Pay0009276 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009276
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr04: 25138644 .. 25140135 (+)
RNA-Seq Expression	Pay0009276
Synteny	Pay0009276

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCTCCCTCTATAATATAAGGCAGTATACATGAGAGCTATGGCTATGGCTATGGCTATTCCCTAGTGAAGAAAAAGGGTTGGTGAATTAGGGTTGTGCCCAGCTAATATCATATCATATCATAAAAATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCAATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCAACAACAACTACTTTTAGGTGAGATTATACTTATTTAAAACCTCTTTATTTCCTTTTCATTTTTGTTTTTTTATTTATTGGTTTCTAAGTTTTGTTTACAACTACACGATTTCAAATGGTTTAAAATCGTGCTTGTTGTCTCTTTGTCCGAAAATATATAGAAAGAGTACTCTTCTTTATCTCCATGGAAGATTAATATTCTTTTTTTGATTAAAATATCATTTTGATCAAATATTTTGAATCTTTTAATATATTTATAATAATTTTGGTTTATTAACTTTTAAAATTATTAATATTTAATATGAGTTTATTATTGTTTATTAAAATAAAGGGGGGGATTTTGTTGATATTTTCTTTATAAATCAATCGAATATATTTACATACTGTGTCTTTTCTATTATAGTTATTATTTAACTAATTTTGATAAGATTTTTAGAAAATAAAATGATCAAAATCCGATAATTAAAAATACATTATGTCATGTAACTATACAAAAATAACATATGGAATTTGATATTATTTTTTATTTCATCATATATGTCTTGACTTTGATACTAACTAACAATTTTTTTGTAGAGGTTTAAAATTAAGGTTCCATTCAATAACTATTTTGTTTATTTATTTTTTCAGAAAGTTCTGCAAAATTAAAATAAAATTATTTCAAACATTTACTTTTGTTATTTAAGATTATGAAATCCGTGAATGATGAGGAATCCTAATAACTAATTAATTAATGGATTAATTTGTTCCTTAATTATTTAATTTTTTCTTTTCTTTTGGGTTTGGAGTGAAAGAAGGCCGCGGCAAAGAAGAGAATAATAAGACGGCGGAGAGTTGGACTGTTTTAAAGGCTAAAGGGGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAATAACATAATGATAATTACCACTTTCCTCCTCTCTTCCTTTTTATACTTGTTTTAAATTTTCTTTTTTTCGTTCATTTCTATATGGAATAATATCAAAACCTATTTATATATACACACACACATACATCTTTTTGTTTGAGTAAATTTTTGTAATCCCAAACTACCTCAATTTATCAATATACACGTGTATATATATACATATATGGATCTTGTTTTAGTTATACAACAATTGGAGTAATAAGATACGAAAAACACATAACAAATTTCATGTTATCAATAC

mRNA sequence

TTAGCTCCCTCTATAATATAAGGCAGTATACATGAGAGCTATGGCTATGGCTATGGCTATTCCCTAGTGAAGAAAAAGGGTTGGTGAATTAGGGTTGTGCCCAGCTAATATCATATCATATCATAAAAATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCAATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCAACAACAACTACTTTTAGTGAAAGAAGGCCGCGGCAAAGAAGAGAATAATAAGACGGCGGAGAGTTGGACTGTTTTAAAGGCTAAAGGGGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAATAACATAATGATAATTACCACTTTCCTCCTCTCTTCCTTTTTATACTTGTTTTAAATTTTCTTTTTTTCGTTCATTTCTATATGGAATAATATCAAAACCTATTTATATATACACACACACATACATCTTTTTGTTTGAGTAAATTTTTGTAATCCCAAACTACCTCAATTTATCAATATACACGTGTATATATATACATATATGGATCTTGTTTTAGTTATACAACAATTGGAGTAATAAGATACGAAAAACACATAACAAATTTCATGTTATCAATAC

Coding sequence (CDS)

ATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCAATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCAACAACAACTACTTTTAGTGAAAGAAGGCCGCGGCAAAGAAGAGAATAATAAGACGGCGGAGAGTTGGACTGTTTTAAAGGCTAAAGGGGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAATAACATAATGATAATTACCACTTTCCTCCTCTCTTCCTTTTTATACTTGTTTTAA

Protein sequence

MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNPPLQTHHQQQLLLVKEGRGKEENNKTAESWTVLKAKGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIMIITTFLLSSFLYLF

Homology

[Close]

BLAST of Pay0009276 vs. ExPASy TrEMBL
Match: A0A0A0LCI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710765 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.2e-45
Identity = 113/125 (90.40%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNPPLQTHH-QQQLLLVKEGRGKE 60
           MGVYACLLISLLLILQTVWISSLSNASNNSF YESLSNPPLQTHH  QQ  LVK G GKE
Sbjct: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQPRLVKGGGGKE 60

Query: 61  ENNKT-AESWTVLKAK-GGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIMIITTFLLSS 120
           ENNKT AESWTV KAK GGRSGAGGAGANNHRPGKAKNAASTLMNSNNNI+IITT LLSS
Sbjct: 61  ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS 120

Query: 121 FLYLF 123
           FLYLF
Sbjct: 121 FLYLF 125

[Close]

BLAST of Pay0009276 vs. NCBI nr
Match: KGN58897.2 (hypothetical protein Csa_001334 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 109/124 (87.90%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNPPLQTHHQQQLLLVKEGRGKEE 60
           MGVYACLLISLLLILQTVWISSLSNASNNSF YESLSNPPLQTHH  Q   +  G GKEE
Sbjct: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQPRL-GGGGKEE 60

Query: 61  NNKT-AESWTVLKAK-GGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIMIITTFLLSSF 120
           NNKT AESWTV KAK GGRSGAGGAGANNHRPGKAKNAASTLMNSNNNI+IITT LLSSF
Sbjct: 61  NNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSSF 120

Query: 121 LYLF 123
           LYLF
Sbjct: 121 LYLF 123

[Close]

BLAST of Pay0009276 vs. NCBI nr
Match: KAG6581619.1 (hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.7 bits (234), Expect = 5.7e-16
Identity = 70/122 (57.38%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNPPLQTHHQQQLLLVKEGRGKEE 60
           MGVYACLLISLLLI QT  ISSLSN S       S ++ PLQ HHQ    L+  GR   E
Sbjct: 1   MGVYACLLISLLLIFQTHSISSLSNGS-LPISNHSFNSQPLQHHHQ----LLVSGRDDGE 60

Query: 61  NNKTAESWTVLKAKGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIMIITTFLLSSFLY 120
            N T     VLKAKGGRSG+ GAG NNHRPGKAKNAA++L   N    II   L S+ L+
Sbjct: 61  ENTTTVKLVVLKAKGGRSGSAGAGTNNHRPGKAKNAAASLFEFN----IIYFVLNSAGLF 113

Query: 121 LF 123
           LF
Sbjct: 121 LF 113

The following BLAST results are available for this feature:

BLAST of Pay0009276 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0009276 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCI5	2.2e-45	90.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710765 PE=4 SV=1	[more]

BLAST of Pay0009276 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58897.2	1.2e-42	87.90	hypothetical protein Csa_001334 [Cucumis sativus]	[more]
KAG6581619.1	5.7e-16	57.38	hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0009276 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009276.1	Pay0009276.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity