Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCGCTCATCGTAGCCACGTGGCTCCGTCCTCTTTAAATAAATAAATTCCCAATTCTTTTCTTCTCTATTTCCAAAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCGGAACACCACAATCCCCAACCACCTTTCTTCGATCAAATCCTCCCTCCACGTCTCGAAGACGCCGGCCTCGAGGATCCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCTTCCGCCGTCAAATCCAGGGCCACCGCCCTTCTTTCTCCCTCCGACGACGATGAAGATGACTCATGGTCCCCTACTTCCACACTACCAACCGATATCGTCACCGGAATCTTGCCGGACGAGGACGCTCCGGCGATACGCGCGACGAGGAAGGGATTGAAATTGCCCGAATTTGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGCTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCGAGAAGGAGAAGAAGAGCGGCAAAGAGGAGGAGAAACCTATCTTAGGTGAAGGTTTTGCTTGAAATTGTGTAGATGAATTTAGGTCAAAATTAGAACGGGGGTGGGTTGTGCTTGAAAATTTCTTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTATTGATTTTGTTTTTCCGATCATAGACCATAGTGAGGTTTAGTAATTTCTTAGGTTTCAAATTAAAATTTGAACATTCCTAACTATAATCACCTAAATAAATATTTAAAAATTACACTTCAT
mRNA sequence
GTCCGCTCATCGTAGCCACGTGGCTCCGTCCTCTTTAAATAAATAAATTCCCAATTCTTTTCTTCTCTATTTCCAAAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCGGAACACCACAATCCCCAACCACCTTTCTTCGATCAAATCCTCCCTCCACGTCTCGAAGACGCCGGCCTCGAGGATCCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCTTCCGCCGTCAAATCCAGGGCCACCGCCCTTCTTTCTCCCTCCGACGACGATGAAGATGACTCATGGTCCCCTACTTCCACACTACCAACCGATATCGTCACCGGAATCTTGCCGGACGAGGACGCTCCGGCGATACGCGCGACGAGGAAGGGATTGAAATTGCCCGAATTTGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGCTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCGAGAAGGAGAAGAAGAGCGGCAAAGAGGAGGAGAAACCTATCTTAGGTGAAGGTTTTGCTTGAAATTGTGTAGATGAATTTAGGTCAAAATTAGAACGGGGGTGGGTTGTGCTTGAAAATTTCTTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTATTGATTTTGTTTTTCCGATCATAGACCATAGTGAGGTTTAGTAATTTCTTAGGTTTCAAATTAAAATTTGAACATTCCTAACTATAATCACCTAAATAAATATTTAAAAATTACACTTCAT
Coding sequence (CDS)
ATGGATGCAGCGGAACACCACAATCCCCAACCACCTTTCTTCGATCAAATCCTCCCTCCACGTCTCGAAGACGCCGGCCTCGAGGATCCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCTTCCGCCGTCAAATCCAGGGCCACCGCCCTTCTTTCTCCCTCCGACGACGATGAAGATGACTCATGGTCCCCTACTTCCACACTACCAACCGATATCGTCACCGGAATCTTGCCGGACGAGGACGCTCCGGCGATACGCGCGACGAGGAAGGGATTGAAATTGCCCGAATTTGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGCTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCGAGAAGGAGAAGAAGAGCGGCAAAGAGGAGGAGAAACCTATCTTAGGTGAAGGTTTTGCTTGA
Protein sequence
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSDDDEDDSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Homology
BLAST of Pay0010487 vs. ExPASy TrEMBL
Match:
A0A5A7U9B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001030 PE=4 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 9.3e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSP D
Sbjct: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
Query: 61 DDEDDSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
DDEDD WSPTSTLPTDIVTGILPDEDAPAI ATRKGLKLPEFGKDEVVIGGMEERRGKAC
Sbjct: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154
BLAST of Pay0010487 vs. ExPASy TrEMBL
Match:
A0A1S3BI85 (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 9.3e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSP D
Sbjct: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
Query: 61 DDEDDSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
DDEDD WSPTSTLPTDIVTGILPDEDAPAI ATRKGLKLPEFGKDEVVIGGMEERRGKAC
Sbjct: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154
BLAST of Pay0010487 vs. ExPASy TrEMBL
Match:
A0A0A0LDD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 127/156 (81.41%), Postives = 134/156 (85.90%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAEHHNPQP FF QILPPRLEDAGLED ALPPDSIREAFFKAASAVKSRATA LS SD
Sbjct: 1 MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60
Query: 61 DDEDD-SWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKA 120
D++DD SPTS LPT DEDAPAI AT+KGL+LPEFGKDEVVIGGMEERRGK
Sbjct: 61 DEDDDVPCSPTSALPT--------DEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKG 120
Query: 121 CVVDGLEGLEIGDEAEKEKKSGKEE-EKPILGEGFA 155
CVVDGLEGLEIGD+AEKE SGKEE +KP+LGEGFA
Sbjct: 121 CVVDGLEGLEIGDDAEKE--SGKEEKKKPVLGEGFA 146
BLAST of Pay0010487 vs. ExPASy TrEMBL
Match:
A0A6J1GBZ4 (uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC111452587 PE=4 SV=1)
HSP 1 Score: 224.9 bits (572), Expect = 2.2e-55
Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS SD
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLS-SD 60
Query: 61 DDED-------DSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGME 120
D ED D+WSPT++LPTD+VTGILP+ D PA AT KGLKLPEF D VV+GGME
Sbjct: 61 DGEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGME 120
Query: 121 ERRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
ERRGK CVVD LEGLE+GDEA+K+KKSG+EEE+PIL EGFA
Sbjct: 121 ERRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160
BLAST of Pay0010487 vs. ExPASy TrEMBL
Match:
A0A6J1K989 (uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831 PE=4 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44
Identity = 100/146 (68.49%), Postives = 112/146 (76.71%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSI EAFFKAASA+KS AT LS +
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSICEAFFKAASAIKSTATGFLSSDE 60
Query: 61 DDE------DDSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEE 120
D+ +D WSPT+ L TD+VTGI P+ D PA AT KGLKLPEF D VV+GGMEE
Sbjct: 61 GDDSDGYGVEDKWSPTAALSTDVVTGIWPELDPPAACATDKGLKLPEFDLDGVVVGGMEE 120
Query: 121 RRGKACVVDGLEGLEIGDEAEKEKKS 141
RRGK C VD LEGLE+GDEA+K+KKS
Sbjct: 121 RRGKGCAVDVLEGLEVGDEAKKKKKS 146
BLAST of Pay0010487 vs. NCBI nr
Match:
XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 uncharacterized protein E6C27_scaffold404G00370 [Cucumis melo var. makuwa] >TYK08560.1 uncharacterized protein E5676_scaffold323G001030 [Cucumis melo var. makuwa])
HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSP D
Sbjct: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
Query: 61 DDEDDSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
DDEDD WSPTSTLPTDIVTGILPDEDAPAI ATRKGLKLPEFGKDEVVIGGMEERRGKAC
Sbjct: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154
BLAST of Pay0010487 vs. NCBI nr
Match:
XP_038900451.1 (uncharacterized protein LOC120087668 [Benincasa hispida])
HSP 1 Score: 250.8 bits (639), Expect = 7.9e-63
Identity = 135/154 (87.66%), Postives = 137/154 (88.96%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAE HNP P FDQILPPRLEDAGLED ALPPDSIREAFFKAASAVKS ATALLSPSD
Sbjct: 1 MDAAEQHNPNPGIFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAVKSTATALLSPSD 60
Query: 61 DDEDDSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
D DD WSPTSTLPTD+VTGILPD D PA+ AT KGLKLPE G DEVVIGGMEERRGKAC
Sbjct: 61 D--DDPWSPTSTLPTDVVTGILPDRDDPAVCATEKGLKLPEIGGDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEA KEKKSGK EEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEA-KEKKSGK-EEKPILGEGFA 150
BLAST of Pay0010487 vs. NCBI nr
Match:
XP_011651498.1 (uncharacterized protein LOC105434906 [Cucumis sativus])
HSP 1 Score: 228.8 bits (582), Expect = 3.2e-56
Identity = 127/156 (81.41%), Postives = 134/156 (85.90%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAEHHNPQP FF QILPPRLEDAGLED ALPPDSIREAFFKAASAVKSRATA LS SD
Sbjct: 1 MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60
Query: 61 DDEDD-SWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGMEERRGKA 120
D++DD SPTS LPT DEDAPAI AT+KGL+LPEFGKDEVVIGGMEERRGK
Sbjct: 61 DEDDDVPCSPTSALPT--------DEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKG 120
Query: 121 CVVDGLEGLEIGDEAEKEKKSGKEE-EKPILGEGFA 155
CVVDGLEGLEIGD+AEKE SGKEE +KP+LGEGFA
Sbjct: 121 CVVDGLEGLEIGDDAEKE--SGKEEKKKPVLGEGFA 146
BLAST of Pay0010487 vs. NCBI nr
Match:
XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothetical protein SDJN02_00096, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 224.9 bits (572), Expect = 4.6e-55
Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS SD
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLS-SD 60
Query: 61 DDED-------DSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGME 120
D ED D+WSPT++LPTD+VTGILP+ D PA AT KGLKLPEF D VV+GGME
Sbjct: 61 DGEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGME 120
Query: 121 ERRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
ERRGK CVVD LEGLE+GDEA+K+KKSG+EEE+PIL EGFA
Sbjct: 121 ERRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160
BLAST of Pay0010487 vs. NCBI nr
Match:
KAG6606765.1 (hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 119/161 (73.91%), Postives = 132/161 (81.99%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS SD
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLS-SD 60
Query: 61 DDED-------DSWSPTSTLPTDIVTGILPDEDAPAIRATRKGLKLPEFGKDEVVIGGME 120
D ED D+WSPT++LPTD+VTGILP+ D PA AT KGLKLPEF D VV+GGME
Sbjct: 61 DGEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGME 120
Query: 121 ERRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
ERRGK CVVD LEGLE+GDEA+K+K SG+EEE+PIL EGFA
Sbjct: 121 ERRGKGCVVDVLEGLEVGDEAKKKKNSGEEEEQPILAEGFA 160
BLAST of Pay0010487 vs. TAIR 10
Match:
AT1G15230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15
Identity = 69/149 (46.31%), Postives = 85/149 (57.05%), Query Frame = 0
Query: 15 DQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPSDDDEDDSW--SPTST 74
D ILPP L DAGLED ALPP+SI+EAF KAA+AVKSRA ++ D +E+D P
Sbjct: 12 DTILPPALADAGLEDCALPPESIQEAFRKAANAVKSRAASIF---DHEEEDGCLADPIPE 71
Query: 75 LPTDIVTGILPDEDAPAIRATRKGLKLPEFGK--DEVVIGGMEERRGKACVVDGLEGLEI 134
I+ G + D A + KL E + D VV G EE GK+C VDGL+ L++
Sbjct: 72 TADKIIVGGDNERDTGPCLAGKGIEKLAESKQAGDLVVAGEGEE--GKSC-VDGLKDLDV 131
Query: 135 -GDEAEKEKK-----SGKEEEKPILGEGF 154
G E EKK +EE KPIL EGF
Sbjct: 132 EGIERSSEKKDQSDEDEEEEMKPILVEGF 154
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U9B5 | 9.3e-78 | 98.05 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BI85 | 9.3e-78 | 98.05 | uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=... | [more] |
A0A0A0LDD6 | 1.5e-56 | 81.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1 | [more] |
A0A6J1GBZ4 | 2.2e-55 | 74.53 | uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC1114525... | [more] |
A0A6J1K989 | 1.0e-44 | 68.49 | uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831... | [more] |
Match Name | E-value | Identity | Description | |
XP_008447517.1 | 1.9e-77 | 98.05 | PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 unc... | [more] |
XP_038900451.1 | 7.9e-63 | 87.66 | uncharacterized protein LOC120087668 [Benincasa hispida] | [more] |
XP_011651498.1 | 3.2e-56 | 81.41 | uncharacterized protein LOC105434906 [Cucumis sativus] | [more] |
XP_022949149.1 | 4.6e-55 | 74.53 | uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothet... | [more] |
KAG6606765.1 | 1.8e-54 | 73.91 | hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
AT1G15230.1 | 1.3e-15 | 46.31 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |