Pay0015426 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015426
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr10: 9672110 .. 9672978 (-)
RNA-Seq Expression	Pay0015426
Synteny	Pay0015426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAAAAATTGTATAGTTGTTTTTAGTGTTAATTTATTTTCAATGATTTCTAATTCATTTTAATATTTTACAGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTATATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACACAAACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGAAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAAATGAGCTACAGCAACAAGAGAATGCAGCAGTACCCGGACAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCGGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGA

mRNA sequence

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTATATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACACAAACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGAAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAAATGAGCTACAGCAACAAGAGAATGCAGCAGTACCCGGACAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCGGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTATATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACACAAACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGAAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAAATGAGCTACAGCAACAAGAGAATGCAGCAGTACCCGGACAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCGGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGA

Protein sequence

MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

Homology

[Close]

BLAST of Pay0015426 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 7.5e-144
Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGA MSHLRSNNIRLRNVA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485

Query: 121 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 180
           QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 240
           SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 605

Query: 241 QRVQSRRRQPARNRRRPGCGTH 263
           QRVQSRRRQPARNRRRPGCGTH
Sbjct: 606 QRVQSRRRQPARNRRRPGCGTH 627

[Close]

BLAST of Pay0015426 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140
Identity = 255/262 (97.33%), Postives = 260/262 (99.24%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133

Query: 121  QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 180
            QTQSEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGSDP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193

Query: 181  SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 240
            SSSYMHGHGRGRG+HNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSDEQQQQEN EEIQQ
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 1253

Query: 241  QRVQSRRRQPARNRRRPGCGTH 263
            QRVQSRRRQPARNRRRPGCGTH
Sbjct: 1254 QRVQSRRRQPARNRRRPGCGTH 1275

[Close]

BLAST of Pay0015426 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140
Identity = 255/262 (97.33%), Postives = 260/262 (99.24%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372

Query: 121 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 180
           QTQSEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGSDP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 240
           SSSYMHGHGRGRG+HNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSDEQQQQEN EEIQQ
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 492

Query: 241 QRVQSRRRQPARNRRRPGCGTH 263
           QRVQSRRRQPARNRRRPGCGTH
Sbjct: 493 QRVQSRRRQPARNRRRPGCGTH 514

[Close]

BLAST of Pay0015426 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.5e-133
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 744  MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 804  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121  -TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
             TQTQSEHNYVSPVMMMPTFG TYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 864  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181  DPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEI 240
            DPSSSYMHGHGRGRGEHNEYLYY+VPAAVPEQS+E QQQENAAVP QSDEQQQQEN EEI
Sbjct: 924  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983

Query: 241  QQQRVQSRRRQPARNRRRPGCGTH 263
            QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 984  QQQRVQIRRRQLAKNRQRPGCGTH 1007

[Close]

BLAST of Pay0015426 vs. ExPASy TrEMBL
Match: A0A1S3BLK4 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.5e-133
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 -TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            TQTQSEHNYVSPVMMMPTFG TYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEI 240
           DPSSSYMHGHGRGRGEHNEYLYY+VPAAVPEQS+E QQQENAAVP QSDEQQQQEN EEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

Query: 241 QQQRVQSRRRQPARNRRRPGCGTH 263
           QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 241 QQQRVQIRRRQLAKNRQRPGCGTH 264

[Close]

BLAST of Pay0015426 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 519.6 bits (1337), Expect = 1.5e-143
Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGA MSHLRSNNIRLRNVA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485

Query: 121 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 180
           QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 240
           SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 605

Query: 241 QRVQSRRRQPARNRRRPGCGTH 263
           QRVQSRRRQPARNRRRPGCGTH
Sbjct: 606 QRVQSRRRQPARNRRRPGCGTH 627

[Close]

BLAST of Pay0015426 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 508.1 bits (1307), Expect = 4.6e-140
Identity = 255/262 (97.33%), Postives = 260/262 (99.24%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372

Query: 121 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 180
           QTQSEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGSDP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 240
           SSSYMHGHGRGRG+HNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSDEQQQQEN EEIQQ
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 492

Query: 241 QRVQSRRRQPARNRRRPGCGTH 263
           QRVQSRRRQPARNRRRPGCGTH
Sbjct: 493 QRVQSRRRQPARNRRRPGCGTH 514

[Close]

BLAST of Pay0015426 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 508.1 bits (1307), Expect = 4.6e-140
Identity = 255/262 (97.33%), Postives = 260/262 (99.24%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133

Query: 121  QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 180
            QTQSEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNS+AGQSSTDFGQQYYDLGSDP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193

Query: 181  SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 240
            SSSYMHGHGRGRG+HNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSDEQQQQEN EEIQQ
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 1253

Query: 241  QRVQSRRRQPARNRRRPGCGTH 263
            QRVQSRRRQPARNRRRPGCGTH
Sbjct: 1254 QRVQSRRRQPARNRRRPGCGTH 1275

[Close]

BLAST of Pay0015426 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 484.2 bits (1245), Expect = 7.2e-133
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 -TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
            TQTQSEHNYVSPVMMMPTFG TYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEI 240
           DPSSSYMHGHGRGRGEHNEYLYY+VPAAVPEQS+E QQQENAAVP QSDEQQQQEN EEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

Query: 241 QQQRVQSRRRQPARNRRRPGCGTH 263
           QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 241 QQQRVQIRRRQLAKNRQRPGCGTH 264

[Close]

BLAST of Pay0015426 vs. NCBI nr
Match: TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 484.2 bits (1245), Expect = 7.2e-133
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+A
Sbjct: 744  MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 804  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121  -TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
             TQTQSEHNYVSPVMMMPTFG TYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS
Sbjct: 864  QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181  DPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEI 240
            DPSSSYMHGHGRGRGEHNEYLYY+VPAAVPEQS+E QQQENAAVP QSDEQQQQEN EEI
Sbjct: 924  DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983

Query: 241  QQQRVQSRRRQPARNRRRPGCGTH 263
            QQQRVQ RRRQ A+NR+RPGCGTH
Sbjct: 984  QQQRVQIRRRQLAKNRQRPGCGTH 1007

The following BLAST results are available for this feature:

BLAST of Pay0015426 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0015426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIP6	7.5e-144	99.62	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	2.3e-140	97.33	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	2.3e-140	97.33	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3DUI1	3.5e-133	93.56	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A1S3BLK4	3.5e-133	93.56	mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of Pay0015426 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067080.1	1.5e-143	99.62	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0036767.1	4.6e-140	97.33	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYJ95836.1	4.6e-140	97.33	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
XP_008449513.1	7.2e-133	93.56	PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X...	[more]
TYK27427.1	7.2e-133	93.56	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of Pay0015426 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015426.1	Pay0015426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
molecular_function	GO:0008270	zinc ion binding