Pay0016294 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016294
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Mediator of RNA polymerase II transcription subunit 7
Location	chr04: 30052639 .. 30056204 (-)
RNA-Seq Expression	Pay0016294
Synteny	Pay0016294

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGACTAAATTTTACATAATCTACATAGTTTACATCTTTTATAATTTTCCCTCGAACCATCATACAATTAAACAGCCGCGAACTCATCCGTCCTTGTTAGACTTTTTTCCGATCAAGACTAAACCATGGCGACGGCTACCTATCCACCGCCACCTCCATTTTACAAGCTCTACAAAGATTACTTGCAGGATCCGAAATCAGCCCCGGAGCCTCCTCCCCCCATCGAAGGCACCTATATGTGCTTCGGTAGCAATTACACAGTGAGATTTTCTCTCCATTCCTTTTGAATATCGTGATTCTGTTTTCATTTCACACACCAGTTGAGTTCTTTTAGCTGTTTGCGTTGTAGTTGCACGTTTCATCTTTAATTCCATAGAGTTGACGGGACGTATGTATGTTCAGAATGTATTTAGGGTTTTCAGCTCTGAAGTTGTTGGATTCCGCTTCCAAAATCCTTCATATTATTCTCATTTTAATGCGGTTTCCTTGTTTTATTTTATTTTATTTTTTTTATCGAATTGATAATTTGAACATTGTCATGATAATTTGAATCTCGAGAGTCAGTTTTGATTTCACACACTAGTCGAATTCTTTTAGCAGTTTGAGTTTAATTGTACTTTTCATCTTTAATTTCATACAGTTGAAGGGGGCGTATGTATGTTCAGAATGTACTTAGGGTTTTTCAGTTCTGAAGTTGTCGAATTCTGCTTTCTAAAATCCTTCATATTATTCTCATTTTAATGCGGATTTCTTGCATGTTTTGATTGAATCGATAATTTAAACATCGTCACGATAATTTCAATCTCGAGATTCGGTTTTGATTTCACACATTAGTTGAGTACTTTTAGCAGTTTGAGTTTAATTGTCCTTTTCATCTTTAATTCCATAGAGTTGGAGGGGACGCATGTTTGTGCAGAATGTATTTAGGGTTTTTCAGTTCTGAAGTTGTTGGATTACGCTTCCGAAATCCTTCATATTATTATCATTTTACTGCGGATTCCTTGTATATTTTTGATTGGATTGATTATTCAAACAGCGTCATGATAATTGCTCTGGTTTTTTCTTCTTTATCTTGATTGTTCTGTTGTGATTTTAGACAGATGACGTGCTTCCAAGTTTGGAAGAGCAAGGAGTGCGCCAACTTTACCCTAGAGGGCCAAATGTTGGTAAGTATGTTTAGTTATCAGTCTTCCAAATTGTTCTCAATCAGTGGTTTTCTATTCAATAAGAATTGTTATTTGTCTCTCAATTAAGTTAGTGTTATGCTCTAGCATTTATCTTCTGATTTTAAGGTCTGTGGTCTCTGTTTTTGTTCGTTGATAAGAAAAATGGATGGACTCATAGTCCCCAAGGGATGTTCGCATTGTTTAATAAGGCCTGTTGTCTTTGAGAAAAACTTACTCAGAGGTTTGGTCTTTGAAGCTGGCAGCCATGGGTTTTCAAAAGAATAGAATACTTGTATTGGAGGAGGAGGGATGCTGAAGTGAAGGAACAATTTGCAATCCATCCCCATGCCAAGATTTAAAGGTTGAGGCAAATTGTAGAGAAAATGTACAATTAGCACATGCTGAAATCAAATTACAGTTAAAAGAAAGTTTTGATGAAGATTACCAGCTAGAGTTGTGGACTTAGCCGTATCTAAAGTAAATTACAGAGACACACACAAGTCCGAAGACGCCTACATGTGCACGCTTACACCTGCTCATACACACCCTTTTATCTACATTTTTAATCAGCTTTACAATTGAACCTAGGACTGCAGGCAGCCTATAGTTAGTCAGTCGGTCAGTTGGGTTTTTTTATTTTTGAATAAAAAATGGTTCGATAATTTTCCAGTCTCTTAGCACCAGTGTGATGGTTTTAAGGCCTTGACGATCGGGTTGGGATTTTCAGATTTCTATTTCTGTGAGTATTTGAGTTGTTCTATTTGTGATTGTGAAGACATGTGGTACTGTATTTATGGACATGAAATGTGTTAGTGGTAATGGTTGTAATGTTCTTTATAGATCTAAATTAAAGGCTCTCTTTACCTACAACACTTGCTCACTGAACTTGAATGGACTGCTTGGAGTAACTCTCTCCTCTACGGGCCTGCTCCTTAAACTAACTCACTTAGCTAACAGTATTACTGTGGTACTTTCTCAGATTATAAGAAGGAATTGAGATCTCTGAATAGAGAACTGCAGCTTCACATTCTGGAGCTTGCCGATATTCTTGTTGAGAGGCCGTCCCAATATGCAAGGAGGGTGGAAGAAATATCCCTAATATTCAAAAACTTACACCATCTGCTTAATTCTTTGCGACCGCATCAGGTGGATACTTTTAGAAATTTAAAATTAGTGTATCCATATCGGTGAAGTCATTTCATGTTTATTGTTTATTTTTTCTTGTAGGCTAGAGCAACATTGATTCATATACTAGAACTTCAGATAGAGCGTCGTAGACAAGCTGTCGAGGATATAAAGAGGTATGCTAATATATCAGAAATACGAATGTGGAAGAATTGATAGAATGACTAACCCTTTCACCACACCTCTTTTGATACATTATGAAATATCCCGGGAAAACTTAATTGCATATACAAGTTGGGATTTTTGGTTCCTTTATCAATGATCATTGTTTCTTTTCATATTCTTGGTGGTATGAGTCTAGTTGGTGGAGATATGTAGTATTGTAAAGTTTTCAGATCATGATTCAATGTTCTAATTTCGAAGTCTCGATTTCCATTTTGAGGCACCTCTTCATTGATTATTTTGCTACTTTTTGAAACACGGTTTGGCTTCTTCAATGATGTACTTTGCCTAGGAGGAGAGAAGAAGCACAAAGACTGCTCATGGAGTCACTTGAAACTTTGGATGGACACTAGTACTACCTCTTTCATCAGTGTTGAATTCAGGAAGTACAGTTCGTGTCTATGCTGAATGTCTCAAACTCGAAATCCTCGTATTCTACTGCATCTACTGATTTCATCGGTTCGGTTCAGTCAGTTCTAATGCATACACTGGCGCATCAATGACATGTCTAGGTAATTCTTAGGTATAACATCTTTGTCAATCTGTGCAAGATCCAGAAGCGACCACTCCCCCATTGTGATTACTTGAACATATTGTTAATGTGCAGATTGTAATTAATTGTTTGAACTACTTTGTAAGCTATAGTTCACCGGTTCGGCATAGGGACTACGAAACGCCGTTGAAAAGATCTGTTCTATATATTGTACGGAGTGACAGCCTATAACCTTGAGATTGGAAGAAATTAATGCTATTGCGTCCTTGGCTTCGGTAATGTTTCTCTCACTATGCATTATTGTTTGAAATACAACGTTCCGCCAGGCTGTGGGATGCAGCAATAACGATGGAGACAATGGTAACTTATCAATGAATAATTTGTTTGGTCAATTATTGATGCTTTTTCATATATTTGTGTATATGTATGTATAATATTTCTTTAGTATGTCCATTACTTTCAAGCTTTGCTCATTGTTGGCCCGTTATTGGCTTGTCATTTTGGAGATGGAGATTGAGGTGTAATGGGTTTTGGTCTGCCACGTATTTAACATGAGAGA

mRNA sequence

ATAGACTAAATTTTACATAATCTACATAGTTTACATCTTTTATAATTTTCCCTCGAACCATCATACAATTAAACAGCCGCGAACTCATCCGTCCTTGTTAGACTTTTTTCCGATCAAGACTAAACCATGGCGACGGCTACCTATCCACCGCCACCTCCATTTTACAAGCTCTACAAAGATTACTTGCAGGATCCGAAATCAGCCCCGGAGCCTCCTCCCCCCATCGAAGGCACCTATATGTGCTTCGGTAGCAATTACACAACAGATGACGTGCTTCCAAGTTTGGAAGAGCAAGGAGTGCGCCAACTTTACCCTAGAGGGCCAAATGTTGATTATAAGAAGGAATTGAGATCTCTGAATAGAGAACTGCAGCTTCACATTCTGGAGCTTGCCGATATTCTTGTTGAGAGGCCGTCCCAATATGCAAGGAGGGTGGAAGAAATATCCCTAATATTCAAAAACTTACACCATCTGCTTAATTCTTTGCGACCGCATCAGGCTAGAGCAACATTGATTCATATACTAGAACTTCAGATAGAGCGTCGTAGACAAGCTGTCGAGGATATAAAGAGGAGGAGAGAAGAAGCACAAAGACTGCTCATGGAGTCACTTGAAACTTTGGATGGACACTAGTACTACCTCTTTCATCAGTGTTGAATTCAGGAAGTACAGTTCGTGTCTATGCTGAATGTCTCAAACTCGAAATCCTCGTATTCTACTGCATCTACTGATTTCATCGGTTCGGTTCAGTCAGTTCTAATGCATACACTGGCGCATCAATGACATGTCTAGGTAATTCTTAGGTATAACATCTTTGTCAATCTGTGCAAGATCCAGAAGCGACCACTCCCCCATTGTGATTACTTGAACATATTGTTAATGTGCAGATTGTAATTAATTGTTTGAACTACTTTGTAAGCTATAGTTCACCGGTTCGGCATAGGGACTACGAAACGCCGTTGAAAAGATCTGTTCTATATATTGTACGGAGTGACAGCCTATAACCTTGAGATTGGAAGAAATTAATGCTATTGCGTCCTTGGCTTCGGTAATGTTTCTCTCACTATGCATTATTGTTTGAAATACAACGTTCCGCCAGGCTGTGGGATGCAGCAATAACGATGGAGACAATGGTAACTTATCAATGAATAATTTGTTTGGTCAATTATTGATGCTTTTTCATATATTTGTGTATATGTATGTATAATATTTCTTTAGTATGTCCATTACTTTCAAGCTTTGCTCATTGTTGGCCCGTTATTGGCTTGTCATTTTGGAGATGGAGATTGAGGTGTAATGGGTTTTGGTCTGCCACGTATTTAACATGAGAGA

Coding sequence (CDS)

ATGGCGACGGCTACCTATCCACCGCCACCTCCATTTTACAAGCTCTACAAAGATTACTTGCAGGATCCGAAATCAGCCCCGGAGCCTCCTCCCCCCATCGAAGGCACCTATATGTGCTTCGGTAGCAATTACACAACAGATGACGTGCTTCCAAGTTTGGAAGAGCAAGGAGTGCGCCAACTTTACCCTAGAGGGCCAAATGTTGATTATAAGAAGGAATTGAGATCTCTGAATAGAGAACTGCAGCTTCACATTCTGGAGCTTGCCGATATTCTTGTTGAGAGGCCGTCCCAATATGCAAGGAGGGTGGAAGAAATATCCCTAATATTCAAAAACTTACACCATCTGCTTAATTCTTTGCGACCGCATCAGGCTAGAGCAACATTGATTCATATACTAGAACTTCAGATAGAGCGTCGTAGACAAGCTGTCGAGGATATAAAGAGGAGGAGAGAAGAAGCACAAAGACTGCTCATGGAGTCACTTGAAACTTTGGATGGACACTAG

Protein sequence

MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQLYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH

Homology

[Close]

BLAST of Pay0016294 vs. ExPASy Swiss-Prot
Match: Q9LYW3 (Mediator of RNA polymerase II transcription subunit 7a OS=Arabidopsis thaliana OX=3702 GN=MED7A PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.6e-75
Identity = 137/167 (82.04%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKDY ++P SAPEPPPPIEGTY+CFG NYTT+DVLPSLEEQGV Q
Sbjct: 1   MATATYPPPPPYYRLYKDYSENPNSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYP+  N+DYK ELRSLNRELQLHILELAD+LV+RPSQYA+R+ EIS IFKNLHHLLNSL
Sbjct: 61  LYPKDSNLDYKNELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 168
           RPHQARATLIHI+ELQI++R+QAVEDIKRRREEAQRLL ++  TLDG
Sbjct: 121 RPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAYLTLDG 167

[Close]

BLAST of Pay0016294 vs. ExPASy Swiss-Prot
Match: Q9LZD7 (Mediator of RNA polymerase II transcription subunit 7b OS=Arabidopsis thaliana OX=3702 GN=MED7B PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-73
Identity = 135/167 (80.84%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKD+ ++  SAPEPPPPIEGTY+CFG NYTT+DVLPSLEEQGV Q
Sbjct: 1   MATATYPPPPPYYRLYKDFSENTDSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYP+  N+DYKKELRSLNRELQLHILELAD+LV+RPSQYA+R+ EIS IFKNLHHLLNSL
Sbjct: 61  LYPKDSNLDYKKELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 168
           RPHQARATLIHI+ELQI++R+QAVEDIKRRREEAQ LL ++  TLDG
Sbjct: 121 RPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDG 167

[Close]

BLAST of Pay0016294 vs. ExPASy Swiss-Prot
Match: Q55DQ5 (Putative mediator of RNA polymerase II transcription subunit 7 OS=Dictyostelium discoideum OX=44689 GN=med7 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.3e-28
Identity = 63/141 (44.68%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 26  APEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQLYPRGPNVDYKKELRSLNRELQLHI 85
           AP  PP +   Y+ FG  Y+T D+LPSL+E G +QLYP+G +++   EL+ LNR +  + 
Sbjct: 143 APPLPPKVGANYVQFGQTYSTVDMLPSLDESGAKQLYPKG-DIEPISELKKLNRSILFNY 202

Query: 86  LELADILVERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIERRRQAVE 145
           L+L + L+E P  Y  ++E+ISL+F N HHLLNS RPHQAR TL+ I+  QI+++ Q+ E
Sbjct: 203 LQLLETLIENPKNYQSKIEDISLLFINFHHLLNSYRPHQARETLLSIMNEQIKQKNQSNE 262

Query: 146 DIKRRREEAQRLLMESLETLD 167
            IK+  +  +  LM S + L+
Sbjct: 263 SIKKALDICKESLMNSFKNLN 282

[Close]

BLAST of Pay0016294 vs. ExPASy Swiss-Prot
Match: Q17MI0 (Mediator of RNA polymerase II transcription subunit 7 OS=Aedes aegypti OX=7159 GN=MED7 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-26
Identity = 64/161 (39.75%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 8   PPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDD-VLPSLEEQGVRQLYPRGP 67
           PP  +YKLY D       AP+PP PI+GTY  FG  ++T+D ++  LE QG ++LYP+  
Sbjct: 15  PPAQYYKLYTDENVRNNRAPKPPAPIQGTYQMFGQQFSTEDNIIRPLEAQGFKRLYPQ-- 74

Query: 68  NVDYKKELRSLNRELQLHILELADILVERPS--QYARRVEEISLIFKNLHHLLNSLRPHQ 127
           + D +KEL+ LN  L ++ L+L D+LV  P   Q A ++E+++L+F ++HHLLN  RPHQ
Sbjct: 75  HFDRRKELKKLNHSLLVNFLDLIDLLVHNPDSPQRAEKIEDLNLLFVHIHHLLNEFRPHQ 134

Query: 128 ARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETL 166
           AR TL  ++ELQ  +R++  +  +   E+ + ++  +  +L
Sbjct: 135 ARETLRVMMELQKRQRQETTQRFQNHLEKVREMVNNAFASL 173

[Close]

BLAST of Pay0016294 vs. ExPASy Swiss-Prot
Match: Q3T123 (Mediator of RNA polymerase II transcription subunit 7 OS=Bos taurus OX=9913 GN=MED7 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.8e-24
Identity = 63/166 (37.95%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 3   TATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDD-VLPSLEEQGVRQL 62
           +A  PPP  + K Y D       AP+PPPPI+ +YM FG+ +  DD ++  LE QG+ +L
Sbjct: 8   SALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLESQGIERL 67

Query: 63  YPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYAR--RVEEISLIFKNLHHLLNS 122
           +P     D+KKELR LN  + ++ L+L DIL+  P    R  ++E++ L+F ++HHL+N 
Sbjct: 68  HPM--QFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINE 127

Query: 123 LRPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETL 166
            RPHQAR TL  ++E+Q  +R +  E  ++  E    ++   L +L
Sbjct: 128 YRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASL 171

[Close]

BLAST of Pay0016294 vs. ExPASy TrEMBL
Match: A0A5A7TKB8 (Mediator of RNA polymerase II transcription subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005090 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. ExPASy TrEMBL
Match: A0A0A0LBQ7 (Mediator of RNA polymerase II transcription subunit 7 OS=Cucumis sativus OX=3659 GN=Csa_3G791540 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. ExPASy TrEMBL
Match: A0A1S3B7S4 (Mediator of RNA polymerase II transcription subunit 7 OS=Cucumis melo OX=3656 GN=LOC103486732 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. ExPASy TrEMBL
Match: A0A6J1DBY3 (Mediator of RNA polymerase II transcription subunit 7 OS=Momordica charantia OX=3673 GN=LOC111019312 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 162/168 (96.43%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFY+LYKDYLQ+PKSAPEPPPPIEGTY CFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYACFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVD+KKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQI+RRRQAVEDIKRRREEAQRL MESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIDRRRQAVEDIKRRREEAQRLFMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. ExPASy TrEMBL
Match: A0A6J1FG49 (Mediator of RNA polymerase II transcription subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443847 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 162/168 (96.43%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKDY Q+PKSAPEPPPPIEGTY+CFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYSQNPKSAPEPPPPIEGTYVCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVD+KKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. NCBI nr
Match: XP_008443001.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 7a-like [Cucumis melo] >KAA0043764.1 mediator of RNA polymerase II transcription subunit 7a [Cucumis melo var. makuwa] >TYK25369.1 mediator of RNA polymerase II transcription subunit 7a [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. NCBI nr
Match: XP_031737683.1 (LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 7a-like [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 5.0e-87
Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVDY++ELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYQEELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. NCBI nr
Match: XP_004136548.2 (mediator of RNA polymerase II transcription subunit 7a [Cucumis sativus] >KAE8645773.1 hypothetical protein Csa_017289 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 7.2e-86
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATY PPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATY-PPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 167

[Close]

BLAST of Pay0016294 vs. NCBI nr
Match: XP_022937468.1 (mediator of RNA polymerase II transcription subunit 7a [Cucurbita moschata] >KAG6596657.1 Mediator of RNA polymerase II transcription subunit 7b, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028195.1 Mediator of RNA polymerase II transcription subunit 7b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 4.7e-85
Identity = 162/168 (96.43%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKDY Q+PKSAPEPPPPIEGTY+CFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYSQNPKSAPEPPPPIEGTYVCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVD+KKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. NCBI nr
Match: XP_022151348.1 (mediator of RNA polymerase II transcription subunit 7a-like [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 4.7e-85
Identity = 162/168 (96.43%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPPFY+LYKDYLQ+PKSAPEPPPPIEGTY CFGSNYTTDDVLPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYACFGSNYTTDDVLPSLEEQGVRQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYPRGPNVD+KKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDGH 169
           RPHQARATLIHILELQI+RRRQAVEDIKRRREEAQRL MESLETLDGH
Sbjct: 121 RPHQARATLIHILELQIDRRRQAVEDIKRRREEAQRLFMESLETLDGH 168

[Close]

BLAST of Pay0016294 vs. TAIR 10
Match: AT5G03220.1 (Mediator complex, subunit Med7 )

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-76
Identity = 137/167 (82.04%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKDY ++P SAPEPPPPIEGTY+CFG NYTT+DVLPSLEEQGV Q
Sbjct: 1   MATATYPPPPPYYRLYKDYSENPNSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYP+  N+DYK ELRSLNRELQLHILELAD+LV+RPSQYA+R+ EIS IFKNLHHLLNSL
Sbjct: 61  LYPKDSNLDYKNELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 168
           RPHQARATLIHI+ELQI++R+QAVEDIKRRREEAQRLL ++  TLDG
Sbjct: 121 RPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAYLTLDG 167

[Close]

BLAST of Pay0016294 vs. TAIR 10
Match: AT5G03500.1 (Mediator complex, subunit Med7 )

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-74
Identity = 135/167 (80.84%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKD+ ++  SAPEPPPPIEGTY+CFG NYTT+DVLPSLEEQGV Q
Sbjct: 1   MATATYPPPPPYYRLYKDFSENTDSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYP+  N+DYKKELRSLNRELQLHILELAD+LV+RPSQYA+R+ EIS IFKNLHHLLNSL
Sbjct: 61  LYPKDSNLDYKKELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 168
           RPHQARATLIHI+ELQI++R+QAVEDIKRRREEAQ LL ++  TLDG
Sbjct: 121 RPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDG 167

[Close]

BLAST of Pay0016294 vs. TAIR 10
Match: AT5G03500.2 (Mediator complex, subunit Med7 )

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-74
Identity = 135/167 (80.84%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKD+ ++  SAPEPPPPIEGTY+CFG NYTT+DVLPSLEEQGV Q
Sbjct: 1   MATATYPPPPPYYRLYKDFSENTDSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYP+  N+DYKKELRSLNRELQLHILELAD+LV+RPSQYA+R+ EIS IFKNLHHLLNSL
Sbjct: 61  LYPKDSNLDYKKELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 168
           RPHQARATLIHI+ELQI++R+QAVEDIKRRREEAQ LL ++  TLDG
Sbjct: 121 RPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDG 167

[Close]

BLAST of Pay0016294 vs. TAIR 10
Match: AT5G03500.3 (Mediator complex, subunit Med7 )

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-74
Identity = 135/167 (80.84%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60
           MATATYPPPPP+Y+LYKD+ ++  SAPEPPPPIEGTY+CFG NYTT+DVLPSLEEQGV Q
Sbjct: 1   MATATYPPPPPYYRLYKDFSENTDSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQ 60

Query: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120
           LYP+  N+DYKKELRSLNRELQLHILELAD+LV+RPSQYA+R+ EIS IFKNLHHLLNSL
Sbjct: 61  LYPKDSNLDYKKELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSL 120

Query: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 168
           RPHQARATLIHI+ELQI++R+QAVEDIKRRREEAQ LL ++  TLDG
Sbjct: 121 RPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDG 167

The following BLAST results are available for this feature:

BLAST of Pay0016294 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYW3	4.6e-75	82.04	Mediator of RNA polymerase II transcription subunit 7a OS=Arabidopsis thaliana O...	[more]
Q9LZD7	1.5e-73	80.84	Mediator of RNA polymerase II transcription subunit 7b OS=Arabidopsis thaliana O...	[more]
Q55DQ5	9.3e-28	44.68	Putative mediator of RNA polymerase II transcription subunit 7 OS=Dictyostelium ...	[more]
Q17MI0	2.3e-26	39.75	Mediator of RNA polymerase II transcription subunit 7 OS=Aedes aegypti OX=7159 G...	[more]
Q3T123	4.8e-24	37.95	Mediator of RNA polymerase II transcription subunit 7 OS=Bos taurus OX=9913 GN=M...	[more]

BLAST of Pay0016294 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKB8	2.9e-88	100.00	Mediator of RNA polymerase II transcription subunit 7 OS=Cucumis melo var. makuw...	[more]
A0A0A0LBQ7	2.9e-88	100.00	Mediator of RNA polymerase II transcription subunit 7 OS=Cucumis sativus OX=3659...	[more]
A0A1S3B7S4	2.9e-88	100.00	Mediator of RNA polymerase II transcription subunit 7 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DBY3	2.3e-85	96.43	Mediator of RNA polymerase II transcription subunit 7 OS=Momordica charantia OX=...	[more]
A0A6J1FG49	2.3e-85	96.43	Mediator of RNA polymerase II transcription subunit 7 OS=Cucurbita moschata OX=3...	[more]

BLAST of Pay0016294 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443001.1	5.9e-88	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 7a-like [Cucumis ...	[more]
XP_031737683.1	5.0e-87	98.81	LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 7a-like...	[more]
XP_004136548.2	7.2e-86	99.40	mediator of RNA polymerase II transcription subunit 7a [Cucumis sativus] >KAE864...	[more]
XP_022937468.1	4.7e-85	96.43	mediator of RNA polymerase II transcription subunit 7a [Cucurbita moschata] >KAG...	[more]
XP_022151348.1	4.7e-85	96.43	mediator of RNA polymerase II transcription subunit 7a-like [Momordica charantia...	[more]

BLAST of Pay0016294 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03220.1	3.2e-76	82.04	Mediator complex, subunit Med7	[more]
AT5G03500.1	1.0e-74	80.84	Mediator complex, subunit Med7	[more]
AT5G03500.2	1.0e-74	80.84	Mediator complex, subunit Med7	[more]
AT5G03500.3	1.0e-74	80.84	Mediator complex, subunit Med7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	COILS	Coil	Coil	coord: 130..168
None	No IPR available	PANTHER	PTHR21428	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7	coord: 2..168
IPR009244	Mediator complex, subunit Med7	PFAM	PF05983	Med7	coord: 4..157 e-value: 5.5E-45 score: 153.9
IPR044888	Mediator complex, subunit Med7 superfmaily	GENE3D	6.10.140.200		coord: 63..159 e-value: 1.5E-29 score: 103.9
IPR037212	Mediator complex, subunit Med7/Med21-like	SUPERFAMILY	140718	Mediator hinge subcomplex-like	coord: 66..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016294.1	Pay0016294.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity