Pay0012257 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012257
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	nuclear pore complex protein NUP50A-like
Location	chr01: 34687611 .. 34689011 (-)
RNA-Seq Expression	Pay0012257
Synteny	Pay0012257

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCCTGACGATGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTTCTAGCCACAAGAAGAATTGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCTTTTGCGGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTCAACACGATACAGAGGCAGCTGATGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAGTGACTCAAAAAGATGGGGACCATAGTGATGAGCCAGTCAAATGTAAAATTGACACATCAGAGGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTTAAGCGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTTTGAAAGCAATAAGATTGAAAATGAAGAACCAGCGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGTAAGTTGTGATAAGAATGAAGACGAGGTTCCTGCAAGAGGTGATAAGAATGAAAATGAAGAACCCAGTGAAGGAAATGAGATACAAAATAAGGAAACTGGGGAACAAGAAAAAACAGAAAATGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCGAGCAGCCAGAATGCCTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTCGGTAACATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCCGCCCTCTTTGGTACTTCAGGTTCTTCCACTGTTTCCAAGAGTGAGAGAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATTGATGGATCGTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTCCCTACTAGTGGGACCGGCAGAGGGAGGATTCTTATGAGAGCCAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGATATGAAGCTCACAAACATGGACAAGAGAGGAATCACCTTTGCCTGCATGAACAGCACCATCGATGGGAAGGATGGTCTCTCAACCTTTGGTGTGAAGTTCAAGGATGTATCCATAGTTGAAGAGTTTCGAGCAGCAGTTACTGAACATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACACCTGAGAATTCTCCTTAA

mRNA sequence

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCCTGACGATGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTTCTAGCCACAAGAAGAATTGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCTTTTGCGGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTCAACACGATACAGAGGCAGCTGATGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAGTGACTCAAAAAGATGGGGACCATAGTGATGAGCCAGTCAAATGTAAAATTGACACATCAGAGGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTTAAGCGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTTTGAAAGCAATAAGATTGAAAATGAAGAACCAGCGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGTAAGTTGTGATAAGAATGAAGACGAGGTTCCTGCAAGAGGTGATAAGAATGAAAATGAAGAACCCAGTGAAGGAAATGAGATACAAAATAAGGAAACTGGGGAACAAGAAAAAACAGAAAATGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCGAGCAGCCAGAATGCCTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTCGGTAACATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCCGCCCTCTTTGGTACTTCAGGTTCTTCCACTGTTTCCAAGAGTGAGAGAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATTGATGGATCGTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTCCCTACTAGTGGGACCGGCAGAGGGAGGATTCTTATGAGAGCCAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGATATGAAGCTCACAAACATGGACAAGAGAGGAATCACCTTTGCCTGCATGAACAGCACCATCGATGGGAAGGATGGTCTCTCAACCTTTGGTGTGAAGTTCAAGGATGTATCCATAGTTGAAGAGTTTCGAGCAGCAGTTACTGAACATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACACCTGAGAATTCTCCTTAA

Coding sequence (CDS)

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCCTGACGATGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTTCTAGCCACAAGAAGAATTGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCTTTTGCGGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTCAACACGATACAGAGGCAGCTGATGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAGTGACTCAAAAAGATGGGGACCATAGTGATGAGCCAGTCAAATGTAAAATTGACACATCAGAGGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTTAAGCGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTTTGAAAGCAATAAGATTGAAAATGAAGAACCAGCGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGTAAGTTGTGATAAGAATGAAGACGAGGTTCCTGCAAGAGGTGATAAGAATGAAAATGAAGAACCCAGTGAAGGAAATGAGATACAAAATAAGGAAACTGGGGAACAAGAAAAAACAGAAAATGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCGAGCAGCCAGAATGCCTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTCGGTAACATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCCGCCCTCTTTGGTACTTCAGGTTCTTCCACTGTTTCCAAGAGTGAGAGAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATTGATGGATCGTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTCCCTACTAGTGGGACCGGCAGAGGGAGGATTCTTATGAGAGCCAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGATATGAAGCTCACAAACATGGACAAGAGAGGAATCACCTTTGCCTGCATGAACAGCACCATCGATGGGAAGGATGGTCTCTCAACCTTTGGTGTGAAGTTCAAGGATGTATCCATAGTTGAAGAGTTTCGAGCAGCAGTTACTGAACATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACACCTGAGAATTCTCCTTAA

Protein sequence

MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGSTASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDHSDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKTGNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP

Homology

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BLAST of Pay0012257 vs. ExPASy Swiss-Prot
Match: Q9C829 (Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE=1 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 3.3e-83
Identity = 217/480 (45.21%), Postives = 293/480 (61.04%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPG DDD+D +E E+GTFK+AS+EVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  STASAP--SSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKD 120
             ++AP  +SNPFAGI+LVP T  + +   V  +   A+ K    EA  +D       ++
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTTAPAST--PVGTNAPLAESKLAPAEAVVEDNQKASDIEE 120

Query: 121 GDHSDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGG 180
           GD  D     K+D  +A      +  D++     +SA  +V                   
Sbjct: 121 GDEVDSK---KVDVKDAVGEETEKTKDKDDNHCGKSADVQV------------------- 180

Query: 181 DKTGNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKT 240
                          +E  + VSCD N       G  ++ + P E      K++G  +  
Sbjct: 181 -------------AATEVAQMVSCDTNVCNNAVEG-TDQTDFPLE------KDSGGDQAE 240

Query: 241 ENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKD---GV 300
           + E+      E + + +    +SFQQ SS++NAFTGLA T  S S+FSFG + +D   G 
Sbjct: 241 KKEKEGNGIEEADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLVSQDGSTGT 300

Query: 301 GLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFE 360
           G    FGL ++ SS++FG +GSS + KSE SGFP  QEV+ ETGEENEKV F+ADSI+FE
Sbjct: 301 GSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAFSADSIMFE 360

Query: 361 FIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITF 420
           ++DG WKERGKGELKVNV +S  G+ R++MRA+GNYRLILNASLYP+MKL NMDK+GITF
Sbjct: 361 YLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKGITF 420

Query: 421 ACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK--------GKASSTVLKTPENSP 467
           AC+NS  +GK+GLSTF +KFKD +IVEEFR A+ +HK         + S+  LKTPENSP
Sbjct: 421 ACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPENSP 435

[Close]

BLAST of Pay0012257 vs. ExPASy Swiss-Prot
Match: Q9LW88 (Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.0e-79
Identity = 213/484 (44.01%), Postives = 287/484 (59.30%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPG-PDDDEDVSEQETGTFKRASEEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPG  DDDED S  E+GTF  AS+EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  --GSTASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQK 120
              S  + P+SNPF GIRLVP T  + S A  +     +   AG  E           + 
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLS---AGKQETLADGRSDATKET 120

Query: 121 DGDHSDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAG 180
           DGD  +     K D  +A    + Q  D+ S    +     + D    E ++  N    G
Sbjct: 121 DGDSKE-----KSDAIDAVGKQETQG-DEISAKTKD-----IIDGGEKEMSEAVNSVEGG 180

Query: 181 GDKTGNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEK 240
           G    NE+       E +          E+ V    D N N    EG++   K+TG  + 
Sbjct: 181 GAVNKNED-------EIKTTMVTEVAAGEETVK---DDNNNSNTVEGSDCVVKDTGGNQT 240

Query: 241 TENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDG--- 300
            +  +  +   + E + ++  L+SF Q SSS+NAFTGLA TGFS S+FSFG +P++G   
Sbjct: 241 EKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTG 300

Query: 301 ---VGLTTSFGLSNNGSSALFGTSGSSTV---SKSERSGFPSMQEVAVETGEENEKVVFN 360
                 + SFG +NNG+S+LFG S ++++   S    + FPS Q+V+VETGEENEK  F 
Sbjct: 301 SGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFT 360

Query: 361 ADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNM 420
           ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL LNASLYP+MKL  M
Sbjct: 361 ADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKM 420

Query: 421 DKRGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTV-----LKTP 467
           DK+GITFAC+NS  D KDGLST  +KFKD ++VEEFRA + EHK    S       LKTP
Sbjct: 421 DKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTP 460

[Close]

BLAST of Pay0012257 vs. ExPASy Swiss-Prot
Match: A0A0B4K7J2 (E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.0e-12
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 328  PSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRAR 387
            P   EV V TGEE E + F + + LF ++D  WKERG G +K+ +    TG  R+LMR  
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1374

Query: 388  GNYRLILNASLYPDMKLT----NMDKRGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEF 447
              +++  N ++  D+ +     + DK+ + +A  N   D +  L  F V+FK   + EEF
Sbjct: 1375 QTHKVCANHTITADITINVANQDKDKKSLLWAA-NDFADEQVTLERFLVRFKTGELAEEF 1434

Query: 448  RAAVTEHKGKASS 457
            R A T+    A S
Sbjct: 1435 RVAFTKASEAAKS 1445

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BLAST of Pay0012257 vs. ExPASy Swiss-Prot
Match: Q86VV4 (Ran-binding protein 3-like OS=Homo sapiens OX=9606 GN=RANBP3L PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 7.3e-06
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 286 FGNIPKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVV 345
           F +IPK  V   +S   S   +S +     S+    S+ S    ++++ V TGEE E  V
Sbjct: 244 FKSIPKFPVNFLSSRTDSIKNTSLI----ESAAAFSSQPSRKCLLEKIDVITGEETEHNV 303

Query: 346 FNADSILFEF--IDGSWKERGKGELKVNVPTS---GTGRGRILMRARGNYRLILNASLYP 405
              +  LF F     SW ERG+G L++N   S   GT + R++MR +G+ RLILN+ L+ 
Sbjct: 304 LKINCKLFIFNKTTQSWIERGRGTLRLNDTASTDCGTLQSRLIMRNQGSLRLILNSKLWA 363

Query: 406 DMKLTNMDKRGI 413
            MK+   + + +
Sbjct: 364 QMKIQRANHKNV 371

[Close]

BLAST of Pay0012257 vs. ExPASy TrEMBL
Match: A0A1S4E3Q0 (nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 4.4e-248
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 467
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Pay0012257 vs. ExPASy TrEMBL
Match: A0A5D3BX12 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002470 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 4.4e-248
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 467
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 494

[Close]

BLAST of Pay0012257 vs. ExPASy TrEMBL
Match: A0A1S3CHQ9 (nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 7.6e-240
Identity = 453/457 (99.12%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASST 458
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S T
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKVGVSIT 457

[Close]

BLAST of Pay0012257 vs. ExPASy TrEMBL
Match: A0A5A7UW04 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00030 PE=4 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 9.9e-240
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 452
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of Pay0012257 vs. ExPASy TrEMBL
Match: A0A0A0KAD0 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 1.6e-229
Identity = 440/466 (94.42%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 467
            DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Pay0012257 vs. NCBI nr
Match: TYK04047.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 866.7 bits (2238), Expect = 9.2e-248
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 467
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 494

[Close]

BLAST of Pay0012257 vs. NCBI nr
Match: XP_008462135.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008462136.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_016902854.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo])

HSP 1 Score: 866.7 bits (2238), Expect = 9.2e-248
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 467
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Pay0012257 vs. NCBI nr
Match: XP_008462138.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo])

HSP 1 Score: 839.3 bits (2167), Expect = 1.6e-239
Identity = 453/457 (99.12%), Postives = 453/457 (99.12%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASST 458
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S T
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKVGVSIT 457

[Close]

BLAST of Pay0012257 vs. NCBI nr
Match: KAA0059280.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 839.0 bits (2166), Expect = 2.0e-239
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 452
           IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of Pay0012257 vs. NCBI nr
Match: XP_011659558.1 (nuclear pore complex protein NUP50A [Cucumis sativus] >KGN45347.1 hypothetical protein Csa_016470 [Cucumis sativus])

HSP 1 Score: 805.1 bits (2078), Expect = 3.3e-229
Identity = 440/466 (94.42%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 467
            DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Pay0012257 vs. TAIR 10
Match: AT1G52380.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 310.5 bits (794), Expect = 2.4e-84
Identity = 217/480 (45.21%), Postives = 293/480 (61.04%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPG DDD+D +E E+GTFK+AS+EVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  STASAP--SSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKD 120
             ++AP  +SNPFAGI+LVP T  + +   V  +   A+ K    EA  +D       ++
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTTAPAST--PVGTNAPLAESKLAPAEAVVEDNQKASDIEE 120

Query: 121 GDHSDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGG 180
           GD  D     K+D  +A      +  D++     +SA  +V                   
Sbjct: 121 GDEVDSK---KVDVKDAVGEETEKTKDKDDNHCGKSADVQV------------------- 180

Query: 181 DKTGNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKT 240
                          +E  + VSCD N       G  ++ + P E      K++G  +  
Sbjct: 181 -------------AATEVAQMVSCDTNVCNNAVEG-TDQTDFPLE------KDSGGDQAE 240

Query: 241 ENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKD---GV 300
           + E+      E + + +    +SFQQ SS++NAFTGLA T  S S+FSFG + +D   G 
Sbjct: 241 KKEKEGNGIEEADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLVSQDGSTGT 300

Query: 301 GLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFE 360
           G    FGL ++ SS++FG +GSS + KSE SGFP  QEV+ ETGEENEKV F+ADSI+FE
Sbjct: 301 GSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAFSADSIMFE 360

Query: 361 FIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITF 420
           ++DG WKERGKGELKVNV +S  G+ R++MRA+GNYRLILNASLYP+MKL NMDK+GITF
Sbjct: 361 YLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKGITF 420

Query: 421 ACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK--------GKASSTVLKTPENSP 467
           AC+NS  +GK+GLSTF +KFKD +IVEEFR A+ +HK         + S+  LKTPENSP
Sbjct: 421 ACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPENSP 435

[Close]

BLAST of Pay0012257 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 296.6 bits (758), Expect = 3.5e-80
Identity = 213/484 (44.01%), Postives = 287/484 (59.30%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPG-PDDDEDVSEQETGTFKRASEEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPG  DDDED S  E+GTF  AS+EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  --GSTASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQK 120
              S  + P+SNPF GIRLVP T  + S A  +     +   AG  E           + 
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLS---AGKQETLADGRSDATKET 120

Query: 121 DGDHSDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAG 180
           DGD  +     K D  +A    + Q  D+ S    +     + D    E ++  N    G
Sbjct: 121 DGDSKE-----KSDAIDAVGKQETQG-DEISAKTKD-----IIDGGEKEMSEAVNSVEGG 180

Query: 181 GDKTGNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEK 240
           G    NE+       E +          E+ V    D N N    EG++   K+TG  + 
Sbjct: 181 GAVNKNED-------EIKTTMVTEVAAGEETVK---DDNNNSNTVEGSDCVVKDTGGNQT 240

Query: 241 TENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDG--- 300
            +  +  +   + E + ++  L+SF Q SSS+NAFTGLA TGFS S+FSFG +P++G   
Sbjct: 241 EKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTG 300

Query: 301 ---VGLTTSFGLSNNGSSALFGTSGSSTV---SKSERSGFPSMQEVAVETGEENEKVVFN 360
                 + SFG +NNG+S+LFG S ++++   S    + FPS Q+V+VETGEENEK  F 
Sbjct: 301 SGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFT 360

Query: 361 ADSILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNM 420
           ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL LNASLYP+MKL  M
Sbjct: 361 ADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKM 420

Query: 421 DKRGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTV-----LKTP 467
           DK+GITFAC+NS  D KDGLST  +KFKD ++VEEFRA + EHK    S       LKTP
Sbjct: 421 DKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTP 460

The following BLAST results are available for this feature:

BLAST of Pay0012257 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C829	3.3e-83	45.21	Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE...	[more]
Q9LW88	5.0e-79	44.01	Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE...	[more]
A0A0B4K7J2	4.0e-12	34.59	E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 ...	[more]
Q86VV4	7.3e-06	33.33	Ran-binding protein 3-like OS=Homo sapiens OX=9606 GN=RANBP3L PE=1 SV=2	[more]

BLAST of Pay0012257 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3Q0	4.4e-248	100.00	nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3BX12	4.4e-248	100.00	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CHQ9	7.6e-240	99.12	nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UW04	9.9e-240	100.00	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KAD0	1.6e-229	94.42	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4...	[more]

BLAST of Pay0012257 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04047.1	9.2e-248	100.00	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008462135.1	9.2e-248	100.00	PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008...	[more]
XP_008462138.1	1.6e-239	99.12	PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo]	[more]
KAA0059280.1	2.0e-239	100.00	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011659558.1	3.3e-229	94.42	nuclear pore complex protein NUP50A [Cucumis sativus] >KGN45347.1 hypothetical p...	[more]

BLAST of Pay0012257 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52380.1	2.4e-84	45.21	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT3G15970.1	3.5e-80	44.01	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 327..450 e-value: 1.2E-17 score: 74.6
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 335..450 e-value: 6.9E-17 score: 61.8
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 327..456 score: 18.106546
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 316..462 e-value: 5.5E-34 score: 119.0
IPR015007	Nuclear pore complex, NUP2/50/61	PFAM	PF08911	NUP50	coord: 12..73 e-value: 7.7E-16 score: 58.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..252
None	No IPR available	PANTHER	PTHR23138:SF142	NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED	coord: 1..466
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..466
None	No IPR available	CDD	cd13169	RanBD_NUP50_plant	coord: 337..454 e-value: 1.18105E-65 score: 204.991
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 327..454

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012257.1	Pay0012257.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity