Pay0015551 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015551
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like
Location	chr08: 922355 .. 923687 (+)
RNA-Seq Expression	Pay0015551
Synteny	Pay0015551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACGCTCTCTCTTTCTTCTCCATTATTTATTTCTTTATTTACGCTTTTCTATTTCTTCTTAACTCCTTCACTTCTGTTCCCACTCCCATTCTCAATCTCTTTCCCTATTTTCATTATTTATCGATCATGTTGGCCATGGAAGCCGCCTCCTCCGCCGTCACCAGTTACACCTCCGCCTCCACCACCTCCGACAACCACCTCCACTATCCTCTCTTGCTCCCCGCACCACCATCTCCTCCCACACCTGCTCTCAGCAGGTACTTTAATTTTATTTCATCCCATTATTAATCTCATCATTTTCATCTCTCTCAATTTTAAAATCATCCGAGTTTACTTGCCTCAATTTCAACAAATTTATTGATATTTAAGAAATGGAATATTTATTTAAGAACTGCTAGTTTAAACTTATCCGTTTCAGCTAGAGATAAGTAAAAACAATAGAATGGCAGAGTTGTTTAGTATTGAATAATAATACCATATTTCATTCCAAAATTAATCTATAAGAATATGAGTAGTTCACTTATTTTAAAACAAATGTAAAAAGTTGTTATGTATATATAAAGTTTTATAGTTGGAAAAGAAATTGCGTAGGAGGAGCATGCACTCATAATAACAATTTTTTAAAAAGAAGGAAATTAGAGTAGTAGATGAGTTGAGTCGACTACGCTACCCGTTAACGCAGGTACGAATCACAAAAGCGGCGAGACTGGAACACGTTCGGGCAGTACCTAAAGAACCACCGCCCACCACTGACGCTATCCCGTTGTAGCGGGGCTCATATTCTGGAGTTCCTCCGCTACCTGGACCAGTTCGGTAAGACGAAGGTCCACACCTCCAGCTGTCCCTTCTTCGGTCACCCACAACCCCCTGCTCCCTGCCCCTGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCAGCTTTCGAGGAGAACGGCGGCCAACCTGAGACCAACCCCTTCGGGACACGAGCCGTGAGGCTGTATTTAAGGGAAGTTAGAGAGTCGCAGGCGAAAGCCAGAGGAATTGCTTACGAGAAAAAGAAGAGGAAGAAATCCGCCATGGCTTCGCTAAAGATCAACCACCACCAACCCATGCCTTCCTAATTTTCATTCTAATAAGCTATGTATTATTAATCCATTAATCTTAATCTCTCCCTTTGATTAATTGGGGAAACCCACTGTATCAAAATTTAGTATATATAGTTTAGTATTTTGTTTAATTACCCCCTTCCCAGTTCCCATTTCCCAGTTCCAACCCCTTGTTTACATATTTATCGTTATTGATTAGACAATTTTCAACTTCATGCTCGT

mRNA sequence

AAAACGCTCTCTCTTTCTTCTCCATTATTTATTTCTTTATTTACGCTTTTCTATTTCTTCTTAACTCCTTCACTTCTGTTCCCACTCCCATTCTCAATCTCTTTCCCTATTTTCATTATTTATCGATCATGTTGGCCATGGAAGCCGCCTCCTCCGCCGTCACCAGTTACACCTCCGCCTCCACCACCTCCGACAACCACCTCCACTATCCTCTCTTGCTCCCCGCACCACCATCTCCTCCCACACCTGCTCTCAGCAGGTACGAATCACAAAAGCGGCGAGACTGGAACACGTTCGGGCAGTACCTAAAGAACCACCGCCCACCACTGACGCTATCCCGTTGTAGCGGGGCTCATATTCTGGAGTTCCTCCGCTACCTGGACCAGTTCGGTAAGACGAAGGTCCACACCTCCAGCTGTCCCTTCTTCGGTCACCCACAACCCCCTGCTCCCTGCCCCTGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCAGCTTTCGAGGAGAACGGCGGCCAACCTGAGACCAACCCCTTCGGGACACGAGCCGTGAGGCTGTATTTAAGGGAAGTTAGAGAGTCGCAGGCGAAAGCCAGAGGAATTGCTTACGAGAAAAAGAAGAGGAAGAAATCCGCCATGGCTTCGCTAAAGATCAACCACCACCAACCCATGCCTTCCTAATTTTCATTCTAATAAGCTATGTATTATTAATCCATTAATCTTAATCTCTCCCTTTGATTAATTGGGGAAACCCACTGTATCAAAATTTAGTATATATAGTTTAGTATTTTGTTTAATTACCCCCTTCCCAGTTCCCATTTCCCAGTTCCAACCCCTTGTTTACATATTTATCGTTATTGATTAGACAATTTTCAACTTCATGCTCGT

Coding sequence (CDS)

ATGTTGGCCATGGAAGCCGCCTCCTCCGCCGTCACCAGTTACACCTCCGCCTCCACCACCTCCGACAACCACCTCCACTATCCTCTCTTGCTCCCCGCACCACCATCTCCTCCCACACCTGCTCTCAGCAGGTACGAATCACAAAAGCGGCGAGACTGGAACACGTTCGGGCAGTACCTAAAGAACCACCGCCCACCACTGACGCTATCCCGTTGTAGCGGGGCTCATATTCTGGAGTTCCTCCGCTACCTGGACCAGTTCGGTAAGACGAAGGTCCACACCTCCAGCTGTCCCTTCTTCGGTCACCCACAACCCCCTGCTCCCTGCCCCTGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCAGCTTTCGAGGAGAACGGCGGCCAACCTGAGACCAACCCCTTCGGGACACGAGCCGTGAGGCTGTATTTAAGGGAAGTTAGAGAGTCGCAGGCGAAAGCCAGAGGAATTGCTTACGAGAAAAAGAAGAGGAAGAAATCCGCCATGGCTTCGCTAAAGATCAACCACCACCAACCCATGCCTTCCTAA

Protein sequence

MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASLKINHHQPMPS

Homology

[Close]

BLAST of Pay0015551 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.9e-70
Identity = 121/144 (84.03%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 35  PSPPTPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHT 94
           PS  +P+LSRYESQKRRDWNTFGQYL+NHRPPL+LSRCSGAH+LEFL+Y+DQFGKTKVHT
Sbjct: 71  PSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHT 130

Query: 95  SSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLRE 154
             CPF+GHP PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFG RAVRLYLRE
Sbjct: 131 PVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLRE 190

Query: 155 VRESQAKARGIAYEKKKRKKSAMA 179
           VRE+QA+ARGI+YEKKKRKK + A
Sbjct: 191 VRETQARARGISYEKKKRKKPSSA 214

[Close]

BLAST of Pay0015551 vs. ExPASy Swiss-Prot
Match: Q6K5X1 (Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.9e-70
Identity = 121/144 (84.03%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 35  PSPPTPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHT 94
           PS  +P+LSRYESQKRRDWNTFGQYL+NHRPPL+LSRCSGAH+LEFL+Y+DQFGKTKVHT
Sbjct: 71  PSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHT 130

Query: 95  SSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLRE 154
             CPF+GHP PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFG RAVRLYLRE
Sbjct: 131 PVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLRE 190

Query: 155 VRESQAKARGIAYEKKKRKKSAMA 179
           VRE+QA+ARGI+YEKKKRKK + A
Sbjct: 191 VRETQARARGISYEKKKRKKPSSA 214

[Close]

BLAST of Pay0015551 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.2e-69
Identity = 128/168 (76.19%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 7   ASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYLKNHRPP 66
           A++A T+ TS+S++S +               T  LSRYE+QKRRDWNTFGQYL+NHRPP
Sbjct: 22  AAAATTTTTSSSSSSSS-----------GGSGTNQLSRYENQKRRDWNTFGQYLRNHRPP 81

Query: 67  LTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGR 126
           L+LSRCSGAH+LEFLRYLDQFGKTKVHT  CPFFGHP PPAPC CPLRQAWGSLDALIGR
Sbjct: 82  LSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGR 141

Query: 127 LRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKK 175
           LRAAFEENGG PETNPFG RAVRLYLREVR+SQAKARGI+YEKKKRK+
Sbjct: 142 LRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Pay0015551 vs. ExPASy Swiss-Prot
Match: Q7XDD0 (Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68
Identity = 121/160 (75.62%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 43  SRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGH 102
           SRYESQKRRDWNTFGQYL+NHRPPL+L+RCSGAH+LEFLRYLDQFGKTKVH  +CPFFGH
Sbjct: 39  SRYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLEFLRYLDQFGKTKVHAPACPFFGH 98

Query: 103 PQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKA 162
           P PPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG+PE NPFG RAVRLYLREVRE QA+A
Sbjct: 99  PAPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPENNPFGARAVRLYLREVREHQARA 158

Query: 163 RGIAYEKKKRKK-------------SAMASLKINHHQPMP 190
           RG++YEKKKRKK             +A  +L  +HH P P
Sbjct: 159 RGVSYEKKKRKKPPHPSSAAAAHDDAANGALHHHHHMPPP 198

[Close]

BLAST of Pay0015551 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.1e-68
Identity = 123/166 (74.10%), Postives = 138/166 (83.13%), Query Frame = 0


Query: 33  APPSPPTPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKV 92
           AP SP     SRYE+QKRRDWNTFGQYL+NHRPPL+L++CSGAH+LEFLRYLDQFGKTKV
Sbjct: 35  APQSP-----SRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRYLDQFGKTKV 94

Query: 93  HTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYL 152
           HT++CPFFGHP PPAPCPCPLRQAWGSLDAL+GRLRAAFEENGG+PE+NPF  RAVRLYL
Sbjct: 95  HTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAARAVRLYL 154

Query: 153 REVRESQAKARGIAYEKKKRKKSAMASLK---------INHHQPMP 190
           REVRE QA+ARG++YEKKKRKK     L+           HH P P
Sbjct: 155 REVREHQARARGVSYEKKKRKKPQQQQLQGGDSSGLHGHQHHPPPP 195

[Close]

BLAST of Pay0015551 vs. ExPASy TrEMBL
Match: A0A5A7UB86 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009900 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.0e-105
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60
           MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL
Sbjct: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60

Query: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120
           KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL
Sbjct: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120

Query: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180
           DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL
Sbjct: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180

Query: 181 KINHHQPMPS 191
           KINHHQPMPS
Sbjct: 181 KINHHQPMPS 190

[Close]

BLAST of Pay0015551 vs. ExPASy TrEMBL
Match: A0A1S3AZK8 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo OX=3656 GN=LOC103484288 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.0e-105
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60
           MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL
Sbjct: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60

Query: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120
           KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL
Sbjct: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120

Query: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180
           DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL
Sbjct: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180

Query: 181 KINHHQPMPS 191
           KINHHQPMPS
Sbjct: 181 KINHHQPMPS 190

[Close]

BLAST of Pay0015551 vs. ExPASy TrEMBL
Match: A0A0A0KPA1 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526250 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 184/191 (96.34%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MLAME-AASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQY 60
           MLAME  ASSAVT+YTSASTTSDNH HYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQY
Sbjct: 1   MLAMEVTASSAVTTYTSASTTSDNHPHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQY 60

Query: 61  LKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGS 120
           LKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGS
Sbjct: 61  LKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGS 120

Query: 121 LDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMAS 180
           LDALIGRLRAAFEENGGQP+TNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKS MA 
Sbjct: 121 LDALIGRLRAAFEENGGQPDTNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSGMAP 180

Query: 181 LKINHHQPMPS 191
           LKINHHQPMPS
Sbjct: 181 LKINHHQPMPS 191

[Close]

BLAST of Pay0015551 vs. ExPASy TrEMBL
Match: A0A6J1IPW9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478381 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88
Identity = 172/197 (87.31%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSAST----TSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTF 60
           MLAME+A SAV SY+SAST    TSDNH HYPLL PAPPSPP PALSRYESQKRRDWNTF
Sbjct: 1   MLAMESA-SAVNSYSSASTTTTSTSDNHHHYPLLEPAPPSPPPPALSRYESQKRRDWNTF 60

Query: 61  GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQA 120
           GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQA
Sbjct: 61  GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQA 120

Query: 121 WGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSA 180
           WGSLDALIGRLRAAFEENGG PETNPFGTRAVRLYLREVR+SQAKARGIAYE KKRKKSA
Sbjct: 121 WGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYE-KKRKKSA 180

Query: 181 MASLKINHH----QPMP 190
           MA LK +      +PMP
Sbjct: 181 MAPLKKHQRHAPDEPMP 195

[Close]

BLAST of Pay0015551 vs. ExPASy TrEMBL
Match: A0A6J1ED05 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433058 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 163/189 (86.24%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60
           MLAME+ S++ T+ TS S    +HL YPLL PAPPSPP PALSRYESQKRRDWNTFGQYL
Sbjct: 1   MLAMESVSTSTTT-TSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYL 60

Query: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120
           KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQAWGSL
Sbjct: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSL 120

Query: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180
           DALIGRLRAAFEENGG PETNPFGTRAVRLYLREVR+SQAKARGIAYEKKKRKKSAMA L
Sbjct: 121 DALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPL 180

Query: 181 KINHHQPMP 190
           K  H +  P
Sbjct: 181 K-KHQRHAP 187

[Close]

BLAST of Pay0015551 vs. NCBI nr
Match: XP_008439509.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucumis melo] >KAA0052458.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucumis melo var. makuwa] >TYK13364.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.0e-104
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60
           MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL
Sbjct: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60

Query: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120
           KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL
Sbjct: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120

Query: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180
           DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL
Sbjct: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180

Query: 181 KINHHQPMPS 191
           KINHHQPMPS
Sbjct: 181 KINHHQPMPS 190

[Close]

BLAST of Pay0015551 vs. NCBI nr
Match: XP_004134890.2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 2.6e-100
Identity = 184/191 (96.34%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MLAME-AASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQY 60
           MLAME  ASSAVT+YTSASTTSDNH HYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQY
Sbjct: 1   MLAMEVTASSAVTTYTSASTTSDNHPHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQY 60

Query: 61  LKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGS 120
           LKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGS
Sbjct: 61  LKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGS 120

Query: 121 LDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMAS 180
           LDALIGRLRAAFEENGGQP+TNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKS MA 
Sbjct: 121 LDALIGRLRAAFEENGGQPDTNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSGMAP 180

Query: 181 LKINHHQPMPS 191
           LKINHHQPMPS
Sbjct: 181 LKINHHQPMPS 191

[Close]

BLAST of Pay0015551 vs. NCBI nr
Match: XP_038881876.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida])

HSP 1 Score: 341.3 bits (874), Expect = 5.5e-90
Identity = 175/194 (90.21%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSASTT---SDNHLH--YPLLLPAPPSPPTPALSRYESQKRRDWNT 60
           MLAM+AA SAV SYTSASTT   SDNH H  YPLL+PAPPSPP PALSRYESQKRRDWNT
Sbjct: 1   MLAMQAA-SAVNSYTSASTTTSNSDNHHHRQYPLLVPAPPSPPPPALSRYESQKRRDWNT 60

Query: 61  FGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQ 120
           FGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQ
Sbjct: 61  FGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQ 120

Query: 121 AWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKS 180
           AWGSLDALIGRLRAAFEENGG PETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKS
Sbjct: 121 AWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKS 180

Query: 181 AMASLKINHHQPMP 190
            M S+K N  QPMP
Sbjct: 181 GMPSVKKN--QPMP 191

[Close]

BLAST of Pay0015551 vs. NCBI nr
Match: XP_023544575.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.2 bits (866), Expect = 4.6e-89
Identity = 174/195 (89.23%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSAST----TSDN--HLHYPLLLPAPPSPPTPALSRYESQKRRDWN 60
           MLAME+A SAV SYTSAST    TSDN  HLHYPLL PAPPSPP PALSRYESQKRRDWN
Sbjct: 1   MLAMESA-SAVNSYTSASTTTTSTSDNHHHLHYPLLEPAPPSPPPPALSRYESQKRRDWN 60

Query: 61  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLR 120
           TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLR
Sbjct: 61  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 120

Query: 121 QAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKK 180
           QAWGSLDALIGRLRAAFEENGG PETNPFGTRAVRLYLREVR+SQAKARGIAYEKKKRKK
Sbjct: 121 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 180

Query: 181 SAMASLKINHHQPMP 190
           SAMA LK  H +  P
Sbjct: 181 SAMAPLK-KHQRHAP 193

[Close]

BLAST of Pay0015551 vs. NCBI nr
Match: XP_022978370.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita maxima])

HSP 1 Score: 334.3 bits (856), Expect = 6.7e-88
Identity = 172/197 (87.31%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MLAMEAASSAVTSYTSAST----TSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTF 60
           MLAME+A SAV SY+SAST    TSDNH HYPLL PAPPSPP PALSRYESQKRRDWNTF
Sbjct: 1   MLAMESA-SAVNSYSSASTTTTSTSDNHHHYPLLEPAPPSPPPPALSRYESQKRRDWNTF 60

Query: 61  GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQA 120
           GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQA
Sbjct: 61  GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQA 120

Query: 121 WGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSA 180
           WGSLDALIGRLRAAFEENGG PETNPFGTRAVRLYLREVR+SQAKARGIAYE KKRKKSA
Sbjct: 121 WGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYE-KKRKKSA 180

Query: 181 MASLKINHH----QPMP 190
           MA LK +      +PMP
Sbjct: 181 MAPLKKHQRHAPDEPMP 195

[Close]

BLAST of Pay0015551 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 262.3 bits (669), Expect = 3.0e-70
Identity = 128/168 (76.19%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 7   ASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYLKNHRPP 66
           A++A T+ TS+S++S +               T  LSRYE+QKRRDWNTFGQYL+NHRPP
Sbjct: 22  AAAATTTTTSSSSSSSS-----------GGSGTNQLSRYENQKRRDWNTFGQYLRNHRPP 81

Query: 67  LTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGR 126
           L+LSRCSGAH+LEFLRYLDQFGKTKVHT  CPFFGHP PPAPC CPLRQAWGSLDALIGR
Sbjct: 82  LSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGR 141

Query: 127 LRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKK 175
           LRAAFEENGG PETNPFG RAVRLYLREVR+SQAKARGI+YEKKKRK+
Sbjct: 142 LRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Pay0015551 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-68
Identity = 129/184 (70.11%), Postives = 146/184 (79.35%), Query Frame = 0


Query: 8   SSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYLKNHRPPL 67
           SS+VT  T    T       PL   +  S P+   SRYE+QKRRDWNTFGQYL+NHRPPL
Sbjct: 27  SSSVTGATGGEATQ------PL---SSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPL 86

Query: 68  TLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRL 127
           +LSRCSGAH+LEFLRYLDQFGKTKVHT+ C F+GHP PPAPCPCPLRQAWGSLDALIGRL
Sbjct: 87  SLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRL 146

Query: 128 RAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKK-----SAMASLKI 187
           RAAFEENGG+PETNPFG RAVRLYLREVR+ Q+KARG++YEKKKRK+     S  +S  +
Sbjct: 147 RAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPSSSTSSSSAV 201

[Close]

BLAST of Pay0015551 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 247.7 bits (631), Expect = 7.7e-66
Identity = 113/147 (76.87%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 28  PLLLPAPPSPPTPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQF 87
           P  + +PP+ P    SRYESQKRRDWNTF QYLKNH+PPL LSRCSGAH++EFL+YLDQF
Sbjct: 19  PSFVSSPPATP----SRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQF 78

Query: 88  GKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRA 147
           GKTKVH ++CP+FGH QPP+PC CPL+QAWGSLDALIGRLRAA+EENGG+P++NPF  RA
Sbjct: 79  GKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARA 138

Query: 148 VRLYLREVRESQAKARGIAYEKKKRKK 175
           VR+YLREVRESQAKARGI YEKKKRK+
Sbjct: 139 VRIYLREVRESQAKARGIPYEKKKRKR 161

[Close]

BLAST of Pay0015551 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-63
Identity = 111/155 (71.61%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 40  PALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPF 99
           P+ SRYE+QKRRDWNTF QYL+NHRPPL+L  CSGAH+LEFLRYLDQFGKTKVH  +C F
Sbjct: 21  PSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAF 80

Query: 100 FGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQ 159
           FG P PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFG+RAVRL+LREVR+ Q
Sbjct: 81  FGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQ 140

Query: 160 AKARGIAYEKKKR-----KKSAMASLKINHHQPMP 190
           AKARG++YEKK++     K      L++   Q  P
Sbjct: 141 AKARGVSYEKKRKRVNRQKPQTQPPLQLQQQQQQP 175

[Close]

BLAST of Pay0015551 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 231.9 bits (590), Expect = 4.3e-61
Identity = 105/142 (73.94%), Postives = 127/142 (89.44%), Query Frame = 0


Query: 32  PAPPSPPTPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTK 91
           P+  S P P+ SRYE+QKRRDWNTF QYL+NH PPL+L+ CSGAH+L+FLRYLDQFGKTK
Sbjct: 22  PSSFSSP-PSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTK 81

Query: 92  VHTSSCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGQPETNPFGTRAVRLY 151
           VH  +C FFG P PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PET+PFG+R+VR++
Sbjct: 82  VHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIF 141

Query: 152 LREVRESQAKARGIAYEKKKRK 174
           LREVR+ QAK+RG++YEKK+++
Sbjct: 142 LREVRDFQAKSRGVSYEKKRKR 162

The following BLAST results are available for this feature:

BLAST of Pay0015551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XAV5	2.9e-70	84.03	Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1	[more]
Q6K5X1	2.9e-70	84.03	Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1	[more]
Q9LW68	4.2e-69	76.19	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q7XDD0	1.2e-68	75.63	Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1	[more]
A2XVI8	2.1e-68	74.10	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]

BLAST of Pay0015551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UB86	5.0e-105	100.00	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AZK8	5.0e-105	100.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KPA1	1.3e-100	96.34	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526250 PE=3 S...	[more]
A0A6J1IPW9	3.2e-88	87.31	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ED05	3.9e-86	86.24	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Pay0015551 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439509.1	1.0e-104	100.00	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucumis melo] >KAA00...	[more]
XP_004134890.2	2.6e-100	96.34	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Cucumis sativus]	[more]
XP_038881876.1	5.5e-90	90.21	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida]	[more]
XP_023544575.1	4.6e-89	89.23	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978370.1	6.7e-88	87.31	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita maxima]	[more]

BLAST of Pay0015551 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23290.2	3.0e-70	76.19	Protein of unknown function (DUF640)	[more]
AT2G31160.1	1.6e-68	70.11	Protein of unknown function (DUF640)	[more]
AT1G07090.1	7.7e-66	76.87	Protein of unknown function (DUF640)	[more]
AT5G28490.1	6.1e-63	71.61	Protein of unknown function (DUF640)	[more]
AT3G04510.1	4.3e-61	73.94	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 38..157 e-value: 3.9E-66 score: 220.9
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 44..171 score: 83.882278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..190
None	No IPR available	PANTHER	PTHR31165:SF65	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-LIKE	coord: 11..177
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 11..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015551.1	Pay0015551.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus