Pay0008837 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008837
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	nuclear transcription factor Y subunit B-3-like
Location	chr06: 31891087 .. 31892215 (-)
RNA-Seq Expression	Pay0008837
Synteny	Pay0008837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGAATCAAATTACAATAAATCAAAGATTAGCTTTTGCATAGAGATAATGCATTTTAATTTGGTTAAATTTAATTTGTTATTCAATGATAGCAACTTGGCAACTCTCCCATTCCCATCCTCTCTTACAAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACATTTCACTTCCACATCCCCTAATTTCACAAACCCTAATTCCTCTTCCCCCTCTTCCATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCCCCATCTCCACGTGAACACGACAGACTCCTCCCGATCGCCAACGTCGGCCGGATCATGAAGAAAGCTCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACGAGAAACGAAAAACTATCAACGGCGACGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTGGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATTGAAGGCGAGAGGACAACGCTTGCCTCACGTGACTCCGCCGCCTCCTCCGCTCCGAACTCCGCCGCAGCGGGGAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGGGATGGGGATGGGGATGGGGATGGGGATGGGGATGGGAATGACGATGGCGATGCCTCCGAATGTTTATGGTTCTGATGGGCCGCGTTGGGATGGGCCTGGGTTTAGTACTACGGGTAGGCCCAGGTAGGTGGGCCATATCGACCCATTGGGTTTTTATTGGGCCCAGTACTATACACTGCTACAACTACAACATTCATTACGACGGCGACGGGATATTCGAAATCTCCACTTTATCCTCCGTAAAATGAAGATGTGTAGCTGAGGGAAGGTGACCTTTTTTATTTTTATTTTTATTTTATTTTTTTTTTAATTTTATAAAAAGATATTGTGACGCAGATAAATAATAATAATAACAATAGATGAATTTAATGTTGTATTTTCATTTTAATAAATATGCATTTTATAGTTTTTATAACAATTATAATTATGGTGAATTGTTTTCTCT

mRNA sequence

TTTTGGAATCAAATTACAATAAATCAAAGATTAGCTTTTGCATAGAGATAATGCATTTTAATTTGGTTAAATTTAATTTGTTATTCAATGATAGCAACTTGGCAACTCTCCCATTCCCATCCTCTCTTACAAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACATTTCACTTCCACATCCCCTAATTTCACAAACCCTAATTCCTCTTCCCCCTCTTCCATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCCCCATCTCCACGTGAACACGACAGACTCCTCCCGATCGCCAACGTCGGCCGGATCATGAAGAAAGCTCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACGAGAAACGAAAAACTATCAACGGCGACGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTGGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATTGAAGGCGAGAGGACAACGCTTGCCTCACGTGACTCCGCCGCCTCCTCCGCTCCGAACTCCGCCGCAGCGGGGAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGGGATGGGGATGGGGATGGGGATGGGGATGGGGATGGGAATGACGATGGCGATGCCTCCGAATGTTTATGGTTCTGATGGGCCGCGTTGGGATGGGCCTGGGTTTAGTACTACGGGTAGGCCCAGGTAGGTGGGCCATATCGACCCATTGGGTTTTTATTGGGCCCAGTACTATACACTGCTACAACTACAACATTCATTACGACGGCGACGGGATATTCGAAATCTCCACTTTATCCTCCGTAAAATGAAGATGTGTAGCTGAGGGAAGGTGACCTTTTTTATTTTTATTTTTATTTTATTTTTTTTTTAATTTTATAAAAAGATATTGTGACGCAGATAAATAATAATAATAACAATAGATGAATTTAATGTTGTATTTTCATTTTAATAAATATGCATTTTATAGTTTTTATAACAATTATAATTATGGTGAATTGTTTTCTCT

Coding sequence (CDS)

ATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCCCCATCTCCACGTGAACACGACAGACTCCTCCCGATCGCCAACGTCGGCCGGATCATGAAGAAAGCTCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACGAGAAACGAAAAACTATCAACGGCGACGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTGGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATTGAAGGCGAGAGGACAACGCTTGCCTCACGTGACTCCGCCGCCTCCTCCGCTCCGAACTCCGCCGCAGCGGGGAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGGGATGGGGATGGGGATGGGGATGGGGATGGGGATGGGAATGACGATGGCGATGCCTCCGAATGTTTATGGTTCTGATGGGCCGCGTTGGGATGGGCCTGGGTTTAGTACTACGGGTAGGCCCAGGTAG

Protein sequence

MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGPGFSTTGRPR

Homology

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BLAST of Pay0008837 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50
Identity = 119/196 (60.71%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 1   MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQ 60
           M DSD DSGGG        Q S SPRE DR LPIANV RIMKKALP NAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE 120
           ECVSEFISFVTGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQRFREIEGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 RTTLASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSD 180
           RT L    +      +   A      DGGG +GGG GM           +    ++YG+ 
Sbjct: 121 RTGLGRPQTGGEVGEHQRDAVG----DGGGFYGGGGGMQYHQ---HHQFLHQQNHMYGAT 180

Query: 181 GPRWDGPGFSTTGRPR 190
           G   D  G + +GR R
Sbjct: 181 GGGSDSGGGAASGRTR 189

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BLAST of Pay0008837 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-48
Identity = 106/155 (68.39%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 1   MADSDNDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEF 60
           MADSDNDSGG     + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEF
Sbjct: 1   MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60

Query: 61  ISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLAS 120
           ISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQ++RE+EGE+TT A 
Sbjct: 61  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG 120

Query: 121 RDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMG 155
           R            AG+     G   +GGGM   MG
Sbjct: 121 RQGDKEGGGGGGGAGSGS--GGAPMYGGGMVTTMG 153

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BLAST of Pay0008837 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.1e-48
Identity = 114/179 (63.69%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MADSDNDSGGGYQ----KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECV 60
           M DSDNDSGG       +  SPRE DR LPIANV RIMKKALP NAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTT 120
           SEFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYVDPLK YL +FREIEGER  
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAA 120

Query: 121 LASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGP 176
            AS   A +SA ++         +  G + G    G G G   GM M M   +YGS  P
Sbjct: 121 -ASTTGAGTSAASTTPPQQQHTANAAGGYAGYAAPGAGPG---GMMMMMGQPMYGSPPP 175

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BLAST of Pay0008837 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-47
Identity = 109/176 (61.93%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 1   MADSDNDSGG--GYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSE 60
           M DSDN+SGG     +  S RE DR LPIANV RIMK+ALP NAKISKDAKETVQECVSE
Sbjct: 1   MPDSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSE 60

Query: 61  FISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERT--T 120
           FISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDY+DPLKLYL +FRE+EGE+    
Sbjct: 61  FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAIGA 120

Query: 121 LASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGS 173
             S    A+S+  S +   S          GG GM    G G GM M M   +YGS
Sbjct: 121 AGSGGGGAASSGGSGSGSGSHHHQDASRNNGGYGM---YGGGGGMIMMMGQPMYGS 173

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BLAST of Pay0008837 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.0e-40
Identity = 99/181 (54.70%), Postives = 118/181 (65.19%), Query Frame = 0


Query: 2   ADSDNDSGGGYQKSPSP---------REHDRLLPIANVGRIMKKALPGNAKISKDAKETV 61
           A +    GGG  +S SP         RE DR LPIAN+ RIMKKA+P N KI+KDAKETV
Sbjct: 4   APASPGGGGGSHESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETV 63

Query: 62  QECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEG 121
           QECVSEFISF+T EASDKC  EKRKTINGDDLLWAMATLGFEDY++PLK+YLQ++RE+EG
Sbjct: 64  QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEG 123

Query: 122 ERTTLASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGS 174
           + + L ++ S  S   +  A G+ G      E   GMG       GMG    M P  +  
Sbjct: 124 D-SKLTAKSSDGSIKKD--ALGHVGASSSAAE---GMGQQGAYNQGMGY---MQPQYHNG 175

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BLAST of Pay0008837 vs. ExPASy TrEMBL
Match: A0A1S3BL47 (nuclear transcription factor Y subunit B-3-like OS=Cucumis melo OX=3656 GN=LOC103491025 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.3e-101
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP
Sbjct: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180

Query: 181 GFSTTGRPR 190
           GFSTTGRPR
Sbjct: 181 GFSTTGRPR 189

[Close]

BLAST of Pay0008837 vs. ExPASy TrEMBL
Match: A0A5A7VDK6 (Nuclear transcription factor Y subunit B-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00130 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.5e-97
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DSAASSAPNSA AGNSGFFDGGGEFGG    GMGMGMGMGMTMAMPPNVYGSDGPRWDGP
Sbjct: 121 DSAASSAPNSAVAGNSGFFDGGGEFGG----GMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180

Query: 181 GFSTTGRPR 190
           GFSTTGRPR
Sbjct: 181 GFSTTGRPR 185

[Close]

BLAST of Pay0008837 vs. ExPASy TrEMBL
Match: A0A0A0L4U4 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G047800 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 177/189 (93.65%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DS ASSA NSAAAGNSGFFDGGGEFGG      G GMGMGMT  MPPNVYGS+GPRWDGP
Sbjct: 121 DS-ASSAANSAAAGNSGFFDGGGEFGG----AGGSGMGMGMTTTMPPNVYGSNGPRWDGP 180

Query: 181 GFSTTGRPR 190
           GFSTTGRPR
Sbjct: 181 GFSTTGRPR 184

[Close]

BLAST of Pay0008837 vs. ExPASy TrEMBL
Match: A0A6J1HQB9 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111465124 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84
Identity = 166/192 (86.46%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKE VQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKEIVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERT LASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTALASR 120

Query: 121 D---SAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRW 180
           D   SAA++A  +A A NS FFDGGGEFGG          GMGMTM MPPNVYGS+GPRW
Sbjct: 121 DSSSSAAATATAAAGAANSAFFDGGGEFGG----------GMGMTMTMPPNVYGSNGPRW 180

Query: 181 DGPGFSTTGRPR 190
           DGPGF+TTGRPR
Sbjct: 181 DGPGFTTTGRPR 182

[Close]

BLAST of Pay0008837 vs. ExPASy TrEMBL
Match: A0A6J1F1D9 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111438720 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.0e-81
Identity = 165/192 (85.94%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHD LLPIANVGRIMKKALPGNAKISKDAKE VQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDGLLPIANVGRIMKKALPGNAKISKDAKEIVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERT LASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTALASR 120

Query: 121 DSAAS-SAPNSAAAG--NSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRW 180
           DS++S SA  +AAAG  NS FFDGGGEFGGGMG            M MPPNVYGS+GPRW
Sbjct: 121 DSSSSASAVAAAAAGAANSTFFDGGGEFGGGMG------------MTMPPNVYGSNGPRW 180

Query: 181 DGPGFSTTGRPR 190
           DGPGF+TTGRPR
Sbjct: 181 DGPGFTTTGRPR 180

[Close]

BLAST of Pay0008837 vs. NCBI nr
Match: XP_008449032.2 (PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis melo])

HSP 1 Score: 377.1 bits (967), Expect = 8.9e-101
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP
Sbjct: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180

Query: 181 GFSTTGRPR 190
           GFSTTGRPR
Sbjct: 181 GFSTTGRPR 189

[Close]

BLAST of Pay0008837 vs. NCBI nr
Match: KAA0065728.1 (nuclear transcription factor Y subunit B-3-like [Cucumis melo var. makuwa] >TYK13754.1 nuclear transcription factor Y subunit B-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DSAASSAPNSA AGNSGFFDGGGEFGG    GMGMGMGMGMTMAMPPNVYGSDGPRWDGP
Sbjct: 121 DSAASSAPNSAVAGNSGFFDGGGEFGG----GMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180

Query: 181 GFSTTGRPR 190
           GFSTTGRPR
Sbjct: 181 GFSTTGRPR 185

[Close]

BLAST of Pay0008837 vs. NCBI nr
Match: XP_004148262.1 (nuclear transcription factor Y subunit B-3 [Cucumis sativus] >KGN56019.1 hypothetical protein Csa_009503 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90
Identity = 177/189 (93.65%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DS ASSA NSAAAGNSGFFDGGGEFGG      G GMGMGMT  MPPNVYGS+GPRWDGP
Sbjct: 121 DS-ASSAANSAAAGNSGFFDGGGEFGG----AGGSGMGMGMTTTMPPNVYGSNGPRWDGP 180

Query: 181 GFSTTGRPR 190
           GFSTTGRPR
Sbjct: 181 GFSTTGRPR 184

[Close]

BLAST of Pay0008837 vs. NCBI nr
Match: XP_022965194.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 2.6e-84
Identity = 166/192 (86.46%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKE VQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKEIVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERT LASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTALASR 120

Query: 121 D---SAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRW 180
           D   SAA++A  +A A NS FFDGGGEFGG          GMGMTM MPPNVYGS+GPRW
Sbjct: 121 DSSSSAAATATAAAGAANSAFFDGGGEFGG----------GMGMTMTMPPNVYGSNGPRW 180

Query: 181 DGPGFSTTGRPR 190
           DGPGF+TTGRPR
Sbjct: 181 DGPGFTTTGRPR 182

[Close]

BLAST of Pay0008837 vs. NCBI nr
Match: XP_038905070.1 (nuclear transcription factor Y subunit B-3-like [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 165/189 (87.30%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGG QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGCQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEAS+KCHNEKRKTINGDDLLWAMATLGFEDYVDPLK YLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASEKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKFYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSDGPRWDGP 180
           DS A++A NSAAA NS FFDGGGEFG GMGM M           MPPNVYGS+GPRWDGP
Sbjct: 121 DS-ANAAANSAAAANSTFFDGGGEFGDGMGMTM-----------MPPNVYGSNGPRWDGP 177

Query: 181 GFSTTGRPR 190
           GF+TTGRPR
Sbjct: 181 GFTTTGRPR 177

[Close]

BLAST of Pay0008837 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 119/196 (60.71%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 1   MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQ 60
           M DSD DSGGG        Q S SPRE DR LPIANV RIMKKALP NAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE 120
           ECVSEFISFVTGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQRFREIEGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 RTTLASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMGMGMGMGMTMAMPPNVYGSD 180
           RT L    +      +   A      DGGG +GGG GM           +    ++YG+ 
Sbjct: 121 RTGLGRPQTGGEVGEHQRDAVG----DGGGFYGGGGGMQYHQ---HHQFLHQQNHMYGAT 180

Query: 181 GPRWDGPGFSTTGRPR 190
           G   D  G + +GR R
Sbjct: 181 GGGSDSGGGAASGRTR 189

[Close]

BLAST of Pay0008837 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-49
Identity = 106/155 (68.39%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 1   MADSDNDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEF 60
           MADSDNDSGG     + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEF
Sbjct: 1   MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60

Query: 61  ISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLAS 120
           ISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQ++RE+EGE+TT A 
Sbjct: 61  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG 120

Query: 121 RDSAASSAPNSAAAGNSGFFDGGGEFGGGMGMGMG 155
           R            AG+     G   +GGGM   MG
Sbjct: 121 RQGDKEGGGGGGGAGSGS--GGAPMYGGGMVTTMG 153

[Close]

BLAST of Pay0008837 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-41
Identity = 77/96 (80.21%), Postives = 86/96 (89.58%), Query Frame = 0


Query: 19  REHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKT 78
           +E DR LPIANVGRIMKK LPGN KISKDAKETVQECVSEFISFVTGEASDKC  EKRKT
Sbjct: 35  KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94

Query: 79  INGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGER 115
           INGDD++WA+ TLGFEDYV PLK+YL ++R+ EGE+
Sbjct: 95  INGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130

[Close]

BLAST of Pay0008837 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 )

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-41
Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 6   NDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVT 65
           ++SGG    +S   RE DR LPIAN+ RIMK+ LP N KI+KDAKE VQECVSEFISFVT
Sbjct: 15  HESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVT 74

Query: 66  GEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASRDSAA 125
            EASDKC  EKRKTINGDDLLWAMATLGFEDY++PLK+YL R+RE+EG+     ++ SA 
Sbjct: 75  SEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD-----TKGSAK 134

Query: 126 SSAPNSAAAGNS 137
              PN+   G S
Sbjct: 135 GGDPNAKKDGQS 141

[Close]

BLAST of Pay0008837 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 )

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-41
Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 6   NDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVT 65
           ++SGG    +S   RE DR LPIAN+ RIMK+ LP N KI+KDAKE VQECVSEFISFVT
Sbjct: 15  HESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVT 74

Query: 66  GEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASRDSAA 125
            EASDKC  EKRKTINGDDLLWAMATLGFEDY++PLK+YL R+RE+EG+     ++ SA 
Sbjct: 75  SEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD-----TKGSAK 134

Query: 126 SSAPNSAAAGNS 137
              PN+   G S
Sbjct: 135 GGDPNAKKDGQS 141

The following BLAST results are available for this feature:

BLAST of Pay0008837 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGJ3	1.5e-50	60.71	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O23310	2.4e-48	68.39	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q75IZ7	4.1e-48	63.69	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q69J40	4.5e-47	61.93	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
P25209	7.0e-40	54.70	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]

BLAST of Pay0008837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL47	4.3e-101	100.00	nuclear transcription factor Y subunit B-3-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7VDK6	6.5e-97	97.35	Nuclear transcription factor Y subunit B-3-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0L4U4	1.5e-90	93.65	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0478...	[more]
A0A6J1HQB9	1.3e-84	86.46	nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F1D9	1.0e-81	85.94	nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Pay0008837 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449032.2	8.9e-101	100.00	PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis melo]	[more]
KAA0065728.1	1.3e-96	97.35	nuclear transcription factor Y subunit B-3-like [Cucumis melo var. makuwa] >TYK1...	[more]
XP_004148262.1	3.2e-90	93.65	nuclear transcription factor Y subunit B-3 [Cucumis sativus] >KGN56019.1 hypothe...	[more]
XP_022965194.1	2.6e-84	86.46	nuclear transcription factor Y subunit B-3-like [Cucurbita maxima]	[more]
XP_038905070.1	1.1e-82	87.30	nuclear transcription factor Y subunit B-3-like [Benincasa hispida]	[more]

BLAST of Pay0008837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47640.1	1.1e-51	60.71	nuclear factor Y, subunit B2	[more]
AT4G14540.1	1.7e-49	68.39	nuclear factor Y, subunit B3	[more]
AT2G13570.1	2.2e-41	80.21	nuclear factor Y, subunit B7	[more]
AT2G37060.1	6.5e-41	64.39	nuclear factor Y, subunit B8	[more]
AT2G37060.2	6.5e-41	64.39	nuclear factor Y, subunit B8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 52..70 score: 52.03 coord: 90..108 score: 37.44 coord: 71..89 score: 39.11
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..189
None	No IPR available	PANTHER	PTHR11064:SF129	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2	coord: 1..159
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 11..136 e-value: 6.3E-45 score: 154.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..133
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 24..88 e-value: 2.1E-27 score: 95.2
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..159
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 55..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008837.1	Pay0008837.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding