Pay0012499 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012499
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr01: 11572216 .. 11573037 (-)
RNA-Seq Expression	Pay0012499
Synteny	Pay0012499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCTACTGGCAGTGATGAGGATAGATCTTTCTATAAAACTTGGGAAAGATCAAATAAATTGAGCTTAATGTTTATGCGAATGACGATAGCAAACAATATTAAGTCCATAATTAAGAAAACTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCAGAGTCGGCTGACAAGTCACTTGCTGGAATACTTATGAATACTTTAACCAACATCAAGTTTGATGGTTCTCGTACTATACATGAGCATATCCTTGAAATGACGAACTTGATAGCAAGGTTAAAGACCATGGGAATAGAAGTTAATGAGAATTTTTCGGTAACATTTATCCTTAATTTCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACACTCTGAAAGATAAATGGAATGCGCATGAATTACAAAGTATGCTCATTCAAGAGGAAGCGAGACTTAAGAAACCAATAATTCACTCTGCCAATCTCATGGGTCACAAAGGAGCTGGAAAGAAACCTGGAAAAAAAGAATGGCAAGGGCAACCATGGACAATTAAAGGTAAAAAAATCATCTGTCCTAATCCACAAAAAAGGATAAATTAAGGATAAGTGTCGTTTTTGCAACAAACCCAGACACTATCAGAAAGATTGTCTAAAACGTAAGGCATGGTTCAAGAATAAAGGTAAGCATAATGCTTTAGTATGTTTCAAATCAAACTTAACTGAAGTTCCTTACAATACATGGTGGATTGATTCTAGTTGTACCATTCATGTTTCCAATACAATGCAGGGATTCCTTACGACCCAAACCACAAACCCAAATGA

mRNA sequence

ATGATTTCTACTGGCAGTGATGAGGATAGATCTTTCTATAAAACTTGGGAAAGATCAAATAAATTGAGCTTAATGTTTATGCGAATGACGATAGCAAACAATATTAAGTCCATAATTAAGAAAACTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCAGAGTCGGCTGACAAGTCACTTGCTGGAATACTTATGAATACTTTAACCAACATCAAGTTTGATGGTTCTCGTACTATACATGAGCATATCCTTGAAATGACGAACTTGATAGCAAGGTTAAAGACCATGGGAATAGAAGTTAATGAGAATTTTTCGGTAACATTTATCCTTAATTTCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACACTCTGAAAGATAAATGGAATGCGCATGAATTACAAAGTATGCTCATTCAAGAGGAAGCGAGACTTAAGAAACCAATAATTCACTCTGCCAATCTCATGGGTCACAAAGGAGATAAGTGTCGTTTTTGCAACAAACCCAGACACTATCAGAAAGATTGTCTAAAACGTAAGGCATGGTTCAAGAATAAAGGGATTCCTTACGACCCAAACCACAAACCCAAATGA

Coding sequence (CDS)

ATGATTTCTACTGGCAGTGATGAGGATAGATCTTTCTATAAAACTTGGGAAAGATCAAATAAATTGAGCTTAATGTTTATGCGAATGACGATAGCAAACAATATTAAGTCCATAATTAAGAAAACTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCAGAGTCGGCTGACAAGTCACTTGCTGGAATACTTATGAATACTTTAACCAACATCAAGTTTGATGGTTCTCGTACTATACATGAGCATATCCTTGAAATGACGAACTTGATAGCAAGGTTAAAGACCATGGGAATAGAAGTTAATGAGAATTTTTCGGTAACATTTATCCTTAATTTCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACACTCTGAAAGATAAATGGAATGCGCATGAATTACAAAGTATGCTCATTCAAGAGGAAGCGAGACTTAAGAAACCAATAATTCACTCTGCCAATCTCATGGGTCACAAAGGAGATAAGTGTCGTTTTTGCAACAAACCCAGACACTATCAGAAAGATTGTCTAAAACGTAAGGCATGGTTCAAGAATAAAGGGATTCCTTACGACCCAAACCACAAACCCAAATGA

Protein sequence

MISTGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESADKSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEYGPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKGDKCRFCNKPRHYQKDCLKRKAWFKNKGIPYDPNHKPK

Homology

[Close]

BLAST of Pay0012499 vs. ExPASy TrEMBL
Match: A0A5A7TD98 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G001010 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 174/225 (77.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK WERSN+LSLMFMRMT+ANNIKS IK TEDAKEFMKSVEKCSQSESAD
Sbjct: 50  SASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSESAD 109

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLAG LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF VTFILN LPS+Y
Sbjct: 110 KSLAGTLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPSKY 169

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHSANLMGHKG               
Sbjct: 170 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSANLMGHKGAGKKPGKKNGKGNHG 229

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKC FCNKP HYQKDCLKRKAWF+NKG
Sbjct: 230 QLKVKQSSAPIHKKGQIKDKCHFCNKPGHYQKDCLKRKAWFENKG 274

[Close]

BLAST of Pay0012499 vs. ExPASy TrEMBL
Match: A0A5A7T3G8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001440 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 174/225 (77.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SD+DRSFYK WERSN+LSLMFMRMT+ANNIKSIIK TEDAKEFMKSVEKCSQSESAD
Sbjct: 63  SASSDKDRSFYKAWERSNRLSLMFMRMTVANNIKSIIKNTEDAKEFMKSVEKCSQSESAD 122

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLAG LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF V FILN LPSEY
Sbjct: 123 KSLAGTLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVMFILNSLPSEY 182

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHSANLM HKG               
Sbjct: 183 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSANLMSHKGIGKKPGKKNGKGNHG 242

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKCRFCNKP HYQKDCLKRKAWF+NKG
Sbjct: 243 QLKVKQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKG 287

[Close]

BLAST of Pay0012499 vs. ExPASy TrEMBL
Match: A0A5A7TTF5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001050 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.0e-88
Identity = 171/225 (76.00%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK W+RSN+LSLMFM+MT+ANNIKS IK TEDAKEFMKSVEKCSQSESAD
Sbjct: 63  SASSDEDRSFYKAWKRSNRLSLMFMQMTVANNIKSTIKNTEDAKEFMKSVEKCSQSESAD 122

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSL G LM+TLTNIKFDGSRTIHEHILE+TNL ARLKTMG+EVNENF VTFILN LPSEY
Sbjct: 123 KSLVGTLMSTLTNIKFDGSRTIHEHILEITNLAARLKTMGMEVNENFLVTFILNSLPSEY 182

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHS NLMGHKG               
Sbjct: 183 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSTNLMGHKGARKKPGKKNGKGNHG 242

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKCRFCNKP HYQKDCLKRKAWF+NKG
Sbjct: 243 QLKVKQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKG 287

[Close]

BLAST of Pay0012499 vs. ExPASy TrEMBL
Match: A0A5D3BWW5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00300 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 170/224 (75.89%), Postives = 177/224 (79.02%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK WERSN+LSLMF+RMT+ANNIK  IK TEDAKEFMKSV+KC QSESAD
Sbjct: 63  SANSDEDRSFYKAWERSNRLSLMFIRMTVANNIKFTIKNTEDAKEFMKSVKKCFQSESAD 122

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLAG LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF VTFILN LPSEY
Sbjct: 123 KSLAGTLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPSEY 182

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHS NLMGHKG               
Sbjct: 183 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSVNLMGHKGAGKKPGKKNGKGNHG 242

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNK 194
                             DKCRFCNKP HYQKDCLKRKAWF+NK
Sbjct: 243 QLKVKQSSAPIHKKGEIKDKCRFCNKPGHYQKDCLKRKAWFENK 286

[Close]

BLAST of Pay0012499 vs. ExPASy TrEMBL
Match: A0A5D3BPH8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00030 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.8e-87
Identity = 170/225 (75.56%), Postives = 177/225 (78.67%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK WERSN+LSLMFMRMT+ANNIKS IK TEDAKEFMKSVEKCSQSES D
Sbjct: 65  SASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSESFD 124

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLA  LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF VTFILN LP +Y
Sbjct: 125 KSLAATLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPLKY 184

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFH+NYN LKDKWN HELQSMLIQEEARLKKPIIHSANLMGHKG               
Sbjct: 185 GPFHINYNALKDKWNVHELQSMLIQEEARLKKPIIHSANLMGHKGAGKKSGKKNGKGNHG 244

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKCRFCNKP HYQKDCLKRKAWF+NKG
Sbjct: 245 QLKVKQSSAPIHKKEQIKDKCRFCNKPGHYQKDCLKRKAWFENKG 289

[Close]

BLAST of Pay0012499 vs. NCBI nr
Match: KAA0041280.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK16079.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.2e-89
Identity = 174/225 (77.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK WERSN+LSLMFMRMT+ANNIKS IK TEDAKEFMKSVEKCSQSESAD
Sbjct: 50  SASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSESAD 109

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLAG LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF VTFILN LPS+Y
Sbjct: 110 KSLAGTLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPSKY 169

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHSANLMGHKG               
Sbjct: 170 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSANLMGHKGAGKKPGKKNGKGNHG 229

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKC FCNKP HYQKDCLKRKAWF+NKG
Sbjct: 230 QLKVKQSSAPIHKKGQIKDKCHFCNKPGHYQKDCLKRKAWFENKG 274

[Close]

BLAST of Pay0012499 vs. NCBI nr
Match: KAA0035949.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 174/225 (77.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SD+DRSFYK WERSN+LSLMFMRMT+ANNIKSIIK TEDAKEFMKSVEKCSQSESAD
Sbjct: 63  SASSDKDRSFYKAWERSNRLSLMFMRMTVANNIKSIIKNTEDAKEFMKSVEKCSQSESAD 122

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLAG LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF V FILN LPSEY
Sbjct: 123 KSLAGTLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVMFILNSLPSEY 182

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHSANLM HKG               
Sbjct: 183 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSANLMSHKGIGKKPGKKNGKGNHG 242

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKCRFCNKP HYQKDCLKRKAWF+NKG
Sbjct: 243 QLKVKQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKG 287

[Close]

BLAST of Pay0012499 vs. NCBI nr
Match: KAA0046843.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK04491.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 335.1 bits (858), Expect = 4.2e-88
Identity = 171/225 (76.00%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK W+RSN+LSLMFM+MT+ANNIKS IK TEDAKEFMKSVEKCSQSESAD
Sbjct: 63  SASSDEDRSFYKAWKRSNRLSLMFMQMTVANNIKSTIKNTEDAKEFMKSVEKCSQSESAD 122

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSL G LM+TLTNIKFDGSRTIHEHILE+TNL ARLKTMG+EVNENF VTFILN LPSEY
Sbjct: 123 KSLVGTLMSTLTNIKFDGSRTIHEHILEITNLAARLKTMGMEVNENFLVTFILNSLPSEY 182

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHS NLMGHKG               
Sbjct: 183 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSTNLMGHKGARKKPGKKNGKGNHG 242

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKCRFCNKP HYQKDCLKRKAWF+NKG
Sbjct: 243 QLKVKQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKG 287

[Close]

BLAST of Pay0012499 vs. NCBI nr
Match: TYK04201.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 6.1e-87
Identity = 170/224 (75.89%), Postives = 177/224 (79.02%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK WERSN+LSLMF+RMT+ANNIK  IK TEDAKEFMKSV+KC QSESAD
Sbjct: 63  SANSDEDRSFYKAWERSNRLSLMFIRMTVANNIKFTIKNTEDAKEFMKSVKKCFQSESAD 122

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLAG LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF VTFILN LPSEY
Sbjct: 123 KSLAGTLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPSEY 182

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFHMNYNTLKDKWN HELQSMLIQEEARLKKPIIHS NLMGHKG               
Sbjct: 183 GPFHMNYNTLKDKWNVHELQSMLIQEEARLKKPIIHSVNLMGHKGAGKKPGKKNGKGNHG 242

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNK 194
                             DKCRFCNKP HYQKDCLKRKAWF+NK
Sbjct: 243 QLKVKQSSAPIHKKGEIKDKCRFCNKPGHYQKDCLKRKAWFENK 286

[Close]

BLAST of Pay0012499 vs. NCBI nr
Match: KAA0039623.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK01681.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 330.9 bits (847), Expect = 7.9e-87
Identity = 170/225 (75.56%), Postives = 177/225 (78.67%), Query Frame = 0


Query: 3   STGSDEDRSFYKTWERSNKLSLMFMRMTIANNIKSIIKKTEDAKEFMKSVEKCSQSESAD 62
           S  SDEDRSFYK WERSN+LSLMFMRMT+ANNIKS IK TEDAKEFMKSVEKCSQSES D
Sbjct: 65  SASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSESFD 124

Query: 63  KSLAGILMNTLTNIKFDGSRTIHEHILEMTNLIARLKTMGIEVNENFSVTFILNFLPSEY 122
           KSLA  LM+TLTNIKFDGSRTIHEHILEMTNL ARLKTMG+EVNENF VTFILN LP +Y
Sbjct: 125 KSLAATLMSTLTNIKFDGSRTIHEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPLKY 184

Query: 123 GPFHMNYNTLKDKWNAHELQSMLIQEEARLKKPIIHSANLMGHKG--------------- 182
           GPFH+NYN LKDKWN HELQSMLIQEEARLKKPIIHSANLMGHKG               
Sbjct: 185 GPFHINYNALKDKWNVHELQSMLIQEEARLKKPIIHSANLMGHKGAGKKSGKKNGKGNHG 244

Query: 183 ------------------DKCRFCNKPRHYQKDCLKRKAWFKNKG 195
                             DKCRFCNKP HYQKDCLKRKAWF+NKG
Sbjct: 245 QLKVKQSSAPIHKKEQIKDKCRFCNKPGHYQKDCLKRKAWFENKG 289

The following BLAST results are available for this feature:

BLAST of Pay0012499 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TD98	1.1e-89	77.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T3G8	1.8e-89	77.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TTF5	2.0e-88	76.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BWW5	2.9e-87	75.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BPH8	3.8e-87	75.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Pay0012499 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041280.1	2.2e-89	77.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0035949.1	3.8e-89	77.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0046843.1	4.2e-88	76.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04201.1	6.1e-87	75.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0039623.1	7.9e-87	75.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Pay0012499 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 16..154 e-value: 3.0E-17 score: 62.7
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 3..177
None	No IPR available	PANTHER	PTHR35317:SF10	ZINC FINGER, CCHC-TYPE-RELATED	coord: 3..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012499.1	Pay0012499.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding