Pay0017133 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017133
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr06: 27273819 .. 27276648 (-)
RNA-Seq Expression	Pay0017133
Synteny	Pay0017133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTTTATTGTGATAATATGAGTACAATTAATATTTCAAAGAACCATGTTCATCATAGTAGGACCAAACACATTGATATTAGGCATCATTTTATCAGGAAACTTATTGAAGGGAAAATTGTTACTCTCGAGCATGTTTGTTCAAATCTTCAACTGGCTGATATCTTTACTAAACCACTGGATGCGAGCTCATTTGAGCATTTGAAAGCTGGTTTAGGTGTTTGCAAGATTTATTTTTTAAAAAAAAATTAAATAAATGAGACGTGAAGAAAGTGTTATGGCCCTTTATTTATGGCCACGTCTGCAAGGGTCTATTTAATTAATTTTAGTTGTTTTAAGCGAGAAGGTTCTTTTTCGTTTAATGTTCCATCAACTTTAAGAAACTCCTTCATCTTCGCGTTCATCACAACTCACGTTCTTGAAGTTCCTCATGAAAATGGCAAACACTCATAGAGGCAAATATCGAGCTCGCTCGACTAAAGTTGTTTCTGAAGGTTTTGACTCTAGAACCAACATGCATGGAGTTTGAATGAGAAGTCATCGTTTCAAGAGTACTCCTTCTCGGAGATCCTATCGGTCGCCTTTTGTGAAAAATTAGGTATCTCCTTCTGATAGTTCAAGTGTGCCATTGCATGATGATAATCTTACTAAAATTGCTTCTGAAAATGTCAAATCTGAGCATGTTCCCACTGAGTCTCATTTTTCTGCTATGCATTCTAGGGGTGTAAGAATAAGCCGAACAACCCGATAACCCGGACTACCGAACCCATATTATATGAGTTGGGTTGGGTTAGTTTAAAATGTGGGTTGGGTTGGGTTGAAAATTTTAGTTTTTTTCGGGTTAGGTTGGGTCTCGGGTTGGGGGTTGAAAAATTTGGGTCAACCCAATCCAACTCGAATTAATAAATTTTATATATATTTATTTATATTTTTATTATAGATATTTTATTATTTATATGGAAAATGTTTAAAATATTGAACTTTTATGGATATTTGAAACTTTGAATTTATAGATGTTTGAAACTTTGGATATGAGTGTTTATCGACATCGTACAACAATTTTAAACCGTACAAACATCAAGAATGAAAAAATAATAATACAATCCGGTAACCCAACCCAACCAACCCATATTTTAAGGGTTGGGATGGGTTGGTTAGGAATATAATATGGGTTATTCGGGTTGTCAACTCAACCAACCCGAAAATATGGGTTAGGTTGGAAATGTCCCTCAACCCAACCCGTTTACACCCCTAATGCATTCTGATTAGAGGGATGATGTACCTTTAGCTAGTGTATTAGAATAGGGTTTGTTTAAAAAGGCCTCTCATCCATCTGATGGTCTTGAGTCGGCTACAGCTAGTTCTCCTACCCCATCTATACATTCTGATAGTAGTTCTTCTTAGAATATTTTCATTCCAACCCCTGGTCAGCCTTCAACTGCTAATGAGAATCCTGAACAAACTAGTCATTCCCCTCCTGCTCAGTCTTTTGTGTTGAATCCCCCTGTTGATATTCAAGAATCTGTTCCTAAATATGAACTGGTGAGTCAATCTACTGATGGGCTTGATGAAAATGTTGAACTAAATGATAATAATACACCTCCTGATGATGACCCAAATGTGAGTGTCGCTACATTCGAGTTAGACCCACCTCCTGCAGACCCGAAACCAAAGGCCAAGAAAACCTAATAGGGACGTCGTATGGTGACTACCAAAACTAGTTGAAAAACAATACCTCCGAATATTTGATCTGTACCCATTGATAGAATCTCATTTCATTTAGAAGAGAGTGTTTAGAGATGGAAGTATGTCGTATAGAGGCAAATTGCTGATGAAGTAAATGTGTTTGATAAGCATCACTGTGTTTGAGCATTATGGATTTGGTGGTTAAAGCTGGGCTCTCTAAAACTATTTCCAATGTAGGTCCCTTTTATCCTCAATTGATTAGGAAGTTCATTGTGAATTTGCCTTCAGAATTCAAGGATTCAAGCAACCTTGACTATCAAACTATCCATATTCGGGACTATGTTGAAGATTTCTCCTGCTATCATCAATGGTTTTTTGGAAAACATTGTGGTGTTTGGTTCTCAGTCTTCATATCTATTTAATGATGAGAATTGGCATCTGTCTTATCTAGAAGAACATTGTCAGTTGGCCGGTGAATGAGATTGCAGCTATTTTTCTAAGTGTTAAATATGCCATTCTCCATAAGATTGGCATTGCTAATTGGTTCCCTTCCTCGCATGCTTCTAGTGTTTATGTGGCTCTAGGAACATTTCCGTATCAAATGTGTAATGATGAATATGTCGATGTTGGACTTTTTTTTATATATAATCAGTTGTTGAGCCATGTTGGAACGTTTGATGTGAAGATTTCTATTCCTCTGCCTCGGTTCTTCTCAAGCTTACTAATTCATATAAATGCTAATATCTTGACTGCTAATGATGCCCTTGGTTCTGATCCGAAGACCTTGTATTTGAGTTATAGACTATTTCAAGGTAGTAATGTTGCTGACTTAGAACATGGTATGAGGCCCTCTAGAAACCCTCGTGTGTATGATATAGATGACTCTGCTGAAGGATTTTTTGTTCCTTGTGATTTAGCTTCAAAAATTATCAACACTCTCACGAATGAATCTCGAGCTCTTTCAACATCTATAAATATGTTATCTAGTAGAAGATTGGAGGTCGATTCTCTTGTTCGCCATCTCAAGACTCTTATTCCTTCTTCTAGTGCGGTTGATCAGGCTCAAGAAAAGACATTTCTTTTATGTTCAAAGGGGGAGAAGAGTTTTGTGCATATTTGTTTTGATGGGCCATCTGAATGA

