Pay0010944 (gene) Melon (Payzawat) v1

Overview


Name	Pay0010944
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribosome hibernation promotion factor
Location	chr11: 38745 .. 43173 (-)
RNA-Seq Expression	Pay0010944
Synteny	Pay0010944

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTACATACCCTCTTGCTTAAAAAAAAAAGTTACATACCCTCTTGCTTAAAAAAAAAAAGTTATATACCCTCTTTGACAAATATCAAAGGAGAAAAAGACAAAAACTGACATTGGCTTCCCATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGGTTGTTTATCCACTTGTTTCCCTTATTATCCTCATCGATTCCAAGTTTTGAACTCAACAATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTATCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGGTATTTTAGCTTCATCTTTGTTCTACAAGTTTTTCTTTTCATCTGTCTTCCTACTATGCTTAATTGTTCGAGTCTTTGGCATTTTCTATTTCTTCTCAAGTTTGATTCAGTAATTATTATCATAATGAATAGTTGTCACTTGGTTCCCCCACAAAACTCTACGTCTACCTGTTTGATACCCCATTCTCTATTATTCCAATCACCATATCCCTTCACTCAAACCCTAATTTTATTTTCTCCAAGTAAGTCTGCTAATTTCTGTCTCATTTCTTCAAATATCTTCCATATCAACCATTCATGTCCCTTCTCCATTTGTTACTCTTCACACCCCTTTGAAGTGAACGCATCGCATAAGGATTTCGCTATCATTTTTCAGAATCTCCTAATTTCTCATCCAATTTTGATATTCTATATTTCCACTTATTGCAGCTAGAAGATTGTTCTTTGGGTCAAAGAATCGGGTGCATTCACTTTCTTCTATATCGGCATCTTAACTTACTGGTTGACTCAAAAGCTTAACTTGATGCATTTGAGGAGAAAATAAAGAAGCCATGGTTTAAACTCAGATTCCTCTAGATGAGATACCATCTTAAATCACCCATTGAGCCAAAAGTTTAACTTGTTGATGGGTGACATCAAACTTAATATTATATCATCTAAGGCAATATCTGAACCAAATTTATTCTTCTGTGCATTCTCATCAAACACAACCATTTTCTTTCATGATTATCACGTTCCAGGAAACACACAATGCCTACTTCACACTTCCCAATTTCAACCCTTATCTGCTCAAGGGAATCCTTTGTAAAATTGGATCACGATTTCTATAGGCCTCAATCTTTTTCACTTAATCCGAGCCACACAACTCAAGCTGTATCATCCTGCTTAGTTCTTGAACATGATACACACAGCCAAAGCAGTCAACACATGTAATAAAAGACTGCTGCCTCTAAATTTTGTTTGGCCCTATATGTCTACCCCTAGTTATTGAAGTATTAGGATTATTATTATGGTTATTAGAAGGGGCATTCTAGTAATTATCAAGTAAGTTTCTTAGGACCTTTAGTTAAAAATAAATGGAGTTGGTTGGTAGCAAGGTGTGGGTAGCAAGGTGTGGATCATTTTTATAGGAATTTCCATTGTGGGAATTTAAGGAAGTGTAGCCCTTTTGAAAGGCGTGGTATTCTAGTTTTTTCATTGATATTGCATTATAATCTTTTAGTGTTCATTGTTCTTGAGTGTTCTTATTTGGTGATAACCCATTCACACCTTAATCAAGATGATAGGGCTTTGACACCAGACATTAGGAATATGGTCTTGAAGAAATATAAGTGAGAGAAATATACTATTGAAAACGTGCAAAAAAATGATATGATAACAAAGTTTAATAAGGTGCTCATCACACTGAACTTGCCTACTAGATGCAGATAAAGAAATTATCTACTAATACTTGCTACTTTAATGGTTGAAACTCTGTTGCTTCAAGTGACAAGATCACCTACTAACTGTAAATTCTAATATCTATTTCTAGATATTATCCAAGTTTCAGTTACCTAATTTATGGTAACTCAATGTTTAAATTTTATTTTTTTGTTTGCCCTTGAATTCCTATTCCTTCTCAATGAAAGCAGTTTGTTTCATAAAAAAAATGTTTAAATTTTAATACATCAAACATTGAGTGGATTTATTTTTAATTGTGCGAAAAAACTAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGGTACTCTATTGCTCCTTTATTTTAAATTTATCCATATGAATTGAACCCTCGTTCTTTTCCAAAAATGTTTGTGTTTATATAGGCTACTTTATTCACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAGGAAGATGGTGGAGAAGTTATTGACGAGGTTATTCCTTCAACCTTTGGGTTTTTACTTTTTCATTTTTCTGTATAGCATATACTAAACATTTAAGGTGATATTACCTTGTAAGCTCATGTATGCCATGCCTGTTAATTATTTTTCTACACGCCAAAGCTTATTACTAGTGTTAGAATTACTAAACCACATCTTTTCTCATTTAGTTATTGAAATCCTTGTATTCTAAGTTAAAAGAAACCACATCAATTTCGTAGTTTATTTTCTTGTTCCTTTCCAGTGATTAATATTGGAAAATTCTAGATGCAGTACTCAGTTTATTTGAACCATGTGCAATAATTTACTCCTTGCGTAGGAGTGAAGAATGGAAAGAAATGCATTCTCAATCTTGATTTCCTCCCTCTGATGTGCTATTTTCAACTGAATTTGGCTCAAACTCATCCTATTTTTATTTACATTATAGGATTGATAAGCCAGCTTATTTCATAACATGATATCCTAGATGAACATTGAAACATTGGAAGTTGGACCTTACAACTGTAAGATAGCATAGTTCGTAGGAGTCCGTTATCTGTTATTTCTCACTAAGCTGACATGTGCAACTGTTATTTTATTGATCCTTTTCTCTTAATTTTTGTTGTCCATTCCGATGTACTTGATCGTTATAGCTTTTTATTTACTTACTGTTTATTTTGTTTACCTTCACTTTTGGTTGGAAGAAGCACTTTTGATGTTCATCCTTTTTAGATGACGATCATGTGTCATAAACTGGAAGCTCGTGAACATTATGCAGACGTGGATAAGATATTAAATTTTCCTTTTCATGCCAGCAATATTATTCTTTGGTATCTCATTACTCATTTTTATCTTGATTTCAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGCGTTGGTTTGATTATTACAATAATGTTGTTTTGTTGGGACTCTACCGTTTATATCTTAGCTTATGTCTTTATCTTTGGCTTAGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGATGGGCCTTGGCGGAATGATGGGAATTGACGGAGGAAGTTTCACGTTCAGGATAGTTTACCACTGTTACCTTTGCTTAAAACTTCAAAACTTCAACTTCAACATGCATCTGAAGGCGTTTCTTGTAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGAAGATAATATTGGAACAAGAAATGAGTAATAAGTAAAATAAGATGCAAAATATTCTAACGAATGAATGATTCAGCTTGCTGGGGTGTTACCATGAAAGTATATTCTAATGAAGAAATGATTCAACATTCATCTGAAATCTATTACCATCAACGGCCAGAAACCAAAAACTGACGAGGATCACCCCTAGTTTCTTAGTTATTATGAGATAATTTTCAAAAACAAAAGTTATTATTTTTATATTTGTTTTAGTTTTCAAAATATGTATTGTTAAACGAGAAATGTTGAATCATAGAAATTAAGATTATTTCTGTTTTGACTAATTAAAAGTTGTATGTATCTTGAATGAAAATTGAAGTAATAAATTGATAAATTTTAGTGAAAATTATATTGA

mRNA sequence

AAGTTACATACCCTCTTGCTTAAAAAAAAAAGTTACATACCCTCTTGCTTAAAAAAAAAAAGTTATATACCCTCTTTGACAAATATCAAAGGAGAAAAAGACAAAAACTGACATTGGCTTCCCATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGGTTGTTTATCCACTTGTTTCCCTTATTATCCTCATCGATTCCAAGTTTTGAACTCAACAATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTATCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGGCTACTTTATTCACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAGGAAGATGGTGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGATGGGCCTTGGCGGAATGATGGGAATTGACGGAGGAAGTTTCACGTTCAGGATAGTTTACCACTGTTACCTTTGCTTAAAACTTCAAAACTTCAACTTCAACATGCATCTGAAGGCGTTTCTTGTAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGAAGATAATATTGGAACAAGAAATGAGTAATAAGTAAAATAAGATGCAAAATATTCTAACGAATGAATGATTCAGCTTGCTGGGGTGTTACCATGAAAGTATATTCTAATGAAGAAATGATTCAACATTCATCTGAAATCTATTACCATCAACGGCCAGAAACCAAAAACTGACGAGGATCACCCCTAGTTTCTTAGTTATTATGAGATAATTTTCAAAAACAAAAGTTATTATTTTTATATTTGTTTTAGTTTTCAAAATATGTATTGTTAAACGAGAAATGTTGAATCATAGAAATTAAGATTATTTCTGTTTTGACTAATTAAAAGTTGTATGTATCTTGAATGAAAATTGAAGTAATAAATTGATAAATTTTAGTGAAAATTATATTGA

Coding sequence (CDS)

ATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTATCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGGCTACTTTATTCACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAGGAAGATGGTGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGA

Protein sequence

MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE

Homology

[Close]

BLAST of Pay0010944 vs. ExPASy Swiss-Prot
Match: P19954 (Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP1 PE=1 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 7.3e-87
Identity = 169/272 (62.13%), Postives = 211/272 (77.57%), Query Frame = 0


Query: 47  LSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVK 106
           LSS  S F NSC     +   S     +    + M+WDG LSSVKLI+QG+NLE+++ V+
Sbjct: 32  LSSLRSTFTNSCSLGLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVR 91

Query: 107 KHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAE 166
            HVE+KVGK+V KHSHLVREVDVRLS RGG+  KG ++RRCE TLFTK+HGV+RAEEDAE
Sbjct: 92  SHVEDKVGKSVAKHSHLVREVDVRLSARGGDLSKGPKLRRCEVTLFTKRHGVIRAEEDAE 151

Query: 167 TVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEE--EEV---- 226
           ++++SIDLVSSIIQRKLRKIK+K SD GRH+KGF+RSKVR+P P+ +  EE  EEV    
Sbjct: 152 SLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREEVLEEVESAP 211

Query: 227 --FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKD 286
                +  + I+E+VRTKYFDMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+
Sbjct: 212 APVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKE 271

Query: 287 GGYGLIIPKENGTAEKLEPVTVEAAREPSLAE 311
           GGYGLIIPK+ G  EKLE + V+  ++PS AE
Sbjct: 272 GGYGLIIPKD-GKTEKLESLPVQTDKQPSFAE 302

[Close]

BLAST of Pay0010944 vs. ExPASy Swiss-Prot
Match: P74518 (Ribosome hibernation promotion factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=hpf PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33
Identity = 86/203 (42.36%), Postives = 131/203 (64.53%), Query Frame = 0


Query: 90  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRI---RR 149
           +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    +
Sbjct: 1   MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSV-----ARNARITNKHK 60

Query: 150 CEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR-HVKGFDRSKV 209
            E T++     V+RA+E +E ++ASIDLV+  I R+LRK KE+  D+   +VK    S++
Sbjct: 61  AEVTVYA-NGTVIRAQEGSENLYASIDLVADKIARQLRKYKERIQDKQHGNVK---TSEI 120

Query: 210 REPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNE 269
            E  P+     EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN+
Sbjct: 121 VEDKPV-----EENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNK 180

Query: 270 ETGEINILYKRKDGGYGLIIPKE 289
           +T EIN++Y R  GGYG+I P +
Sbjct: 181 DTDEINVIYIRNHGGYGVIQPHQ 189

[Close]

BLAST of Pay0010944 vs. ExPASy Swiss-Prot
Match: P47908 (Ribosome hibernation promotion factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=hpf PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 79/198 (39.90%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 90  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEA 149
           +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + E 
Sbjct: 1   MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANN--ARITDKHKAEV 60

Query: 150 TLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA 209
           T++     V+RA+E +E ++ASIDLVS  I R+LRK KEK+  +  HV    + K  E  
Sbjct: 61  TVYA-NGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHV----QEKTSEVL 120

Query: 210 PIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGE 269
           P   +   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  
Sbjct: 121 P--EDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNA 180

Query: 270 INILYKRKDGGYGLIIPK 288
           IN++Y R  GGYG+I P+
Sbjct: 181 INVIYIRNHGGYGVIQPR 189

[Close]

BLAST of Pay0010944 vs. ExPASy Swiss-Prot
Match: Q9RVE7 (Ribosome hibernation promotion factor OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=hpf PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.5e-19
Identity = 63/194 (32.47%), Postives = 111/194 (57.22%), Query Frame = 0


Query: 94  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFT 153
           + G+N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +    +R  R E  L  
Sbjct: 6   LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR--DVRNNERRNRVEVQL-N 65

Query: 154 KKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KDSDRGRHVKGFDRSKVREPAP 213
              G++RAEE    ++A+ID  S +++R+LRK K    K    GR         +  PA 
Sbjct: 66  VPGGIIRAEEHHADMYAAIDKASDVLERQLRKFKTRYMKQRQEGR------PEPLPGPAE 125

Query: 214 IVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEI 273
             V  +      +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+ 
Sbjct: 126 AEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDLQ-GQT 185

Query: 274 NILYKRKDGGYGLI 285
            ++Y+R+DG YGLI
Sbjct: 186 GVVYRRRDGHYGLI 188

[Close]

BLAST of Pay0010944 vs. ExPASy Swiss-Prot
Match: P47995 (Ribosome hibernation promotion factor OS=Staphylococcus carnosus (strain TM300) OX=396513 GN=hpf PE=3 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 6.5e-19
Identity = 63/200 (31.50%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 90  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEA 149
           ++  + G NL +T+A++ ++E+KVGK ++++   V  V+  + V+           + E 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVK----TYANSSTKIEV 61

Query: 150 TLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA 209
           T+       +RAEE  + ++A IDL+++ ++R++RK K + + + R      +    EP 
Sbjct: 62  TI-PLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRVNRKKR------KESEHEPF 121

Query: 210 PIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGE 269
           P   E   E     D  + I EI+R+K F + P+  EEA+ Q+  + HDF+ F + ET  
Sbjct: 122 PATPETPPETAVDHDKDDEI-EIIRSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDG 181

Query: 270 INILYKRKDGGYGLIIPKEN 290
            +I+Y+RKDG YGLI   EN
Sbjct: 182 TSIVYRRKDGKYGLIETVEN 188

[Close]

BLAST of Pay0010944 vs. ExPASy TrEMBL
Match: A0A5D3BQR1 (Ribosome-binding factor PSRP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00050 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSL PPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120
           FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120

Query: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180
           SHLVREVDVRLSVRGGEFGKGQRIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQ
Sbjct: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180

Query: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240
           RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM
Sbjct: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240

Query: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300
           PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Sbjct: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300

Query: 301 EAAREPSLAE 311
           EAAREPSLAE
Sbjct: 301 EAAREPSLAE 310

[Close]

BLAST of Pay0010944 vs. ExPASy TrEMBL
Match: A0A1S3CCT7 (ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499579 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSL PPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120
           FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120

Query: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180
           SHLVREVDVRLSVRGGEFGKGQRIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQ
Sbjct: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180

Query: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240
           RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM
Sbjct: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240

Query: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300
           PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Sbjct: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300

Query: 301 EAAREPSLAE 311
           EAAREPSLAE
Sbjct: 301 EAAREPSLAE 310

[Close]

BLAST of Pay0010944 vs. ExPASy TrEMBL
Match: A0A6J1E3S3 (ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430564 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 4.0e-136
Identity = 268/317 (84.54%), Postives = 281/317 (88.64%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAF 60
           MA LTSSMQ NLLS HSL+P     SSSTVS FP  FSL    + + LK HALSS+ASAF
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSSSSTVSTFPTSFSLPTSTNSAVLKTHALSSHASAF 60

Query: 61  FNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKV 120
           FNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLELTEAVKKHVEEKV
Sbjct: 61  FNSCNHCFRTIVVAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV 120

Query: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASID 180
           GKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASID
Sbjct: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASID 180

Query: 181 LVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIV 240
           LVSSI+QRKLRKIKEKDSD GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIV
Sbjct: 181 LVSSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIV 240

Query: 241 RTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE 300
           RTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Sbjct: 241 RTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEDGNAE 300

Query: 301 KLEPVTVEAAREPSLAE 311
           K+E VTVE ARE SLAE
Sbjct: 301 KIETVTVEVAREASLAE 317

[Close]

BLAST of Pay0010944 vs. ExPASy TrEMBL
Match: A0A6J1CJG5 (ribosome-binding factor PSRP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011561 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.4e-135
Identity = 269/316 (85.13%), Postives = 278/316 (87.97%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFN 60
           MATLTSSM  NLLS  S      SSST S FPA FSL    + SALK+H LSS+ S FFN
Sbjct: 1   MATLTSSMHTNLLSAPS------SSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFN 60

Query: 61  SCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKA 120
           SC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQGKNLELTEAVKKHVEEKVGKA
Sbjct: 61  SCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKA 120

Query: 121 VQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVS 180
           VQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVR EEDAETV+ASIDLVS
Sbjct: 121 VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVS 180

Query: 181 SIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVR 240
           SIIQRKLRKIKEKDSDRGRH+KGFDR KVREPAPIVVED  EEEEV  ED GEVIDEIVR
Sbjct: 181 SIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVR 240

Query: 241 TKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK 300
           TKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Sbjct: 241 TKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK 300

Query: 301 LEPVTVEAAREPSLAE 311
           LEPVTVE AREPSLAE
Sbjct: 301 LEPVTVEPAREPSLAE 310

[Close]

BLAST of Pay0010944 vs. ExPASy TrEMBL
Match: A0A6J1J523 (ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482691 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 8.6e-131
Identity = 257/306 (83.99%), Postives = 270/306 (88.24%), Query Frame = 0


Query: 10  ANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTI 69
           A+L    S S    SSSTVS FP  FSL    + + LK+HALSS+ASAFFNSC + F TI
Sbjct: 18  ASLFWFSSSSSSSSSSSTVSTFPTSFSLPTSTNSAVLKIHALSSHASAFFNSCNHCFRTI 77

Query: 70  ETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLV 129
             A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLV
Sbjct: 78  VIAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLV 137

Query: 130 REVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLR 189
           REVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLR
Sbjct: 138 REVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIMQRKLR 197

Query: 190 KIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLT 249
           KIKEKDSD GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLT
Sbjct: 198 KIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIVRTKYFDMPPLT 257

Query: 250 VEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAR 309
           VEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE AR
Sbjct: 258 VEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGNAEKIETVTVEVAR 317

Query: 310 EPSLAE 311
           E SLAE
Sbjct: 318 EASLAE 323

[Close]

BLAST of Pay0010944 vs. NCBI nr
Match: XP_008460813.1 (PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo] >TYK02023.1 ribosome-binding factor PSRP1 [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.5e-166
Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSL PPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120
           FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120

Query: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180
           SHLVREVDVRLSVRGGEFGKGQRIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQ
Sbjct: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180

Query: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240
           RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM
Sbjct: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240

Query: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300
           PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Sbjct: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300

Query: 301 EAAREPSLAE 311
           EAAREPSLAE
Sbjct: 301 EAAREPSLAE 310

[Close]

BLAST of Pay0010944 vs. NCBI nr
Match: XP_004147328.1 (ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus] >KAE8651998.1 hypothetical protein Csa_016934 [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 3.3e-161
Identity = 302/310 (97.42%), Postives = 303/310 (97.74%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSLSPP  SSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLSPPFHSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120
           FGTIETASRNRHASNSFSIRMTWDG LSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKH 120

Query: 121 SHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180
           SHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQ
Sbjct: 121 SHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQ 180

Query: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240
           RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM
Sbjct: 181 RKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDM 240

Query: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV 300
           PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVT+
Sbjct: 241 PPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTI 300

Query: 301 EAAREPSLAE 311
           EA REPSLAE
Sbjct: 301 EATREPSLAE 310

[Close]

BLAST of Pay0010944 vs. NCBI nr
Match: XP_038900446.1 (ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida])

HSP 1 Score: 518.1 bits (1333), Expect = 5.3e-143
Identity = 276/313 (88.18%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSL-SPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNS 60
           MA LTSSM  +LL DHSL S    SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNS
Sbjct: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60

Query: 61  CKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAV 120
           CK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ KNLELTEAVKKHVEEKVGKAV
Sbjct: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120

Query: 121 QKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSS 180
           QKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSS
Sbjct: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180

Query: 181 IIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKY 240
           IIQRKLRKIKEKDSDRGRH+KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KY
Sbjct: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDEIVRRKY 240

Query: 241 FDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP 300
           FDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Sbjct: 241 FDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLES 300

Query: 301 VTVEAAREPSLAE 311
           VT++AAREPSLAE
Sbjct: 301 VTIDAAREPSLAE 312

[Close]

BLAST of Pay0010944 vs. NCBI nr
Match: XP_023551717.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.8 bits (1283), Expect = 3.3e-137
Identity = 267/315 (84.76%), Postives = 282/315 (89.52%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFN 60
           MA LTSSMQ NLLS HSL+P   SS+TVS FP  FSL    + + LK+HALSS+ASAFFN
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSTTVSTFPTSFSLPTSTNSAVLKIHALSSHASAFFN 60

Query: 61  SCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGK 120
           SC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLELTEAVKKHVEEKVGK
Sbjct: 61  SCNHCFRTIVIAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGK 120

Query: 121 AVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLV 180
           AVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLV
Sbjct: 121 AVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLV 180

Query: 181 SSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRT 240
           SSI+QRKLRKIKEKDSD GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRT
Sbjct: 181 SSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIVRT 240

Query: 241 KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL 300
           KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AEK+
Sbjct: 241 KYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEDGNAEKI 300

Query: 301 EPVTVEAAREPSLAE 311
           E VTVE ARE SLAE
Sbjct: 301 ETVTVEVAREASLAE 315

[Close]

BLAST of Pay0010944 vs. NCBI nr
Match: XP_022922607.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 494.2 bits (1271), Expect = 8.2e-136
Identity = 268/317 (84.54%), Postives = 281/317 (88.64%), Query Frame = 0


Query: 1   MATLTSSMQANLLSDHSLSP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAF 60
           MA LTSSMQ NLLS HSL+P     SSSTVS FP  FSL    + + LK HALSS+ASAF
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSSSSTVSTFPTSFSLPTSTNSAVLKTHALSSHASAF 60

Query: 61  FNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKV 120
           FNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLELTEAVKKHVEEKV
Sbjct: 61  FNSCNHCFRTIVVAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV 120

Query: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASID 180
           GKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASID
Sbjct: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASID 180

Query: 181 LVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIV 240
           LVSSI+QRKLRKIKEKDSD GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIV
Sbjct: 181 LVSSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIV 240

Query: 241 RTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE 300
           RTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Sbjct: 241 RTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEDGNAE 300

Query: 301 KLEPVTVEAAREPSLAE 311
           K+E VTVE ARE SLAE
Sbjct: 301 KIETVTVEVAREASLAE 317

[Close]

BLAST of Pay0010944 vs. TAIR 10
Match: AT5G24490.1 (30S ribosomal protein, putative )

HSP 1 Score: 341.3 bits (874), Expect = 8.3e-94
Identity = 176/248 (70.97%), Postives = 209/248 (84.27%), Query Frame = 0


Query: 69  RNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVD 128
           R+ +  +S +++M+WDG L+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVD
Sbjct: 61  RHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVD 120

Query: 129 VRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE 188
           VRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+A IDLVS+IIQRKLRKIKE
Sbjct: 121 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKE 180

Query: 189 KDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPP 248
           KDSD GRH+KGF+R KVREP    VVED E+        +E+  ++I EIVRTK F+MPP
Sbjct: 181 KDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPP 240

Query: 249 LTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEA 308
           LTV EA+EQL+ + HDFYGF+NEETGEINI+YKRK+GGYGLIIPK++G AEK+EP+  E 
Sbjct: 241 LTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQ 300

Query: 309 AREPSLAE 311
             E S AE
Sbjct: 301 LNEHSFAE 308

The following BLAST results are available for this feature:

BLAST of Pay0010944 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19954	7.3e-87	62.13	Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSR...	[more]
P74518	1.2e-33	42.36	Ribosome hibernation promotion factor OS=Synechocystis sp. (strain PCC 6803 / Ka...	[more]
P47908	1.3e-30	39.90	Ribosome hibernation promotion factor OS=Synechococcus sp. (strain ATCC 27264 / ...	[more]
Q9RVE7	6.5e-19	32.47	Ribosome hibernation promotion factor OS=Deinococcus radiodurans (strain ATCC 13...	[more]
P47995	6.5e-19	31.50	Ribosome hibernation promotion factor OS=Staphylococcus carnosus (strain TM300) ...	[more]

BLAST of Pay0010944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQR1	2.2e-166	99.35	Ribosome-binding factor PSRP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CCT7	2.2e-166	99.35	ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1E3S3	4.0e-136	84.54	ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CJG5	3.4e-135	85.13	ribosome-binding factor PSRP1, chloroplastic OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1J523	8.6e-131	83.99	ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Pay0010944 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460813.1	4.5e-166	99.35	PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo] >TYK02023...	[more]
XP_004147328.1	3.3e-161	97.42	ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus] >KAE8651998.1 hyp...	[more]
XP_038900446.1	5.3e-143	88.18	ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida]	[more]
XP_023551717.1	3.3e-137	84.76	ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022922607.1	8.2e-136	84.54	ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]	[more]

BLAST of Pay0010944 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24490.1	8.3e-94	70.97	30S ribosomal protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003489	Ribosome hibernation promoting factor/RaiA	PFAM	PF02482	Ribosomal_S30AE	coord: 93..189 e-value: 4.8E-21 score: 75.3
IPR003489	Ribosome hibernation promoting factor/RaiA	TIGRFAM	TIGR00741	TIGR00741	coord: 91..193 e-value: 5.2E-18 score: 63.4
IPR003489	Ribosome hibernation promoting factor/RaiA	CDD	cd00552	RaiA	coord: 91..189 e-value: 8.3169E-24 score: 91.0373
IPR032528	Sigma 54 modulation/S30EA ribosomal protein, C-terminal	PFAM	PF16321	Ribosom_S30AE_C	coord: 230..283 e-value: 4.4E-26 score: 90.3
IPR038416	Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily	GENE3D	3.30.505.50		coord: 242..294 e-value: 1.4E-21 score: 77.7
IPR036567	Ribosome hibernation promotion factor-like	GENE3D	3.30.160.100		coord: 91..200 e-value: 5.4E-20 score: 73.6
IPR036567	Ribosome hibernation promotion factor-like	SUPERFAMILY	69754	Ribosome binding protein Y (YfiA homologue)	coord: 91..196
None	No IPR available	PANTHER	PTHR33231	30S RIBOSOMAL PROTEIN	coord: 75..290
None	No IPR available	PANTHER	PTHR33231:SF1	30S RIBOSOMAL PROTEIN	coord: 75..290
IPR034694	Ribosome hibernation promoting factor, long/plastid	HAMAP	MF_00839	HPF	coord: 90..287 score: 20.032423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0010944.1	Pay0010944.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045900	negative regulation of translational elongation
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0043024	ribosomal small subunit binding
molecular_function	GO:0043022	ribosome binding