Pay0018397 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018397
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr11: 16758489 .. 16760406 (+)
RNA-Seq Expression	Pay0018397
Synteny	Pay0018397

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGGCCCTTCAAATTGTTGAAAGAAAGGAGATTGATCCGAGAAGAAGAGGAAAGGAAAAAGGAAGAGAGAATGAGAAGGATGAAGGGTGAAGGAAGACAAAGAAATAATAAAAAAGGAATGCGCCTGAAGGAGAAGAAGGTAGAGAAGAGGGTTTGAGCGATGATACCACTCATCTCTGCCAAACCTTGACAAAAAAAACTTAAGAATGTAGGGTCCCTAGACGAAAGTAATGTGTTTAAAGTTTATGGGTAAAGACTCAAGGTGTATTATGAAGATGAAAATCACATCAAATAGTCCATATACATAATCTAAAACACCTTCATTTACATTTCCTTAACGTGTTGATGCGTTTGTACACTATCATTTATTGTAATGCAATCGTATCATTTTTGTGCATCGTATTTAATCACTTTCTTAACTTTTTTTTTCCTTATTTTCAATTTATTACATCTTTCATTTCTTTTCTTTTTGTTTATCACTTTCTTTGATTGCTTTCTTTACTACTTTCTTTATCACTTTCTAGGTAGAGTAGTTAGAATATTTTGTGCCTGCGAGGACCACAAAGGGGATTTTAGCATTTGAATGTGTTCTGTTAGAAGGCATGTGAAGCATAATTAGGCAATAGGATGGATAGTTTCCCGCCAAAAATTTAGTATTGCCTACAGAGTTGTGTCTAGTGATGTGGATTTTAAACAGTCACATTAAATACAACAGTCATTTATACTTTCAAAGGGACATGCCGCCAATGTGTTAGATCTCATTAAATAAGCTAAAAACTCATTATTATAGAGTCAACACTCGTTAAGTATAAAGAGCGAAGGAAAACCCATGTTTGCCTCATTTATATTCTTGAGCCCTCTCGAAAAAATTTGTTCTCTTTTTGAGTGTTCATCACCCTCATCTAAAAATTCATCACCCTCACCGGAAAACTCAACCACTTCGCTAGAAAACTCAAATCTTCATCGGAATCCTATGGTCGAGCAACAAAAAACCCATCGTGAAGCTCCTCTGACTTCCAAATTCCTTAAGACTAAGGAGAAATCTTCAAGCACCGCTCTGACGAAAAAGCCACTCACCAAAACACCCAACCCTTCTACCCAAAAACCTAATGAATCTTCACCTCATGGGTCTAGAACTGAAGGCTCTACGTGGAAGATCTCAATCAAGTCCAAACCTTTAGAAACCCTCCCCAATTTGCGTTCTGATAAACCTATTTCAAAGCGAGCTCAATGCCCATTAACCCAAGAGCCAATCTCATCAGCAAGTGATTGAATAATAGAAGAGGAGAAAATGTTTAGAGGGCTTAGTGACCTGAACCAAGTCAGAAAGGATGGCTAAAACATGGTGAACCAACTGCAGCTAAGCTACACCAACCTCAAACATGAAAAAGAGAAGGTGTTGGTGGGCACAGGTGGACCAATCCTTGGAATTGTAGTAGGCTAAGAAGATTAGGCGACTCTTGAAATTGTTGAAAGAAAGAAGATTGATCCCAGAATAAGAGGAAAGGAAAAAGGAAGAGACAATGAGAAGGGTGAAGGAAGACAAAGAAATAAGAAAAAGGGAACGTGCCTAGAGGAGAAGAAAGCAAGAGAAGAGGGTTTAAGCGATGATACCACTCATCTCTACAAAACCTTGGTAAAAAAAACTTTTGAATTTAGGGTCCTTGGTGGAGACGAAGAAGAAGTTGGCAGAGATCCACACCGCTAAGAAAAAGAAGGAGAAGAGAAAGCAAAAGAAGCTCACGGCACTAGGTGAGCAAGGAGTTCACCACCTGAAGATATTGATGGCAAAGTTAGATGAAGAGTTGGAGAAAATGAACCCACTGGAACAGAGACTAGCACTTGAAGATTCGAGTTTGGAGACAATCACAAAGAAAAAACTGAAAAACAAAGTTAGGGCCATCCAAACATGA

mRNA sequence

ATGAGGCGGCCCTTCAAATTGTTGAAAGAAAGGAGATTGATCCGAGAAGAAGAGGAAAGGAAAAAGGAAGAGAGAATGAGAAGGATGAAGGGTGAAGGAAGACAAAGAAATAATAAAAAAGGAATGCGCCTGAAGGAGAAGAAGTGTTCATCACCCTCATCTAAAAATTCATCACCCTCACCGGAAAACTCAACCACTTCGCTAGAAAACTCAAATCTTCATCGGAATCCTATGGTCGAGCAACAAAAAACCCATCGTGAAGCTCCTCTGACTTCCAAATTCCTTAAGACTAAGGAGAAATCTTCAAGCACCGCTCTGACGAAAAAGCCACTCACCAAAACACCCAACCCTTCTACCCAAAAACCTAATGAATCTTCACCTCATGGGTCTAGAACTGAAGGCTCTACGTGGAAGATCTCAATCAAGTCCAAACCTTTAGAAACCCTCCCCAATTTGCGTTCTGATAAACCTATTTCAAAGCGAGCTCAATGCCCATTAACCCAAGAGCCAATCTCATCAGCAAGGTCCTTGGTGGAGACGAAGAAGAAGTTGGCAGAGATCCACACCGCTAAGAAAAAGAAGGAGAAGAGAAAGCAAAAGAAGCTCACGGCACTAGGTGAGCAAGGAGTTCACCACCTGAAGATATTGATGGCAAAGTTAGATGAAGAGTTGGAGAAAATGAACCCACTGGAACAGAGACTAGCACTTGAAGATTCGAGTTTGGAGACAATCACAAAGAAAAAACTGAAAAACAAAGTTAGGGCCATCCAAACATGA

Coding sequence (CDS)

ATGAGGCGGCCCTTCAAATTGTTGAAAGAAAGGAGATTGATCCGAGAAGAAGAGGAAAGGAAAAAGGAAGAGAGAATGAGAAGGATGAAGGGTGAAGGAAGACAAAGAAATAATAAAAAAGGAATGCGCCTGAAGGAGAAGAAGTGTTCATCACCCTCATCTAAAAATTCATCACCCTCACCGGAAAACTCAACCACTTCGCTAGAAAACTCAAATCTTCATCGGAATCCTATGGTCGAGCAACAAAAAACCCATCGTGAAGCTCCTCTGACTTCCAAATTCCTTAAGACTAAGGAGAAATCTTCAAGCACCGCTCTGACGAAAAAGCCACTCACCAAAACACCCAACCCTTCTACCCAAAAACCTAATGAATCTTCACCTCATGGGTCTAGAACTGAAGGCTCTACGTGGAAGATCTCAATCAAGTCCAAACCTTTAGAAACCCTCCCCAATTTGCGTTCTGATAAACCTATTTCAAAGCGAGCTCAATGCCCATTAACCCAAGAGCCAATCTCATCAGCAAGGTCCTTGGTGGAGACGAAGAAGAAGTTGGCAGAGATCCACACCGCTAAGAAAAAGAAGGAGAAGAGAAAGCAAAAGAAGCTCACGGCACTAGGTGAGCAAGGAGTTCACCACCTGAAGATATTGATGGCAAAGTTAGATGAAGAGTTGGAGAAAATGAACCCACTGGAACAGAGACTAGCACTTGAAGATTCGAGTTTGGAGACAATCACAAAGAAAAAACTGAAAAACAAAGTTAGGGCCATCCAAACATGA

Protein sequence

MRRPFKLLKERRLIREEEERKKEERMRRMKGEGRQRNNKKGMRLKEKKCSSPSSKNSSPSPENSTTSLENSNLHRNPMVEQQKTHREAPLTSKFLKTKEKSSSTALTKKPLTKTPNPSTQKPNESSPHGSRTEGSTWKISIKSKPLETLPNLRSDKPISKRAQCPLTQEPISSARSLVETKKKLAEIHTAKKKKEKRKQKKLTALGEQGVHHLKILMAKLDEELEKMNPLEQRLALEDSSLETITKKKLKNKVRAIQT

Homology

The following BLAST results are available for this feature:

BLAST of Pay0018397 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0018397 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0018397 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0018397 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 213..233
None	No IPR available	COILS	Coil	Coil	coord: 7..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018397.1	Pay0018397.1	mRNA