Pay0011896 (gene) Melon (Payzawat) v1

Overview
NamePay0011896
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLOB domain-containing protein 2
Locationchr11: 11556593 .. 11557309 (+)
RNA-Seq ExpressionPay0011896
SyntenyPay0011896
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGGCACAATAACGGACTTTTGCAGGCAACACCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGTCATGAGACATGTCCGTTGGCACCGTACTTTCCTGCAGATCGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTAAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTGTGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATGCCATGTTTGGGACCGTGGAACAATAATAACAATAATAATAGTAATAATAATACTAACAACAATAATAATAATAATGGTAATTTGATTAATAATGGGAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAACCATTTGTTTAATTACCTTCATGATAATTATGTAAGTGCTATAATTGATTCAAGTCCTTATAGTAATTCTTCCACTTATAATTTACAAAGTCCTGAGAAATTGATGAGATTGCAACAAGATAAAGAGATCACTTCAAGCATGGTTGGGCCACTTCAACAGCAACAGCAGCAGCAGCATCCAACATTTCACCATTGTTTTTAA

mRNA sequence

ATGCAAAGGCACAATAACGGACTTTTGCAGGCAACACCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGTCATGAGACATGTCCGTTGGCACCGTACTTTCCTGCAGATCGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTAAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTGTGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATGCCATGTTTGGGACCGTGGAACAATAATAACAATAATAATAGTAATAATAATACTAACAACAATAATAATAATAATGGTAATTTGATTAATAATGGGAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAACCATTTGTTTAATTACCTTCATGATAATTATGTAAGTGCTATAATTGATTCAAGTCCTTATAGTAATTCTTCCACTTATAATTTACAAAGTCCTGAGAAATTGATGAGATTGCAACAAGATAAAGAGATCACTTCAAGCATGGTTGGGCCACTTCAACAGCAACAGCAGCAGCAGCATCCAACATTTCACCATTGTTTTTAA

Coding sequence (CDS)

ATGCAAAGGCACAATAACGGACTTTTGCAGGCAACACCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGTCATGAGACATGTCCGTTGGCACCGTACTTTCCTGCAGATCGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTAAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTGTGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATGCCATGTTTGGGACCGTGGAACAATAATAACAATAATAATAGTAATAATAATACTAACAACAATAATAATAATAATGGTAATTTGATTAATAATGGGAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAACCATTTGTTTAATTACCTTCATGATAATTATGTAAGTGCTATAATTGATTCAAGTCCTTATAGTAATTCTTCCACTTATAATTTACAAAGTCCTGAGAAATTGATGAGATTGCAACAAGATAAAGAGATCACTTCAAGCATGGTTGGGCCACTTCAACAGCAACAGCAGCAGCAGCATCCAACATTTCACCATTGTTTTTAA

Protein sequence

MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF
Homology
BLAST of Pay0011896 vs. ExPASy Swiss-Prot
Match: Q9LNB9 (LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 0

Query: 14  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGLGYKPIMPCLGPWN 133
           L WEA+ RQ DPVLG YGEY+R+ EE+K+ K L  NQ ++                  W+
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQPLIG-----------------WD 143

Query: 134 NNN---NNNSNNN-----TNNNNNNNGNLINNGNGI-MGIINGGVNSNHL 175
           NN    NNNSNN      TN++ +   ++ NNG G+   I+NGG  S ++
Sbjct: 144 NNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNV 176

BLAST of Pay0011896 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 42/88 (47.73%), Postives = 65/88 (73.86%), Query Frame = 0

Query: 14  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACAACK+QR+KC   C LAPYFP DR+R+F   HK+FGVSN+TK++K++   +K  A+ +
Sbjct: 36  ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHT 95

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEVK 102
           +++++  R NDPV G YG  K++  +++
Sbjct: 96  IMFQSDARANDPVDGCYGIIKKLQYQIE 123

BLAST of Pay0011896 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18
Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +T ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  +  A
Sbjct: 10  STTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIA 69

Query: 71  VDSLIWEAVCRQNDPVLGPY--------------GEYKRVLEEVKVCKLLTQNQ 111
           +++LI+ A  R  DPV G Y               E     +++ +C+ L Q Q
Sbjct: 70  MENLIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQ 123

BLAST of Pay0011896 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 0

Query: 15  CAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CA+CK  R++C + C  APYFP D   +F  VHKVFG SNV+KM++ +    +  AV+SL
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 75  IWEAVCRQNDPVLGPYG------------EYKRVLEEVKVCKLLTQNQSIVNGG----QV 134
           ++EA  R  DPV G  G            + +  + + ++  +  QN+  +       ++
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVLEL 128

Query: 135 GLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNG 159
              +K ++        NNNN +N NTNNNNNN G  +++G
Sbjct: 129 DQDHKALL-------LNNNNINNCNTNNNNNNFGYAMSSG 161

BLAST of Pay0011896 vs. ExPASy Swiss-Prot
Match: Q9SCS4 (LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.6e-11
Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +TP CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    +  A
Sbjct: 10  STP-CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFA 69

Query: 71  VDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGLGYKPIMPCLG 130
           +D+L WEA  + NDPV G  G    +L ++K    L +  +IV      L    I+P   
Sbjct: 70  MDTLAWEAQVQANDPVNGCLGIIYNLLSQIKD---LEEQLAIVKN---ELASYCIVPTFV 129

Query: 131 PWNNNNNNNSNNN----TNNNNNNNGNL 155
           P  +  N   +NN      +  NN G L
Sbjct: 130 PPPSMTNLEMHNNPMMIPEHTPNNGGCL 150

BLAST of Pay0011896 vs. ExPASy TrEMBL
Match: A0A5D3CE97 (LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00180 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSI+NGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180
           GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD
Sbjct: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180

Query: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 239
           NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF
Sbjct: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 238

BLAST of Pay0011896 vs. ExPASy TrEMBL
Match: A0A1S4E1K1 (LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSI+NGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180
           GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD
Sbjct: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180

Query: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 239
           NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF
Sbjct: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 238

BLAST of Pay0011896 vs. ExPASy TrEMBL
Match: A0A6J1CHJ9 (LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.6e-92
Identity = 186/240 (77.50%), Postives = 199/240 (82.92%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHNN  LQ   ACAACKHQRKKCH+TCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREED+RKAVDSLIWEAVCRQNDPVLGPYGEY+RVLEE+KVCKLL+QNQS   G     
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQS--QGQNPFA 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGI-INGGVNSNHLFNYLH 180
           GYKPIMPC G WNN  N+ +               NNGNGIMGI INGGVNS++LFNYLH
Sbjct: 121 GYKPIMPCFGGWNNGTNSTN---------------NNGNGIMGININGGVNSSNLFNYLH 180

Query: 181 DNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQ-QQQQHPTFHHCF 239
           DN +SAIIDSS YSNSSTYNLQSPEKL+RLQQDKEITSS+V PLQQQ QQQQHP FH  +
Sbjct: 181 DN-LSAIIDSSHYSNSSTYNLQSPEKLIRLQQDKEITSSVVVPLQQQVQQQQHPNFHQLY 222

BLAST of Pay0011896 vs. ExPASy TrEMBL
Match: A0A6J1I7L7 (LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.5e-84
Identity = 175/248 (70.56%), Postives = 192/248 (77.42%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHN G LQ  PACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNG---GQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 VGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNY 180
           VGL      PC G                     G++ NNGNGIMG+INGGVN +HLFNY
Sbjct: 121 VGL------PCFG---------------------GSISNNGNGIMGLINGGVNGSHLFNY 180

Query: 181 LHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQD-KEITSSMVGPL------QQQQQQQ 239
           LHDN +SAIIDSSPY+NSSTYNLQSPEKLMRL QD KEI+S++V P       QQQQ QQ
Sbjct: 181 LHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQ 219

BLAST of Pay0011896 vs. ExPASy TrEMBL
Match: A0A6J1G604 (LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 174/250 (69.60%), Postives = 191/250 (76.40%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHN G LQ  PACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNG---GQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 VGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNY 180
           VGL      PC G                     G + NNGNGI+G+INGGVN +HLFNY
Sbjct: 121 VGL------PCFG---------------------GTISNNGNGIVGLINGGVNGSHLFNY 180

Query: 181 LHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQD-KEITSSMVGPL--------QQQQQ 239
           LHDN +SAIIDSSPY+NSSTYNLQSPEKLMRL QD KEI+S++V P         QQ Q 
Sbjct: 181 LHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPPQQQQHQH 221

BLAST of Pay0011896 vs. NCBI nr
Match: XP_016901865.1 (PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSI+NGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180
           GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD
Sbjct: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180

Query: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 239
           NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF
Sbjct: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 238

BLAST of Pay0011896 vs. NCBI nr
Match: XP_031737200.1 (LOB domain-containing protein 2 [Cucumis sativus] >KAE8652276.1 hypothetical protein Csa_022532 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 9.5e-116
Identity = 215/238 (90.34%), Postives = 225/238 (94.54%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQ TPACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSI+NGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180
           GYKPI+PCLG WNNNNNNNSN+N NNN N NGNLINNGNGIMGIINGGVNS+HL NY HD
Sbjct: 121 GYKPIIPCLGAWNNNNNNNSNDNNNNNGNGNGNLINNGNGIMGIINGGVNSSHLLNYFHD 180

Query: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 239
           NYVSAI+DSSPYSNSS YNLQS EKLMRLQQDKEI+S+MV PL   QQQQHPTFHHCF
Sbjct: 181 NYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL---QQQQHPTFHHCF 235

BLAST of Pay0011896 vs. NCBI nr
Match: XP_038900978.1 (LOB domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 425.2 bits (1092), Expect = 3.6e-115
Identity = 216/238 (90.76%), Postives = 225/238 (94.54%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHNNG+LQ TPACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGVLQVTPACAACKHQRKKCHETCPLAPYFPANRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREEDKRKAVDSL+WEAVCRQNDPVLGPYGEYKRVLEE+KVCKLLTQNQSI+NGGQV L
Sbjct: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIMNGGQVEL 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLHD 180
           GYKPIMPCLG WNNNNNN      N NNN + NLINNGNGIMGIINGGVNSNHLF+YLHD
Sbjct: 121 GYKPIMPCLGGWNNNNNNK-----NINNNASENLINNGNGIMGIINGGVNSNHLFSYLHD 180

Query: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHPTFHHCF 239
           NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEI+SS+V PLQQQQQQQHPTFHHCF
Sbjct: 181 NYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQHPTFHHCF 233

BLAST of Pay0011896 vs. NCBI nr
Match: XP_022140622.1 (LOB domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 347.4 bits (890), Expect = 9.5e-92
Identity = 186/240 (77.50%), Postives = 199/240 (82.92%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHNN  LQ   ACAACKHQRKKCH+TCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGL 120
           NVREED+RKAVDSLIWEAVCRQNDPVLGPYGEY+RVLEE+KVCKLL+QNQS   G     
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQS--QGQNPFA 120

Query: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGI-INGGVNSNHLFNYLH 180
           GYKPIMPC G WNN  N+ +               NNGNGIMGI INGGVNS++LFNYLH
Sbjct: 121 GYKPIMPCFGGWNNGTNSTN---------------NNGNGIMGININGGVNSSNLFNYLH 180

Query: 181 DNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQ-QQQQHPTFHHCF 239
           DN +SAIIDSS YSNSSTYNLQSPEKL+RLQQDKEITSS+V PLQQQ QQQQHP FH  +
Sbjct: 181 DN-LSAIIDSSHYSNSSTYNLQSPEKLIRLQQDKEITSSVVVPLQQQVQQQQHPNFHQLY 222

BLAST of Pay0011896 vs. NCBI nr
Match: XP_023533791.1 (LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.3 bits (830), Expect = 8.6e-85
Identity = 177/252 (70.24%), Postives = 193/252 (76.59%), Query Frame = 0

Query: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQRHN G LQ  PACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNG---GQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 VGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNY 180
           VGL      PC G                     G++ NNGNGIMG+INGGVN  HLFNY
Sbjct: 121 VGL------PCFG---------------------GSISNNGNGIMGLINGGVNGTHLFNY 180

Query: 181 LHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQD-KEITSSMVGPLQ----------QQ 239
           LHDN +SAIIDSSPY+NSSTYNLQSPEKLMRLQQD KEI+S++V P Q          QQ
Sbjct: 181 LHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLQQDHKEISSTIVVPFQPPPPQQQQQHQQ 223

BLAST of Pay0011896 vs. TAIR 10
Match: AT1G06280.1 (LOB domain-containing protein 2 )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 0

Query: 14  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGLGYKPIMPCLGPWN 133
           L WEA+ RQ DPVLG YGEY+R+ EE+K+ K L  NQ ++                  W+
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQPLIG-----------------WD 143

