Pay0018923 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018923
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	exosome complex component RRP4 homolog
Location	chr02: 24261018 .. 24264324 (+)
RNA-Seq Expression	Pay0018923
Synteny	Pay0018923

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCACCCTAAAATTCTGTTAATTCGACGATACCGTTGGGCCACCACGAATGTCAGCCGCCAACCGCCACTTTCATTGGCAGATATAACGCCATTGACTCCGGGGAGTTACAACACGACAAATTCATCTTTCTTTTGTTTCTTTTTCTTTCAGACATTCTATTGTAGCTCGGTTTCATTCTTTGGTTGAGTAGTTGGAGCCTGGAGGTATGCAGATTCTTGCATTGTTGTTTTAACTTAAATTTTCATTATGAGAATATTTGTATTATTAAAATGCGATTTTGACGCTGATTGAATTTTTTCTCTGGGACTAATTGTTTGATTAAATTTTGTTTTTAAGTTTATTGTGCGTCCAAAATGTGATTTTTTAGTTTTATTATGAGCCTATTGCGTGATTCGATGTTTGTTAATGAACTTTTGAAGTTATAGAATATAATTCTTTTTCTTTGGCTTATTGAAGATTTGAACTTCCTAATCAAATCTTTTAAGTTAAAAGTTTTCTCGAGTTTAGTATGTGTAATGTAACTTGGAGACTTAACTAATTGTGATTTCGACTTTGGAAGCTATTATGTGATTAAAGTACTTTTTAGATGGTTTTTGTGTTAAAGTATGATATTTATGCTATTGAGCCGGTTGAACATTTAAATGTGATTAGAAGATTGATTTTTAGAATTTGATATTGTTCTCTTAGTTGTATTTTATTATTTTCTTAGTCGGAGTTTATGATTACTCAAATGTTTGTTGATGATTCTAGTGATCATCGAATGTTGGAAATTGGATATATATACATCAGCAACACATTATTGTTTAAGCTAATGGTTTCAAATAAATTCATGATAAGTTGCCGTTTGACAAAATTCAAAGTAGATTATGCATAGAATATAAAGATGGAATAAGATCAGTGAAGGAGCATAATCATTCCTTATAAACATGTATGCATTTGTAACCTAAACTCAACAAACGATTATGATACATTGTCCACCACTATTTTATTTTATTTTATCAGATGTCATGTCATTGCAAATATCTTGTTATAGTACTTCTATTTTGGTGTTGTGTATCCTTCAGCACCCGTATATCCTAACCTAGAAATTACCTAAATGCAGATATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCCCAAAAAACGCTCGAGTCTCTCTCATCAAAGGCTAATTATGATGCTTCAGTTGCAGTTGGTGATACTGTTCCTTTCAGTTACGAGGATGGCGTTCTCAAGTATATAATTTCTGACTATCCTTATATAATAAAAGTTTGGATTGTTGTGTACTTGCCGGGGGATTATATGCATTGAAGTATAACTGAAATTTGTATGCAGGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAGTCAATAAGCTTATCTATGTACGTTCCCTACGTGCCAGGTTGTCCGTGAAATCTTGTAATTTGGTTTATCTGGATGATAGCTTAATGTTTTCCTTTCTTTTTTGTATTGTTATTATATCTTTTCTGATGTAATTGTCTATACTGGATATTAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTAAAGCTAAACGCTTTTTATTAGTTTTTTTAGTTTTATGAAAATATAATATATAGACAATGGTGAGTAAAATAGGCAGGATAATTTTATTTGGGAGTCACGGTTAAGATGTGGTATATAGGAAAAATGTGTTAAGAGTGCTCCCCACCATCCCTTTTTTTTTTCTTATCATTTGATGGGATCTTATTCAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTACAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGGTATTAGAGAATTCCCTTTCGTTATGGAAATAATGGTGCATACCATTGCACAGAGCGTGAATTATTGATGCCTTCTGTTTAACTTTACAGAAAATTTAGCTGAAAAATTGATTCAACTGATCCTCCTCCTCTTCTTCCTTTTTTCTTTTCTAAAGAGTGGTTGCATTTGTTGTAACTATGGATTAATTGTATTATTTTTATTTCTAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGAAGAAAATGATGTTATTTGTGTAAGTTTTATAGTTTTCAATTTTTGAAGAATTAGACTTTTGAACTTCTGAAGCGTTGCCTGAAGATATTTGCCTATTGATCTCTCAATCTCTGTACAATGATTAAAGCCTAAATTTACCCTGCACTAGTCTATAATAAATAAACACCACTCTCAACTCTCATCAGTAATTGTTCCTGCATAATTTTCCATTTTAAAAAAATAACATCACCACGTCCTTTCTCAGGCAGAAGTACGTGGTTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGGTAGAAAATCTCGTTTTTAAGCTCCTACATGTTGATGTAAAGACAGCATCAGTTTTTAAATCAATTTTTTGTGTGACGCACAATATTAGAGGGTACCTATACTGATAGGATACCTTTGATGCACTGGTTATTGGTTATCATGTGTTCCTAACAACTTTTCTGGCATCATCTCATCTTGTTTCTTTATGACTTGTGAATAAAATTTGTGTATTTGTATCCAGCTTGAACGTGGTCAACTTCTAACAGTTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGCATGTTGATTCTACACAGGACACGATGATAGAAGATCAAGTTAATAAAATTGAACAAAAGGGTTCAAAATTTGAAGGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCCATTAGAGACACGACAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGGTTTTATAATAACAGTAGAAGTCATAATGGAGACAGTTAGTCTAAGTATTTCTCTGAACATCAATGTACATGAAATGCTCGGTTTGGAGTTCTTTGTCCTTGTGGCAGAAAAAGAGGTTGAACGACGAAGTTGCAGAAAGAAGAGAGGGTGATTTGGTTTTCTGTCAATAATGTGTGTAATTTGAACCACTCCTAATGAAAATTTTGCTACGAACCGTTTGATTTGCAGAGGAATTTAGTACTAGAATATTTTGTAGAATTTTAGATTACGACCACTTGGTCTGTGTACACATCAGTGAAGAATGCAAC

mRNA sequence

CCGCCACCCTAAAATTCTGTTAATTCGACGATACCGTTGGGCCACCACGAATGTCAGCCGCCAACCGCCACTTTCATTGGCAGATATAACGCCATTGACTCCGGGGAGTTACAACACGACAAATTCATCTTTCTTTTGTTTCTTTTTCTTTCAGACATTCTATTGTAGCTCGGTTTCATTCTTTGGTTGAGTAGTTGGAGCCTGGAGATATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCCCAAAAAACGCTCGAGTCTCTCTCATCAAAGGCTAATTATGATGCTTCAGTTGCAGTTGGTGATACTGTTCCTTTCAGTTACGAGGATGGCGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAGTCAATAAGCTTATCTATGTACGTTCCCTACGTGCCAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTACAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTACGTGGTTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAGTTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGCATGTTGATTCTACACAGGACACGATGATAGAAGATCAAGTTAATAAAATTGAACAAAAGGGTTCAAAATTTGAAGGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCCATTAGAGACACGACAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGGTTTTATAATAACAGTAGAAGTCATAATGGAGACAGTTAGTCTAAGTATTTCTCTGAACATCAATGTACATGAAATGCTCGGTTTGGAGTTCTTTGTCCTTGTGGCAGAAAAAGAGGTTGAACGACGAAGTTGCAGAAAGAAGAGAGGGTGATTTGGTTTTCTGTCAATAATGTGTGTAATTTGAACCACTCCTAATGAAAATTTTGCTACGAACCGTTTGATTTGCAGAGGAATTTAGTACTAGAATATTTTGTAGAATTTTAGATTACGACCACTTGGTCTGTGTACACATCAGTGAAGAATGCAAC

Coding sequence (CDS)

ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCCCAAAAAACGCTCGAGTCTCTCTCATCAAAGGCTAATTATGATGCTTCAGTTGCAGTTGGTGATACTGTTCCTTTCAGTTACGAGGATGGCGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAGTCAATAAGCTTATCTATGTACGTTCCCTACGTGCCAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTACAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTACGTGGTTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAGTTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGCATGTTGATTCTACACAGGACACGATGATAGAAGATCAAGTTAATAAAATTGAACAAAAGGGTTCAAAATTTGAAGGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCCATTAGAGACACGACAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGGTTTTATAATAACAGTAGAAGTCATAATGGAGACAGTTAGTCTAAGTATTTCTCTGAACATCAATGTACATGAAATGCTCGGTTTGGAGTTCTTTGTCCTTGTGGCAGAAAAAGAGGTTGAACGACGAAGTTGCAGAAAGAAGAGAGGGTGA

Protein sequence

MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINVHEMLGLEFFVLVAEKEVERRSCRKKRG

Homology

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BLAST of Pay0018923 vs. ExPASy Swiss-Prot
Match: Q9ZVT7 (Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.8e-113
Identity = 208/327 (63.61%), Postives = 261/327 (79.82%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MR LQ+ L+ TQ+ R + A + L+SLSS AN DASV V D++P +++D  LKGHGT +++
Sbjct: 3   MRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GE++ T+CGVVERV+KL+YVR+LRARYKPE+GDIVVGRV EVA KRWR++++++QD VLM
Sbjct: 63  GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 180
           LSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182

Query: 181 QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG 240
           QLL V PYLVKR K HFH++E  GIDLI+GCNGFIW+G+HV+      I+DQ ++ E   
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDE-EMIS 242

Query: 241 SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN 300
           S   G       E+ H PLETRQ ICR  NAIRVLS LGF +T+EVIMETV+LS S NI+
Sbjct: 243 SSSTGK------EQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNID 302

Query: 301 VHEMLGLEFFVLVAEKEVERRSCRKKR 327
           +H+MLG EF V+VAE E ERR  ++K+
Sbjct: 303 IHDMLGSEFHVVVAENEAERRRTKRKK 322

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BLAST of Pay0018923 vs. ExPASy Swiss-Prot
Match: Q09704 (Exosome complex component rrp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp4 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.3e-46
Identity = 99/226 (43.81%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 51  LKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLD 110
           ++GHGT   +G +  ++ G V+RVNKLI V+ LR++Y PEIGD+++G++ EV PKRW++D
Sbjct: 71  MRGHGTYFEDGGIYASVAGSVQRVNKLISVKPLRSKYVPEIGDLIIGKIAEVQPKRWKVD 130

Query: 111 IHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQAR 170
           I   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D++ AEV+ +  DG + +  R
Sbjct: 131 IGAKQNAVLMLSSINLPGGIQRRKLETDELQMRSFFQEGDLLVAEVQQYFSDGSVSIHTR 190

Query: 171 SQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIE 230
           S KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ KH ++   ++  
Sbjct: 191 SLKYGKLRNGVFLKVPPALVVRSKSHAYALAG-GVDIILSVNGYVWVSKHNENQHSSV-- 250

Query: 231 DQVNKIEQKGSKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLS 276
             + ++E++ S  E  + N+  E       TR NI R +  I+ L+
Sbjct: 251 -SITRLEEEAS--ESIYSNENDE---IDGYTRLNISRVSICIKGLA 287

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BLAST of Pay0018923 vs. ExPASy Swiss-Prot
Match: Q8VBV3 (Exosome complex component RRP4 OS=Mus musculus OX=10090 GN=Exosc2 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.6e-45
Identity = 101/205 (49.27%), Postives = 135/205 (65.85%), Query Frame = 0


Query: 13  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVE 72
           + RL  A+K L     + +    V  GDT+  + + G ++GHGT     +++ ++ G VE
Sbjct: 4   EMRLPKARKPLSESLGRDSKKHLVVPGDTI--TTDTGFMRGHGTYMGEEKLIASVAGSVE 63

Query: 73  RVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQR 132
           RVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +   D+VL+LSSMNLP G  R
Sbjct: 64  RVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELR 123

Query: 133 RRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKR 192
           RR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR
Sbjct: 124 RRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKR 183

Query: 193 RKQHFHHLEQYGIDLILGCNGFIWI 217
           +K HFH L   G  +ILG NGFIWI
Sbjct: 184 QKTHFHDL-PCGASVILGNNGFIWI 205

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BLAST of Pay0018923 vs. ExPASy Swiss-Prot
Match: Q2KID0 (Exosome complex component RRP4 OS=Bos taurus OX=9913 GN=EXOSC2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-44
Identity = 100/205 (48.78%), Postives = 135/205 (65.85%), Query Frame = 0


Query: 13  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVE 72
           + RL  A+K L     + +    V  GDT+  + + G ++GHGT     +++ ++ G VE
Sbjct: 4   EMRLPVARKPLSESLGRESKKHLVVPGDTI--TTDTGFMRGHGTYMGEEKLIASVAGSVE 63

Query: 73  RVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQR 132
           RVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +   D+VL+LSSMNLP G  R
Sbjct: 64  RVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELR 123

Query: 133 RRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKR 192
           RR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR
Sbjct: 124 RRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKR 183

Query: 193 RKQHFHHLEQYGIDLILGCNGFIWI 217
           +K HFH L   G  +ILG NGFIW+
Sbjct: 184 QKTHFHDL-PCGASVILGNNGFIWV 205

[Close]

BLAST of Pay0018923 vs. ExPASy Swiss-Prot
Match: Q13868 (Exosome complex component RRP4 OS=Homo sapiens OX=9606 GN=EXOSC2 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-44
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 0


Query: 13  QTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVE 72
           + RL  A+K L     +      V  GDT+  + + G ++GHGT     +++ ++ G VE
Sbjct: 4   EMRLPVARKPLSERLGRDTKKHLVVPGDTI--TTDTGFMRGHGTYMGEEKLIASVAGSVE 63

Query: 73  RVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQR 132
           RVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +   D+VL+LSSMNLP G  R
Sbjct: 64  RVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELR 123

Query: 133 RRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKR 192
           RR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR
Sbjct: 124 RRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKR 183

Query: 193 RKQHFHHLEQYGIDLILGCNGFIWI 217
           +K HFH L   G  +ILG NGFIWI
Sbjct: 184 QKTHFHDL-PCGASVILGNNGFIWI 205

[Close]

BLAST of Pay0018923 vs. ExPASy TrEMBL
Match: A0A1S3CLC6 (exosome complex component RRP4 homolog OS=Cucumis melo OX=3656 GN=LOC103502293 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 8.6e-182
Identity = 326/327 (99.69%), Postives = 326/327 (99.69%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM
Sbjct: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
Sbjct: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EFFVLVAEKEVERRSCRKKRG
Sbjct: 301 HEMLGSEFFVLVAEKEVERRSCRKKRG 327

[Close]

BLAST of Pay0018923 vs. ExPASy TrEMBL
Match: A0A5A7URG7 (Exosome complex component RRP4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00290 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.3e-181
Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRAR-YKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVL 120
           GEVVTTICGVVERVNKLIYVRSLRAR YKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVL
Sbjct: 61  GEVVTTICGVVERVNKLIYVRSLRARLYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVL 120

Query: 121 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERG 180
           MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERG
Sbjct: 121 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERG 180

Query: 181 QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG 240
           QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG
Sbjct: 181 QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG 240

Query: 241 SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN 300
           SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
Sbjct: 241 SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN 300

Query: 301 VHEMLGLEFFVLVAEKEVERRSCRKKRG 328
           VHEMLGLEFFVLVAEKEVERRSCRKKRG
Sbjct: 301 VHEMLGLEFFVLVAEKEVERRSCRKKRG 328

[Close]

BLAST of Pay0018923 vs. ExPASy TrEMBL
Match: A0A6J1K7S0 (exosome complex component RRP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490943 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.9e-157
Identity = 281/327 (85.93%), Postives = 305/327 (93.27%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDL 
Sbjct: 1   MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLY 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVTEVAPKRWRLDI+YSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Sbjct: 241 KFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EF VL AEKE ERR+  KKRG
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKKRG 327

[Close]

BLAST of Pay0018923 vs. ExPASy TrEMBL
Match: A0A6J1EXY1 (exosome complex component RRP4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111437483 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.3e-157
Identity = 280/325 (86.15%), Postives = 304/325 (93.54%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDLN
Sbjct: 1   MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVTEVAPKRWRLDI+YSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Sbjct: 241 KFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKK 326
           HEMLG EF VL AEKE ERR+  KK
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKK 325

[Close]

BLAST of Pay0018923 vs. ExPASy TrEMBL
Match: A0A6J1HGD9 (exosome complex component RRP4 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464056 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.1e-156
Identity = 283/327 (86.54%), Postives = 301/327 (92.05%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MR LQI LN TQ+ RL+ A + LES+SSKAN DASV V DT+P +Y+DGVLKGHGTLDLN
Sbjct: 1   MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVTEVAPKRWRL+I+YSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNINYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLI GCNGFIWIG+HVD T+D MIEDQVNK EQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEG FGNQ+ ERV+TPLETRQNICRTANAIRVLS LGFI+TVEVIMETVSLS SLNINV
Sbjct: 241 KFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EF VL AEKE ERR+  KKRG
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKKRG 327

[Close]

BLAST of Pay0018923 vs. NCBI nr
Match: XP_008464390.1 (PREDICTED: exosome complex component RRP4 homolog [Cucumis melo])

HSP 1 Score: 646.0 bits (1665), Expect = 1.8e-181
Identity = 326/327 (99.69%), Postives = 326/327 (99.69%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM
Sbjct: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV
Sbjct: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EFFVLVAEKEVERRSCRKKRG
Sbjct: 301 HEMLGSEFFVLVAEKEVERRSCRKKRG 327

[Close]

BLAST of Pay0018923 vs. NCBI nr
Match: KAA0057748.1 (exosome complex component RRP4-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 643.7 bits (1659), Expect = 8.8e-181
Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN
Sbjct: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRAR-YKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVL 120
           GEVVTTICGVVERVNKLIYVRSLRAR YKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVL
Sbjct: 61  GEVVTTICGVVERVNKLIYVRSLRARLYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVL 120

Query: 121 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERG 180
           MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERG
Sbjct: 121 MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERG 180

Query: 181 QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG 240
           QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG
Sbjct: 181 QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG 240

Query: 241 SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN 300
           SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN
Sbjct: 241 SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN 300

Query: 301 VHEMLGLEFFVLVAEKEVERRSCRKKRG 328
           VHEMLGLEFFVLVAEKEVERRSCRKKRG
Sbjct: 301 VHEMLGLEFFVLVAEKEVERRSCRKKRG 328

[Close]

BLAST of Pay0018923 vs. NCBI nr
Match: XP_023533481.1 (exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo] >XP_023533482.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 568.5 bits (1464), Expect = 3.6e-158
Identity = 282/327 (86.24%), Postives = 305/327 (93.27%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDLN
Sbjct: 1   MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVTEVAPKRWRLDI+YSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEGNFGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSL ISLNI+V
Sbjct: 241 KFEGNFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLGISLNIDV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EF VL AEKE ERR+  KKRG
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKKRG 327

[Close]

BLAST of Pay0018923 vs. NCBI nr
Match: KAG6606437.1 (Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568.2 bits (1463), Expect = 4.7e-158
Identity = 282/327 (86.24%), Postives = 306/327 (93.58%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDLN
Sbjct: 1   MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVTEVAPKRWRLDI+YSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Sbjct: 241 KFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EF VL AEKE ERR+  KKRG
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKKRG 327

[Close]

BLAST of Pay0018923 vs. NCBI nr
Match: XP_022995373.1 (exosome complex component RRP4 homolog [Cucurbita maxima] >XP_022995374.1 exosome complex component RRP4 homolog [Cucurbita maxima] >XP_022995375.1 exosome complex component RRP4 homolog [Cucurbita maxima] >XP_022995376.1 exosome complex component RRP4 homolog [Cucurbita maxima])

HSP 1 Score: 565.1 bits (1455), Expect = 4.0e-157
Identity = 281/327 (85.93%), Postives = 305/327 (93.27%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MRGLQ+ LN TQ+ RL+ A +TLES+SSKAN DASV V DT+P +YEDGVLKGHGTLDL 
Sbjct: 1   MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLY 60

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GEVV TICGVVERVNKLIYVR+LRARYKPE+GDI+VGRVTEVAPKRWRLDI+YSQDAVLM
Sbjct: 61  GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLM 120

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180
           LSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ 180

Query: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKGS 240
           LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG+HVD T+D M+ED +NK EQKGS
Sbjct: 181 LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGS 240

Query: 241 KFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNINV 300
           KFEG+FGNQ+ ER++TPLETRQNICRTANAIRVLSILGFI++VEVIMETVSLSISLNI+V
Sbjct: 241 KFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV 300

Query: 301 HEMLGLEFFVLVAEKEVERRSCRKKRG 328
           HEMLG EF VL AEKE ERR+  KKRG
Sbjct: 301 HEMLGSEFCVLTAEKEAERRTSSKKRG 327

[Close]

BLAST of Pay0018923 vs. TAIR 10
Match: AT1G03360.1 (ribosomal RNA processing 4 )

HSP 1 Score: 409.8 bits (1052), Expect = 2.0e-114
Identity = 208/327 (63.61%), Postives = 261/327 (79.82%), Query Frame = 0


Query: 1   MRGLQIFLNHTQQTRLKNAQKTLESLSSKANYDASVAVGDTVPFSYEDGVLKGHGTLDLN 60
           MR LQ+ L+ TQ+ R + A + L+SLSS AN DASV V D++P +++D  LKGHGT +++
Sbjct: 3   MRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62

Query: 61  GEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLM 120
           GE++ T+CGVVERV+KL+YVR+LRARYKPE+GDIVVGRV EVA KRWR++++++QD VLM
Sbjct: 63  GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122

Query: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERG 180
           LSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182

Query: 181 QLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKHVDSTQDTMIEDQVNKIEQKG 240
           QLL V PYLVKR K HFH++E  GIDLI+GCNGFIW+G+HV+      I+DQ ++ E   
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDE-EMIS 242

Query: 241 SKFEGNFGNQMHERVHTPLETRQNICRTANAIRVLSILGFIITVEVIMETVSLSISLNIN 300
           S   G       E+ H PLETRQ ICR  NAIRVLS LGF +T+EVIMETV+LS S NI+
Sbjct: 243 SSSTGK------EQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNID 302

Query: 301 VHEMLGLEFFVLVAEKEVERRSCRKKR 327
           +H+MLG EF V+VAE E ERR  ++K+
Sbjct: 303 IHDMLGSEFHVVVAENEAERRRTKRKK 322

The following BLAST results are available for this feature:

BLAST of Pay0018923 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVT7	2.8e-113	63.61	Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 P...	[more]
Q09704	2.3e-46	43.81	Exosome complex component rrp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q8VBV3	5.6e-45	49.27	Exosome complex component RRP4 OS=Mus musculus OX=10090 GN=Exosc2 PE=1 SV=1	[more]
Q2KID0	1.2e-44	48.78	Exosome complex component RRP4 OS=Bos taurus OX=9913 GN=EXOSC2 PE=2 SV=1	[more]
Q13868	3.6e-44	49.27	Exosome complex component RRP4 OS=Homo sapiens OX=9606 GN=EXOSC2 PE=1 SV=2	[more]

BLAST of Pay0018923 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLC6	8.6e-182	99.69	exosome complex component RRP4 homolog OS=Cucumis melo OX=3656 GN=LOC103502293 P...	[more]
A0A5A7URG7	4.3e-181	99.70	Exosome complex component RRP4-like protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1K7S0	1.9e-157	85.93	exosome complex component RRP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114909...	[more]
A0A6J1EXY1	4.3e-157	86.15	exosome complex component RRP4 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HGD9	2.1e-156	86.54	exosome complex component RRP4 homolog isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Pay0018923 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464390.1	1.8e-181	99.69	PREDICTED: exosome complex component RRP4 homolog [Cucumis melo]	[more]
KAA0057748.1	8.8e-181	99.70	exosome complex component RRP4-like protein [Cucumis melo var. makuwa]	[more]
XP_023533481.1	3.6e-158	86.24	exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo] >XP_02353348...	[more]
KAG6606437.1	4.7e-158	86.24	Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022995373.1	4.0e-157	85.93	exosome complex component RRP4 homolog [Cucurbita maxima] >XP_022995374.1 exosom...	[more]

BLAST of Pay0018923 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03360.1	2.0e-114	63.61	ribosomal RNA processing 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	GENE3D	2.40.50.100		coord: 36..87 e-value: 1.1E-16 score: 62.1
None	No IPR available	GENE3D	2.40.50.140		coord: 88..177 e-value: 1.1E-18 score: 68.9
None	No IPR available	PANTHER	PTHR21321:SF4	EXOSOME COMPLEX COMPONENT RRP4	coord: 11..320
None	No IPR available	CDD	cd05789	S1_Rrp4	coord: 86..176 e-value: 2.94152E-33 score: 116.11
None	No IPR available	SUPERFAMILY	110324	Ribosomal L27 protein-like	coord: 37..85
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 90..169 e-value: 4.3E-4 score: 29.6
IPR004088	K Homology domain, type 1	PFAM	PF15985	KH_6	coord: 179..219 e-value: 1.0E-12 score: 48.3
IPR026699	Exosome complex RNA-binding protein 1/RRP40/RRP4	PANTHER	PTHR21321	PNAS-3 RELATED	coord: 11..320
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 179..322
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 85..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018923.1	Pay0018923.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0000178	exosome (RNase complex)
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003723	RNA binding