  +  +K VL+Y++ T  + + ++    L +  + DSD
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181

Query: 460 FQTDKDSRKSTSG 472
           +     +R+ST+G
Sbjct: 182 WAGCTSTRRSTTG 184

[Close]

BLAST of Pay0019404 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-07
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 2  VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPA 61
          VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ R +GC A
Sbjct: 9  VRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRFGCVA 68

Query: 62 HVLVTNPKKLEPRSR 76
          ++   +  KL+PR++
Sbjct: 69 YI-HCDEGKLKPRAK 82

[Close]

BLAST of Pay0019404 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.2e-04
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 401 TRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGA-KDLILTGYTDSDF 460
           TRPD+ +AV  +S++ S        AV  VL Y++ T    L Y A  DL L  + DSD+
Sbjct: 6   TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 461 QTDKDSRKSTSG 472
            +  D+R+S +G
Sbjct: 66  ASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Pay0019404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.3e-94	34.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	5.3e-52	36.76	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.2e-43	35.42	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.5e-41	35.42	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	2.8e-24	30.85	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Pay0019404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	1.0e-263	81.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	1.0e-263	81.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	9.8e-259	80.27	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3CZY3	3.9e-247	77.02	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G004...	[more]
A0A5A7V8W0	1.0e-239	82.86	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4427G001...	[more]

BLAST of Pay0019404 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	2.1e-263	81.82	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	2.1e-263	81.82	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	2.0e-258	80.27	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033121.1	8.0e-247	77.02	gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis ...	[more]
KAA0062886.1	2.1e-239	82.86	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0019404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-43	32.42	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.4e-17	35.23	DNA/RNA polymerases superfamily protein	[more]
ATMG00710.1	1.4e-07	38.67	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00240.1	3.2e-04	37.50	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..55 e-value: 8.4E-7 score: 30.4
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 177..360 e-value: 5.6E-41 score: 140.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..165
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 2..168 coord: 177..443
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 208..451
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019404.1	Pay0019404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding