Pay0016844 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016844
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr06: 25056525 .. 25061002 (+)
RNA-Seq Expression	Pay0016844
Synteny	Pay0016844

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTAGGTGTTGTAGCCCAGTTAAGGAGGGAAGGCAGAGTTACTCTGTAGCCTTATATGGCATGACAATTGTTGTAACACCCCAATGATCTCATGTCGTTCATTTTTTAAATTCAATTATTTATTTTTATTTTTATCCATCTATTTGTTTATAATTAAATAATGAAACTTATGTCATCAAGATGTGAATTTTTCCCCTTTTAAAATATTAAGCAAATTTCAACTTTAATTATACTTGGTAATTAAAGATTTAATTGGTATTTGGAAGTTGAGGGAAAGGAGGAATTTGGGGGAAATATTGGTAAATTAGAGAGAGAAGAGTGAAATTTGGAATTTATTAAAGAAGAGAAAAAGAGGGGAATTTATTTTATAAAAGGAAAAGGAAAGGAAAAGAAAAGGAAAAGAAAAGGAAAAGAAAAAGGAAAAAGAAAAAGAGAAAGAAGAAGAAGAAGCCGAGAAACCCTAGCCACGCCGCCGCCGCCGAGTCGACGCACATCGTCCCAGCCGCGTCGGAGATCAGGTCAAGTCGAGCCGTCGCACGCCAGCCGTCGCCCGAAGCCGCGTTACACCCGTGCCTGCGCCGCGCCACATCGATCCGAGGGAGAGCAGCTGAAGCCGCGTCGCCGAGCCGCCCAGTCCCATCGTGCGCAACCGCCAACCACTGCGTGAAGCCGCGCACTGCCAAGTCACCGACCCGCAGCAGTCGACGGCGTCAGCCGCGCGCCTCCAGCCGTGAAGCAGAACCCGCGTTTCGGCTGATCTGCGCCCGCCCGTCGGCCCGAGTCCAAAACCGACCCGCGCCGCCCGCCGAACCCGAACTCCGCGCGCGCGCCTACTCCCAAGCCGAGCCGCGCCTCCCTGCTGACGTGAGCCGAGCCGCTCGCGCAAGCCCCTTTCGCCAGGACTGAGCCGAGCCGATTCTGTCCTTCTTCCAGCCGAGCCGCCAAGTCAATTTTGGCTCCTTCCACCTAGTTTTTGGTAAATTTCCAAATTCCCTAGCCTGCCCAGTAATTAAATGAGTTAATTTGGAAATTTAATTAATTTAATTCCTCAAGAAGCAACTTGGACCAAATAGCTGCTGCAGCTTAGGACTTCCTCAGTAGGAACTCATCTAGCAACATCTCGAGGTAAGAGATTTCTACTACTAGACCCATGAACAAATTGTAAGATTTCGCATGCTGTGAGATATGCATACTGATGATTGACCGTATGGTGTATTGAACTGTTGACTGTATGACGATGTTATGATATTAATGCTCAGTAGTATGTGGCCGTATGTTGTGTTGAACTGCTGACTGTAGGAGGACGTTGTGATACGAATGCTCGGTAGCATATGACCGAAATGTTTGGAATTGTTCTGACGATGTAGAGACTGTTGAGGAAGGGAAGGGAGCTAGTGTTCACTATTTCGTCATAGTTGTATGATGATGAGATGTATATGTATGTTAAGACTAGGGTCCCTGTTAGCAACCCAGTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTGAGGACTGTGTGGTCCGACGGGACGCCAGTCTAGCATGATATAGACATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCGGGCACCGAAGACCAGAGTTTCGTTCCTACGGGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTTTCAGGACTCGATAGGGAAGCCAACAGGCACCTAGTGGGACTAGTAGTGGGTCCCTTACTGAGTATTTTTATACTCATTCTCTTCATTTTATGTTTTCAGGTAGAGGACGAGGTAAGGGCAAAGGCAAGCTGGCGAGCGACGTGAAGTGACCGTGGCGAGCCATAGGGGTTTTCCTGCTTCCGCACATGTTTTACTTTACAGTTAAATTCATGTTTCGGCTTTCTGCATATTTACTTTGGTTATTTTTGTAGATAGGGCCCGCTTAGGGATTTTAAACTTAACTCGTATTTCTACATGTTACCTTAACTATCTTTCATAAATACATTTGCTAGATTTCTTTGCATTTATTTACACCAGATTTTATGACTTAAACACTGATCCTAGATTCAGTAACCACTTCGATTCAGCATAAAGAGTCGGGTCGTTACAGTTGGTATCAGAGCGCAGTGTTTTAGGTCCTGTAGACTGACTTATGATGTAAGTCATTTTGTTTTGATTTTTACCTCACCCTATGGCTATACGGTCCTTCGTCACTCGCCAGGTATGCCTAAAGCTTTACAAATATTAAGATTATAATGTTGCCTGATTAGATTAGACTTAGAGTGAGAATATTGAGCTCTAGTGGTGAAAAATTTGTTGGTGAATTTTAGGAAGAATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGCAGGGGAGGCAGAGGAGCCGGTCGTGGCCAACCGGCGGAGCAACCTGCCGCGCCGCCAGTCAACCCCGACGTACCAGTCAACCCTAATGCACCGGTCACTCAGGCGGATCTCGCCGCAATGGAGCAGCGTTACCAGGCCATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCAAGCACTTGAGGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTGTGGTTGACATCCATAGAGACGATCTTCAGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGCTTTCTGTTTGGAGGATAGGGGGACTGCCTGGTGGGAGACTGCTGAGAGGGCGCTGGGAGGAGATGCCAGCAAGATCACATGGGAGCAATTCAGGGAGAGCTTTTATGCTAAGTTCTTCTCTGCCAACGTGAAGCACGCCAAGCTCCAAGAATTCCTAAACTTGGAGCAAGGCAAACTGAGCGTGGAACAGTATGATGCCGAGTTCGACCTGTTGTCCCGTTTTGCCCCTGATGTGGTAAGGGATGAGGCCGCCAGGACTGAGAGATTTGTTAATGGCCTCAGGTTAGACCTCCAGGGTTTTGTACGAGCTCTTCGACCAACCACTCATGCGGATGCTCTACGCATAGCACTGGATCTGAGCCTGCATGAGAGAGCTGGTCAATCTAAGGTTGTCGGCACAGGGTCAGCCTCGGGACAGAAGAGGAAGGCGGAGGCGCAGCCCGACGTAATACCACAGCGGACTCCGAGGTCAGGAGGTGTCTTCCAGAGACACCGTCGGGAGCTGGCAGCAGCTGGGAGAACTTTGAGAGAGCTACCCACTTGTACTACCTGTGGGAAGGTCCATGGAGGACAATGTTTAGCTGGGAGTGGAGTCTGCTTCAGGTGCAGGCAGCCGGGGCACACTGCTGATGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCAGCCTTCTGCTCCCCAGCAGGGGAGAGTCTTTGCCACGAACCGGCAGGAGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATTATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGCCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGGATGTAACCTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCCACTAACCATGCAACCATAGACTGTTTCAATAAGGAAGTAGTCTTTAACCCTCCTTCAGGGGATAAGTTTAAATTTAGAGGAGCAGGCATGGTAGGTATACCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCAAGCGTAGTAGATGTGGCAGAACCAGAAGTTTTCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCTAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAATTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCGTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAGTTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTACCCAGGATTGAGGACTTGTTTGACCAGTTACAGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGA

mRNA sequence

ATGGATTTTAGGTGTTGTAGCCCAGTTAAGGAGGGAAGGCAGAGAAAGGAAAAGAAAAGGAAAAGAAAAGGAAAAGAAAAAGGAAAAAGAAAAAGAGAAAGAAGAAGAAGAAGCCGAGAAACCCTAGCCACGCCGCCGCCGCCGAGTCGACGCACATCGTCCCAGCCGCGTCGGAGATCAGGTCAAGTCGAGCCGTCGCACGCCAGCCGTCGCCCGAAGCCGCGTTACACCCGTGCCTGCGCCGCGCCACATCGATCCGAGGGAGAGCAGCTGAAGCCGCGTCGCCGAGCCGCCCAGTCCCATCGTGCGCAACCGCCAACCACTGCAATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGCAGGGGAGGCAGAGGAGCCGGTCGTGGCCAACCGGCGGAGCAACCTGCCGCGCCGCCAGTCAACCCCGACGTACCAGTCAACCCTAATGCACCGGTCACTCAGGCGGATCTCGCCGCAATGGAGCAGCGTTACCAGGCCATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCAAGCACTTGAGGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTGTGGTTGACATCCATAGAGACGATCTTCAGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGCTTTCTGTTTGGAGGATAGGGGGACTGCCTGGTGGGAGACTGCTGAGAGGGCGCTGGGAGGAGATGCCAGCAAGATCACATGGGAGCAATTCAGGGAGAGCTTTTATGCTAAGTTCTTCTCTGCCAACGTGAAGCACGCCAAGCTCCAAGAATTCCTAAACTTGGAGCAAGGCAAACTGAGCGTGGAACAGTATGATGCCGAGTTCGACCTGTTGTCCCGTTTTGCCCCTGATGTGGTAAGGGATGAGGCCGCCAGGACTGAGAGATTTGTTAATGGCCTCAGGTTAGACCTCCAGGGTTTTGTACGAGCTCTTCGACCAACCACTCATGCGGATGCTCTACGCATAGCACTGGATCTGAGCCTGCATGAGAGAGCTGGTCAATCTAAGGTTGTCGGCACAGGGTCAGCCTCGGGACAGAAGAGGAAGGCGGAGGCGCAGCCCGACGTAATACCACAGCGGACTCCGAGGTCAGGAGGTGTCTTCCAGAGACACCGTCGGGAGCTGGCAGCAGCTGGGAGAACTTTGAGAGAGCTACCCACTTGTACTACCTGTGGGAAGGTCCATGGAGGACAATGTTTAGCTGGGAGTGGAGTCTGCTTCAGGTGCAGGCAGCCGGGGCACACTGCTGATGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCAGCCTTCTGCTCCCCAGCAGGGGAGAGTCTTTGCCACGAACCGGCAGGAGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATTATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGCCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGGATGTAACCTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCCACTAACCATGCAACCATAGACTGTTTCAATAAGGAAGTAGTCTTTAACCCTCCTTCAGGGGATAAGTTTAAATTTAGAGGAGCAGGCATGGTAGGTATACCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCAAGCGTAGTAGATGTGGCAGAACCAGAAGTTTTCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCTAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAATTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCGTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAGTTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTACCCAGGATTGAGGACTTGTTTGACCAGTTACAGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGA

Coding sequence (CDS)

ATGGATTTTAGGTGTTGTAGCCCAGTTAAGGAGGGAAGGCAGAGAAAGGAAAAGAAAAGGAAAAGAAAAGGAAAAGAAAAAGGAAAAAGAAAAAGAGAAAGAAGAAGAAGAAGCCGAGAAACCCTAGCCACGCCGCCGCCGCCGAGTCGACGCACATCGTCCCAGCCGCGTCGGAGATCAGGTCAAGTCGAGCCGTCGCACGCCAGCCGTCGCCCGAAGCCGCGTTACACCCGTGCCTGCGCCGCGCCACATCGATCCGAGGGAGAGCAGCTGAAGCCGCGTCGCCGAGCCGCCCAGTCCCATCGTGCGCAACCGCCAACCACTGCAATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGCAGGGGAGGCAGAGGAGCCGGTCGTGGCCAACCGGCGGAGCAACCTGCCGCGCCGCCAGTCAACCCCGACGTACCAGTCAACCCTAATGCACCGGTCACTCAGGCGGATCTCGCCGCAATGGAGCAGCGTTACCAGGCCATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCAAGCACTTGAGGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTGTGGTTGACATCCATAGAGACGATCTTCAGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGCTTTCTGTTTGGAGGATAGGGGGACTGCCTGGTGGGAGACTGCTGAGAGGGCGCTGGGAGGAGATGCCAGCAAGATCACATGGGAGCAATTCAGGGAGAGCTTTTATGCTAAGTTCTTCTCTGCCAACGTGAAGCACGCCAAGCTCCAAGAATTCCTAAACTTGGAGCAAGGCAAACTGAGCGTGGAACAGTATGATGCCGAGTTCGACCTGTTGTCCCGTTTTGCCCCTGATGTGGTAAGGGATGAGGCCGCCAGGACTGAGAGATTTGTTAATGGCCTCAGGTTAGACCTCCAGGGTTTTGTACGAGCTCTTCGACCAACCACTCATGCGGATGCTCTACGCATAGCACTGGATCTGAGCCTGCATGAGAGAGCTGGTCAATCTAAGGTTGTCGGCACAGGGTCAGCCTCGGGACAGAAGAGGAAGGCGGAGGCGCAGCCCGACGTAATACCACAGCGGACTCCGAGGTCAGGAGGTGTCTTCCAGAGACACCGTCGGGAGCTGGCAGCAGCTGGGAGAACTTTGAGAGAGCTACCCACTTGTACTACCTGTGGGAAGGTCCATGGAGGACAATGTTTAGCTGGGAGTGGAGTCTGCTTCAGGTGCAGGCAGCCGGGGCACACTGCTGATGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCAGCCTTCTGCTCCCCAGCAGGGGAGAGTCTTTGCCACGAACCGGCAGGAGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATTATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGCCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGGATGTAACCTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCCACTAACCATGCAACCATAGACTGTTTCAATAAGGAAGTAGTCTTTAACCCTCCTTCAGGGGATAAGTTTAAATTTAGAGGAGCAGGCATGGTAGGTATACCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCAAGCGTAGTAGATGTGGCAGAACCAGAAGTTTTCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCTAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAATTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCGTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAGTTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTACCCAGGATTGAGGACTTGTTTGACCAGTTACAGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGA

Protein sequence

MDFRCCSPVKEGRQRKEKKRKRKGKEKGKRKRERRRRSRETLATPPPPSRRTSSQPRRRSGQVEPSHASRRPKPRYTRACAAPHRSEGEQLKPRRRAAQSHRAQPPTTAMPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAMLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIANHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPRSTCDQAITS

Homology

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BLAST of Pay0016844 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-16
Identity = 53/159 (33.33%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 653 KASKLLSQGTWGILASVVDVAEPEVFLSSEP---------VVREYPDVFPDELPGLPPPR 712
           +AS L   G +  + S +   EP     S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 713 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 772
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 773 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL 798
            V KKDG+ RLC+DYR LNK T+ + +PLPRI++L  ++
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRI 676

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BLAST of Pay0016844 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-16
Identity = 53/159 (33.33%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 653 KASKLLSQGTWGILASVVDVAEPEVFLSSEP---------VVREYPDVFPDELPGLPPPR 712
           +AS L   G +  + S +   EP     S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 713 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 772
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 773 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL 798
            V KKDG+ RLC+DYR LNK T+ + +PLPRI++L  ++
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRI 702

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BLAST of Pay0016844 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-12
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 686 REYPDVFPDELPGLPPPREVDFAIELEPGTA--------------PISRAPYRMAPAELK 745
           + +P++F  +L  +       FA+E EP T               P+    YR   ++++
Sbjct: 269 KNFPELFKSQLENICSEYIDIFALESEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVE 328

Query: 746 ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG------SMRLCIDYRELNKVTVKNRY 798
           E++ Q+Q+L+    + PSVS + +P+L V KK          RL IDYR++NK  + +++
Sbjct: 329 EIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKF 388

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BLAST of Pay0016844 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-11
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 672 VAEPEVFLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 731
           V EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 732 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 791
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 792 IEDLFDQLQGPPSFPR 806
           IE L  ++QG   F +
Sbjct: 489 IEQLLAKIQGSTIFTK 500

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BLAST of Pay0016844 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-11
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 672 VAEPEVFLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 731
           V EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 732 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 791
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 792 IEDLFDQLQGPPSFPR 806
           IE L  ++QG   F +
Sbjct: 489 IEQLLAKIQGSTIFTK 500

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BLAST of Pay0016844 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 686/696 (98.56%), Postives = 690/696 (99.14%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFR 229
           QAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFR
Sbjct: 61  QAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFR 120

Query: 230 KYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERA 289
           KYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERA
Sbjct: 121 KYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERA 180

Query: 290 LGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPD 349
           LGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPD
Sbjct: 181 LGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPD 240

Query: 350 VVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSAS 409
           VVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSAS
Sbjct: 241 VVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSAS 300

Query: 410 GQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSG 469
           GQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSG
Sbjct: 301 GQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSG 360

Query: 470 VCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHY 529
           VCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHY
Sbjct: 361 VCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHY 420

Query: 530 ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIANHT 589
           ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGE LLSKEKIRACWVEIANHT
Sbjct: 421 ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHT 480

Query: 590 LDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI 649
           L+VTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI
Sbjct: 481 LNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI 540

Query: 650 SAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVDFAI 709
           SAMKASKLLSQGTWGILA+VVD+AEPEV LSSEPVVREYPDVFPDELPGLPPPREVDFAI
Sbjct: 541 SAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAI 600

Query: 710 ELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL 769
           ELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
Sbjct: 601 ELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL 660

Query: 770 CIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           CIDYRELNKVTVKNRYPLPRIEDLFDQLQG   F +
Sbjct: 661 CIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSK 696

[Close]

BLAST of Pay0016844 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 607/699 (86.84%), Postives = 629/699 (89.99%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
           QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLSAEAKHLR
Sbjct: 61  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLR 120

Query: 230 DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
           DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 180

Query: 290 ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
           ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 181 ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 240

Query: 350 APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
           APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 241 APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 300

Query: 410 SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
           SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 301 SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 360

Query: 470 GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
           GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 361 GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 420

Query: 530 GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
           GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 421 GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 480

Query: 590 NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
           N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 481 NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 540

Query: 650 KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
           KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 541 KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 600

Query: 710 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
           FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 601 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 660

Query: 770 MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 661 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 693

[Close]

BLAST of Pay0016844 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 606/699 (86.70%), Postives = 628/699 (89.84%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
           QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLS EAKHLR
Sbjct: 61  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLR 120

Query: 230 DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
           DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 180

Query: 290 ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
           ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 181 ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 240

Query: 350 APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
           APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 241 APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 300

Query: 410 SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
           SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 301 SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 360

Query: 470 GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
           GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 361 GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 420

Query: 530 GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
           GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 421 GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 480

Query: 590 NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
           N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 481 NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 540

Query: 650 KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
           KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 541 KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 600

Query: 710 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
           FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 601 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 660

Query: 770 MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 661 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 693

[Close]

BLAST of Pay0016844 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 607/699 (86.84%), Postives = 628/699 (89.84%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
           QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLSAEAKHLR
Sbjct: 61  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLR 120

Query: 230 DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
           DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 180

Query: 290 ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
           ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 181 ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 240

Query: 350 APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
           APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 241 APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 300

Query: 410 SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
           SA GQKRK E QPDV PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 301 SALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 360

Query: 470 GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
           GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 361 GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 420

Query: 530 GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
           GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 421 GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 480

Query: 590 NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
           N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 481 NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 540

Query: 650 KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
           KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 541 KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 600

Query: 710 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
           FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 601 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 660

Query: 770 MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 661 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 693

[Close]

BLAST of Pay0016844 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 606/699 (86.70%), Postives = 628/699 (89.84%), Query Frame = 0


Query: 110  MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
            MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 352  MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 411

Query: 170  QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
            QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLS EAKHLR
Sbjct: 412  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLR 471

Query: 230  DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
            DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 472  DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 531

Query: 290  ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
            ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 532  ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 591

Query: 350  APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
            APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 592  APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 651

Query: 410  SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
            SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 652  SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 711

Query: 470  GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
            GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 712  GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 771

Query: 530  GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
            GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 772  GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 831

Query: 590  NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
            N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 832  NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 891

Query: 650  KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
            KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 892  KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 951

Query: 710  FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
            FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 952  FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 1011

Query: 770  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 1012 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 1044

[Close]

BLAST of Pay0016844 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 686/696 (98.56%), Postives = 690/696 (99.14%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFR 229
           QAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFR
Sbjct: 61  QAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLRDFR 120

Query: 230 KYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERA 289
           KYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERA
Sbjct: 121 KYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETAERA 180

Query: 290 LGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPD 349
           LGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPD
Sbjct: 181 LGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRFAPD 240

Query: 350 VVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSAS 409
           VVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSAS
Sbjct: 241 VVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTGSAS 300

Query: 410 GQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSG 469
           GQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSG
Sbjct: 301 GQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLAGSG 360

Query: 470 VCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHY 529
           VCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHY
Sbjct: 361 VCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPILGHY 420

Query: 530 ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIANHT 589
           ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGE LLSKEKIRACWVEIANHT
Sbjct: 421 ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHT 480

Query: 590 LDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI 649
           L+VTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI
Sbjct: 481 LNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI 540

Query: 650 SAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVDFAI 709
           SAMKASKLLSQGTWGILA+VVD+AEPEV LSSEPVVREYPDVFPDELPGLPPPREVDFAI
Sbjct: 541 SAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAI 600

Query: 710 ELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL 769
           ELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
Sbjct: 601 ELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL 660

Query: 770 CIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           CIDYRELNKVTVKNRYPLPRIEDLFDQLQG   F +
Sbjct: 661 CIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSK 696

[Close]

BLAST of Pay0016844 vs. NCBI nr
Match: TYJ95850.1 (pol protein [Cucumis melo var. makuwa] >TYJ99649.1 pol protein [Cucumis melo var. makuwa] >TYK03350.1 pol protein [Cucumis melo var. makuwa] >TYK07425.1 pol protein [Cucumis melo var. makuwa] >TYK08707.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 607/699 (86.84%), Postives = 629/699 (89.99%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
           QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLSAEAKHLR
Sbjct: 61  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLR 120

Query: 230 DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
           DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 180

Query: 290 ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
           ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 181 ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 240

Query: 350 APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
           APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 241 APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 300

Query: 410 SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
           SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 301 SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 360

Query: 470 GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
           GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 361 GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 420

Query: 530 GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
           GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 421 GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 480

Query: 590 NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
           N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 481 NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 540

Query: 650 KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
           KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 541 KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 600

Query: 710 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
           FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 601 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 660

Query: 770 MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 661 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 693

[Close]

BLAST of Pay0016844 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 606/699 (86.70%), Postives = 628/699 (89.84%), Query Frame = 0


Query: 110 MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
           MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 60

Query: 170 QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
           QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLS EAKHLR
Sbjct: 61  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLR 120

Query: 230 DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
           DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 180

Query: 290 ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
           ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 181 ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 240

Query: 350 APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
           APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 241 APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 300

Query: 410 SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
           SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 301 SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 360

Query: 470 GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
           GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 361 GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 420

Query: 530 GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
           GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 421 GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 480

Query: 590 NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
           N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 481 NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 540

Query: 650 KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
           KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 541 KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 600

Query: 710 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
           FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 601 FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 660

Query: 770 MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
           MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 661 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 693

[Close]

BLAST of Pay0016844 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 606/699 (86.70%), Postives = 628/699 (89.84%), Query Frame = 0


Query: 110  MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
            MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 352  MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 411

Query: 170  QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
            QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLS EAKHLR
Sbjct: 412  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLR 471

Query: 230  DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
            DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 472  DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 531

Query: 290  ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
            ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 532  ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 591

Query: 350  APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
            APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 592  APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 651

Query: 410  SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
            SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 652  SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 711

Query: 470  GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
            GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 712  GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 771

Query: 530  GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
            GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 772  GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 831

Query: 590  NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
            N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 832  NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 891

Query: 650  KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
            KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 892  KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 951

Query: 710  FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
            FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 952  FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 1011

Query: 770  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 1012 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 1044

[Close]

BLAST of Pay0016844 vs. NCBI nr
Match: TYK28368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 606/699 (86.70%), Postives = 628/699 (89.84%), Query Frame = 0


Query: 110  MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 169
            MPPRRG RRGGGRGGRGAGRG    QP APPV P   V+PNAPVTQADLAAMEQRYQ ML
Sbjct: 340  MPPRRGTRRGGGRGGRGAGRG----QPEAPPVAP--AVDPNAPVTQADLAAMEQRYQDML 399

Query: 170  QAALAPFLAAQQNQAAPVQDQPV---VPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKHLR 229
            QAALAPFLAAQQNQAAPVQ +        APVQ Q V PPAP EAQPVPVQLS EAKHLR
Sbjct: 400  QAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLR 459

Query: 230  DFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWWETA 289
            DFRKYNPKTFDGS+DNP +AQ+WLTSIETIFRYMKCPEDQKVQCA F LEDRGTAWWETA
Sbjct: 460  DFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETA 519

Query: 290  ERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLLSRF 349
            ER LGGD SKITWEQF+E+FYAKFFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+LSRF
Sbjct: 520  ERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRF 579

Query: 350  APDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVVGTG 409
            APD+VRDEAARTE+FV GLRLDLQG VRALRP THADALRIALDLSL ERA  SK  G G
Sbjct: 580  APDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRG 639

Query: 410  SASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQCLA 469
            SA GQKRK E QPDV+PQRT RSGGVFQRHRRELAAAGRTLRELP CTTCG+VHGG+CLA
Sbjct: 640  SALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLA 699

Query: 470  GSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTLPIL 529
            GSGVCFRCRQPGHTAD CPRKP ETTP QPSA QQGRVFAT RQEAERA TVVTGTLPIL
Sbjct: 700  GSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPIL 759

Query: 530  GHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEALLSKEKIRACWVEIA 589
            GHYA VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGE LLSKE+I+AC VEIA
Sbjct: 760  GHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIA 819

Query: 590  NHTLDVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIP 649
            N  LDVTLLVLDMQDFDVILGMDWLS NHA IDC+ KEVVFNPPS   FKFRGAGMV IP
Sbjct: 820  NRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIP 879

Query: 650  KVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPGLPPPREVD 709
            KVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPGLPPPREVD
Sbjct: 880  KVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVD 939

Query: 710  FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 769
            FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS
Sbjct: 940  FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS 999

Query: 770  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR 806
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQG   F +
Sbjct: 1000 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 1032

The following BLAST results are available for this feature:

BLAST of Pay0016844 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.2e-16	33.33	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.2e-16	33.33	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P10394	2.4e-12	31.82	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
Q9UR07	1.2e-11	31.62	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.2e-11	31.62	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Pay0016844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP01	0.0e+00	98.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5D3CQB5	0.0e+00	86.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7TEQ2	0.0e+00	86.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	0.0e+00	86.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3DY07	0.0e+00	86.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62...	[more]

BLAST of Pay0016844 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025917.1	0.0e+00	98.56	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
TYJ95850.1	0.0e+00	86.84	pol protein [Cucumis melo var. makuwa] >TYJ99649.1 pol protein [Cucumis melo var...	[more]
KAA0025848.1	0.0e+00	86.70	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK28422.1	0.0e+00	86.70	pol protein [Cucumis melo var. makuwa]	[more]
TYK28368.1	0.0e+00	86.70	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0016844 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 501..630 e-value: 3.1E-41 score: 140.4
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 706..784 e-value: 1.2E-36 score: 128.0
None	No IPR available	GENE3D	4.10.60.10		coord: 466..500 e-value: 2.3E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 482..501
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 514..782
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 514..782
None	No IPR available	CDD	cd01647	RT_LTR	coord: 744..809 e-value: 3.17241E-27 score: 106.911
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 548..611 e-value: 1.08851E-10 score: 56.9612
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 785..799 e-value: 1.2E-36 score: 128.0
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 271..366 e-value: 2.1E-15 score: 56.8
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 502..637 e-value: 8.3E-23 score: 82.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 522..620
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 532..543
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 471..486 score: 9.323063
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 684..799

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016844.1	Pay0016844.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding