Pay0017586 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017586
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	50S ribosomal protein L27-like
Location	chr05: 372586 .. 375662 (+)
RNA-Seq Expression	Pay0017586
Synteny	Pay0017586

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGGCGGCCTTCTTCATCTTCTCATCTGCGATTCACGAACGGCCACCACCACCGTCCTCCTTCATCATTCGGCGATTCACGAACCACACCACCACCTAACCATTCGGCATTCAAGGTTTGTCTTTTCATTTCTGTTTTAATTTCCATAACTTATTTGTTTCAACTTCAATTTGTAAGTTAATATTAAATTTAAGTTAGATTTAGAAATATGTTCAACTAAATTAGCATCTTAACAATCAACACGAAGCTTTTTTTTTTTTTTTAGTAGATTACATTTCTATCCTAGTTTTCTAGAGATTAATGTATCACTGTCATCGTATCTCTATCTCACATCACACTTTTTAGTTTTCAAATCTAGAAACATTTTTCAAAATAAATATTTTCACCAAAACTTGATTAGGTCTTGGAGACTCTGATTTTTTGGTTTTTTCCATATTGCTAAAAAAAAAAAAAAAAACGGAAAAATTGTACAGATACATGGGTTTGGATTCATTTCTCACCAAAACCTTTACATTTAGATTAGAATCAGGGAAGTCCCTGTTGACTATGTCAAAAGTCATCTCTATGATCAAGTTTAATTATTCTCTTCTTTTCCTTCAATTTCCGTTCATCAATAGATTTGTTAGCAATGGGGAAGGTCTCTAGTATTTGCCTATCGTTATCAAGGTTGATTGAAATTCCATATTAGTGTAAAGGAGGAATGAGGATGGACTTGAGTACTTTTAAATGCACTCTAGCTGCAATCTTACTTGCAAACTGAATAAGACTGATAAGTGATAACTGATAGGTTTGTTGTCATTGTCGGATTTGGCATTTCTTTCTTCAATGCAAATTTAAGTTTCATTGAGGCTATCATAAAAGATCAATTTTCAAAAAAGTCTTGGAACTCCGTCGGGTTAGGTTATGTTTGATGATGCTCTATGAGTTTTTTAGAACTTCAACTGTGTAGAAAACCTGTGTAGAAAACTTATTTTTCCTCTAACTGGTGACTGCTAGGTGTCTTTTCTAGTCAGCTTAGGGCTACTTTTTGCTTAGTGTAAGATCCACTTCTTGAAAGGAAGTAAGAACCCCCTGTAGTGTTGAGCTGATTATTAACTTCTATAAGTTCAGTCTTGATTTCCACTGCCATGGAATTTTTTTCTAAGTCCACTGTCATGGACATAAGGCCCCATTTTGAAAAAAAAACAAAATGGTTATCAAATGTGGCCCAAGTACTTTTGATTTTTGAAATGCTTCAATTTTGTTGTTACAGAATAATTAATAGTGTTTTCCATTAAAAAAAGAAAAGAAAATAAATAGAACTAATAATGCTAGTGAGTATTGTATGATAGAACCCAAACAACTAGAATATTGTCCAAATATTATTCTTACTCAACAGTCAAGCTTACAGCCACAAAACAATTGTCTATGTTCCTCTCTTCCCACTCTCTTTATATATAATCAATTCTAATAACTTTTAGAACTCAAGGACACAATTCTACAACCTATAGAACAACTCCTGTTCAAATAAGTTAGTTACATATTCAATTCAAATTGCATACTCTTTGGATTATTACTCTTATGGATTTAATAATTATTTATTCATTACTTGTTTGTTAAGCAATTTTTTTCTTCTTTAATTTTATTATATAAATTGTTACGTGCTTTCGCTAGGCATTGGTTGAAGCATTTGAATGGATATCTTTTTGACACTTTCACGTTGGTTTACAATATCCAAGTCTGTTTCTTGAATTTGAGTTGTTAACCATGAAGGATTTAAAAGATGCAACCTTTTGAAAAAGTTGTTGGAGGTTTGTCACAAAGTTTTTCATAAGATATTAATAGTTGGCCATGGCCTGTTATTAGAATATGCAGATCGCTTCTTGAACTAGATTATGTAATATAGTAGATTTATATTGGAAGTTGTTCATTTGATCTTGTTGAACTATGTTTTACATGTGTTAAGTGTCTTGTGACGAATGTTCAGGATAAACTACGTATACAACCATGCTTAATATTGCGACCTCGTTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTCCTGTATATAGCAGTTTTAGTGGTAAGAATGGTTCATCTAGAACATGTTGTACTTATCATGCTAATTTGTCTTCATATTTTGGTGATTACATTGTTTGTTGAATCTAATCTCAGATGGAGCTACTGCTGGATTAAACTTATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCGACTAAAAATGGACGAGACTCAAAACCCAAGAATCTTGGTGTAAAGAAATTTGGTGGGGAGGTGAGTGGCAGGACAAACAAAAATCACATTGTCATAAACTTGCACTGAAATTTCTATTTATCGAAGCGGTTTTGTTGTGAACTTATTTATGGAGAGTTATTCCTTCTGGATACAGAGAGTTATTCCCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTCGAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCAAAGGATGGGCACGTTCTGCATCCTGTTTATGCAACTACTTCTACTTCTCCACAATTGAAGACAACAGCATAATCTTTGGTGCTCTGTTGATGAACATGATCGTCAATGGTATAAATTTTAACCAAAGTCAATTCCCTAGGGAGGAGGAGGGGGTTGTAGGCAGTCTCTTTAAGAGACGTTTTTAATGTTTACCATTTATTTTTCTGGAAAGCCTATTGAATTTCACTTTAACCAATATGGATACGATGGATGTCCGCTTCTAGCTCGATGTGCTTAAAAATGGGATTGATGAAGAGAGAAATTTCCCTTGTAATTAAGTTGCCTCTTTTAAGTAAGTCAAGATGTGCGAAGAATTATAGGTATACTCTCGAGGGAATTTTAGGTCCTCTTTTAACCTCCTCCCCTTACAAGGAATATTTTCTTTCTTGACATTTCAAATAGTTGGTTTAATAATATCCAATGTCCATCATAACATTAGTCTTTACAAATCAATCTTCTGATAGCAACC

mRNA sequence

ATCGGCGGCCTTCTTCATCTTCTCATCTGCGATTCACGAACGGCCACCACCACCGTCCTCCTTCATCATTCGGCGATTCACGAACCACACCACCACCTAACCATTCGGCATTCAAGGATAAACTACGTATACAACCATGCTTAATATTGCGACCTCGTTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTCCTGTATATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTTATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCGACTAAAAATGGACGAGACTCAAAACCCAAGAATCTTGGTGTAAAGAAATTTGGTGGGGAGAGAGTTATTCCCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTCGAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCAAAGGATGGGCACGTTCTGCATCCTGTTTATGCAACTACTTCTACTTCTCCACAATTGAAGACAACAGCATAATCTTTGGTGCTCTGTTGATGAACATGATCGTCAATGGTATAAATTTTAACCAAAGTCAATTCCCTAGGGAGGAGGAGGGGGTTGTAGGCAGTCTCTTTAAGAGACGTTTTTAATGTTTACCATTTATTTTTCTGGAAAGCCTATTGAATTTCACTTTAACCAATATGGATACGATGGATGTCCGCTTCTAGCTCGATGTGCTTAAAAATGGGATTGATGAAGAGAGAAATTTCCCTTGTAATTAAGTTGCCTCTTTTAAGTAAGTCAAGATGTGCGAAGAATTATAGGTATACTCTCGAGGGAATTTTAGGTCCTCTTTTAACCTCCTCCCCTTACAAGGAATATTTTCTTTCTTGACATTTCAAATAGTTGGTTTAATAATATCCAATGTCCATCATAACATTAGTCTTTACAAATCAATCTTCTGATAGCAACC

Coding sequence (CDS)

ATGCTTAATATTGCGACCTCGTTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTCCTGTATATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTTATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCGACTAAAAATGGACGAGACTCAAAACCCAAGAATCTTGGTGTAAAGAAATTTGGTGGGGAGAGAGTTATTCCCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTCGAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCAAAGGATGGGCACGTTCTGCATCCTGTTTATGCAACTACTTCTACTTCTCCACAATTGAAGACAACAGCATAA

Protein sequence

MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

Homology

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BLAST of Pay0017586 vs. ExPASy Swiss-Prot
Match: A9IM57 (50S ribosomal protein L27 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=rpmA PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.7e-26
Identity = 59/83 (71.08%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 43  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 102
           A KK  GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VGIGKDHTLFA
Sbjct: 2   AHKKAGGSSRNGRDSESKRLGVKKFGGESVIAGNIIVRQRGTRWHPGDNVGIGKDHTLFA 61

Query: 103 LKEGNVKFEKHKLSGRKWVHVIP 126
           L EG V F++ K   R +V VIP
Sbjct: 62  LSEGKVSFQR-KAGNRSYVSVIP 83

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BLAST of Pay0017586 vs. ExPASy Swiss-Prot
Match: Q6G507 (50S ribosomal protein L27 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) OX=283166 GN=rpmA PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-25
Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 43  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 102
           A KK  GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VGIGKDHTLFA
Sbjct: 2   AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIAGNIIVRQRGTRWHPGDNVGIGKDHTLFA 61

Query: 103 LKEGNVKFEKHKLSGRKWVHVIP 126
           L +G V F++ K + R +V VIP
Sbjct: 62  LSKGMVSFQR-KANNRSYVSVIP 83

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BLAST of Pay0017586 vs. ExPASy Swiss-Prot
Match: B4RZH4 (50S ribosomal protein L27 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rpmA PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.5e-25
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 43  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 102
           A KK  GSTKNGRDS+ K LGVK+FGGE V+ GNIIVRQRGTRFH GD +GIGKDHTLFA
Sbjct: 2   AHKKAGGSTKNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTRFHAGDNMGIGKDHTLFA 61

Query: 103 LKEGNVKFEKHKLSGRKWVHVI 125
           LK+G V+F+      RK+V ++
Sbjct: 62  LKDGKVQFDVKGPKNRKFVSIV 83

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BLAST of Pay0017586 vs. ExPASy Swiss-Prot
Match: A6UDV3 (50S ribosomal protein L27 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=rpmA PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.5e-25
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 43  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 102
           A KK  GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGT++HPG  VG+GKDHT+FA
Sbjct: 2   AHKKAGGSSRNGRDSESKRLGVKKFGGENVIAGNIIVRQRGTKWHPGANVGLGKDHTIFA 61

Query: 103 LKEGNVKFEKHKLSGRKWVHVIPK 127
           L  GNV F K K +GR +V V+PK
Sbjct: 62  LTAGNVDFRK-KANGRVYVSVMPK 84

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BLAST of Pay0017586 vs. ExPASy Swiss-Prot
Match: Q92LB7 (50S ribosomal protein L27 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.5e-25
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 43  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 102
           A KK  GS++NGRDS+ K LGVKKFGGE VIPGNIIVRQRGT++H G  VG+GKDHT+FA
Sbjct: 2   AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIPGNIIVRQRGTKWHAGANVGLGKDHTIFA 61

Query: 103 LKEGNVKFEKHKLSGRKWVHVIPK 127
           L  GNV F K K +GR +V V+PK
Sbjct: 62  LTTGNVDFRK-KANGRVYVSVMPK 84

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BLAST of Pay0017586 vs. ExPASy TrEMBL
Match: A0A5A7TXR2 (50S ribosomal protein L27-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00530 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.8e-79
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VHVIPKDGHVLHPVYATTSTSPQLKTTA
Sbjct: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 148

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BLAST of Pay0017586 vs. ExPASy TrEMBL
Match: A0A1S4E0A6 (50S ribosomal protein L27-like OS=Cucumis melo OX=3656 GN=LOC107991330 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.8e-79
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VHVIPKDGHVLHPVYATTSTSPQLKTTA
Sbjct: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 148

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BLAST of Pay0017586 vs. ExPASy TrEMBL
Match: A0A0A0LIQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023860 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.5e-74
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
            LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEK+KLSGRKW
Sbjct: 61  YLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKNKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VHVIPK+GHVLHPVY TTSTS QLKT A
Sbjct: 121 VHVIPKEGHVLHPVYETTSTSLQLKTAA 148

[Close]

BLAST of Pay0017586 vs. ExPASy TrEMBL
Match: A0A6J1I390 (uncharacterized protein LOC111469515 OS=Cucurbita maxima OX=3661 GN=LOC111469515 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGSAGGLSLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG VKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGCVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VH+IPK+GHVLHPVYATT  SP+LKT A
Sbjct: 121 VHIIPKEGHVLHPVYATTDISPELKTAA 148

[Close]

BLAST of Pay0017586 vs. ExPASy TrEMBL
Match: A0A6J1HP14 (uncharacterized protein LOC111464705 OS=Cucurbita moschata OX=3662 GN=LOC111464705 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 134/146 (91.78%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSF DG+  GL+LLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFIDGSAGGLSLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG VKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGCVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKT 147
           VH+IPK+GHVLHPVYATT  SP+LKT
Sbjct: 121 VHIIPKEGHVLHPVYATTDISPELKT 146

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BLAST of Pay0017586 vs. NCBI nr
Match: XP_016901663.1 (PREDICTED: 50S ribosomal protein L27-like [Cucumis melo] >KAA0047990.1 50S ribosomal protein L27-like [Cucumis melo var. makuwa])

HSP 1 Score: 304.3 bits (778), Expect = 5.8e-79
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VHVIPKDGHVLHPVYATTSTSPQLKTTA
Sbjct: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 148

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BLAST of Pay0017586 vs. NCBI nr
Match: XP_004139171.1 (uncharacterized protein LOC101207653 [Cucumis sativus] >KGN60919.1 hypothetical protein Csa_023482 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 7.3e-74
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
            LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEK+KLSGRKW
Sbjct: 61  YLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKNKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VHVIPK+GHVLHPVY TTSTS QLKT A
Sbjct: 121 VHVIPKEGHVLHPVYETTSTSLQLKTAA 148

[Close]

BLAST of Pay0017586 vs. NCBI nr
Match: XP_022970580.1 (uncharacterized protein LOC111469515 [Cucurbita maxima] >XP_022970581.1 uncharacterized protein LOC111469515 [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 2.8e-73
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGSAGGLSLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG VKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGCVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTTA 149
           VH+IPK+GHVLHPVYATT  SP+LKT A
Sbjct: 121 VHIIPKEGHVLHPVYATTDISPELKTAA 148

[Close]

BLAST of Pay0017586 vs. NCBI nr
Match: XP_038877023.1 (50S ribosomal protein L27-like [Benincasa hispida])

HSP 1 Score: 283.9 bits (725), Expect = 8.1e-73
Identity = 135/147 (91.84%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVT VPVYSSFSDGA  GL+LLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTTVPVYSSFSDGAATGLSLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERV PGNIIVRQRGTRFHPGDYVG+GKDHTLFALKEG V FEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVTPGNIIVRQRGTRFHPGDYVGMGKDHTLFALKEGCVNFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKTT 148
           VHVIPK+GHVLHP+YATTSTSP+LKTT
Sbjct: 121 VHVIPKEGHVLHPIYATTSTSPELKTT 147

[Close]

BLAST of Pay0017586 vs. NCBI nr
Match: XP_022964702.1 (uncharacterized protein LOC111464705 [Cucurbita moschata] >XP_022964703.1 uncharacterized protein LOC111464705 [Cucurbita moschata] >XP_022964704.1 uncharacterized protein LOC111464705 [Cucurbita moschata] >XP_023520403.1 uncharacterized protein LOC111783717 [Cucurbita pepo subsp. pepo] >XP_023520404.1 uncharacterized protein LOC111783717 [Cucurbita pepo subsp. pepo] >KAG7019178.1 rpmA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.0 bits (720), Expect = 3.1e-72
Identity = 134/146 (91.78%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MLNIATSFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPK 60
           MLNIAT+FCKRLNVKDLVTNVPVYSSF DG+  GL+LLFRRWATKKTAGSTKNGRDSKPK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFIDGSAGGLSLLFRRWATKKTAGSTKNGRDSKPK 60

Query: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKW 120
           NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG VKFEKHKLSGRKW
Sbjct: 61  NLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGCVKFEKHKLSGRKW 120

Query: 121 VHVIPKDGHVLHPVYATTSTSPQLKT 147
           VH+IPK+GHVLHPVYATT  SP+LKT
Sbjct: 121 VHIIPKEGHVLHPVYATTDISPELKT 146

[Close]

BLAST of Pay0017586 vs. TAIR 10
Match: AT5G15220.1 (Ribosomal protein L27 family protein )

HSP 1 Score: 224.6 bits (571), Expect = 5.4e-59
Identity = 107/151 (70.86%), Postives = 128/151 (84.77%), Query Frame = 0


Query: 2   LNIATSFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKP 61
           LN A S C+R+++++L+T VP Y  SS SDG+++GL+L+F+RWATKKTAGSTKNGRDS P
Sbjct: 4   LNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVFKRWATKKTAGSTKNGRDSNP 63

Query: 62  KNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRK 121
           K LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG V+FEK K++GRK
Sbjct: 64  KFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRK 123

Query: 122 WVHVIPKDGHVLHPVY--ATTSTSPQLKTTA 149
           W+HV P  GHVLHP+Y  A  + S +LKT +
Sbjct: 124 WIHVDPTGGHVLHPIYTKAAAAQSTKLKTAS 154

[Close]

BLAST of Pay0017586 vs. TAIR 10
Match: AT2G16930.2 (Ribosomal protein L27 family protein )

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-57
Identity = 105/151 (69.54%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 2   LNIATSFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKP 61
           LN A S C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDS P
Sbjct: 4   LNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRDSNP 63

Query: 62  KNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRK 121
           K LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG V+FEK K++GRK
Sbjct: 64  KFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRK 123

Query: 122 WVHVIPKDGHVLHPVY--ATTSTSPQLKTTA 149
           W+HV P  GHVLHP+Y  A  + S +L T +
Sbjct: 124 WIHVDPIGGHVLHPIYTKAAAAKSTKLNTAS 154

[Close]

BLAST of Pay0017586 vs. TAIR 10
Match: AT2G16930.1 (Ribosomal protein L27 family protein )

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-57
Identity = 105/151 (69.54%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 2   LNIATSFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKP 61
           LN A S C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDS P
Sbjct: 4   LNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRDSNP 63

Query: 62  KNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRK 121
           K LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG V+FEK K++GRK
Sbjct: 64  KFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRK 123

Query: 122 WVHVIPKDGHVLHPVY--ATTSTSPQLKTTA 149
           W+HV P  GHVLHP+Y  A  + S +L T +
Sbjct: 124 WIHVDPIGGHVLHPIYTKAAAAKSTKLNTAS 154

[Close]

BLAST of Pay0017586 vs. TAIR 10
Match: AT2G16930.3 (Ribosomal protein L27 family protein )

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-57
Identity = 105/151 (69.54%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 2   LNIATSFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKP 61
           LN A S C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDS P
Sbjct: 4   LNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRDSNP 63

Query: 62  KNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRK 121
           K LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEG V+FEK K++GRK
Sbjct: 64  KFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRK 123

Query: 122 WVHVIPKDGHVLHPVY--ATTSTSPQLKTTA 149
           W+HV P  GHVLHP+Y  A  + S +L T +
Sbjct: 124 WIHVDPIGGHVLHPIYTKAAAAKSTKLNTAS 154

[Close]

BLAST of Pay0017586 vs. TAIR 10
Match: AT5G40950.1 (ribosomal protein large subunit 27 )

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-20
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 43  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 102
           A KK AGSTKNGRDS  + LGVK +G +   PG IIVRQRGT+FH G  VGIGKDHT+F+
Sbjct: 59  AHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFS 118

Query: 103 LKEGNVKFEKHKLSGRKWVHVIPKD 128
           L +G VKFEK     RK + V P++
Sbjct: 119 LIDGLVKFEKFG-PDRKKISVYPRE 142

The following BLAST results are available for this feature:

BLAST of Pay0017586 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9IM57	7.7e-26	71.08	50S ribosomal protein L27 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)...	[more]
Q6G507	2.9e-25	69.88	50S ribosomal protein L27 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 ...	[more]
B4RZH4	6.5e-25	67.07	50S ribosomal protein L27 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 11...	[more]
A6UDV3	6.5e-25	67.86	50S ribosomal protein L27 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=...	[more]
Q92LB7	8.5e-25	67.86	50S ribosomal protein L27 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rpmA ...	[more]

BLAST of Pay0017586 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXR2	2.8e-79	99.32	50S ribosomal protein L27-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S4E0A6	2.8e-79	99.32	50S ribosomal protein L27-like OS=Cucumis melo OX=3656 GN=LOC107991330 PE=3 SV=1	[more]
A0A0A0LIQ3	3.5e-74	94.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023860 PE=3 SV=1	[more]
A0A6J1I390	1.3e-73	91.89	uncharacterized protein LOC111469515 OS=Cucurbita maxima OX=3661 GN=LOC111469515...	[more]
A0A6J1HP14	1.5e-72	91.78	uncharacterized protein LOC111464705 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]

BLAST of Pay0017586 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901663.1	5.8e-79	99.32	PREDICTED: 50S ribosomal protein L27-like [Cucumis melo] >KAA0047990.1 50S ribos...	[more]
XP_004139171.1	7.3e-74	94.59	uncharacterized protein LOC101207653 [Cucumis sativus] >KGN60919.1 hypothetical ...	[more]
XP_022970580.1	2.8e-73	91.89	uncharacterized protein LOC111469515 [Cucurbita maxima] >XP_022970581.1 uncharac...	[more]
XP_038877023.1	8.1e-73	91.84	50S ribosomal protein L27-like [Benincasa hispida]	[more]
XP_022964702.1	3.1e-72	91.78	uncharacterized protein LOC111464705 [Cucurbita moschata] >XP_022964703.1 unchar...	[more]

BLAST of Pay0017586 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15220.1	5.4e-59	70.86	Ribosomal protein L27 family protein	[more]
AT2G16930.2	1.7e-57	69.54	Ribosomal protein L27 family protein	[more]
AT2G16930.1	1.7e-57	69.54	Ribosomal protein L27 family protein	[more]
AT2G16930.3	1.7e-57	69.54	Ribosomal protein L27 family protein	[more]
AT5G40950.1	3.8e-20	60.00	ribosomal protein large subunit 27	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001684	Ribosomal protein L27	PRINTS	PR00063	RIBOSOMALL27	coord: 95..119 score: 47.08 coord: 45..69 score: 63.85 coord: 70..94 score: 57.38
IPR001684	Ribosomal protein L27	TIGRFAM	TIGR00062	TIGR00062	coord: 43..123 e-value: 4.9E-35 score: 117.4
IPR001684	Ribosomal protein L27	PFAM	PF01016	Ribosomal_L27	coord: 43..123 e-value: 3.5E-37 score: 126.3
IPR001684	Ribosomal protein L27	PANTHER	PTHR15893	RIBOSOMAL PROTEIN L27	coord: 2..147
IPR001684	Ribosomal protein L27	HAMAP	MF_00539	Ribosomal_L27	coord: 42..126 score: 26.032824
None	No IPR available	GENE3D	2.40.50.100		coord: 47..144 e-value: 1.5E-32 score: 113.9
None	No IPR available	PANTHER	PTHR15893:SF9	50S RIBOSOMAL PROTEIN L27-LIKE	coord: 2..147
None	No IPR available	SUPERFAMILY	110324	Ribosomal L27 protein-like	coord: 43..123
IPR018261	Ribosomal protein L27, conserved site	PROSITE	PS00831	RIBOSOMAL_L27	coord: 75..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017586.1	Pay0017586.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0003735	structural constituent of ribosome