Pay0009421 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009421
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Cytochrome c oxidase
Location	chr04: 498537 .. 500236 (-)
RNA-Seq Expression	Pay0009421
Synteny	Pay0009421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGTCCCAGATAGATCCTCACGACAAGATGAGATCTAGAGACGTAAGCAAGGTGGCACGTGGCGAGCAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTCAAAGCCTCCGCCGCCTTCTTCCACCTCCGTTCCTTCCGCTCAGACCAATGACGACCATCGCCGCAGCGGAAGCGAAGACAAAGACAAAGACAATAAGGTCTCTTTAATTTCCTTCGATAGGTAGAAATTAATGTCTTAGTTTGGATGGTTTAAGAAAGTAAATTTGTTATTTGTAAAATTATTTATTTTCAACTATAGTTTACATGATTTTTCTTTTTATGATGGAAGTGAGAGGTTGGGAATTTTCCAAAAACTAATGAAAATTTAACCCAAAACATAAAGAACTAAACCAAAATATGTCTAATGAACCATAAAGGTACTGGTTATCAACATACTGATGGAGGAGAAAATAATATTATGTTTGTTGATCATATATCTAAATTGCCCTATAAATTTCTAATGTTATATTTTAGAGGGTTAAACACATTTAATCCTAAAGAATAACCAAGAATTTAGTACTTTTACTTCAAAAGTTAGAAGTTAGAATTTTGCTTTTATCCCCCATGGGTTGGTCGCAGTTGATCATTCGTATGCCAAGTGAGTACTGAACTGACTAATGATGTGAAATGATACACGACAAAGATTTATAATACACTATTCTTCTTTTAATTAAAGATGGCAATTCTCATACTTATTTTGGACCAGAGTTATGAACTCTAACCGACTTAAATCATATGATTGAACATAAAAGCTTAAATGGATGGGTTAGTGTAGGTATATTATTCAGTGTAAATATAGTATATGTTTTTTTTTTCTCAATATATCTATGAATTAGTTAGGGAGGCCGTGGGGGATTTGAACTTTCGAATTAATGAAAAGTATCCCTTCACATTATAACATTGCATATAGGTGGTAATGGATGAGGGAGTAGAAACAGCGCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCACGCTATTTGGAATATCATAGGTAAATTGAAATGTACCTAATTGAACACATATATACACATGTTCTTTCGACCATTTGTTTAATTCGCACAAACTCATTTAATAACATATGGGGTTTTCTGTCGTTTAAATCTCAATCCAAACAACTAGACTAACTTGGGACATCTTAGGTGAATTAAAAGGTTTGTAATAACAAATATTTGTTTCATTTAATTCCCAACCATCGATGATACATAAAGAGAATCTTTTCAATTAGAAATGTGTATGAAATTGATTATATTTCTCTCTGATTTTTATTTTTATTAATTTGTACTTCTGTTATGTCATTTTGGCTCGTATTAGGTGCGTACAGAAGAAGGGGGAACACGCACCTGAATGCAAGAAGTTCGCCAACTATTATCGATCTCTATGCCCTGGTGAATGGGTAAGGGGGAAATTTTCAGTACCACAACACTTCACCTAACATCTTCTTTTATTATTCTGACGAGTATAGAGACATAAAAAGAGAGTTCTGCGTATAATATAATAACCCTGTCTATATACATATATATATACACTAAAGTCTAGCTAGTGAATATAATAAGGCCATATCTTTGGTTGGTGTACAGGTTGAGAAATGGAACGAGCAAAGGGAGCTTGGTGTCTTTCCTGGTCCGATCTAA

mRNA sequence

ATGTCGGCGTCCCAGATAGATCCTCACGACAAGATGAGATCTAGAGACGTAAGCAAGGTGGCACGTGGCGAGCAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTCAAAGCCTCCGCCGCCTTCTTCCACCTCCGTTCCTTCCGCTCAGACCAATGACGACCATCGCCGCAGCGGAAGCGAAGACAAAGACAAAGACAATAAGGTGGTAATGGATGAGGGAGTAGAAACAGCGCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCACGCTATTTGGAATATCATAGGTGCGTACAGAAGAAGGGGGAACACGCACCTGAATGCAAGAAGTTCGCCAACTATTATCGATCTCTATGCCCTGGTGAATGGGTTGAGAAATGGAACGAGCAAAGGGAGCTTGGTGTCTTTCCTGGTCCGATCTAA

Coding sequence (CDS)

ATGTCGGCGTCCCAGATAGATCCTCACGACAAGATGAGATCTAGAGACGTAAGCAAGGTGGCACGTGGCGAGCAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTCAAAGCCTCCGCCGCCTTCTTCCACCTCCGTTCCTTCCGCTCAGACCAATGACGACCATCGCCGCAGCGGAAGCGAAGACAAAGACAAAGACAATAAGGTGGTAATGGATGAGGGAGTAGAAACAGCGCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCACGCTATTTGGAATATCATAGGTGCGTACAGAAGAAGGGGGAACACGCACCTGAATGCAAGAAGTTCGCCAACTATTATCGATCTCTATGCCCTGGTGAATGGGTTGAGAAATGGAACGAGCAAAGGGAGCTTGGTGTCTTTCCTGGTCCGATCTAA

Protein sequence

MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWNEQRELGVFPGPI

Homology

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BLAST of Pay0009421 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.3e-29
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 42  PSSTSVPS-----AQTNDDHRRSGSEDKDKDN--KVVMDE-----GVETAPSDLRFPFTN 101
           P ST V S     A+ N +   + +E+ + +N  + V +E      +ETAP+D RFP TN
Sbjct: 73  PESTEVASEAPAAAEDNAEETPAAAEENNDENASEEVAEETPDEIKLETAPADFRFPTTN 132

Query: 102 QTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWNEQRELGVFPGPI 148
           QTRHC+ RY+EYHRCV  KG+ APEC KFA +YRSLCP EWV++WNEQRE G FPGP+
Sbjct: 133 QTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNEQRENGTFPGPL 190

[Close]

BLAST of Pay0009421 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 9.6e-29
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 76  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWN 135
           ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE A EC++FA YYR+LCPGEWV+KWN
Sbjct: 7   LKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVDKWN 66

Query: 136 EQRELGVFPGPI 148
           EQRE G FPGP+
Sbjct: 67  EQRETGTFPGPL 78

[Close]

BLAST of Pay0009421 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.8e-28
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 76  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWN 135
           ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE + +C++FA YYR+LCPGEWV+KWN
Sbjct: 7   LKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVDKWN 66

Query: 136 EQRELGVFPGPI 148
           EQRE G FPGP+
Sbjct: 67  EQRESGTFPGPL 78

[Close]

BLAST of Pay0009421 vs. ExPASy Swiss-Prot
Match: Q9LPJ2 (Putative cytochrome c oxidase subunit 6b-like OS=Arabidopsis thaliana OX=3702 GN=At1g32710 PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60
           MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS  PPP + +   A+  D  R + 
Sbjct: 1   MSSAQMDPHDKMRSRDISKVARGQQAPRPAHTPGTVS--PPPENEATFRAKRGDSGRET- 60

Query: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120
                       D  VE      RFP TN+TRHC+ R+++YH+C++K G  A +C    +
Sbjct: 61  ------------DAAVEE-----RFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRD 113

Query: 121 YYRSLCPGEWVEK 134
           Y RS+CP E V K
Sbjct: 121 YVRSICPEELVSK 113

[Close]

BLAST of Pay0009421 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120
           SE +D++       G  T   D RFP TNQT+HC+  Y++Y RC++ KGE    CK+F +
Sbjct: 2   SEQEDQEAPKQFTFG--TVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWH 61

Query: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 148
            Y+SLCP EWVE+W+EQRE G FP PI
Sbjct: 62  AYQSLCPMEWVERWDEQRENGTFPAPI 86

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BLAST of Pay0009421 vs. ExPASy TrEMBL
Match: A0A5D3E4S8 (Putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004020 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60
           MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG
Sbjct: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60

Query: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120
           SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN
Sbjct: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120

Query: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 148
           YYRSLCPGEWVEKWNEQRELGVFPGPI
Sbjct: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 147

[Close]

BLAST of Pay0009421 vs. ExPASy TrEMBL
Match: A0A1S3CQ05 (putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo OX=3656 GN=LOC103503497 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60
           MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG
Sbjct: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60

Query: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120
           SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN
Sbjct: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120

Query: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 148
           YYRSLCPGEWVEKWNEQRELGVFPGPI
Sbjct: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 147

[Close]

BLAST of Pay0009421 vs. ExPASy TrEMBL
Match: A0A0A0LEH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910720 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQT----NDDH 60
           MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD 
Sbjct: 1   MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDD 60

Query: 61  RRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120
           RR GSE  D+DNKVVMDEGV TAPSD+RFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK
Sbjct: 61  RRRGSE--DRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120

Query: 121 KFANYYRSLCPGEWVEKWNEQRELGVFPGPI 148
           KFA YYRSLCPGEWVEKWNEQRELGVFPGP+
Sbjct: 121 KFAKYYRSLCPGEWVEKWNEQRELGVFPGPM 149

[Close]

BLAST of Pay0009421 vs. ExPASy TrEMBL
Match: A0A6J1F3D0 (cytochrome c oxidase subunit 6b-3-like OS=Cucurbita moschata OX=3662 GN=LOC111439604 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.6e-56
Identity = 109/138 (78.99%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 13  RSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDD---HRRSGSEDKDKDNK 72
           R RD+SKVARGEQAPRP HEYGTVSKPPPPSS+S  SAQTN D    RR G   KDKD+K
Sbjct: 6   RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNSDRRHGG--KDKDSK 65

Query: 73  VVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGE 132
           VV++EGVETAP+D+RFPFTNQTRHCY RYLEYH  +QKKGEHAPEC KFA YYRSLCP E
Sbjct: 66  VVVEEGVETAPNDMRFPFTNQTRHCYTRYLEYHSSLQKKGEHAPECDKFAKYYRSLCPVE 125

Query: 133 WVEKWNEQRELGVFPGPI 148
           W+EKWNEQRELG+FPGPI
Sbjct: 126 WIEKWNEQRELGIFPGPI 141

[Close]

BLAST of Pay0009421 vs. ExPASy TrEMBL
Match: A0A6J1IE20 (cytochrome c oxidase subunit 6b-3-like OS=Cucurbita maxima OX=3661 GN=LOC111471817 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.6e-53
Identity = 105/140 (75.00%), Postives = 116/140 (82.86%), Query Frame = 0


Query: 13  RSRDVSKVARGEQAPRPAHEYGTVSKPPPP-SSTSVPSAQTNDD----HRRSGSEDKDKD 72
           R RD+SKVARGEQAPRP HEYGTVSKPPPP SS+S  SAQTN D    HR  G   KD+ 
Sbjct: 6   RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSSASSAQTNLDGNGNHRHGG---KDEY 65

Query: 73  NKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCP 132
            KVV++EGVETAP+D+RFPFTNQTRHCY RYLEYH C+QKKGEH PEC KFA YYRSLCP
Sbjct: 66  GKVVVEEGVETAPNDMRFPFTNQTRHCYTRYLEYHSCLQKKGEHVPECDKFAKYYRSLCP 125

Query: 133 GEWVEKWNEQRELGVFPGPI 148
            +W+EKWNEQRELG+FPG I
Sbjct: 126 AQWIEKWNEQRELGIFPGSI 142

[Close]

BLAST of Pay0009421 vs. NCBI nr
Match: XP_008465918.1 (PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo] >KAA0038526.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa] >TYK31123.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 2.3e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60
           MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG
Sbjct: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60

Query: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120
           SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN
Sbjct: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120

Query: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 148
           YYRSLCPGEWVEKWNEQRELGVFPGPI
Sbjct: 121 YYRSLCPGEWVEKWNEQRELGVFPGPI 147

[Close]

BLAST of Pay0009421 vs. NCBI nr
Match: XP_031737981.1 (cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 3.4e-71
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQT----NDDH 60
           MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD 
Sbjct: 1   MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDD 60

Query: 61  RRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120
           RR GSE  D+DNKVVMDEGV TAPSD+RFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK
Sbjct: 61  RRRGSE--DRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120

Query: 121 KFANYYRSLCPGEWVEKWNEQRELGVFPGPI 148
           KFA YYRSLCPGEWVEKWNEQRELGVFPGP+
Sbjct: 121 KFAKYYRSLCPGEWVEKWNEQRELGVFPGPM 149

[Close]

BLAST of Pay0009421 vs. NCBI nr
Match: XP_038886888.1 (putative cytochrome c oxidase subunit 6b-like [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 128/151 (84.77%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQT----NDDH 60
           MSA+Q+DPHDKMRSRD+SKV RGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD 
Sbjct: 1   MSAAQVDPHDKMRSRDISKVTRGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDD 60

Query: 61  RRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120
           RR G E  D DNK   DEG+ETAP+DLRFPFTNQTRHCYARYLEYHRCVQK+GEHAPECK
Sbjct: 61  RRRGGE--DTDNK---DEGLETAPNDLRFPFTNQTRHCYARYLEYHRCVQKEGEHAPECK 120

Query: 121 KFANYYRSLCPGEWVEKWNEQRELGVFPGPI 148
           KFA YYRSLCPGEW+EKWNEQRELGVFPGPI
Sbjct: 121 KFAKYYRSLCPGEWIEKWNEQRELGVFPGPI 146

[Close]

BLAST of Pay0009421 vs. NCBI nr
Match: XP_031737980.1 (putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 121/135 (89.63%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQT----NDDH 60
           MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD 
Sbjct: 1   MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNLDGNDDD 60

Query: 61  RRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120
           RR GSE  D+DNKVVMDEGV TAPSD+RFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK
Sbjct: 61  RRRGSE--DRDNKVVMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECK 120

Query: 121 KFANYYRSLCPGEWV 132
           KFA YYRSLCPGEWV
Sbjct: 121 KFAKYYRSLCPGEWV 133

[Close]

BLAST of Pay0009421 vs. NCBI nr
Match: XP_023542925.1 (cytochrome c oxidase subunit 6b-3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 106/138 (76.81%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 13  RSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDD---HRRSGSEDKDKDNK 72
           R RD+SKVARGEQAPRP HEYGTVSKPPPPSS+S  SAQTN D    RR G +D+D    
Sbjct: 6   RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDEDSKVV 65

Query: 73  VVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGE 132
           VV++EGVETAP+D+RFPFTNQTRHCY RYL+YH CV+KKGEHAPEC KFA YYRSLCP E
Sbjct: 66  VVVEEGVETAPNDMRFPFTNQTRHCYTRYLDYHSCVRKKGEHAPECHKFAKYYRSLCPAE 125

Query: 133 WVEKWNEQRELGVFPGPI 148
           W+EKWNEQRELG+FPGPI
Sbjct: 126 WIEKWNEQRELGIFPGPI 143

[Close]

BLAST of Pay0009421 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 129.0 bits (323), Expect = 3.1e-30
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 42  PSSTSVPS-----AQTNDDHRRSGSEDKDKDN--KVVMDE-----GVETAPSDLRFPFTN 101
           P ST V S     A+ N +   + +E+ + +N  + V +E      +ETAP+D RFP TN
Sbjct: 73  PESTEVASEAPAAAEDNAEETPAAAEENNDENASEEVAEETPDEIKLETAPADFRFPTTN 132

Query: 102 QTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWNEQRELGVFPGPI 148
           QTRHC+ RY+EYHRCV  KG+ APEC KFA +YRSLCP EWV++WNEQRE G FPGP+
Sbjct: 133 QTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNEQRENGTFPGPL 190

[Close]

BLAST of Pay0009421 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 127.9 bits (320), Expect = 6.8e-30
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 76  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWN 135
           ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE A EC++FA YYR+LCPGEWV+KWN
Sbjct: 7   LKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVDKWN 66

Query: 136 EQRELGVFPGPI 148
           EQRE G FPGP+
Sbjct: 67  EQRETGTFPGPL 78

[Close]

BLAST of Pay0009421 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.4e-29
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 76  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVEKWN 135
           ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE + +C++FA YYR+LCPGEWV+KWN
Sbjct: 7   LKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVDKWN 66

Query: 136 EQRELGVFPGPI 148
           EQRE G FPGP+
Sbjct: 67  EQRESGTFPGPL 78

[Close]

BLAST of Pay0009421 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 120.9 bits (302), Expect = 8.4e-28
Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVPSAQTNDDHRRSG 60
           MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS  PPP + +   A+  D  R + 
Sbjct: 1   MSSAQMDPHDKMRSRDISKVARGQQAPRPAHTPGTVS--PPPENEATFRAKRGDSGRET- 60

Query: 61  SEDKDKDNKVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN 120
                       D  VE      RFP TN+TRHC+ R+++YH+C++K G  A +C    +
Sbjct: 61  ------------DAAVEE-----RFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRD 113

Query: 121 YYRSLCPGEWVEK 134
           Y RS+CP E V K
Sbjct: 121 YVRSICPEELVSK 113

The following BLAST results are available for this feature:

BLAST of Pay0009421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7L9	4.3e-29	53.39	Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=...	[more]
Q9SUD3	9.6e-29	69.44	Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=...	[more]
Q945L0	4.8e-28	66.67	Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=...	[more]
Q9LPJ2	1.2e-26	48.12	Putative cytochrome c oxidase subunit 6b-like OS=Arabidopsis thaliana OX=3702 GN...	[more]
O94581	3.1e-19	50.57	Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str...	[more]

BLAST of Pay0009421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4S8	1.1e-80	100.00	Putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CQ05	1.1e-80	100.00	putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0LEH8	1.6e-71	90.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910720 PE=4 SV=1	[more]
A0A6J1F3D0	9.6e-56	78.99	cytochrome c oxidase subunit 6b-3-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IE20	7.6e-53	75.00	cytochrome c oxidase subunit 6b-3-like OS=Cucurbita maxima OX=3661 GN=LOC1114718...	[more]

BLAST of Pay0009421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465918.1	2.3e-80	100.00	PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo] >KAA0038...	[more]
XP_031737981.1	3.4e-71	90.07	cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]	[more]
XP_038886888.1	1.9e-66	84.77	putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]	[more]
XP_031737980.1	1.6e-60	89.63	putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]	[more]
XP_023542925.1	2.0e-55	76.81	cytochrome c oxidase subunit 6b-3-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0009421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22450.1	3.1e-30	53.39	cytochrome C oxidase 6B	[more]
AT4G28060.1	6.8e-30	69.44	Cytochrome c oxidase, subunit Vib family protein	[more]
AT5G57815.1	3.4e-29	66.67	Cytochrome c oxidase, subunit Vib family protein	[more]
AT1G32710.1	8.4e-28	48.12	Cytochrome c oxidase, subunit Vib family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003213	Cytochrome c oxidase, subunit VIb	PFAM	PF02297	COX6B	coord: 84..138 e-value: 7.2E-17 score: 61.4
IPR003213	Cytochrome c oxidase, subunit VIb	CDD	cd00926	Cyt_c_Oxidase_VIb	coord: 77..146 e-value: 3.8544E-38 score: 122.417
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	GENE3D	1.10.10.140	Cytochrome c oxidase, subunit VIb	coord: 71..147 e-value: 4.3E-32 score: 111.9
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	SUPERFAMILY	47694	Cytochrome c oxidase subunit h	coord: 76..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..26
None	No IPR available	PANTHER	PTHR46281:SF14	CYTOCHROME C OXIDASE SUBUNIT 6B-1	coord: 5..147
None	No IPR available	PANTHER	PTHR46281	CYTOCHROME C OXIDASE SUBUNIT 6B	coord: 5..147
None	No IPR available	PROSITE	PS51808	CHCH	coord: 91..134 score: 11.440363

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009421.1	Pay0009421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045277	respiratory chain complex IV