Pay0010445 (gene) Melon (Payzawat) v1

Overview


Name	Pay0010445
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr10: 24083473 .. 24083850 (+)
RNA-Seq Expression	Pay0010445
Synteny	Pay0010445

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGACATCGGGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAACATTTTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAGCATGTACTTCGTTATCTTCGAGGGAAAATTGATATGAGCTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATCTGATCTACACAAAGTAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGCTATATCTTAG

mRNA sequence

ATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGACATCGGGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAACATTTTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAGCATGTACTTCGTTATCTTCGAGGGAAAATTGATATGAGCTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATCTGATCTACACAAAGTAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGCTATATCTTAG

Coding sequence (CDS)

ATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGACATCGGGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAACATTTTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAGCATGTACTTCGTTATCTTCGAGGGAAAATTGATATGAGCTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATCTGATCTACACAAAGTAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGCTATATCTTAG

Protein sequence

MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS

Homology

[Close]

BLAST of Pay0010445 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.8e-18
Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 27  VPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFY 86
           VPYLSA+GA+MYL   TRPD+  +V +L++++S P   HW  +K VLRYL+      L +
Sbjct: 4   VPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEF 63

Query: 87  SNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS 126
           +      LVGY+DA +  D+   RS +GYLF   G  +S
Sbjct: 64  TRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVS 102

[Close]

BLAST of Pay0010445 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 26   EVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLF 85
            +VPY SA+G+LMY    TRPDI  +V +++R+  +P K HW  VK +LRYLRG     L 
Sbjct: 1108 KVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLC 1167

Query: 86   YSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS 126
            +   S+  L GY DA    D+   +S TGYLFT  G AIS
Sbjct: 1168 FGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAIS 1206

[Close]

BLAST of Pay0010445 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 19   NEELLGPE----VPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLR 78
            N ELL  +     P  S IG LMY+   TRPD+T +VN+L+RYSS      W  +K VLR
Sbjct: 1167 NYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLR 1226

Query: 79   YLRGKIDMSLFYSNKSNFD--LVGYADAGYLSDLHKVRSQTGYLF 118
            YL+G IDM L +     F+  ++GY D+ +       +S TGYLF
Sbjct: 1227 YLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLF 1271

[Close]

BLAST of Pay0010445 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 29   YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFYSN 88
            Y   +G+L YLA  TRPD++++VN L++Y   PT  HWN +K VLRYL G  D  +F   
Sbjct: 1228 YRGIVGSLQYLA-FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1287

Query: 89   KSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS 126
             +   L  Y+DA +  D     S  GY+   G   IS
Sbjct: 1288 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPIS 1323

[Close]

BLAST of Pay0010445 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 29   YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFYSN 88
            Y   +G+L YLA  TRPDI+++VN L+++   PT+ H   +K +LRYL G  +  +F   
Sbjct: 1245 YRGIVGSLQYLA-FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1304

Query: 89   KSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS 126
             +   L  Y+DA +  D     S  GY+   G   IS
Sbjct: 1305 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPIS 1340

[Close]

BLAST of Pay0010445 vs. ExPASy TrEMBL
Match: A0A5D3CGU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00370 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 115/125 (92.00%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           MVVRSLDVKKDIFR REDNEELLGPEVPYL+AIGALMYLANNTRPDI+FSVNLLARYSSS
Sbjct: 11  MVVRSLDVKKDIFRPREDNEELLGPEVPYLNAIGALMYLANNTRPDISFSVNLLARYSSS 70

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PTKRHWN VKHVLRYLRG ID+ LFYSNKSNFDLVGYADAGYLSD  K RSQTGYLFTCG
Sbjct: 71  PTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPRKARSQTGYLFTCG 130

Query: 121 GTAIS 126
           GTAIS
Sbjct: 131 GTAIS 135

[Close]

BLAST of Pay0010445 vs. ExPASy TrEMBL
Match: A0A5D3DD63 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold518G00010 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 115/125 (92.00%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           M+VRSLDVKKDIFR REDNEELLGPEVPYLSAIGALMYLANNTRPDI FSVNLLARYS S
Sbjct: 1   MLVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSYS 60

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PTKRHWNGVKHVLRYLRG IDM LFYSNKSNFDLVGYADAG+LSD HK RSQTGYLFTC 
Sbjct: 61  PTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGHLSDPHKARSQTGYLFTCE 120

Query: 121 GTAIS 126
           GTAIS
Sbjct: 121 GTAIS 125

[Close]

BLAST of Pay0010445 vs. ExPASy TrEMBL
Match: A0A5D3CKU4 (Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.7e-58
Identity = 116/125 (92.80%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           MVVRSLDVKKDIFR REDNEELLGPEVPYLSAIGALM LANNTRPDI FSVNLLARYSSS
Sbjct: 11  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMCLANNTRPDIAFSVNLLARYSSS 70

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PTKRHWNGVKHVLRYLRG IDMSLFYSNKSNFDLVGYADAGYLSD  K RSQ GYLFT G
Sbjct: 71  PTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPDKARSQIGYLFTWG 130

Query: 121 GTAIS 126
           GTAIS
Sbjct: 131 GTAIS 135

[Close]

BLAST of Pay0010445 vs. ExPASy TrEMBL
Match: A0A2N9J4G7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59221 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 106/125 (84.80%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           MVVRSLDVKKD FR +E  EE LGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYSS+
Sbjct: 530 MVVRSLDVKKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSA 589

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PT RHWNGVKHVLRYLRG  DM LFY NKSN  LVGYADAGYLSD HK RSQTGYLFTCG
Sbjct: 590 PTLRHWNGVKHVLRYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCG 649

Query: 121 GTAIS 126
            TAIS
Sbjct: 650 NTAIS 654

[Close]

BLAST of Pay0010445 vs. ExPASy TrEMBL
Match: A0A2N9FK49 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15524 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 106/125 (84.80%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           MVVRSLDVKKD FR +E  EE LGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYSS+
Sbjct: 464 MVVRSLDVKKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSA 523

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PT RHWNGVKHVLRYLRG  DM LFY NKSN  LVGYADAGYLSD HK RSQTGYLFTCG
Sbjct: 524 PTLRHWNGVKHVLRYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCG 583

Query: 121 GTAIS 126
            TAIS
Sbjct: 584 NTAIS 588

[Close]

BLAST of Pay0010445 vs. NCBI nr
Match: KAA0038947.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK11197.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 115/125 (92.00%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           MVVRSLDVKKDIFR REDNEELLGPEVPYL+AIGALMYLANNTRPDI+FSVNLLARYSSS
Sbjct: 11  MVVRSLDVKKDIFRPREDNEELLGPEVPYLNAIGALMYLANNTRPDISFSVNLLARYSSS 70

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PTKRHWN VKHVLRYLRG ID+ LFYSNKSNFDLVGYADAGYLSD  K RSQTGYLFTCG
Sbjct: 71  PTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPRKARSQTGYLFTCG 130

Query: 121 GTAIS 126
           GTAIS
Sbjct: 131 GTAIS 135

[Close]

BLAST of Pay0010445 vs. NCBI nr
Match: TYK21506.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 115/125 (92.00%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           M+VRSLDVKKDIFR REDNEELLGPEVPYLSAIGALMYLANNTRPDI FSVNLLARYS S
Sbjct: 1   MLVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSYS 60

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PTKRHWNGVKHVLRYLRG IDM LFYSNKSNFDLVGYADAG+LSD HK RSQTGYLFTC 
Sbjct: 61  PTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGHLSDPHKARSQTGYLFTCE 120

Query: 121 GTAIS 126
           GTAIS
Sbjct: 121 GTAIS 125

[Close]

BLAST of Pay0010445 vs. NCBI nr
Match: KAA0067250.1 (Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 116/125 (92.80%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
           MVVRSLDVKKDIFR REDNEELLGPEVPYLSAIGALM LANNTRPDI FSVNLLARYSSS
Sbjct: 11  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMCLANNTRPDIAFSVNLLARYSSS 70

Query: 61  PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
           PTKRHWNGVKHVLRYLRG IDMSLFYSNKSNFDLVGYADAGYLSD  K RSQ GYLFT G
Sbjct: 71  PTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPDKARSQIGYLFTWG 130

Query: 121 GTAIS 126
           GTAIS
Sbjct: 131 GTAIS 135

[Close]

BLAST of Pay0010445 vs. NCBI nr
Match: AQY61295.1 (Pol [Coffea arabica])

HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1    MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
            MVVRSLD  KD FR RE+NEE+LGPEVPYLSAIGALMYLAN TRPDI+F+VNLLAR+SSS
Sbjct: 901  MVVRSLDPNKDPFRPREENEEILGPEVPYLSAIGALMYLANCTRPDISFAVNLLARFSSS 960

Query: 61   PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
            PT+RHWNG+KH+ RYL+G ID+ LFYSNKS  +LVGYADAGYLSD HK RSQTGYLFT G
Sbjct: 961  PTRRHWNGIKHIFRYLQGTIDLGLFYSNKSKPELVGYADAGYLSDPHKARSQTGYLFTYG 1020

Query: 121  GTAIS 126
            GTAIS
Sbjct: 1021 GTAIS 1025

[Close]

BLAST of Pay0010445 vs. NCBI nr
Match: AQY61300.1 (Pol [Coffea eugenioides])

HSP 1 Score: 210.3 bits (534), Expect = 9.6e-51
Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1    MVVRSLDVKKDIFRHREDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSS 60
            MVVRSLD  KD FR RE+NEE+LGPEVPYLSAIG LMYLAN TRPDI+F+VNLLAR+SSS
Sbjct: 901  MVVRSLDPNKDPFRPREENEEILGPEVPYLSAIGVLMYLANCTRPDISFAVNLLARFSSS 960

Query: 61   PTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVGYADAGYLSDLHKVRSQTGYLFTCG 120
            PT+RHWNG+KH+ RYL+G ID+ LFYSNKS  +LVGYADAGYLSD HK RSQTGYLFT G
Sbjct: 961  PTRRHWNGIKHIFRYLQGTIDLGLFYSNKSKPELVGYADAGYLSDPHKARSQTGYLFTYG 1020

Query: 121  GTAIS 126
            GTAIS
Sbjct: 1021 GTAIS 1025

[Close]

BLAST of Pay0010445 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 29  YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFYSN 88
           Y   IG LMYL   TR DI+F+VN L+++S +P   H   V  +L Y++G +   LFYS+
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 437

Query: 89  KSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS 126
           ++   L  ++DA + S     RS  GY    G + IS
Sbjct: 438 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLIS 473

[Close]

BLAST of Pay0010445 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 37  MYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFYSNKSNFDLVG 96
           MYL   TRPD+TF+VN L+++SS+        V  VL Y++G +   LFYS  S+  L  
Sbjct: 1   MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 97  YADAGYLSDLHKVRSQTGY 116
           +AD+ + S     RS TG+
Sbjct: 61  FADSDWASCPDTRRSVTGF 78

[Close]

BLAST of Pay0010445 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-09
Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 29  YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGKIDMSLFYSN 88
           + S +GAL YL   TRPDI+++VN++ +    PT   ++ +K VLRY++G I   L+   
Sbjct: 100 FRSIVGALQYL-TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 89  KSNFDLVGYADAGYLSDLHKVRSQTGYLFTCGGTAIS 126
            S  ++  + D+ +       RS TG+    G   IS
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIIS 195

The following BLAST results are available for this feature:

BLAST of Pay0010445 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CV72	3.8e-18	43.43	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P10978	1.9e-17	47.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.4e-15	42.86	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.2e-13	40.21	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.3e-10	36.08	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Pay0010445 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGU0	6.0e-59	92.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DD63	6.0e-59	92.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3CKU4	6.7e-58	92.80	Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1	[more]
A0A2N9J4G7	1.2e-51	84.80	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9FK49	1.2e-51	84.80	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]

BLAST of Pay0010445 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038947.1	1.2e-58	92.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK21506.1	1.2e-58	92.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0067250.1	1.4e-57	92.80	Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa]	[more]
AQY61295.1	3.3e-51	80.80	Pol [Coffea arabica]	[more]
AQY61300.1	9.6e-51	80.00	Pol [Coffea eugenioides]	[more]

BLAST of Pay0010445 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.2e-12	38.14	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	2.5e-09	40.51	Gag-Pol-related retrotransposon family protein	[more]
ATMG00810.1	5.7e-09	32.99	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 25..118
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 25..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0010445.1	Pay0010445.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding