Pay0012829 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012829
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Location	chr06: 35245084 .. 35250774 (+)
RNA-Seq Expression	Pay0012829
Synteny	Pay0012829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTTTTGTTTGATTCCATTCCATAGAGACCTCTCGTTTGGAGGAAAGAATATCAATCATCAATACTCTCTCTCTCTCTCTCTTTCTCTTTTGCTTTCAATTTTCACTTCGAAGTTCAGCAGAAATGCATTTCTCCAACGCCAATTTTGCTTCTTCCTCTACCATTTCCACTGCGGTTCTTCCACTTCCTTCTCCAAAGGTAATTTTTCCATTTTCCTATCCTTTTTCCATGGCGTTCTCTTCAATCTCTACTTCTAAATCCTTGTTTTCTTTCTCTGTTTCTATCTTTAGCTTGCTTGTTTCAGGATTTCGCACCAGAAAACTCATCGGAGTTTCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAGAGTTTTGCCGCCGAGTTTGAGTAATCGTCAGAATAGCAATGCGTCGACTGATTTAGATGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGTGTGGTTTCAATCACTTTTGTTACTTCTTGTAGTCATTTTTCCTACGATCACTTCTCTGCTGTGTATTTCCTTGTGTCATTTTGGCGGTTTTGCTACTTCAATTAACCTCTCTTAGCTTTTCATTTCACGCGTTTGTGTTTGTTTTTCACATTTCGACTATCGTTTGCGGATCTCTTCTTTGGAATCTCTCTCTGTTTTTTTTTTACTTCTTGTAACCATTTTTCTACGATCACTTTACTACTGAGTAAGTTTTCTTGTGTCATTTTAGCGGTTAGCTACTTCAATTAACTTCTCTTAGCTTTTCATTTCATGTTTTTTGTGTTTTTTTTACATTTCATTTAGCTTTGAGATGTGAATATCAAATACGGATCTCGTTTTTAGAATTTCTTTTGTTTTCTACGATCACTTCACTGCTGTATCTGCTACTTCCATGAACTTCGCTGAAATTTTAATTTCATGTTGTCTTCTATTGATGTTTTTCACATTACATTTAGCTTTGAGATGTAACTACTATTTACGGGCTTCCTCTTTCAAACAACTACAGGCGAAAAAAGCAACTGAAGCTGCTTTAAGAGACAACAAACAGTTGATGGTTAGTTTTGAGCATATTTTGATTTCTGTGGAACACGAGAAGCATTTATAGATTGATTTGATTGATTAAATAGTGTGAAATTTCTTATCTAAACAATTCTGGTCTAGGAGATCGAATTTCCAACTGCTGGTCTTGAATCAGTTCCAGGTTCTTTCCTCTTCTTGAATTGTTGCATTTTAATTGCGTTATCATCTCAAATTGTTCCCAGGCCTCTCTAGTAACATGTTTTGCCTGTTACAGACCGTATAACCTTATGTATCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGCGATTGCTTCATAGATCCACTGAAAGCCACTCGCACCAGAGTAGTAATGTTCTACTGCATTATCCTTATATTTTCTTTACAGAATTAAATGTTTGAATGCACTTAAATTTATCACTGGAAGGGACTAAAAAGCATATAATAGGTGAAATCTTCTTCAGTCTATATATGTTTCTTTCCAAAATTTCATCCACATAAAGATCATAATACGAGTTGTCCTTTTTTCTTGAGAAACTATTCAAAGAGGCCTGGTTAACGTGTTCAACACTTCTATGGCATTGGATATATGAGAAAGAGGTTTTCCGAATTTATATCTAATGGTCATTAGGAGTTAAAAAAAAAAAAAAAAATTAAATCTCCATCCAATGGTCGATATAATGCATTCATATTAGGACAAACTCGTATGATAATTTGTTCTTTTCCTTTCCTTCTGACGGCAGTACTAAAAATTCCTCTTGTGCGTAATACTATAATTTAGCAAAATCTTCTTGTTTTCTTCACGATTTGTCACTTTTTTCCCTCTGAAATATCTTCATAGTATAACATTTGAATCAGGAAAAGTAATATAGCTGGCATCCTTTTTGTGTTAGCAATCACGCTTTTGTTTGTAATATGCTTTTTGTCCGAATGTTCTTCTTTCTCTTTTCTGACCATATAAAAGTACTTTTTAACATTCTAGACTGTTAGTTGTAGTAAAGAGAAACATATTCAGTTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACGGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCTGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGGTTAGTGAACCCTTCATTTGTTTCTTATCATCTTTATTTTAAGCCGTTTGTACCTTTTTTTATAAGGCCATTTATCTGTTTTTCTTTTTTTTAGTTTTTGAAAATTAAGCCTATAAATATCAATTTCAACTTAAATTTCTTTGTTACTTACAATTTCCACCAACAAACAAGTTTTGAAAACTAAAAAAGAAATTAAAATCTTCTCTTGGTTGTTAAAATTTAGCTAAGAATACAACTTGTTTGGTTAAAGAAATATAAATATTATCCTAAGAAAATAGGAGAAAATAGATTTAATGTTTTAAATCCAAACTCAAATAATCACCAAATTGAGCATAAATTAGGGCTTTTCTGATTAGTCATTTTTTTTTCCTCATTACGTTACAGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCCGTCCAAAACACTACTCGAAAACTCATAATATTCAACGGAGAGCTCGACCGCATTAGATCCGGCTGTATCCTTTTATCAACTTTTCTATTACCCAATGAAGAGTGGGTTTGGGATCCTCGTTTTAAACGGTAAAATTTCTAACTAAAAATTGGTTAAATTGCATGTTTAGGCTAATGTTTATGATATCTTAAATTTAGTTTGTATTTGATTAGTTCATGAAAGTTTATGAGCTGTCTTGAATCTTTGAATTTTGTGTCTTATAGGTTTTAATAGGCCTTTTCTAAAATCTACTCGACTAATTAGACCTTAAATTAAGGATTAATAGTTTATTAGAGAATCGGAATCATGAATATTATCTCACTTTGGTATGCTTTTGTGAATTTAGTAATTGTCAATCGTCAAATATTATAATTTGTTTATATTTATTACCATTTGTGACTGTCGAACTAACTCTCTTAGATTAGAAAAGGTAATTATCATGGATAACAAATTTTATAATAACTAAGTGTATAACAAATATCCTTAAAAAAATTTAATTTCAAATATAGTAAAGTCCAGTATATTTCTATGGTCGATGGATGTGTAGGGTCTATTTGTCTAACGATAGTCTATCATTGATATATCACACGAAAGTTTATCAACCATAGACTACTATCACTAAAAAACTTTGCTATATTTGTAATTTTTTTTAAACGTTGTTATATATATACTAATATTTTGAATCTAATGGTTGTATTTGCAATGGTTAAGAGAAAGTATGTCACATTGACAATGTTTGTGACATCAATATTTAATTGGTATATTTGCTGACGGAGAAAAATTATAAACTTACTACTAGTACTTTAAGTTTATAGCAATTTAATTCTTTTGATTTTAATATGTAATATTATATTTTATAATTGTAATGTTATTTGTAGTAACTACTAATTTAAGGAAAATTTTTAAATATTATGTGTTGATCAATAGCTAATTAGGACCAAATGTATTTATAAAATATAAAAATTTAGTCGCAACGTAGTAAAAAAACGTTAATTTTGATTGAGATTCCCATGGTAGAATAATTATCACGAAGGGAAAGACCCGACATTAGATCGAAGTAACAATAGCTTTATCGTGATCGACGAGGCGGACTTCAACCATTCTTTTTACATTATATTATTGTTAGCTTTATTATATAATGTGAACCTTAATAATAGGTGAAAGACTATCCGCCATTTTTCTATCCAAAGCTGGCGGCTCTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGGTTTCACATTTACTTTTAAATCCTCGCATTCCTATGATTCTTTCATTATAACAAACTTAAATTAAAATGTCATACTTAGGCTTAATAATCACTTGATTTTTGTTACTTAGTTATGAAAATTAAGTCTATAAATATTCATTTCACTTGTAAGTTTCTTGCTTTTCTAGCTATACTTTTTATTAATATTTTAAAAAATCATGCCTAACTTCATAAAGAAAGAAAAAAAATATAAGTTTTCAAAAACTTCATTTTGTTTTCCAAATTTGACTGAGTAAATCAACTCTTAAATCAACTCTTGCACTTGAATATAATTAGTTATGAGAAGTAGAGGAAAAATAAACATAACTTTCAAGAACCAAAAATCAAAAACAAAATAATTATCAAACAAAACCTTAATTTTTCTTTTCTTGTTTAATAAACTATTTTTTTTTACTTTCAAAATTATTGCAGAATCAACAGTTGTCCCATTAAGTTAGTTACCGTGCAACCCACGATTAAAAAGGAAAAACAGTACTTGATTTCAAAAACCAAATACAAAAACTAGCTACTCAAAGGAGCTTTATCTATTATTTTTTTTCATTTAAAGAACTACTTTTTTTTTAGTTTTCAAATCTTTGCTTAATTTTTTAAAACACAGGCAGAAAATGAACAACAAAACAAGAAAGTTTACGAGTAAAAATATTGTTTATAAGCTTAATTTTCAAACTGACGTTTGATTTTTTTTTTTTTTTCCTTTTCTGGTTGGTTACGTAAATGTAGAAGCTACCCAGGTCCTTGGAAAGTGCTTAGAAAAGTCAGAAACAAATTCGTCTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTCTAAACATTCTTCCATCATCTTAAGGGTACGTAACTACTCCACACTCGTATAACTCCTACTTTACAATCATCTCACCCACTACATTCTATCAATCTTTTTTTATTATTAGATCTTAAACAAAAGAGTATACTTGTAGTTTTAGTTTTCACCATTTTCTATGAAAGGAAAGATCAATTAAGCACCAATATTTTTAATTTACAATCATCAGCTTGACACTATACATTTATCAAAAGGTTAAACTTTCAACTCCCCTAAAATCATCATTTTTTTAAAAAAAAAAACAAAAGTAGGTAGGAATTCAAACCTTTAATTTTAAAAGAATAAGTACATGTGCTATTCGAAAATATATAAAGTTGTATTTTGTATTGAGCATTTTCTTTTCTTTCTTTTATAGGTCAATTATATTAGTTGGTATCCCCATTTATTTTCATGTGAAGAGGATGCTATGTTCCTTTCACATCAAAGTCTCTTATCTGGTAAAATGCTCCATATCGATATAATAATCTGTATATTCTTTTTCTAGATATTTAGCGTCCACAGAATTGACGATGAAATGCCTAAAAACTGAACATATTTAGGAACCCCTTTTTTTCACTTTATTTCAAGACCAAATTCACCTCATTTCAACGTGTTTTCCACTACCTATTTTCCAAAGATGAACCTATTAAGAAGAGTCTACTAGATTGTTAAAATTTTAAACACCAGAATGAAGATCAAATTAAACTTAATAAAATTTAAAACATACTTACAAATCCATAAATTGTTCAAAAGATTATTTGTTCCATAAACTGCAAATCCAC

mRNA sequence

GAAGTTTTGTTTGATTCCATTCCATAGAGACCTCTCGTTTGGAGGAAAGAATATCAATCATCAATACTCTCTCTCTCTCTCTCTTTCTCTTTTGCTTTCAATTTTCACTTCGAAGTTCAGCAGAAATGCATTTCTCCAACGCCAATTTTGCTTCTTCCTCTACCATTTCCACTGCGGTTCTTCCACTTCCTTCTCCAAAGCTTGCTTGTTTCAGGATTTCGCACCAGAAAACTCATCGGAGTTTCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAGAGTTTTGCCGCCGAGTTTGAGTAATCGTCAGAATAGCAATGCGTCGACTGATTTAGATGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCTGCTTTAAGAGACAACAAACAGTTGATGGAGATCGAATTTCCAACTGCTGGTCTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGCGATTGCTTCATAGATCCACTGAAAGCCACTCGCACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACGGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCTGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCCGTCCAAAACACTACTCGAAAACTCATAATATTCAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTATCCAAAGCTGGCGGCTCTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGAAGCTACCCAGGTCCTTGGAAAGTGCTTAGAAAAGTCAGAAACAAATTCGTCTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTCTAAACATTCTTCCATCATCTTAAGGGTACGTAACTACTCCACACTCGTATAACTCCTACTTTACAATCATCTCACCCACTACATTCTATCAATCTTTTTTTATTATTAGATCTTAAACAAAAGAGTATACTTGTAGTTTTAGTTTTCACCATTTTCTATGAAAGGAAAGATCAATTAAGCACCAATATTTTTAATTTACAATCATCAGCTTGACACTATACATTTATCAAAAGGTTAAACTTTCAACTCCCCTAAAATCATCATTTTTTTAAAAAAAAAAACAAAAGTAGGTAGGAATTCAAACCTTTAATTTTAAAAGAATAAGTACATGTGCTATTCGAAAATATATAAAGTTGTATTTTGTATTGAGCATTTTCTTTTCTTTCTTTTATAGGTCAATTATATTAGTTGGTATCCCCATTTATTTTCATGTGAAGAGGATGCTATGTTCCTTTCACATCAAAGTCTCTTATCTGGTAAAATGCTCCATATCGATATAATAATCTGTATATTCTTTTTCTAGATATTTAGCGTCCACAGAATTGACGATGAAATGCCTAAAAACTGAACATATTTAGGAACCCCTTTTTTTCACTTTATTTCAAGACCAAATTCACCTCATTTCAACGTGTTTTCCACTACCTATTTTCCAAAGATGAACCTATTAAGAAGAGTCTACTAGATTGTTAAAATTTTAAACACCAGAATGAAGATCAAATTAAACTTAATAAAATTTAAAACATACTTACAAATCCATAAATTGTTCAAAAGATTATTTGTTCCATAAACTGCAAATCCAC

Coding sequence (CDS)

ATGCATTTCTCCAACGCCAATTTTGCTTCTTCCTCTACCATTTCCACTGCGGTTCTTCCACTTCCTTCTCCAAAGCTTGCTTGTTTCAGGATTTCGCACCAGAAAACTCATCGGAGTTTCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGAAATCTTAGAGTTTTGCCGCCGAGTTTGAGTAATCGTCAGAATAGCAATGCGTCGACTGATTTAGATGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCTGCTTTAAGAGACAACAAACAGTTGATGGAGATCGAATTTCCAACTGCTGGTCTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGCGATTGCTTCATAGATCCACTGAAAGCCACTCGCACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACGGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCTGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCCGTCCAAAACACTACTCGAAAACTCATAATATTCAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTATCCAAAGCTGGCGGCTCTCATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTCAGAAGCTACCCAGGTCCTTGGAAAGTGCTTAGAAAAGTCAGAAACAAATTCGTCTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTCTAAACATTCTTCCATCATCTTAA

Protein sequence

MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

Homology

[Close]

BLAST of Pay0012829 vs. ExPASy Swiss-Prot
Match: Q8H0W0 (Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.6e-07
Identity = 71/294 (24.15%), Postives = 124/294 (42.18%), Query Frame = 0


Query: 62  SNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDG 121
           S   NS+    + +  P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  
Sbjct: 36  STSSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSS 95

Query: 122 EGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARN------TAFEGVSF 181
           +  I+  +  ++ ++R+     +     TR  + FP+  E + A         + +G+S 
Sbjct: 96  DDFIDANIQLAVTVVRK-----LQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISI 155

Query: 182 -KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEE 241
             LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+
Sbjct: 156 GSLDDIPGTSVTNFFRSIRSTLDFDFEDENE--GTWEPKEPPTLYIFINCSTRELSFIEK 215

Query: 242 LYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK 301
             +    +T    ++FN ELD +R+      F PK   L      +   V+YI   +  K
Sbjct: 216 FVETFASST--PALLFNLELDTLRADLGLLGFPPK--DLHYRFLSQFIPVFYIRTREYSK 275

Query: 302 -----------GGVLFRSYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL 324
                       G LFR YPGPW+V L++    F CV +     +L E    +L
Sbjct: 276 TVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELL 318

[Close]

BLAST of Pay0012829 vs. ExPASy TrEMBL
Match: A0A1S3BKQ4 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490732 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 3.9e-182
Identity = 321/326 (98.47%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHFSNANFASSSTISTAVLPL SP+LACFRISH+KTHRSFVSSSMFEFMPRRNLRVLPPS
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NK  CVHQQEEMPSLKEVALNILPSS
Sbjct: 301 NKLACVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of Pay0012829 vs. ExPASy TrEMBL
Match: A0A0A0L151 (DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G006620 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 316/326 (96.93%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHF NANFASSSTI+TAVLPLPSPKLACFRISH++THRS VSSSMFEFMPRR+LRVLPP+
Sbjct: 1   MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPN 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NKFVCVHQQEEMPSLKEVALNILPSS
Sbjct: 301 NKFVCVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of Pay0012829 vs. ExPASy TrEMBL
Match: A0A1S3BK29 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490732 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 321/337 (95.25%), Postives = 323/337 (95.85%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHFSNANFASSSTISTAVLPL SP+LACFRISH+KTHRSFVSSSMFEFMPRRNLRVLPPS
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGV 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGV
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSCSKEKHIQFFPEANEVKFARNTAFEGV 180

Query: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240
           SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN
Sbjct: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240

Query: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY 300
           TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY
Sbjct: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY 300

Query: 301 PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS 327
           PGPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Sbjct: 301 PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS 337

[Close]

BLAST of Pay0012829 vs. ExPASy TrEMBL
Match: A0A6J1E988 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431057 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.2e-164
Identity = 293/326 (89.88%), Postives = 304/326 (93.25%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           M+FSNANF SSSTI  AVLPLPS   ACFR+SH+K HRS +SSS+ EFM  RNLRVL  S
Sbjct: 1   MYFSNANFVSSSTIPAAVLPLPSRNYACFRMSHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNR++S+ STD DVPFPRDY DLL+QAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  -SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVANTARKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NKFVCVHQQ++MPSLKEVALNILPSS
Sbjct: 301 NKFVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of Pay0012829 vs. ExPASy TrEMBL
Match: A0A6J1HNL5 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465233 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.5e-162
Identity = 291/326 (89.26%), Postives = 302/326 (92.64%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           M+FSNA F SSSTI  AVLPLPS   ACFR+ H+K HRS +SSS+ EFM  RNLRVL  S
Sbjct: 1   MYFSNAKFVSSSTIPAAVLPLPSRNYACFRMCHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNR++S+ STD DVPFPRDY DLL+QAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  -SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVANTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NK VCVHQQ++MPSLKEVALNILPSS
Sbjct: 301 NKLVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of Pay0012829 vs. NCBI nr
Match: XP_008448609.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 647.1 bits (1668), Expect = 8.0e-182
Identity = 321/326 (98.47%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHFSNANFASSSTISTAVLPL SP+LACFRISH+KTHRSFVSSSMFEFMPRRNLRVLPPS
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NK  CVHQQEEMPSLKEVALNILPSS
Sbjct: 301 NKLACVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of Pay0012829 vs. NCBI nr
Match: KAE8650015.1 (hypothetical protein Csa_009730 [Cucumis sativus])

HSP 1 Score: 638.6 bits (1646), Expect = 2.8e-179
Identity = 316/326 (96.93%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHF NANFASSSTI+TAVLPLPSPKLACFRISH++THRS VSSSMFEFMPRR+LRVLPP+
Sbjct: 50  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPN 109

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNKQLMEIEFPTAGLESVPGDGE
Sbjct: 110 LSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 169

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 170 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 229

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 230 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 289

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Sbjct: 290 LDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 349

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NKFVCVHQQEEMPSLKEVALNILPSS
Sbjct: 350 NKFVCVHQQEEMPSLKEVALNILPSS 375

[Close]

BLAST of Pay0012829 vs. NCBI nr
Match: XP_008448608.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 638.6 bits (1646), Expect = 2.8e-179
Identity = 321/337 (95.25%), Postives = 323/337 (95.85%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHFSNANFASSSTISTAVLPL SP+LACFRISH+KTHRSFVSSSMFEFMPRRNLRVLPPS
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGV 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGV
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSCSKEKHIQFFPEANEVKFARNTAFEGV 180

Query: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240
           SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN
Sbjct: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240

Query: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY 300
           TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY
Sbjct: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY 300

Query: 301 PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS 327
           PGPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Sbjct: 301 PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS 337

[Close]

BLAST of Pay0012829 vs. NCBI nr
Match: XP_031738157.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 630.6 bits (1625), Expect = 7.7e-177
Identity = 316/336 (94.05%), Postives = 323/336 (96.13%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHF NANFASSSTI+TAVLPLPSPKLACFRISH++THRS VSSSMFEFMPRR+LRVLPP+
Sbjct: 1   MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPN 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRV          FFPEANEVKFARNTAFEGVS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSIKENHIQFFPEANEVKFARNTAFEGVS 180

Query: 181 FKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNT 240
           FKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNT
Sbjct: 181 FKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNT 240

Query: 241 TRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYP 300
           TRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYP
Sbjct: 241 TRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYP 300

Query: 301 GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS 327
           GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
Sbjct: 301 GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS 336

[Close]

BLAST of Pay0012829 vs. NCBI nr
Match: XP_038877167.1 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 616.7 bits (1589), Expect = 1.2e-172
Identity = 308/326 (94.48%), Postives = 314/326 (96.32%), Query Frame = 0


Query: 1   MHFSNANFASSSTISTAVLPLPSPKLACFRISHQKTHRSFVSSSMFEFMPRRNLRVLPPS 60
           MHFSNANFASSS I TA+LPLPSP LACFRISH+KTHRSF+ SS+FEF  RRNLRV   S
Sbjct: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60

Query: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  -SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEEMPSLKEVALNILPSS 327
           NKFVCVHQQE+MPSLKEVALNILPSS
Sbjct: 301 NKFVCVHQQEDMPSLKEVALNILPSS 325

[Close]

BLAST of Pay0012829 vs. TAIR 10
Match: AT5G48790.1 (Domain of unknown function (DUF1995) )

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121
Identity = 213/275 (77.45%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 52  RNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAG 111
           RNL+    S+S   N+N S D +VPFPRDY +L+NQAK+A E AL+D KQLMEIEFPT+G
Sbjct: 43  RNLKFRACSVSGGYNNNTSVD-NVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFPTSG 102

Query: 112 LESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSF 171
           L SVPGDGEG  EMTES+ +IR+FCD  + P KA  TR+FFPEANEVKFA+ T F G  F
Sbjct: 103 LASVPGDGEGATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYF 162

Query: 172 KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTT 231
           KLDYLTKPS FEDFGF E+VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV NT 
Sbjct: 163 KLDYLTKPSLFEDFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTD 222

Query: 232 RKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPG 291
           RKLIIFNGELDRIRSGYYP FFYPKLAAL KTL PKMETVYYIHNFKGQKGGVLFR YPG
Sbjct: 223 RKLIIFNGELDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRCYPG 282

Query: 292 PWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS 327
           PW+VLR+ RNK++CVHQQE MPSLKEVAL+IL S+
Sbjct: 283 PWQVLRRTRNKYICVHQQESMPSLKEVALDILASA 316

[Close]

BLAST of Pay0012829 vs. TAIR 10
Match: AT1G73060.1 (Low PSII Accumulation 3 )

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-08
Identity = 71/294 (24.15%), Postives = 124/294 (42.18%), Query Frame = 0


Query: 62  SNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDG 121
           S   NS+    + +  P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  
Sbjct: 36  STSSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSS 95

Query: 122 EGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARN------TAFEGVSF 181
           +  I+  +  ++ ++R+     +     TR  + FP+  E + A         + +G+S 
Sbjct: 96  DDFIDANIQLAVTVVRK-----LQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISI 155

Query: 182 -KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEE 241
             LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+
Sbjct: 156 GSLDDIPGTSVTNFFRSIRSTLDFDFEDENE--GTWEPKEPPTLYIFINCSTRELSFIEK 215

Query: 242 LYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQK 301
             +    +T    ++FN ELD +R+      F PK   L      +   V+YI   +  K
Sbjct: 216 FVETFASST--PALLFNLELDTLRADLGLLGFPPK--DLHYRFLSQFIPVFYIRTREYSK 275

Query: 302 -----------GGVLFRSYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL 324
                       G LFR YPGPW+V L++    F CV +     +L E    +L
Sbjct: 276 TVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELL 318

The following BLAST results are available for this feature:

BLAST of Pay0012829 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0W0	4.6e-07	24.15	Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1	[more]

BLAST of Pay0012829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BKQ4	3.9e-182	98.47	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 OS=Cucumis melo OX=365...	[more]
A0A0A0L151	1.4e-179	96.93	DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G006620 PE=...	[more]
A0A1S3BK29	1.4e-179	95.25	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Cucumis melo OX=365...	[more]
A0A6J1E988	6.2e-164	89.88	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HNL5	1.5e-162	89.26	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Pay0012829 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448609.1	8.0e-182	98.47	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis me...	[more]
KAE8650015.1	2.8e-179	96.93	hypothetical protein Csa_009730 [Cucumis sativus]	[more]
XP_008448608.1	2.8e-179	95.25	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis me...	[more]
XP_031738157.1	7.7e-177	94.05	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]	[more]
XP_038877167.1	1.2e-172	94.48	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida]	[more]

BLAST of Pay0012829 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48790.1	1.7e-121	77.45	Domain of unknown function (DUF1995)	[more]
AT1G73060.1	3.3e-08	24.15	Low PSII Accumulation 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018962	Domain of unknown function DUF1995	PFAM	PF09353	DUF1995	coord: 78..319 e-value: 3.4E-48 score: 164.3
IPR044687	Protein LOW PSII ACCUMULATION 3	PANTHER	PTHR34051	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 1..325
None	No IPR available	PANTHER	PTHR34051:SF1	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC ISOFORM X1	coord: 1..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012829.2	Pay0012829.2	mRNA