mRNA sequence

ATGACTCTTTATTGTGATAATATGAGTACAATTAATATTTCAAAGAACCATGTTCATCATAGTAGGACCAAACACATTGATATTAGGCATCATTTTATCAGGAAACTTATTGAAGGGAAAATTGTTACTCTCGAGCATGTTTGTTCAAATCTTCAACTGGCTGATATCTTTACTAAACCACTGGATGCGAGCTCATTTGAGCATTTGAAAGCTGGTTTAGGTGTATCTCCTTCTGATAGTTCAAGTGTGCCATTGCATGATGATAATCTTACTAAAATTGCTTCTGAAAATGTCAAATCTGAGCATGTTCCCACTGAGTCTCATTTTTCTGCTATGCATTCTAGGGAATCTGTTCCTAAATATGAACTGGTGAGTCAATCTACTGATGGGCTTGATGAAAATGTTGAACTAAATGATAATAATACACCTCCTGATGATGACCCAAATGTGAGTGTCGCTACATTCGAGTTAGACCCACCTCCTGCAGACCCGAAACCAAAGAGGCAAATTGCTGATGAAGTAAATGTGTTTGATAAGCATCACTGTATTTCTCCTGCTATCATCAATGGTTTTTTGGAAAACATTGTGGTGTTTGGTTCTCATTGGCCGGTGAATGAGATTGCAGCTATTTTTCTAAGTGTTAAATATGCCATTCTCCATAAGATTGGCATTGCTAATTGGTTCCCTTCCTCGCATGCTTCTAGTGTTTATTTGTTGAGCCATGTTGGAACGTTTGATGTGAAGATTTCTATTCCTCTGCCTCGGTTCTTCTCAAGCTTACTAATTCATATAAATGCTAATATCTTGACTGCTAATGATGCCCTTGGTTCTGATCCGAAGACCTTGTATTTGAGTTATAGACTATTTCAAGGTAGTAATGTTGCTGACTTAGAACATGGTATGAGGCCCTCTAGAAACCCTCGTGTGTATGATATAGATGACTCTGCTGAAGGATTTTTTGTTCCTTGTGATTTAGCTTCAAAAATTATCAACACTCTCACGAATGAATCTCGAGCTCTTTCAACATCTATAAATATGTTATCTAGTAGAAGATTGGAGGTCGATTCTCTTGTTCGCCATCTCAAGACTCTTATTCCTTCTTCTAGTGCGGTTGATCAGGCTCAAGAAAAGACATTTCTTTTATGTTCAAAGGGGGAGAAGAGTTTTGTGCATATTTGTTTTGATGGGCCATCTGAATGA

Coding sequence (CDS)

ATGACTCTTTATTGTGATAATATGAGTACAATTAATATTTCAAAGAACCATGTTCATCATAGTAGGACCAAACACATTGATATTAGGCATCATTTTATCAGGAAACTTATTGAAGGGAAAATTGTTACTCTCGAGCATGTTTGTTCAAATCTTCAACTGGCTGATATCTTTACTAAACCACTGGATGCGAGCTCATTTGAGCATTTGAAAGCTGGTTTAGGTGTATCTCCTTCTGATAGTTCAAGTGTGCCATTGCATGATGATAATCTTACTAAAATTGCTTCTGAAAATGTCAAATCTGAGCATGTTCCCACTGAGTCTCATTTTTCTGCTATGCATTCTAGGGAATCTGTTCCTAAATATGAACTGGTGAGTCAATCTACTGATGGGCTTGATGAAAATGTTGAACTAAATGATAATAATACACCTCCTGATGATGACCCAAATGTGAGTGTCGCTACATTCGAGTTAGACCCACCTCCTGCAGACCCGAAACCAAAGAGGCAAATTGCTGATGAAGTAAATGTGTTTGATAAGCATCACTGTATTTCTCCTGCTATCATCAATGGTTTTTTGGAAAACATTGTGGTGTTTGGTTCTCATTGGCCGGTGAATGAGATTGCAGCTATTTTTCTAAGTGTTAAATATGCCATTCTCCATAAGATTGGCATTGCTAATTGGTTCCCTTCCTCGCATGCTTCTAGTGTTTATTTGTTGAGCCATGTTGGAACGTTTGATGTGAAGATTTCTATTCCTCTGCCTCGGTTCTTCTCAAGCTTACTAATTCATATAAATGCTAATATCTTGACTGCTAATGATGCCCTTGGTTCTGATCCGAAGACCTTGTATTTGAGTTATAGACTATTTCAAGGTAGTAATGTTGCTGACTTAGAACATGGTATGAGGCCCTCTAGAAACCCTCGTGTGTATGATATAGATGACTCTGCTGAAGGATTTTTTGTTCCTTGTGATTTAGCTTCAAAAATTATCAACACTCTCACGAATGAATCTCGAGCTCTTTCAACATCTATAAATATGTTATCTAGTAGAAGATTGGAGGTCGATTCTCTTGTTCGCCATCTCAAGACTCTTATTCCTTCTTCTAGTGCGGTTGATCAGGCTCAAGAAAAGACATTTCTTTTATGTTCAAAGGGGGAGAAGAGTTTTGTGCATATTTGTTTTGATGGGCCATCTGAATGA

Protein sequence

MTLYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLDASSFEHLKAGLGVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHSRESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVATFELDPPPADPKPKRQIADEVNVFDKHHCISPAIINGFLENIVVFGSHWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVYLLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDALGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTNESRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQEKTFLLCSKGEKSFVHICFDGPSE

Homology

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BLAST of Pay0017133 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-11
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 3    LYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLD 62
            +Y DN   I+I+ N   H R KHIDI++HF R+ ++  ++ LE++ +  QLADIFTKPL 
Sbjct: 1328 IYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLP 1387

Query: 63   ASSFEHLKAGLGVSPSDSSS 83
            A+ F  L+  LG+   D S+
Sbjct: 1388 AARFVELRDKLGLLQDDQSN 1407

[Close]

BLAST of Pay0017133 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-09
Identity = 28/73 (38.36%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 3    LYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLD 62
            +YCD+ S I++SKN ++H+RTKHID+R+H+IR++++ + + +  + +N   AD+ TK + 
Sbjct: 1253 VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVP 1312

Query: 63   ASSFEHLKAGLGV 76
             + FE  K  +G+
Sbjct: 1313 RNKFELCKELVGM 1325

[Close]

BLAST of Pay0017133 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-09
Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 3    LYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLD 62
            +YCDN+    +  N V HSR KHI I +HFIR  ++   + + HV ++ QLAD  TKPL 
Sbjct: 1388 IYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLS 1447

Query: 63   ASSFEHLKAGLGVS 77
             ++F++  + +GV+
Sbjct: 1448 RTAFQNFASKIGVT 1461

[Close]

BLAST of Pay0017133 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-08
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 3    LYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLD 62
            +YCDN+    +  N V HSR KHI + +HFIR  ++   + + HV ++ QLAD  TKPL 
Sbjct: 1371 IYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLS 1430

Query: 63   ASSFEHLKAGLGV 76
              +F++    +GV
Sbjct: 1431 RVAFQNFSRKIGV 1443

[Close]

BLAST of Pay0017133 vs. ExPASy TrEMBL
Match: A0A5A7TUQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00250 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 7.7e-116
Identity = 255/384 (66.41%), Postives = 269/384 (70.05%), Query Frame = 0


Query: 74  GVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHSR------------------ 133
           GVSPSDSSS+PLHDDNLTKIA ENVKSEHVPTESHFSAMH R                  
Sbjct: 29  GVSPSDSSSLPLHDDNLTKIAPENVKSEHVPTESHFSAMHFRGNIFIPTPGQPSTANENP 88

Query: 134 ---------------------ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVAT 193
                                ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVAT
Sbjct: 89  EQTSHSPPAQSFVLNPPVDIQESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVAT 148

Query: 194 FEL--------------DPPPADPKPKRQ-IADEVNVF-DKHHCISPAIINGFLENIVVF 253
            ++              +  P  P+  R+ I +  + F D  +     I     +NIV  
Sbjct: 149 SDIMDLVVKAGLSKTISNVGPFYPQLIREFIVNLPSEFKDSSNLDCQTIHIRDYKNIV-- 208

Query: 254 GSHWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVY--------------------- 313
              WPVNEIA IFLSVKYAILHKIGIANWFPSSHASSVY                     
Sbjct: 209 --SWPVNEIATIFLSVKYAILHKIGIANWFPSSHASSVYVALGTFPYQMCNDEYVDVGLF 268

Query: 314 -----LLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDALGSDPKTLYLSYRLFQGS 373
                LLSHVGTFDVKISIPLPRFFSSLLIH+NA+IL+AN+ALGSDPKTLYLSYRLFQGS
Sbjct: 269 FIYNQLLSHVGTFDVKISIPLPRFFSSLLIHMNADILSANNALGSDPKTLYLSYRLFQGS 328

Query: 374 NVADLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTNESRALSTSINMLSSRRL 377
           NV DLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLT  SRALSTSINMLSSRRL
Sbjct: 329 NVPDLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTTGSRALSTSINMLSSRRL 388

[Close]

BLAST of Pay0017133 vs. ExPASy TrEMBL
Match: A0A5D3BYL4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001030 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 3.6e-113
Identity = 243/359 (67.69%), Postives = 249/359 (69.36%), Query Frame = 0


Query: 74  GVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHSR------------------ 133
           GVSPSDSSS+PLHDDNLTKIA ENVKSEHVPTESHFSAMH R                  
Sbjct: 29  GVSPSDSSSLPLHDDNLTKIAPENVKSEHVPTESHFSAMHFRGPSTANENPEQTSHSPPA 88

Query: 134 ------------ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVATFELDPPPAD 193
                       ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPN              
Sbjct: 89  QSFVLNPPVDIQESVPKYELVSQSTDGLDENVELNDNNTPPDDDPN-------------- 148

Query: 194 PKPKRQIADEVNVFDKHHCISPAIINGFLENIVVFGSHWPVNEIAAIFLSVKYAILHKIG 253
                                        +NIV     WPVNEIA IFLSVKYAILHKIG
Sbjct: 149 -----------------------------KNIV----SWPVNEIATIFLSVKYAILHKIG 208

Query: 254 IANWFPSSHASSVY--------------------------LLSHVGTFDVKISIPLPRFF 313
           IANWFPSSHASSVY                          LLSHVGTFDVKISIPLPRFF
Sbjct: 209 IANWFPSSHASSVYVALGTFPYQMCNDEYVDVGLFFIYNQLLSHVGTFDVKISIPLPRFF 268

Query: 314 SSLLIHINANILTANDALGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVYDIDDSAE 373
           SSLLIH+NA+IL+AN+ALGSDPKTLYLSYRLFQGSNV DLEHGMRPSRNPRVYDIDDSAE
Sbjct: 269 SSLLIHMNADILSANNALGSDPKTLYLSYRLFQGSNVPDLEHGMRPSRNPRVYDIDDSAE 328

Query: 374 GFFVPCDLASKIINTLTNESRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 377
           GFFVPCDLASKIINTLT  SRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE
Sbjct: 329 GFFVPCDLASKIINTLTTGSRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 340

[Close]

BLAST of Pay0017133 vs. ExPASy TrEMBL
Match: A0A1S3CS01 (uncharacterized protein LOC103504037 OS=Cucumis melo OX=3656 GN=LOC103504037 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 6.3e-110
Identity = 259/458 (56.55%), Postives = 289/458 (63.10%), Query Frame = 0


Query: 1   MTLYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKP 60
           MTLYCDNMS I+ISKN V  SRTKHIDIRHHFIR LIEGKIVTLEHV SNLQL D+FTKP
Sbjct: 1   MTLYCDNMSAIDISKNPVQQSRTKHIDIRHHFIRDLIEGKIVTLEHVHSNLQLTDMFTKP 60

Query: 61  LDASSFEHLKAGLGVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHS--RESV 120
           LD   FE  +    VSPS+SSSV LHDDN+ ++  ENV+ + VP+ESH S M S  R+ V
Sbjct: 61  LDL-PFEKNQ----VSPSNSSSVSLHDDNVIEVDPENVEFKCVPSESHLSVMDSDERDDV 120

Query: 121 PKYELVSQS--------------------------------TDGLDENVELNDNNTPPDD 180
           P   L+ +S                                ++GLDENVE N NN PPDD
Sbjct: 121 PLVSLLKESLLKKGSRLSDNIVSTVTPAPFVRPDSSSSQNLSNGLDENVEPNVNNAPPDD 180

Query: 181 DPNVSVATFELDPPPADPKPK----------RQIADEVNVFDKHHC-------------- 240
           D NVS+   E   PPAD KPK          RQI DEVNVFDKHH               
Sbjct: 181 DSNVSIPASESVLPPADSKPKAKETQKGRHMRQIGDEVNVFDKHHSCLSIMDLIVKAGLS 240

Query: 241 -----ISPAIINGFLENIVVFGSH--------------------WPVNEIAAIFLSVKYA 300
                ISPAIINGFL N VV  S                     WP+N I A+ LSVKY 
Sbjct: 241 KTIFNISPAIINGFLGNTVVSSSQSSHPSNDELASVLSKDTLLVWPLNGILAVSLSVKYV 300

Query: 301 ILHKIGIANWFPSSHA---SSVYLLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDA 360
           ILHKIGIAN FPS HA   S+V ++       VK  IPLPRFFS+LLIH+NANILTANDA
Sbjct: 301 ILHKIGIANLFPSWHALSVSTVLVVKACWNVGVKTPIPLPRFFSNLLIHLNANILTANDA 360

Query: 361 LGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVY---DIDDSAEGFFVPCDLASKIIN 370
              DPK L LSYRLFQGS+V +L+H  RP RNPRV+   DI+DSAEGFFVPCDLAS+II+
Sbjct: 361 PRPDPKALSLSYRLFQGSHVPNLKHDKRPYRNPRVFDTNDINDSAEGFFVPCDLASRIIS 420

[Close]

BLAST of Pay0017133 vs. ExPASy TrEMBL
Match: A0A5A7THX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00810 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 6.8e-104
Identity = 252/461 (54.66%), Postives = 282/461 (61.17%), Query Frame = 0


Query: 8   MSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLDASSFE 67
           MS I+ISKN V  SRTKHIDIRHHFIR LIEGKIVTLEHV SNLQL D+FTKPLD   FE
Sbjct: 1   MSAIDISKNPVQQSRTKHIDIRHHFIRDLIEGKIVTLEHVHSNLQLTDMFTKPLDL-PFE 60

Query: 68  HLKAGLGVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHS--RESVPKYELVS 127
             +    VSPS+SSSV LHDDN+ ++  ENV+ + VP+ESH S M S  R+ VP   L+ 
Sbjct: 61  KNQ----VSPSNSSSVSLHDDNVIEVDPENVEFKCVPSESHLSVMDSDERDDVPLVSLLK 120

Query: 128 QS--------------------------------TDGLDENVELNDNNTPPDDDPNVSVA 187
           +S                                ++GLDENVE N NN PPDDD NVS+ 
Sbjct: 121 ESLLKKGSRLSDNIVSTVTPAPFVRPDSSSSQNLSNGLDENVEPNVNNAPPDDDSNVSIP 180

Query: 188 TFELDPPPADPKPK----------RQIADEVNVFDKHHC--------------------- 247
             E   PPAD KPK          RQI DEVNVFDKHH                      
Sbjct: 181 ASESVLPPADSKPKAKETQKGRHMRQIGDEVNVFDKHHSCLSIMDLIVKAGLSKTIFNTV 240

Query: 248 --------ISPAIINGFLENIVVFGSH--------------------WPVNEIAAIFLSV 307
                   ISPAIINGFL N VV  S                     WP+N I A+ LSV
Sbjct: 241 HIRGRMFKISPAIINGFLGNTVVSSSQSSHPSNDELASVLSKDTLLVWPLNGILAVSLSV 300

Query: 308 KYAILHKIGIANWFPSSHA---SSVYLLSHVGTFDVKISIPLPRFFSSLLIHINANILTA 367
           KY ILHKIGIAN FPS HA   S+V ++       VK  IPLPRFFS+LLIH+NANILTA
Sbjct: 301 KYVILHKIGIANLFPSWHALSVSTVLVVKACWNVGVKTPIPLPRFFSNLLIHLNANILTA 360

Query: 368 NDALGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVY---DIDDSAEGFFVPCDLASK 370
           NDA   DPK L LSYRLFQGS+V +L+H  RP RNPRV+   DI+DSAEGFFVPCDLAS+
Sbjct: 361 NDAPRPDPKALSLSYRLFQGSHVPNLKHDKRPYRNPRVFDTNDINDSAEGFFVPCDLASR 420

[Close]

BLAST of Pay0017133 vs. ExPASy TrEMBL
Match: A0A1S3BT17 (uncharacterized protein LOC103493426 OS=Cucumis melo OX=3656 GN=LOC103493426 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 5.9e-84
Identity = 170/215 (79.07%), Postives = 178/215 (82.79%), Query Frame = 0


Query: 188 INGFLENIVVFGSHWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVY---------- 247
           I  ++E+   +   WPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVY          
Sbjct: 48  IRDYVEDFSCYHQCWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVYVALGTFPYQM 107

Query: 248 ----------------LLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDALGSDPKT 307
                           LLSHVGTFDVKISIPLPRFFSSLLIH+NA+IL+AN+ALGSDPKT
Sbjct: 108 CNDEYVDVGLFFIYNQLLSHVGTFDVKISIPLPRFFSSLLIHMNADILSANNALGSDPKT 167

Query: 308 LYLSYRLFQGSNVADLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTNESRALS 367
           LYLSYRLFQGSNV DLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLT  SRALS
Sbjct: 168 LYLSYRLFQGSNVPDLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTTGSRALS 227

Query: 368 TSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 377
           TSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE
Sbjct: 228 TSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 262

[Close]

BLAST of Pay0017133 vs. NCBI nr
Match: KAA0046870.1 (uncharacterized protein E6C27_scaffold230G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 427.2 bits (1097), Expect = 1.6e-115
Identity = 255/384 (66.41%), Postives = 269/384 (70.05%), Query Frame = 0


Query: 74  GVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHSR------------------ 133
           GVSPSDSSS+PLHDDNLTKIA ENVKSEHVPTESHFSAMH R                  
Sbjct: 29  GVSPSDSSSLPLHDDNLTKIAPENVKSEHVPTESHFSAMHFRGNIFIPTPGQPSTANENP 88

Query: 134 ---------------------ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVAT 193
                                ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVAT
Sbjct: 89  EQTSHSPPAQSFVLNPPVDIQESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVAT 148

Query: 194 FEL--------------DPPPADPKPKRQ-IADEVNVF-DKHHCISPAIINGFLENIVVF 253
            ++              +  P  P+  R+ I +  + F D  +     I     +NIV  
Sbjct: 149 SDIMDLVVKAGLSKTISNVGPFYPQLIREFIVNLPSEFKDSSNLDCQTIHIRDYKNIV-- 208

Query: 254 GSHWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVY--------------------- 313
              WPVNEIA IFLSVKYAILHKIGIANWFPSSHASSVY                     
Sbjct: 209 --SWPVNEIATIFLSVKYAILHKIGIANWFPSSHASSVYVALGTFPYQMCNDEYVDVGLF 268

Query: 314 -----LLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDALGSDPKTLYLSYRLFQGS 373
                LLSHVGTFDVKISIPLPRFFSSLLIH+NA+IL+AN+ALGSDPKTLYLSYRLFQGS
Sbjct: 269 FIYNQLLSHVGTFDVKISIPLPRFFSSLLIHMNADILSANNALGSDPKTLYLSYRLFQGS 328

Query: 374 NVADLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTNESRALSTSINMLSSRRL 377
           NV DLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLT  SRALSTSINMLSSRRL
Sbjct: 329 NVPDLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTTGSRALSTSINMLSSRRL 388

[Close]

BLAST of Pay0017133 vs. NCBI nr
Match: TYK03276.1 (uncharacterized protein E5676_scaffold298G001030 [Cucumis melo var. makuwa])

HSP 1 Score: 418.3 bits (1074), Expect = 7.4e-113
Identity = 243/359 (67.69%), Postives = 249/359 (69.36%), Query Frame = 0


Query: 74  GVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHSR------------------ 133
           GVSPSDSSS+PLHDDNLTKIA ENVKSEHVPTESHFSAMH R                  
Sbjct: 29  GVSPSDSSSLPLHDDNLTKIAPENVKSEHVPTESHFSAMHFRGPSTANENPEQTSHSPPA 88

Query: 134 ------------ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPNVSVATFELDPPPAD 193
                       ESVPKYELVSQSTDGLDENVELNDNNTPPDDDPN              
Sbjct: 89  QSFVLNPPVDIQESVPKYELVSQSTDGLDENVELNDNNTPPDDDPN-------------- 148

Query: 194 PKPKRQIADEVNVFDKHHCISPAIINGFLENIVVFGSHWPVNEIAAIFLSVKYAILHKIG 253
                                        +NIV     WPVNEIA IFLSVKYAILHKIG
Sbjct: 149 -----------------------------KNIV----SWPVNEIATIFLSVKYAILHKIG 208

Query: 254 IANWFPSSHASSVY--------------------------LLSHVGTFDVKISIPLPRFF 313
           IANWFPSSHASSVY                          LLSHVGTFDVKISIPLPRFF
Sbjct: 209 IANWFPSSHASSVYVALGTFPYQMCNDEYVDVGLFFIYNQLLSHVGTFDVKISIPLPRFF 268

Query: 314 SSLLIHINANILTANDALGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVYDIDDSAE 373
           SSLLIH+NA+IL+AN+ALGSDPKTLYLSYRLFQGSNV DLEHGMRPSRNPRVYDIDDSAE
Sbjct: 269 SSLLIHMNADILSANNALGSDPKTLYLSYRLFQGSNVPDLEHGMRPSRNPRVYDIDDSAE 328

Query: 374 GFFVPCDLASKIINTLTNESRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 377
           GFFVPCDLASKIINTLT  SRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE
Sbjct: 329 GFFVPCDLASKIINTLTTGSRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 340

[Close]

BLAST of Pay0017133 vs. NCBI nr
Match: XP_008466685.1 (PREDICTED: uncharacterized protein LOC103504037 [Cucumis melo])

HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-109
Identity = 259/458 (56.55%), Postives = 289/458 (63.10%), Query Frame = 0


Query: 1   MTLYCDNMSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKP 60
           MTLYCDNMS I+ISKN V  SRTKHIDIRHHFIR LIEGKIVTLEHV SNLQL D+FTKP
Sbjct: 1   MTLYCDNMSAIDISKNPVQQSRTKHIDIRHHFIRDLIEGKIVTLEHVHSNLQLTDMFTKP 60

Query: 61  LDASSFEHLKAGLGVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHS--RESV 120
           LD   FE  +    VSPS+SSSV LHDDN+ ++  ENV+ + VP+ESH S M S  R+ V
Sbjct: 61  LDL-PFEKNQ----VSPSNSSSVSLHDDNVIEVDPENVEFKCVPSESHLSVMDSDERDDV 120

Query: 121 PKYELVSQS--------------------------------TDGLDENVELNDNNTPPDD 180
           P   L+ +S                                ++GLDENVE N NN PPDD
Sbjct: 121 PLVSLLKESLLKKGSRLSDNIVSTVTPAPFVRPDSSSSQNLSNGLDENVEPNVNNAPPDD 180

Query: 181 DPNVSVATFELDPPPADPKPK----------RQIADEVNVFDKHHC-------------- 240
           D NVS+   E   PPAD KPK          RQI DEVNVFDKHH               
Sbjct: 181 DSNVSIPASESVLPPADSKPKAKETQKGRHMRQIGDEVNVFDKHHSCLSIMDLIVKAGLS 240

Query: 241 -----ISPAIINGFLENIVVFGSH--------------------WPVNEIAAIFLSVKYA 300
                ISPAIINGFL N VV  S                     WP+N I A+ LSVKY 
Sbjct: 241 KTIFNISPAIINGFLGNTVVSSSQSSHPSNDELASVLSKDTLLVWPLNGILAVSLSVKYV 300

Query: 301 ILHKIGIANWFPSSHA---SSVYLLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDA 360
           ILHKIGIAN FPS HA   S+V ++       VK  IPLPRFFS+LLIH+NANILTANDA
Sbjct: 301 ILHKIGIANLFPSWHALSVSTVLVVKACWNVGVKTPIPLPRFFSNLLIHLNANILTANDA 360

Query: 361 LGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVY---DIDDSAEGFFVPCDLASKIIN 370
              DPK L LSYRLFQGS+V +L+H  RP RNPRV+   DI+DSAEGFFVPCDLAS+II+
Sbjct: 361 PRPDPKALSLSYRLFQGSHVPNLKHDKRPYRNPRVFDTNDINDSAEGFFVPCDLASRIIS 420

[Close]

BLAST of Pay0017133 vs. NCBI nr
Match: KAA0041656.1 (uncharacterized protein E6C27_scaffold93G001360 [Cucumis melo var. makuwa] >TYJ97972.1 uncharacterized protein E5676_scaffold234G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 387.5 bits (994), Expect = 1.4e-103
Identity = 252/461 (54.66%), Postives = 282/461 (61.17%), Query Frame = 0


Query: 8   MSTINISKNHVHHSRTKHIDIRHHFIRKLIEGKIVTLEHVCSNLQLADIFTKPLDASSFE 67
           MS I+ISKN V  SRTKHIDIRHHFIR LIEGKIVTLEHV SNLQL D+FTKPLD   FE
Sbjct: 1   MSAIDISKNPVQQSRTKHIDIRHHFIRDLIEGKIVTLEHVHSNLQLTDMFTKPLDL-PFE 60

Query: 68  HLKAGLGVSPSDSSSVPLHDDNLTKIASENVKSEHVPTESHFSAMHS--RESVPKYELVS 127
             +    VSPS+SSSV LHDDN+ ++  ENV+ + VP+ESH S M S  R+ VP   L+ 
Sbjct: 61  KNQ----VSPSNSSSVSLHDDNVIEVDPENVEFKCVPSESHLSVMDSDERDDVPLVSLLK 120

Query: 128 QS--------------------------------TDGLDENVELNDNNTPPDDDPNVSVA 187
           +S                                ++GLDENVE N NN PPDDD NVS+ 
Sbjct: 121 ESLLKKGSRLSDNIVSTVTPAPFVRPDSSSSQNLSNGLDENVEPNVNNAPPDDDSNVSIP 180

Query: 188 TFELDPPPADPKPK----------RQIADEVNVFDKHHC--------------------- 247
             E   PPAD KPK          RQI DEVNVFDKHH                      
Sbjct: 181 ASESVLPPADSKPKAKETQKGRHMRQIGDEVNVFDKHHSCLSIMDLIVKAGLSKTIFNTV 240

Query: 248 --------ISPAIINGFLENIVVFGSH--------------------WPVNEIAAIFLSV 307
                   ISPAIINGFL N VV  S                     WP+N I A+ LSV
Sbjct: 241 HIRGRMFKISPAIINGFLGNTVVSSSQSSHPSNDELASVLSKDTLLVWPLNGILAVSLSV 300

Query: 308 KYAILHKIGIANWFPSSHA---SSVYLLSHVGTFDVKISIPLPRFFSSLLIHINANILTA 367
           KY ILHKIGIAN FPS HA   S+V ++       VK  IPLPRFFS+LLIH+NANILTA
Sbjct: 301 KYVILHKIGIANLFPSWHALSVSTVLVVKACWNVGVKTPIPLPRFFSNLLIHLNANILTA 360

Query: 368 NDALGSDPKTLYLSYRLFQGSNVADLEHGMRPSRNPRVY---DIDDSAEGFFVPCDLASK 370
           NDA   DPK L LSYRLFQGS+V +L+H  RP RNPRV+   DI+DSAEGFFVPCDLAS+
Sbjct: 361 NDAPRPDPKALSLSYRLFQGSHVPNLKHDKRPYRNPRVFDTNDINDSAEGFFVPCDLASR 420

[Close]

BLAST of Pay0017133 vs. NCBI nr
Match: XP_008452365.1 (PREDICTED: uncharacterized protein LOC103493426 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.2e-83
Identity = 170/215 (79.07%), Postives = 178/215 (82.79%), Query Frame = 0


Query: 188 INGFLENIVVFGSHWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVY---------- 247
           I  ++E+   +   WPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVY          
Sbjct: 48  IRDYVEDFSCYHQCWPVNEIAAIFLSVKYAILHKIGIANWFPSSHASSVYVALGTFPYQM 107

Query: 248 ----------------LLSHVGTFDVKISIPLPRFFSSLLIHINANILTANDALGSDPKT 307
                           LLSHVGTFDVKISIPLPRFFSSLLIH+NA+IL+AN+ALGSDPKT
Sbjct: 108 CNDEYVDVGLFFIYNQLLSHVGTFDVKISIPLPRFFSSLLIHMNADILSANNALGSDPKT 167

Query: 308 LYLSYRLFQGSNVADLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTNESRALS 367
           LYLSYRLFQGSNV DLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLT  SRALS
Sbjct: 168 LYLSYRLFQGSNVPDLEHGMRPSRNPRVYDIDDSAEGFFVPCDLASKIINTLTTGSRALS 227

Query: 368 TSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 377
           TSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE
Sbjct: 228 TSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 262

The following BLAST results are available for this feature:

BLAST of Pay0017133 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04146	1.7e-11	43.75	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	1.6e-09	38.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	2.7e-09	40.54	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.3e-08	39.73	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Pay0017133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUQ0	7.7e-116	66.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BYL4	3.6e-113	67.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CS01	6.3e-110	56.55	uncharacterized protein LOC103504037 OS=Cucumis melo OX=3656 GN=LOC103504037 PE=...	[more]
A0A5A7THX8	6.8e-104	54.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BT17	5.9e-84	79.07	uncharacterized protein LOC103493426 OS=Cucumis melo OX=3656 GN=LOC103493426 PE=...	[more]

BLAST of Pay0017133 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046870.1	1.6e-115	66.41	uncharacterized protein E6C27_scaffold230G00250 [Cucumis melo var. makuwa]	[more]
TYK03276.1	7.4e-113	67.69	uncharacterized protein E5676_scaffold298G001030 [Cucumis melo var. makuwa]	[more]
XP_008466685.1	1.3e-109	56.55	PREDICTED: uncharacterized protein LOC103504037 [Cucumis melo]	[more]
KAA0041656.1	1.4e-103	54.66	uncharacterized protein E6C27_scaffold93G001360 [Cucumis melo var. makuwa] >TYJ9...	[more]
XP_008452365.1	1.2e-83	79.07	PREDICTED: uncharacterized protein LOC103493426 [Cucumis melo]	[more]

BLAST of Pay0017133 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 2..75
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 2..75
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1..61 e-value: 1.36245E-30 score: 112.562

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017133.1	Pay0017133.1	mRNA