Query: 134 NNN---NNNSNNN-----TNNNNNNNGNLINNGNGI-MGIINGGVNSNHL 175
           NN    NNNSNN      TN++ +   ++ NNG G+   I+NGG  S ++
Sbjct: 144 NNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNV 176

BLAST of Pay0011896 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20
Identity = 42/88 (47.73%), Postives = 65/88 (73.86%), Query Frame = 0

Query: 14  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACAACK+QR+KC   C LAPYFP DR+R+F   HK+FGVSN+TK++K++   +K  A+ +
Sbjct: 36  ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHT 95

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEVK 102
           +++++  R NDPV G YG  K++  +++
Sbjct: 96  IMFQSDARANDPVDGCYGIIKKLQYQIE 123

BLAST of Pay0011896 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 )

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +T ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  +  A
Sbjct: 10  STTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIA 69

Query: 71  VDSLIWEAVCRQNDPVLGPY--------------GEYKRVLEEVKVCKLLTQNQ 111
           +++LI+ A  R  DPV G Y               E     +++ +C+ L Q Q
Sbjct: 70  MENLIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQ 123

BLAST of Pay0011896 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13
Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 0

Query: 15  CAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CA+CK  R++C + C  APYFP D   +F  VHKVFG SNV+KM++ +    +  AV+SL
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 75  IWEAVCRQNDPVLGPYG------------EYKRVLEEVKVCKLLTQNQSIVNGG----QV 134
           ++EA  R  DPV G  G            + +  + + ++  +  QN+  +       ++
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVLEL 128

Query: 135 GLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNG 159
              +K ++        NNNN +N NTNNNNNN G  +++G
Sbjct: 129 DQDHKALL-------LNNNNINNCNTNNNNNNFGYAMSSG 161

BLAST of Pay0011896 vs. TAIR 10
Match: AT3G50510.1 (LOB domain-containing protein 28 )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +TP CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    +  A
Sbjct: 10  STP-CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFA 69

Query: 71  VDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIVNGGQVGLGYKPIMPCLG 130
           +D+L WEA  + NDPV G  G    +L ++K    L +  +IV      L    I+P   
Sbjct: 70  MDTLAWEAQVQANDPVNGCLGIIYNLLSQIKD---LEEQLAIVKN---ELASYCIVPTFV 129

Query: 131 PWNNNNNNNSNNN----TNNNNNNNGNL 155
           P  +  N   +NN      +  NN G L
Sbjct: 130 PPPSMTNLEMHNNPMMIPEHTPNNGGCL 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNB91.5e-3150.59LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=... [more]
Q9LRW13.8e-1947.73LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S... [more]
Q9SSM91.9e-1842.11LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=... [more]
Q8LBW32.0e-1234.38LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SCS46.6e-1137.16LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A5D3CE977.3e-13099.58LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S4E1K17.3e-13099.58LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=... [more]
A0A6J1CHJ94.6e-9277.50LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 P... [more]
A0A6J1I7L73.5e-8470.56LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3... [more]
A0A6J1G6041.0e-8369.60LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE... [more]
Match NameE-valueIdentityDescription
XP_016901865.11.5e-12999.58PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain... [more]
XP_031737200.19.5e-11690.34LOB domain-containing protein 2 [Cucumis sativus] >KAE8652276.1 hypothetical pro... [more]
XP_038900978.13.6e-11590.76LOB domain-containing protein 2 [Benincasa hispida][more]
XP_022140622.19.5e-9277.50LOB domain-containing protein 2 [Momordica charantia][more]
XP_023533791.18.6e-8570.24LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G06280.11.1e-3250.59LOB domain-containing protein 2 [more]
AT3G13850.12.7e-2047.73LOB domain-containing protein 22 [more]
AT1G72980.11.4e-1942.11LOB domain-containing protein 7 [more]
AT2G30130.11.5e-1334.38Lateral organ boundaries (LOB) domain family protein [more]
AT3G50510.14.7e-1237.16LOB domain-containing protein 28 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 14..103
e-value: 1.6E-32
score: 112.0
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 13..113
score: 22.734152
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 10..229
NoneNo IPR availablePANTHERPTHR31301:SF135LOB DOMAIN-CONTAINING PROTEIN 2coord: 10..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0011896.1Pay0011896.1mRNA