Pay0016880 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016880
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Growth-regulating factor
Location	chr04: 29857158 .. 29859421 (-)
RNA-Seq Expression	Pay0016880
Synteny	Pay0016880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTACCTCCTCTTCCGGTTTCCCCCTCCGGTGCAACTCACAATTAAAGCCATACACACACACACACACACACTCTCTCACAAAATCCCATTCCCCCAAATTCACCCCCCAAGATAAGAACACCATACCTCTTCTTACTTCTTCCCTTCTCCGATCACAATCCCCAATCCCGATATGCGAATCAGAAAACGCCAGCTCCCATTACCGGCCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCATCTCCCCTCCTCCTCCTCCTCCTCCGATCCTCCCATTAATCCCTTGGTTAGTATATTTATTCATTTCCATCTCCTCCCTATTTCCGATTTCTCTTCTCTCTTTTTCTTTTTAATTCCCCCCCTCCCTCTTCTTAAATTGCACCCCGCGATTTCTTTACACTACTGACTAACACACCGCCCATCCTCTTTTCAAATTTATGTTTATCTATCACTCATCATTCATTGGGGGTTATTCTCCGATTTTTGTGTACTGTAGGACAATAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGTACCCATTACTCAAATCCCCCCCACCCTATTTCTTTCTTCCTCCAACAATTAGTAAAAAAGTTTTTTTTTTTTTTTTTAATTATTTTTTTTAATCTTATTTATTGGTATCCAATCAGAATAGAGGGGGAAAAAGAGAGGGGAGGGGCAAGTGGAAATACTATTGGGATATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCATTAGTCTATTGTGCGCTCATGGGCTCTGCATGTTCTTCTTCACTATAAATGGTCCACACCCTCCCCTTTCCTCTGATCACTTAGCAGTAATTAATTGCACACTTTACATATTCTTTTTGTTTTCCTTTCCTTTCCTTTTTCTATTTGCATTACATGAGTAGCTAAGCTATGGCTACCTTACAGTTGTGACTTTTTCTTTTGTGTTTGGTTTTTAGGGAAACAATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCCTCTTCTTCTTCTCAAGGTTAATACTTTCTTGTCCTTTTTAATTTTAACTTACTCTTTCGCTGTTTGGCTACCTGCTGCACTGCACCCATTTTTCATTTCTTCATTATTATTCTCATTTATTCAATTATACCTTTTCTGTTGGGTGTTTGTGTTTAATTCATGTGGAGGGGTGTAGCTAGATATCTTGTTTTGGGCTCTTCTTCTTTTTGTGTTTTGTGATTGATGGTGGAATTATATATTATTCTTGTTTAATTTGTTTATATATATATATATGTTCTTGTTTCAGTTGTGGTTGTGTTTGATGTAGTAGGTGGTGGGAGATGGTGTGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGAAGCTTTGAGAGGTCGAGTGACGAGGATAATGACGATCACAACAAAGATATTCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATCAAAACGAAGATGAATAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACATTGTTGTCGGGAAAAAGAGGTCGAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGCTGCTGCTACACCGAAGAACATCGTCGTCATTGAGAAAGACGAGAAGAAGCCATCTCCATCTCAATTCCCATCATCACCACCACCACCGTCATCGTTCTCGTTGACCAATAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCGATAAGTAGCTTGCTCGGCCAACCCGACGGCATTGTGGCAACACCGCTGTCTCTGCCCTCGACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTCTTACATAAATAACAGCCTTCCTGATCTTTCCGTAAATTTTCAGCTTCTGTCATTTCGATGGTATTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAGTTGTATTGTTTTATGTATTTGGACATTTGATCATATATATATATATTTATATGTAATGTATACTACGTTTACATTATGTGTGTGGATGAAGAAAATCAATTAAAGCAGTATTACACAGCC

mRNA sequence

CTGCTACCTCCTCTTCCGGTTTCCCCCTCCGGTGCAACTCACAATTAAAGCCATACACACACACACACACACACTCTCTCACAAAATCCCATTCCCCCAAATTCACCCCCCAAGATAAGAACACCATACCTCTTCTTACTTCTTCCCTTCTCCGATCACAATCCCCAATCCCGATATGCGAATCAGAAAACGCCAGCTCCCATTACCGGCCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCATCTCCCCTCCTCCTCCTCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACAATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCCTCTTCTTCTTCTCAAGTTGTGGTTGTGTTTGATGTAGTAGGTGGTGGGAGATGGTGTGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGAAGCTTTGAGAGGTCGAGTGACGAGGATAATGACGATCACAACAAAGATATTCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATCAAAACGAAGATGAATAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACATTGTTGTCGGGAAAAAGAGGTCGAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGCTGCTGCTACACCGAAGAACATCGTCGTCATTGAGAAAGACGAGAAGAAGCCATCTCCATCTCAATTCCCATCATCACCACCACCACCGTCATCGTTCTCGTTGACCAATAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCGATAAGTAGCTTGCTCGGCCAACCCGACGGCATTGTGGCAACACCGCTGTCTCTGCCCTCGACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTCTTACATAAATAACAGCCTTCCTGATCTTTCCGTAAATTTTCAGCTTCTGTCATTTCGATGGTATTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAGTTGTATTGTTTTATGTATTTGGACATTTGATCATATATATATATATTTATATGTAATGTATACTACGTTTACATTATGTGTGTGGATGAAGAAAATCAATTAAAGCAGTATTACACAGCC

Coding sequence (CDS)

ATGCGAATCAGAAAACGCCAGCTCCCATTACCGGCCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCATCTCCCCTCCTCCTCCTCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACAATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCCTCTTCTTCTTCTCAAGTTGTGGTTGTGTTTGATGTAGTAGGTGGTGGGAGATGGTGTGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGAAGCTTTGAGAGGTCGAGTGACGAGGATAATGACGATCACAACAAAGATATTCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATCAAAACGAAGATGAATAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACATTGTTGTCGGGAAAAAGAGGTCGAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGCTGCTGCTACACCGAAGAACATCGTCGTCATTGAGAAAGACGAGAAGAAGCCATCTCCATCTCAATTCCCATCATCACCACCACCACCGTCATCGTTCTCGTTGACCAATAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCGATAAGTAGCTTGCTCGGCCAACCCGACGGCATTGTGGCAACACCGCTGTCTCTGCCCTCGACGTTGCATGATGACAACATTGACAAGTAA

Protein sequence

MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK

Homology

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BLAST of Pay0016880 vs. ExPASy Swiss-Prot
Match: Q6AWY1 (Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.4e-04
Identity = 22/62 (35.48%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 165 GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNR--SLAAATPKN 224
           G A +E  RC R +G+ WRC +  +     CE H+ +GR RS  +V  R  +L  A P  
Sbjct: 155 GCADVEPRRCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRSRKHVEGRKATLTIAEPST 214

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BLAST of Pay0016880 vs. ExPASy TrEMBL
Match: A0A5A7TKD1 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00710 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 294

[Close]

BLAST of Pay0016880 vs. ExPASy TrEMBL
Match: A0A1S3B737 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 294

[Close]

BLAST of Pay0016880 vs. ExPASy TrEMBL
Match: A0A1S3B760 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 287/294 (97.62%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQ       VGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQ-------VGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 287

[Close]

BLAST of Pay0016880 vs. ExPASy TrEMBL
Match: A0A1S3B7U9 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.8e-153
Identity = 286/294 (97.28%), Postives = 286/294 (97.28%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQ        GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQ--------GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 286

[Close]

BLAST of Pay0016880 vs. ExPASy TrEMBL
Match: A0A0A0LGX5 (Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_3G806230 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.0e-134
Identity = 265/301 (88.04%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LP    SSDPPINPLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLP----SSDPPINPLD-NNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSS         GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSSS-------QGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120

Query: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPS---- 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPS    
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240

Query: 241 PSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 295
           PS FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 289

[Close]

BLAST of Pay0016880 vs. NCBI nr
Match: XP_008443037.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo] >KAA0043742.1 WRC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 571.6 bits (1472), Expect = 3.8e-159
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 294

[Close]

BLAST of Pay0016880 vs. NCBI nr
Match: XP_008443038.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo])

HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153
Identity = 287/294 (97.62%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQ       VGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQ-------VGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 287

[Close]

BLAST of Pay0016880 vs. NCBI nr
Match: XP_008443039.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo])

HSP 1 Score: 550.1 bits (1416), Expect = 1.2e-152
Identity = 286/294 (97.28%), Postives = 286/294 (97.28%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSSQ        GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK
Sbjct: 61  GAETINNALLPHSSSSSQ--------GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180
           DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR
Sbjct: 121 DIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGR 180

Query: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240
           GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS
Sbjct: 181 GWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPS 240

Query: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 295
           SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK
Sbjct: 241 SPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVATPLSLPSTLHDDNIDK 286

[Close]

BLAST of Pay0016880 vs. NCBI nr
Match: XP_004136730.1 (uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus] >KGN59436.2 hypothetical protein Csa_001252 [Cucumis sativus])

HSP 1 Score: 488.8 bits (1257), Expect = 3.3e-134
Identity = 266/301 (88.37%), Postives = 273/301 (90.70%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LP    SSDPPINPLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLP----SSDPPINPLD-NNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSS        VGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSS------SQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120

Query: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPS---- 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPS    
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240

Query: 241 PSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 295
           PS FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 290

[Close]

BLAST of Pay0016880 vs. NCBI nr
Match: XP_011652086.1 (uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 265/301 (88.04%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LP    SSDPPINPLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLP----SSDPPINPLD-NNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120
           GAETINNALLPHSSSSS         GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSSS-------QGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120

Query: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPS---- 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPS    
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240

Query: 241 PSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 295
           PS FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 289

[Close]

BLAST of Pay0016880 vs. TAIR 10
Match: AT2G42040.1 (CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-27
Identity = 110/314 (35.03%), Postives = 134/314 (42.68%), Query Frame = 0


Query: 1   MRIRKRQLPLPAFSSLSDP-----------------------------PVQLHLPSSSSS 60
           MRIRKRQ+PLP  S L  P                              +QL LP  S  
Sbjct: 1   MRIRKRQVPLPLSSLLPVPLSDLYFNRSPTATARYFRGGYKDGGDDFGSLQLSLPPPSQI 60

Query: 61  SD-----------PPINPLDNNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSQVV 120
           SD             +  LD++N    +  + D+      G++ +N    P   S S + 
Sbjct: 61  SDRLIQRDLIKKKEEVKALDDDNGDVDVKSRTDAS-----GSKNVN----PRGESVSSIQ 120

Query: 121 VVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDIQVATKLQDEKKMIKTKMN 180
           VV          + EK   L+KRRG       ED +D                       
Sbjct: 121 VVE---------KNEKVVSLRKRRGFINFEDYEDEED----------------------- 180

Query: 181 KKCTLSQKQSKVGLDIVVGKKRSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHH 240
                 ++ S  G  I  GKK+++  GG L EGSRCSRVNGRGWRCCQQTLVGYSLCEHH
Sbjct: 181 ------EEASGGGGRINKGKKKAKKSGGGLEEGSRCSRVNGRGWRCCQQTLVGYSLCEHH 240

Query: 241 LGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPSPSQFPSSPPPPSSFSLTNKKRMKL 273
           LGKGR+RSMN            K  VV+E                         KKR+KL
Sbjct: 241 LGKGRVRSMNKSGG---GRGGEKKAVVVE-----------------------VKKKRVKL 241

[Close]

BLAST of Pay0016880 vs. TAIR 10
Match: AT5G53660.1 (growth-regulating factor 7 )

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 169 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 211
           +E  RC R +G+ WRC ++ +  +  CE HL +GR RS  +V
Sbjct: 108 LEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHV 149

The following BLAST results are available for this feature:

BLAST of Pay0016880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWY1	7.4e-04	35.48	Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2...	[more]

BLAST of Pay0016880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKD1	1.9e-159	100.00	Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3B737	1.9e-159	100.00	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]
A0A1S3B760	1.5e-153	97.62	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]
A0A1S3B7U9	5.8e-153	97.28	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]
A0A0A0LGX5	6.0e-134	88.04	Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_3G806230 PE=3 SV=1	[more]

BLAST of Pay0016880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443037.1	3.8e-159	100.00	PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_008443038.1	3.2e-153	97.62	PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo]	[more]
XP_008443039.1	1.2e-152	97.28	PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo]	[more]
XP_004136730.1	3.3e-134	88.37	uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus] >KGN59436.2 hy...	[more]
XP_011652086.1	1.2e-133	88.04	uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus]	[more]

BLAST of Pay0016880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42040.1	3.7e-27	35.03	CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 ...	[more]
AT5G53660.1	1.5e-04	40.48	growth-regulating factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 170..210 e-value: 4.9E-15 score: 54.9
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 168..212 score: 21.18947
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR31602:SF19	OS02G0773600 PROTEIN	coord: 5..273
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 5..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016880.2	Pay0016880.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding